BLASTX nr result
ID: Ophiopogon25_contig00018400
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00018400
(659 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020246712.1| DNA-directed RNA polymerase III subunit RPC6... 229 1e-72
ref|XP_010927732.1| PREDICTED: DNA-directed RNA polymerase III s... 207 9e-64
ref|XP_008813399.1| PREDICTED: DNA-directed RNA polymerase III s... 204 9e-63
ref|XP_009386152.1| PREDICTED: DNA-directed RNA polymerase III s... 181 2e-53
ref|XP_009404340.1| PREDICTED: DNA-directed RNA polymerase III s... 181 2e-53
ref|XP_020691279.1| DNA-directed RNA polymerase III subunit RPC6... 176 6e-52
ref|XP_019705973.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 174 9e-51
ref|XP_020574967.1| DNA-directed RNA polymerase III subunit RPC6... 172 1e-49
ref|XP_021609496.1| DNA-directed RNA polymerase III subunit RPC6... 170 2e-49
ref|XP_021672680.1| DNA-directed RNA polymerase III subunit RPC6... 166 6e-48
ref|XP_021681807.1| DNA-directed RNA polymerase III subunit RPC6... 166 9e-48
ref|XP_006427248.1| DNA-directed RNA polymerase III subunit RPC6... 163 1e-46
ref|XP_012073203.1| DNA-directed RNA polymerase III subunit RPC6... 162 3e-46
ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III s... 161 5e-46
gb|PKA46474.1| hypothetical protein AXF42_Ash012607 [Apostasia s... 160 9e-46
ref|XP_002509507.1| PREDICTED: DNA-directed RNA polymerase III s... 160 1e-45
ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III s... 159 6e-45
ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III s... 159 1e-44
gb|KDO80021.1| hypothetical protein CISIN_1g0254932mg, partial [... 157 2e-44
ref|XP_018829908.1| PREDICTED: DNA-directed RNA polymerase III s... 156 8e-44
>ref|XP_020246712.1| DNA-directed RNA polymerase III subunit RPC6 [Asparagus
officinalis]
ref|XP_020246713.1| DNA-directed RNA polymerase III subunit RPC6 [Asparagus
officinalis]
gb|ONK58492.1| uncharacterized protein A4U43_C09F13600 [Asparagus officinalis]
Length = 231
Score = 229 bits (584), Expect = 1e-72
Identities = 113/166 (68%), Positives = 144/166 (86%), Gaps = 5/166 (3%)
Frame = +1
Query: 175 PDSSPRLPKLTELEFKIYEVIKSKEGSGIWTNDVRKEVIGFPPTAINKALKSLQTKNLIK 354
P +PRLPKL+++E ++Y VIKS++GSGIWTND++KEV+G PPTA+ KALKSL TKNLIK
Sbjct: 2 PPQNPRLPKLSDVESEMYSVIKSRKGSGIWTNDLKKEVMG-PPTAVAKALKSLLTKNLIK 60
Query: 355 EVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQQCRRLMEDLKVATCE 534
EV S+K+K+RK+VM VEFEPS ++SGG WYQ G+LDVAFIKILRQQCRR +E+ KVATCE
Sbjct: 61 EVISIKNKSRKMVMAVEFEPSADVSGGAWYQSGSLDVAFIKILRQQCRRHVEEHKVATCE 120
Query: 535 MIRKSIKDSR-----VFNMDITLQQIYEIVELMVLDKEVDKLKSSG 657
M+RK+IK+ + VF +ITLQQ+YEI+ELMVLDKEV+K++SSG
Sbjct: 121 MVRKAIKEPKRGRPPVFTTEITLQQVYEILELMVLDKEVEKVRSSG 166
>ref|XP_010927732.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Elaeis
guineensis]
ref|XP_010927733.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Elaeis
guineensis]
ref|XP_010927734.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Elaeis
guineensis]
ref|XP_010927735.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Elaeis
guineensis]
Length = 237
Score = 207 bits (526), Expect = 9e-64
Identities = 100/171 (58%), Positives = 134/171 (78%)
Frame = +1
Query: 145 SEMLPQKRPQPDSSPRLPKLTELEFKIYEVIKSKEGSGIWTNDVRKEVIGFPPTAINKAL 324
S MLPQKRP PDS P+LP L+E E +YE+I+SK+ GIWT D+++E G T + K L
Sbjct: 4 SSMLPQKRPHPDSKPKLPALSETERILYELIRSKQNIGIWTADMKRET-GLQTTVVTKTL 62
Query: 325 KSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQQCRRL 504
KSLQ KNLIK+V ++ +K RKI M +EFEPS+EISGG+WY DG+LD+ FI+ILR+QC +
Sbjct: 63 KSLQNKNLIKDVVNIHNKARKIYMAMEFEPSKEISGGSWYSDGSLDIEFIRILREQCLKH 122
Query: 505 MEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 657
+E L++AT E I KSI++SRVF ++ T+QQI EIV MVLDKE+++LKS+G
Sbjct: 123 IERLQIATMEAIYKSIQESRVFKVECTMQQIVEIVNAMVLDKEIEELKSTG 173
>ref|XP_008813399.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Phoenix
dactylifera]
ref|XP_008813400.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Phoenix
dactylifera]
Length = 232
Score = 204 bits (519), Expect = 9e-63
Identities = 102/169 (60%), Positives = 131/169 (77%)
Frame = +1
Query: 151 MLPQKRPQPDSSPRLPKLTELEFKIYEVIKSKEGSGIWTNDVRKEVIGFPPTAINKALKS 330
MLPQKRP PDS +LP L+E E +YE+IKSK+ GIWT D+++E G T + K LKS
Sbjct: 1 MLPQKRPHPDSKTKLPPLSETERVLYELIKSKQNLGIWTADMKRET-GLQTTVVTKTLKS 59
Query: 331 LQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQQCRRLME 510
LQ KNLIK+V ++ +K RKI M VEFEPS+EISGG+WY DG+LD FI+ILR+QC + +E
Sbjct: 60 LQNKNLIKDVVNIHNKARKIYMAVEFEPSKEISGGSWYSDGSLDTDFIRILREQCLKHIE 119
Query: 511 DLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 657
L+VAT E I KSI++SRVF ++ T+QQI EIV MVLDKEV++LKS+G
Sbjct: 120 RLQVATMEAIYKSIQESRVFKVECTMQQIVEIVNAMVLDKEVEELKSTG 168
>ref|XP_009386152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Musa
acuminata subsp. malaccensis]
ref|XP_009386160.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Musa
acuminata subsp. malaccensis]
Length = 237
Score = 181 bits (458), Expect = 2e-53
Identities = 93/169 (55%), Positives = 121/169 (71%)
Frame = +1
Query: 151 MLPQKRPQPDSSPRLPKLTELEFKIYEVIKSKEGSGIWTNDVRKEVIGFPPTAINKALKS 330
M PQKR QPDS + P L E E +YE+IKS++ GIWT D++KE G + KALKS
Sbjct: 6 MTPQKRAQPDSQSQPPALPENERILYELIKSRKNMGIWTADMKKET-GLQNIVVTKALKS 64
Query: 331 LQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQQCRRLME 510
LQ KNLIK+V +V +K RKI M VEFEPS+E+SGG+WY +G+LD FI ILR+ C + +E
Sbjct: 65 LQNKNLIKDVVNVHNKARKIFMAVEFEPSKEVSGGSWYSEGSLDTEFINILRKMCLKHIE 124
Query: 511 DLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 657
+LKVAT E I KSI S V + T+QQ+ EIV + LDKE+++LKS+G
Sbjct: 125 ELKVATIEDIWKSISASGVLKVACTMQQVLEIVRALALDKEIEELKSTG 173
>ref|XP_009404340.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Musa
acuminata subsp. malaccensis]
ref|XP_018684305.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Musa
acuminata subsp. malaccensis]
Length = 237
Score = 181 bits (458), Expect = 2e-53
Identities = 89/169 (52%), Positives = 121/169 (71%)
Frame = +1
Query: 151 MLPQKRPQPDSSPRLPKLTELEFKIYEVIKSKEGSGIWTNDVRKEVIGFPPTAINKALKS 330
M PQKR QPDS + P L E E +YE+IKS++ GIW D+++E G + KALKS
Sbjct: 6 MTPQKRRQPDSQTQPPALPESERIVYELIKSRKNMGIWIADIKREA-GIQNIIVTKALKS 64
Query: 331 LQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQQCRRLME 510
LQ+KNLIK+V +V +K+RK M VEFEPS+E+SGG+WY DG+LD FI ILR C + +E
Sbjct: 65 LQSKNLIKDVVNVHNKSRKTFMAVEFEPSKEVSGGSWYSDGSLDTEFINILRMMCLKHIE 124
Query: 511 DLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 657
DL++AT E I K I SR+ ++ T+QQ+ EIV + LDKE+++LKS+G
Sbjct: 125 DLRIATIEDIHKCIAASRIMKVECTMQQVLEIVRALALDKEIEELKSTG 173
>ref|XP_020691279.1| DNA-directed RNA polymerase III subunit RPC6 [Dendrobium catenatum]
ref|XP_020691280.1| DNA-directed RNA polymerase III subunit RPC6 [Dendrobium catenatum]
gb|PKU75411.1| hypothetical protein MA16_Dca020480 [Dendrobium catenatum]
Length = 231
Score = 176 bits (447), Expect = 6e-52
Identities = 94/168 (55%), Positives = 124/168 (73%)
Frame = +1
Query: 154 LPQKRPQPDSSPRLPKLTELEFKIYEVIKSKEGSGIWTNDVRKEVIGFPPTAINKALKSL 333
LPQKR ++P L E E K+Y++I SKE GIWT D++KE G P A+ KALKSL
Sbjct: 8 LPQKR-------KVPALPENEKKLYDLIWSKETLGIWTADMKKET-GLPNNAVTKALKSL 59
Query: 334 QTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQQCRRLMED 513
Q+K IK+V ++ +K +KI M VEFEPS+EISGGTWY +G+LD+ FI ILR+QCR +E
Sbjct: 60 QSKGFIKDVVNIHNKAKKIYMAVEFEPSKEISGGTWYSEGSLDLEFITILRKQCRLHVER 119
Query: 514 LKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 657
LKVAT E + + I+DS+VF +D +LQQI EI+ MVLDKE+++L SSG
Sbjct: 120 LKVATLENVWQFIRDSKVFYIDFSLQQIKEIMSAMVLDKELEELISSG 167
>ref|XP_019705973.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
subunit rpc6-like [Elaeis guineensis]
Length = 240
Score = 174 bits (440), Expect = 9e-51
Identities = 92/174 (52%), Positives = 122/174 (70%), Gaps = 3/174 (1%)
Frame = +1
Query: 145 SEMLPQKRPQPDSSPRLPKLTELEFKIYEVIKSKEGSGIWTNDVRKEVIGFPPTAINKAL 324
S LPQK+ DS +LP L+E E +Y +IKSK+ GIWT D +++ G T + K L
Sbjct: 4 SPNLPQKQLLRDSKTKLPPLSETERVLYGLIKSKQNLGIWTADTKRDT-GLQTTVVTKTL 62
Query: 325 KSLQTKNLIKEVTSVKH---KTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQQC 495
KSLQ KNLIK+V ++ + K RKI + VEFEP +EISGG+WY DG+LD FI+ILR+QC
Sbjct: 63 KSLQNKNLIKDVVNIHNIHNKARKIYVAVEFEPXKEISGGSWYSDGSLDTDFIRILREQC 122
Query: 496 RRLMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 657
+E +VAT E I KSI++SRVF ++ T+ I EIV MVLDKEV++LKS+G
Sbjct: 123 LNHIERFQVATMEAIYKSIQESRVFKVECTMHHIVEIVNAMVLDKEVEELKSTG 176
>ref|XP_020574967.1| DNA-directed RNA polymerase III subunit RPC6 [Phalaenopsis
equestris]
Length = 282
Score = 172 bits (436), Expect = 1e-49
Identities = 90/168 (53%), Positives = 121/168 (72%)
Frame = +1
Query: 154 LPQKRPQPDSSPRLPKLTELEFKIYEVIKSKEGSGIWTNDVRKEVIGFPPTAINKALKSL 333
LPQKR +LP L E E K++++I SK+ GIWT D++K+ G A+ KALKSL
Sbjct: 59 LPQKR-------KLPPLPENEKKLHDLIWSKQSLGIWTADMKKQT-GLANNAVTKALKSL 110
Query: 334 QTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQQCRRLMED 513
Q+KNLIK+V +V +K RK M VEFEPS+EISGGTWY DG LD+ FI+ILR+QCR +E
Sbjct: 111 QSKNLIKDVVNVHNKARKFFMAVEFEPSKEISGGTWYSDGTLDLEFIRILREQCRMHVER 170
Query: 514 LKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 657
LK+A+ E + K ++DS +F + +LQQI EI+ M LDKE+++L SSG
Sbjct: 171 LKIASVENVWKCVRDSGIFKTECSLQQIQEILVAMYLDKEIEELISSG 218
>ref|XP_021609496.1| DNA-directed RNA polymerase III subunit RPC6 [Manihot esculenta]
gb|OAY52825.1| hypothetical protein MANES_04G114300 [Manihot esculenta]
gb|OAY52826.1| hypothetical protein MANES_04G114300 [Manihot esculenta]
Length = 236
Score = 170 bits (431), Expect = 2e-49
Identities = 89/172 (51%), Positives = 120/172 (69%)
Frame = +1
Query: 142 LSEMLPQKRPQPDSSPRLPKLTELEFKIYEVIKSKEGSGIWTNDVRKEVIGFPPTAINKA 321
+S +L QKR Q DS LTE E +Y VI++K+ GIWT D+++E P +NK+
Sbjct: 1 MSRLLGQKRKQTDSKSPAESLTEQERILYNVIRNKQDMGIWTRDMKRET-SLPDNVVNKS 59
Query: 322 LKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQQCRR 501
LK LQ KNLIKEV ++++K RK M EFEPS+EI+GGTWY +G LD FI+IL++QC +
Sbjct: 60 LKVLQAKNLIKEVVNIQNKGRKHYMATEFEPSKEITGGTWYVEGNLDTEFIQILKEQCTK 119
Query: 502 LMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 657
+ LKVAT E I SIK S V N+++T QQI EIV+ +VLD E+ +LKS+G
Sbjct: 120 QIYKLKVATLEGITDSIKRSGVLNVELTKQQIDEIVKALVLDNEIIELKSNG 171
>ref|XP_021672680.1| DNA-directed RNA polymerase III subunit RPC6-like [Hevea
brasiliensis]
ref|XP_021672688.1| DNA-directed RNA polymerase III subunit RPC6-like [Hevea
brasiliensis]
Length = 236
Score = 166 bits (421), Expect = 6e-48
Identities = 86/172 (50%), Positives = 120/172 (69%)
Frame = +1
Query: 142 LSEMLPQKRPQPDSSPRLPKLTELEFKIYEVIKSKEGSGIWTNDVRKEVIGFPPTAINKA 321
+S + QKR Q DS+ LTE E +Y VI+SK+ GIWT D+++E P +NK+
Sbjct: 1 MSRLHGQKRKQTDSNSPAQSLTEHERVLYNVIRSKQDMGIWTRDMKRET-NLPDNVVNKS 59
Query: 322 LKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQQCRR 501
LK LQ KNLIKEV ++++K RK M +EFEPS+EI+GG WY DG LD FI+IL++QC +
Sbjct: 60 LKVLQAKNLIKEVVNIQNKGRKHYMAMEFEPSKEITGGAWYVDGNLDTEFIQILKEQCTK 119
Query: 502 LMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 657
+ LKVAT E + SI+ S V N+++T QQI EIV+ +VLD E+ ++KS+G
Sbjct: 120 QIYKLKVATLEGVTDSIRRSGVLNVELTKQQIEEIVKALVLDDEIIEVKSNG 171
>ref|XP_021681807.1| DNA-directed RNA polymerase III subunit RPC6-like [Hevea
brasiliensis]
Length = 236
Score = 166 bits (420), Expect = 9e-48
Identities = 86/172 (50%), Positives = 119/172 (69%)
Frame = +1
Query: 142 LSEMLPQKRPQPDSSPRLPKLTELEFKIYEVIKSKEGSGIWTNDVRKEVIGFPPTAINKA 321
+S + QKR Q DS+ LTE E +Y VI+SK+ GIWT D+++E P +NK+
Sbjct: 1 MSRLQGQKRKQTDSNSPAQSLTEQERILYNVIRSKQDMGIWTRDMKRET-NLPDNVVNKS 59
Query: 322 LKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQQCRR 501
LK LQ KNLIKEV ++++K RK M EFEPS+EI+GG WY +G LD FI+IL++QC +
Sbjct: 60 LKVLQAKNLIKEVVNIQNKGRKHYMATEFEPSKEITGGAWYVEGNLDTEFIQILKEQCTK 119
Query: 502 LMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 657
+ LKVAT E + SIK S V N+++T QQI EI++ +VLD E+ +LKS+G
Sbjct: 120 QIYKLKVATLEGVTDSIKRSGVLNVELTKQQIDEILKALVLDNEIIELKSNG 171
>ref|XP_006427248.1| DNA-directed RNA polymerase III subunit RPC6 [Citrus clementina]
ref|XP_024036378.1| DNA-directed RNA polymerase III subunit RPC6 [Citrus clementina]
gb|ESR40488.1| hypothetical protein CICLE_v10026399mg [Citrus clementina]
gb|KDO45213.1| hypothetical protein CISIN_1g026766mg [Citrus sinensis]
gb|KDO45214.1| hypothetical protein CISIN_1g026766mg [Citrus sinensis]
dbj|GAY63105.1| hypothetical protein CUMW_222970 [Citrus unshiu]
Length = 233
Score = 163 bits (412), Expect = 1e-46
Identities = 82/166 (49%), Positives = 117/166 (70%), Gaps = 1/166 (0%)
Frame = +1
Query: 163 KRPQPDSSPRLPKLTELEFKIYEVIKSKEGSGIWTNDVRKEV-IGFPPTAINKALKSLQT 339
KR +PDS+ LT+ E IY+VI+SK+ GIWT D+++E+ + P + K++KSLQ
Sbjct: 3 KRKRPDSNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62
Query: 340 KNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQQCRRLMEDLK 519
K+LIKEV ++ K +K +M VEFEPS+EISGG WY +G+LD FIK+++ QC + + LK
Sbjct: 63 KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLK 122
Query: 520 VATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 657
VAT E I SIK S F +D+T QQI EIV +VLD ++ ++KS+G
Sbjct: 123 VATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNG 168
>ref|XP_012073203.1| DNA-directed RNA polymerase III subunit RPC6 [Jatropha curcas]
ref|XP_020535305.1| DNA-directed RNA polymerase III subunit RPC6 [Jatropha curcas]
ref|XP_020535306.1| DNA-directed RNA polymerase III subunit RPC6 [Jatropha curcas]
dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas]
gb|KDP37096.1| hypothetical protein JCGZ_06152 [Jatropha curcas]
Length = 235
Score = 162 bits (410), Expect = 3e-46
Identities = 82/172 (47%), Positives = 116/172 (67%)
Frame = +1
Query: 142 LSEMLPQKRPQPDSSPRLPKLTELEFKIYEVIKSKEGSGIWTNDVRKEVIGFPPTAINKA 321
+S QKR QP+S+ LTE E +Y I+SK+ GIWT D+++E P T +NK+
Sbjct: 1 MSRFQGQKRKQPESNSSAQSLTEHEQALYNAIRSKQDMGIWTRDMKRET-NLPDTVVNKS 59
Query: 322 LKSLQTKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQQCRR 501
LK LQ KNLIKEV ++++K RK M EFEPS+EI+GGTWY +G LD FI +L+ QC++
Sbjct: 60 LKVLQAKNLIKEVVNIQNKGRKYYMATEFEPSKEITGGTWYVEGNLDTMFIGVLKDQCKK 119
Query: 502 LMEDLKVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 657
+E LKVAT E + I + V + +T QQI EI++ +VLD +V ++KS+G
Sbjct: 120 QIEKLKVATVEAVTDFINRTGVSTVHLTKQQIEEILKALVLDNKVTEVKSNG 171
>ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Citrus sinensis]
Length = 233
Score = 161 bits (408), Expect = 5e-46
Identities = 81/166 (48%), Positives = 117/166 (70%), Gaps = 1/166 (0%)
Frame = +1
Query: 163 KRPQPDSSPRLPKLTELEFKIYEVIKSKEGSGIWTNDVRKEV-IGFPPTAINKALKSLQT 339
KR +P+S+ LT+ E IY+VI+SK+ GIWT D+++E+ + P + K++KSLQ
Sbjct: 3 KRKRPESNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62
Query: 340 KNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQQCRRLMEDLK 519
K+LIKEV ++ K +K +M VEFEPS+EISGG WY +G+LD FIK+++ QC + + LK
Sbjct: 63 KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLK 122
Query: 520 VATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 657
VAT E I SIK S F +D+T QQI EIV +VLD ++ ++KS+G
Sbjct: 123 VATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNG 168
>gb|PKA46474.1| hypothetical protein AXF42_Ash012607 [Apostasia shenzhenica]
Length = 230
Score = 160 bits (406), Expect = 9e-46
Identities = 83/156 (53%), Positives = 110/156 (70%)
Frame = +1
Query: 190 RLPKLTELEFKIYEVIKSKEGSGIWTNDVRKEVIGFPPTAINKALKSLQTKNLIKEVTSV 369
+LP L E E K+Y+VI SK G+WT D++K G P K LKSLQTK+LIK V ++
Sbjct: 12 KLPSLPENEKKLYDVIWSKGTMGMWTADMKKAT-GLPNNTFTKTLKSLQTKDLIKAVANI 70
Query: 370 KHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQQCRRLMEDLKVATCEMIRKS 549
+K +K M VEFEPS+EI+GGTWY +G+LD FI +LR QC R +E KVAT E++ +
Sbjct: 71 NNKGKKFFMAVEFEPSKEITGGTWYSEGSLDFEFINVLRGQCLRHIERHKVATVEIVWQC 130
Query: 550 IKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 657
I+DS VF + T+QQI EI+ MVLDKE+++L SSG
Sbjct: 131 IRDSGVFTTECTMQQIKEIMGAMVLDKEIEELNSSG 166
>ref|XP_002509507.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Ricinus
communis]
ref|XP_015570361.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Ricinus
communis]
ref|XP_015570404.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Ricinus
communis]
gb|EEF50894.1| DNA-directed RNA polymerase III subunit F, putative [Ricinus
communis]
Length = 236
Score = 160 bits (406), Expect = 1e-45
Identities = 84/165 (50%), Positives = 113/165 (68%)
Frame = +1
Query: 163 KRPQPDSSPRLPKLTELEFKIYEVIKSKEGSGIWTNDVRKEVIGFPPTAINKALKSLQTK 342
KR QP+SS LTE E +Y VI SK+ GIWT D+++E P +NK+LK LQ K
Sbjct: 8 KRKQPESSSPAQSLTEHECTLYNVIWSKQDMGIWTRDMKRET-NLPDNVVNKSLKVLQAK 66
Query: 343 NLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQQCRRLMEDLKV 522
NLIKEV ++++K RK M EFEPS+EI+GG WY +G LD FIK+L++ C + + LKV
Sbjct: 67 NLIKEVVNIQNKGRKHYMATEFEPSKEITGGAWYVEGNLDTEFIKLLKEVCTKQVLKLKV 126
Query: 523 ATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 657
AT E I SIK S +FN ++T QQI EIV+ +VLD + ++KS+G
Sbjct: 127 ATLEGITDSIKRSGIFNTELTKQQIEEIVKALVLDNALIEVKSNG 171
>ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X2 [Citrus sinensis]
Length = 234
Score = 159 bits (401), Expect = 6e-45
Identities = 82/167 (49%), Positives = 118/167 (70%), Gaps = 2/167 (1%)
Frame = +1
Query: 163 KRPQPDSSPRLPKLTELEFKIYEVIKS-KEGSGIWTNDVRKEV-IGFPPTAINKALKSLQ 336
KR +PDS+ LT+ E IY+VI+S K+ GIWT D+++E+ + P + K++KSLQ
Sbjct: 3 KRKRPDSNAPSDSLTDHERLIYDVIRSNKQDMGIWTRDMKRELKVNLPDNIVTKSIKSLQ 62
Query: 337 TKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQQCRRLMEDL 516
K+LIKEV ++ +K +K +M VEFEPS+EISGG WY +G+LD FIK+++ QC + + L
Sbjct: 63 NKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKL 122
Query: 517 KVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 657
KVAT E I SIK S F +D+T QQI EIV +VLD ++ ++KS+G
Sbjct: 123 KVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNG 169
>ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X1 [Citrus sinensis]
Length = 252
Score = 159 bits (401), Expect = 1e-44
Identities = 82/167 (49%), Positives = 118/167 (70%), Gaps = 2/167 (1%)
Frame = +1
Query: 163 KRPQPDSSPRLPKLTELEFKIYEVIKS-KEGSGIWTNDVRKEV-IGFPPTAINKALKSLQ 336
KR +PDS+ LT+ E IY+VI+S K+ GIWT D+++E+ + P + K++KSLQ
Sbjct: 21 KRKRPDSNAPSDSLTDHERLIYDVIRSNKQDMGIWTRDMKRELKVNLPDNIVTKSIKSLQ 80
Query: 337 TKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQQCRRLMEDL 516
K+LIKEV ++ +K +K +M VEFEPS+EISGG WY +G+LD FIK+++ QC + + L
Sbjct: 81 NKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKL 140
Query: 517 KVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 657
KVAT E I SIK S F +D+T QQI EIV +VLD ++ ++KS+G
Sbjct: 141 KVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNG 187
>gb|KDO80021.1| hypothetical protein CISIN_1g0254932mg, partial [Citrus sinensis]
Length = 234
Score = 157 bits (398), Expect = 2e-44
Identities = 81/167 (48%), Positives = 118/167 (70%), Gaps = 2/167 (1%)
Frame = +1
Query: 163 KRPQPDSSPRLPKLTELEFKIYEVIKS-KEGSGIWTNDVRKEV-IGFPPTAINKALKSLQ 336
KR +PDS+ LT+ E IY+VI+S K+ GIWT D+++E+ + P + K++KSLQ
Sbjct: 3 KRKRPDSNAPSDSLTDHERLIYDVIRSNKQDMGIWTRDMKRELKVNLPDNIVTKSIKSLQ 62
Query: 337 TKNLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQQCRRLMEDL 516
K+LIKEV ++ +K +K +M VEFEPS++ISGG WY +G+LD FIK+++ QC + + L
Sbjct: 63 NKSLIKEVVNIHNKGKKHLMAVEFEPSKDISGGAWYSEGSLDTEFIKVVKSQCLKQIIKL 122
Query: 517 KVATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 657
KVAT E I SIK S F +D+T QQI EIV +VLD ++ ++KS+G
Sbjct: 123 KVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNG 169
>ref|XP_018829908.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
[Juglans regia]
ref|XP_018829909.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
[Juglans regia]
ref|XP_018829910.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
[Juglans regia]
Length = 239
Score = 156 bits (394), Expect = 8e-44
Identities = 77/165 (46%), Positives = 114/165 (69%)
Frame = +1
Query: 163 KRPQPDSSPRLPKLTELEFKIYEVIKSKEGSGIWTNDVRKEVIGFPPTAINKALKSLQTK 342
KR +PDS+ LTE E +Y++I+SK+ IWT D+++E P + K+LKSLQTK
Sbjct: 11 KRKRPDSNSPSVSLTEHERLLYDLIQSKQDMAIWTRDMKRET-NLPDNVVTKSLKSLQTK 69
Query: 343 NLIKEVTSVKHKTRKIVMGVEFEPSEEISGGTWYQDGALDVAFIKILRQQCRRLMEDLKV 522
LIKEV ++++K RK + EFEPS EI+GGTWY +G LD FI L++ C +++ + KV
Sbjct: 70 KLIKEVVNIQNKGRKHYIATEFEPSTEITGGTWYAEGNLDTEFINFLKKHCVKIIYEQKV 129
Query: 523 ATCEMIRKSIKDSRVFNMDITLQQIYEIVELMVLDKEVDKLKSSG 657
AT E + +I+ SR FN++ T QQ+ EIV ++VLD E+ ++KS+G
Sbjct: 130 ATLEGVLDTIRRSRAFNIEFTTQQVEEIVNVLVLDNEIMEVKSNG 174