BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00018324
         (524 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010914579.1| PREDICTED: pentatricopeptide repeat-containi...    67   8e-10
ref|XP_020581196.1| pentatricopeptide repeat-containing protein ...    65   4e-09
gb|PKA51558.1| Pentatricopeptide repeat-containing protein [Apos...    65   5e-09
ref|XP_020672351.1| pentatricopeptide repeat-containing protein ...    64   9e-09
ref|XP_009381720.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08
ref|XP_008809274.2| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06

>ref|XP_010914579.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Elaeis guineensis]
          Length = 862

 Score = 67.4 bits (163), Expect = 8e-10
 Identities = 46/115 (40%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
 Frame = +1

Query: 205 DFRRARSTRTISKRNXXXXXXXXXXXXXXXXGF---LTLLLNSQPHHRP------TLQPS 357
           +FRR RSTR ISKRN                     L  +L S P+ R       + +P+
Sbjct: 99  EFRRTRSTRVISKRNLSSAKPSHDNARTASPAAAHCLAQILRSPPNDRALVTILSSFRPA 158

Query: 358 LLSVPDDYCFILHSLAELNRPGSSSTSPAKAAAFFRSSLPSMRNFKEKGKLLTAA 522
           L ++P+DYCFILH L      G     P KA  FF S++P MR+  E+GKLLTAA
Sbjct: 159 L-AIPEDYCFILHEL------GDRDKCPPKALRFFHSAMPLMRSRIEQGKLLTAA 206


>ref|XP_020581196.1| pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Phalaenopsis equestris]
          Length = 845

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 44/115 (38%), Positives = 55/115 (47%), Gaps = 9/115 (7%)
 Frame = +1

Query: 205 DFRRARSTRTISKRNXXXXXXXXXXXXXXXXGFLTL---LLNSQPHHRPTLQPSL----- 360
           +FR+ R+T+ ISKRN                    +   LL S P     L  +      
Sbjct: 82  EFRKNRTTKVISKRNLSSPRPHFSQQRSASLAAADITARLLRSSPDDLQGLVSTFSSSQQ 141

Query: 361 -LSVPDDYCFILHSLAELNRPGSSSTSPAKAAAFFRSSLPSMRNFKEKGKLLTAA 522
            L +P+DYCF+LH L      G+      K  AFF SS+P MRNF EKGKLLTAA
Sbjct: 142 KLKIPEDYCFVLHEL------GNRDKCAPKVLAFFFSSIPLMRNFTEKGKLLTAA 190


>gb|PKA51558.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
          Length = 840

 Score = 65.1 bits (157), Expect = 5e-09
 Identities = 46/116 (39%), Positives = 57/116 (49%), Gaps = 10/116 (8%)
 Frame = +1

Query: 205 DFRRARSTRTISKRNXXXXXXXXXXXXXXXXGFL----TLLLNSQPHHR------PTLQP 354
           DFRR R+T+ ISKRN                  +     LL +S   H        T Q 
Sbjct: 76  DFRRNRTTKVISKRNFCSPRPFYSQNRTASEAAVHLTSRLLCSSADDHLGLTGIFRTFQH 135

Query: 355 SLLSVPDDYCFILHSLAELNRPGSSSTSPAKAAAFFRSSLPSMRNFKEKGKLLTAA 522
           + L +P+DYCF+LH L      G     P KA AFF SS+P MR+  E+GKLLTAA
Sbjct: 136 T-LRIPEDYCFVLHEL------GDRDKCPPKALAFFHSSMPFMRDSTERGKLLTAA 184


>ref|XP_020672351.1| pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Dendrobium catenatum]
 gb|PKU68253.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
          Length = 844

 Score = 64.3 bits (155), Expect = 9e-09
 Identities = 44/114 (38%), Positives = 57/114 (50%), Gaps = 9/114 (7%)
 Frame = +1

Query: 205 DFRRARSTRTISKRNXXXXXXXXXXXXXXXXGFLTL---LLNSQPHHRPTLQPSL----- 360
           +FRR+R+T+ ISKRN                  + +   LL S       L+  L     
Sbjct: 81  EFRRSRTTKVISKRNLSSPRTYFSQTRSASAAAVDITARLLCSSLDDIQGLKGILGSFQH 140

Query: 361 -LSVPDDYCFILHSLAELNRPGSSSTSPAKAAAFFRSSLPSMRNFKEKGKLLTA 519
            L +P+DYCF+LH L      G+    P KA AFF +S+P MRN  EKGKLLTA
Sbjct: 141 KLKIPEDYCFVLHEL------GNRDKCPPKALAFFHASIPLMRNSTEKGKLLTA 188


>ref|XP_009381720.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Musa acuminata subsp. malaccensis]
          Length = 874

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 44/114 (38%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
 Frame = +1

Query: 205 DFRRARSTRTISKRNXXXXXXXXXXXXXXXXGF---LTLLLNSQPHHRP-----TLQPSL 360
           +FRR R+TR ISKRN                     L  +L S P   P     T     
Sbjct: 111 EFRRNRTTRVISKRNLSSPRPSQSSARAASPAAARCLLQILRSGPDDHPLGDIVTSFRLD 170

Query: 361 LSVPDDYCFILHSLAELNRPGSSSTSPAKAAAFFRSSLPSMRNFKEKGKLLTAA 522
           L+VP+DYC+ILH L      G+    P KA  FF S++P M++  E+GKLLTAA
Sbjct: 171 LAVPEDYCYILHEL------GNRQKCPLKALKFFNSAMPLMKSLTEQGKLLTAA 218


>ref|XP_008809274.2| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic, partial [Phoenix dactylifera]
          Length = 766

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/78 (43%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
 Frame = +1

Query: 304 LTLLLNSQPHHRPTLQ-----PSLLSVPDDYCFILHSLAELNRPGSSSTSPAKAAAFFRS 468
           L+ +L S P+ R          S L++P+DYCFILH L      G     P KA  FF S
Sbjct: 39  LSQILRSPPNDRALANILSSFRSSLAIPEDYCFILHEL------GDRDKCPPKALRFFHS 92

Query: 469 SLPSMRNFKEKGKLLTAA 522
           ++P MR+  E+GKLLTAA
Sbjct: 93  AMPLMRSRIEQGKLLTAA 110