BLASTX nr result
ID: Ophiopogon25_contig00018230
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00018230
(499 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020271664.1| glycine-rich RNA-binding protein 4, mitochon... 127 8e-34
ref|XP_010938765.1| PREDICTED: multiple RNA-binding domain-conta... 122 6e-32
gb|PKU70347.1| Glycine-rich RNA-binding protein 4, mitochondrial... 108 8e-27
ref|XP_020589585.1| glycine-rich RNA-binding protein 2, mitochon... 107 2e-26
ref|XP_010278458.1| PREDICTED: glycine-rich RNA-binding protein ... 105 1e-25
ref|XP_009417918.1| PREDICTED: multiple RNA-binding domain-conta... 102 2e-24
ref|XP_020702097.1| glycine-rich RNA-binding protein 4, mitochon... 99 4e-23
gb|ONK62832.1| uncharacterized protein A4U43_C07F8590 [Asparagus... 96 1e-22
gb|ERN12363.1| hypothetical protein AMTR_s00025p00095750 [Ambore... 95 6e-22
ref|XP_006584061.1| PREDICTED: glycine-rich RNA-binding protein ... 96 7e-22
ref|XP_020526829.1| probable splicing factor, arginine/serine-ri... 95 2e-21
ref|XP_020227066.1| glycine-rich RNA-binding protein 4, mitochon... 89 2e-19
ref|XP_007154133.1| hypothetical protein PHAVU_003G093200g [Phas... 88 8e-19
ref|XP_014508679.1| multiple RNA-binding domain-containing prote... 87 1e-18
ref|XP_021688940.1| organelle RRM domain-containing protein 2, m... 88 1e-18
ref|XP_006356681.1| PREDICTED: RNA-binding motif protein, Y chro... 87 2e-18
ref|XP_003550050.1| PREDICTED: glycine-rich RNA-binding protein ... 87 2e-18
ref|XP_017428691.1| PREDICTED: multiple RNA-binding domain-conta... 86 3e-18
gb|KHG06617.1| Glycine-rich RNA-binding 10 [Gossypium arboreum] 86 3e-18
ref|XP_017974386.1| PREDICTED: RNA-binding motif protein, X-link... 86 4e-18
>ref|XP_020271664.1| glycine-rich RNA-binding protein 4, mitochondrial-like [Asparagus
officinalis]
Length = 199
Score = 127 bits (319), Expect = 8e-34
Identities = 65/92 (70%), Positives = 70/92 (76%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDXXXXXXXXXXXXXESLGLAYIWFAREGDALLAVEEM 223
IFIKGLS STSEG LVK+FS FGD ESLGLAYIWFA E DAL +V+EM
Sbjct: 108 IFIKGLSRSTSEGVLVKIFSTFGDIRKVKVITSKGSKESLGLAYIWFAHEEDALSSVKEM 167
Query: 224 DGKFVDGRFIAVMMARPEAPSKQMRTTPYRFR 319
DGKFVDGRFIAVMMARPE PSKQ+R PY+FR
Sbjct: 168 DGKFVDGRFIAVMMARPEGPSKQVRALPYKFR 199
>ref|XP_010938765.1| PREDICTED: multiple RNA-binding domain-containing protein 1 [Elaeis
guineensis]
Length = 207
Score = 122 bits (307), Expect = 6e-32
Identities = 61/91 (67%), Positives = 69/91 (75%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDXXXXXXXXXXXXXESLGLAYIWFAREGDALLAVEEM 223
IFI+GLSC+TSEG L K+FSCFG+ ESLGLAYIWFA E DA AV+EM
Sbjct: 117 IFIRGLSCTTSEGYLAKIFSCFGEVSRVKIVTSKTSKESLGLAYIWFACEQDAQQAVKEM 176
Query: 224 DGKFVDGRFIAVMMARPEAPSKQMRTTPYRF 316
DGKFVDGRFIAVMMA+PE+ SKQ+R PYRF
Sbjct: 177 DGKFVDGRFIAVMMAKPESRSKQVRAIPYRF 207
>gb|PKU70347.1| Glycine-rich RNA-binding protein 4, mitochondrial [Dendrobium
catenatum]
Length = 167
Score = 108 bits (270), Expect = 8e-27
Identities = 55/91 (60%), Positives = 66/91 (72%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDXXXXXXXXXXXXXESLGLAYIWFAREGDALLAVEEM 223
IF+KGLS STSEG L+K FS FG+ ESLG+AYIWFA LA++EM
Sbjct: 77 IFVKGLSRSTSEGYLLKQFSQFGEIRKVKIITSRGSKESLGMAYIWFACTESTKLAIKEM 136
Query: 224 DGKFVDGRFIAVMMARPEAPSKQMRTTPYRF 316
+GKFVDGRFIAVMM+RPEAP+KQ++ PYRF
Sbjct: 137 NGKFVDGRFIAVMMSRPEAPTKQVKFMPYRF 167
>ref|XP_020589585.1| glycine-rich RNA-binding protein 2, mitochondrial-like isoform X1
[Phalaenopsis equestris]
Length = 167
Score = 107 bits (267), Expect = 2e-26
Identities = 53/91 (58%), Positives = 65/91 (71%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDXXXXXXXXXXXXXESLGLAYIWFAREGDALLAVEEM 223
IF+KGLS STSEGCL+K FS FG+ ESLG+AY+WFA A LA++EM
Sbjct: 77 IFVKGLSRSTSEGCLLKQFSQFGEISKVKIVTSRGAKESLGMAYVWFACTESAELAIKEM 136
Query: 224 DGKFVDGRFIAVMMARPEAPSKQMRTTPYRF 316
+GKF DGRFIAV M+RPEAP+K ++ PYRF
Sbjct: 137 NGKFFDGRFIAVTMSRPEAPTKHVKFMPYRF 167
>ref|XP_010278458.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
isoform X1 [Nelumbo nucifera]
Length = 161
Score = 105 bits (262), Expect = 1e-25
Identities = 51/91 (56%), Positives = 63/91 (69%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDXXXXXXXXXXXXXESLGLAYIWFAREGDALLAVEEM 223
IFIKGL S SEGCL+K FSC+G+ +SLGLAY+WFA E A LAV EM
Sbjct: 71 IFIKGLPLSMSEGCLMKSFSCYGEVRKVKIITDRKSRQSLGLAYVWFASEESAQLAVAEM 130
Query: 224 DGKFVDGRFIAVMMARPEAPSKQMRTTPYRF 316
DGKF GRFIAV +A+PE+P+ ++RT Y+F
Sbjct: 131 DGKFFGGRFIAVTIAKPESPTSKVRTVSYKF 161
>ref|XP_009417918.1| PREDICTED: multiple RNA-binding domain-containing protein 1 [Musa
acuminata subsp. malaccensis]
Length = 173
Score = 102 bits (254), Expect = 2e-24
Identities = 52/85 (61%), Positives = 62/85 (72%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDXXXXXXXXXXXXXESLGLAYIWFAREGDALLAVEEM 223
IFIKGLS STSEG L K FS FG+ +SLGLAYIWFARE DAL+AV+EM
Sbjct: 79 IFIKGLSRSTSEGFLAKTFSSFGEVKKITIITSKSSKQSLGLAYIWFAREQDALMAVKEM 138
Query: 224 DGKFVDGRFIAVMMARPEAPSKQMR 298
+GKF+DGRF+AV +A E+PSKQ +
Sbjct: 139 NGKFLDGRFVAVTIAEAESPSKQRK 163
>ref|XP_020702097.1| glycine-rich RNA-binding protein 4, mitochondrial-like isoform X1
[Dendrobium catenatum]
Length = 177
Score = 99.4 bits (246), Expect = 4e-23
Identities = 51/84 (60%), Positives = 61/84 (72%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDXXXXXXXXXXXXXESLGLAYIWFAREGDALLAVEEM 223
IF+KGLS STSEG L+K FS FG+ ESLG+AYIWFA LA++EM
Sbjct: 77 IFVKGLSRSTSEGYLLKQFSQFGEIRKVKIITSRGSKESLGMAYIWFACTESTKLAIKEM 136
Query: 224 DGKFVDGRFIAVMMARPEAPSKQM 295
+GKFVDGRFIAVMM+RPEAP+KQ+
Sbjct: 137 NGKFVDGRFIAVMMSRPEAPTKQV 160
>gb|ONK62832.1| uncharacterized protein A4U43_C07F8590 [Asparagus officinalis]
Length = 92
Score = 95.5 bits (236), Expect = 1e-22
Identities = 45/55 (81%), Positives = 49/55 (89%)
Frame = +2
Query: 155 ESLGLAYIWFAREGDALLAVEEMDGKFVDGRFIAVMMARPEAPSKQMRTTPYRFR 319
ESLGLAYIWFA E DAL +V+EMDGKFVDGRFIAVMMARPE PSKQ+R PY+FR
Sbjct: 38 ESLGLAYIWFAHEEDALSSVKEMDGKFVDGRFIAVMMARPEGPSKQVRALPYKFR 92
>gb|ERN12363.1| hypothetical protein AMTR_s00025p00095750 [Amborella trichopoda]
Length = 121
Score = 94.7 bits (234), Expect = 6e-22
Identities = 49/91 (53%), Positives = 57/91 (62%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDXXXXXXXXXXXXXESLGLAYIWFAREGDALLAVEEM 223
+FIKGLS ST+EG L FS FG +SLG AYIWF E DA LAV++M
Sbjct: 31 VFIKGLSLSTTEGYLTNAFSQFGKVDRVKVVTDRASKQSLGFAYIWFTCEEDAKLAVKKM 90
Query: 224 DGKFVDGRFIAVMMARPEAPSKQMRTTPYRF 316
DGKF DGRF+ V MA PE S + + TPYRF
Sbjct: 91 DGKFFDGRFVHVTMAWPETLSNKRKATPYRF 121
>ref|XP_006584061.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Glycine max]
gb|KRH51016.1| hypothetical protein GLYMA_07G256600 [Glycine max]
Length = 157
Score = 95.5 bits (236), Expect = 7e-22
Identities = 49/91 (53%), Positives = 59/91 (64%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDXXXXXXXXXXXXXESLGLAYIWFAREGDALLAVEEM 223
IF+KGL STSEG L+KVFS FGD +SLG AYIWF +E A LAV+EM
Sbjct: 67 IFVKGLPLSTSEGRLMKVFSEFGDVTLVQLPIDRESGQSLGFAYIWFVKEESAQLAVQEM 126
Query: 224 DGKFVDGRFIAVMMARPEAPSKQMRTTPYRF 316
+GKF DGRFI V +A+P + RTT Y+F
Sbjct: 127 NGKFFDGRFIYVTIAKPGSSKSSKRTTAYKF 157
>ref|XP_020526829.1| probable splicing factor, arginine/serine-rich 4 isoform X1
[Amborella trichopoda]
Length = 163
Score = 94.7 bits (234), Expect = 2e-21
Identities = 49/91 (53%), Positives = 57/91 (62%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDXXXXXXXXXXXXXESLGLAYIWFAREGDALLAVEEM 223
+FIKGLS ST+EG L FS FG +SLG AYIWF E DA LAV++M
Sbjct: 73 VFIKGLSLSTTEGYLTNAFSQFGKVDRVKVVTDRASKQSLGFAYIWFTCEEDAKLAVKKM 132
Query: 224 DGKFVDGRFIAVMMARPEAPSKQMRTTPYRF 316
DGKF DGRF+ V MA PE S + + TPYRF
Sbjct: 133 DGKFFDGRFVHVTMAWPETLSNKRKATPYRF 163
>ref|XP_020227066.1| glycine-rich RNA-binding protein 4, mitochondrial isoform X2
[Cajanus cajan]
Length = 161
Score = 89.4 bits (220), Expect = 2e-19
Identities = 47/91 (51%), Positives = 59/91 (64%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDXXXXXXXXXXXXXESLGLAYIWFAREGDALLAVEEM 223
IF+KGL STSEG L+KVFS FG+ +SLG A+I FA+E A LAV+EM
Sbjct: 71 IFVKGLPLSTSEGRLMKVFSEFGEVTLVQLPIDKESSQSLGFAFISFAKEESAQLAVQEM 130
Query: 224 DGKFVDGRFIAVMMARPEAPSKQMRTTPYRF 316
+GKF DGRFI V +A+P + RTT Y+F
Sbjct: 131 NGKFFDGRFIYVTIAKPRSSKSSKRTTAYKF 161
>ref|XP_007154133.1| hypothetical protein PHAVU_003G093200g [Phaseolus vulgaris]
gb|ESW26127.1| hypothetical protein PHAVU_003G093200g [Phaseolus vulgaris]
Length = 161
Score = 87.8 bits (216), Expect = 8e-19
Identities = 45/91 (49%), Positives = 58/91 (63%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDXXXXXXXXXXXXXESLGLAYIWFAREGDALLAVEEM 223
IF+KGL S SEG L+KVFS FG+ +SLG A+IWF +E A LA++EM
Sbjct: 71 IFVKGLPHSASEGRLMKVFSEFGEVNLVQLPIDEESGQSLGFAFIWFVKEESAQLAIQEM 130
Query: 224 DGKFVDGRFIAVMMARPEAPSKQMRTTPYRF 316
+GKF DGRFI V +A+P + K TT Y+F
Sbjct: 131 NGKFFDGRFIYVTIAKPGSSKKLKGTTAYKF 161
>ref|XP_014508679.1| multiple RNA-binding domain-containing protein 1 [Vigna radiata
var. radiata]
Length = 161
Score = 87.4 bits (215), Expect = 1e-18
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDXXXXXXXXXXXXXESLGLAYIWFAREGDALLAVEEM 223
IF+KGL STSEG L+KVFS FG+ +SLG A+IWF +E A LAV+EM
Sbjct: 71 IFVKGLPHSTSEGRLMKVFSEFGEVNLVQLPIDEKSGKSLGFAFIWFVKEESAQLAVQEM 130
Query: 224 DGKFVDGRFIAVMMARPEAPSKQMRTTPYRF 316
+GKF DGRFI V +A+P + TT Y+F
Sbjct: 131 NGKFFDGRFIYVTIAKPGSLKNLKTTTAYKF 161
>ref|XP_021688940.1| organelle RRM domain-containing protein 2, mitochondrial-like
isoform X1 [Hevea brasiliensis]
Length = 191
Score = 88.2 bits (217), Expect = 1e-18
Identities = 45/91 (49%), Positives = 57/91 (62%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDXXXXXXXXXXXXXESLGLAYIWFAREGDALLAVEEM 223
+FIKGL+ STSEG L K FS FG+ +SLG A++WF E A LAV+EM
Sbjct: 101 VFIKGLALSTSEGSLKKAFSQFGEVSRTKIVTDKKTKQSLGSAFVWFTSEESAKLAVKEM 160
Query: 224 DGKFVDGRFIAVMMARPEAPSKQMRTTPYRF 316
DGKF +GRFI V +++P A R TPY+F
Sbjct: 161 DGKFFEGRFIYVTISKPGACKTSGRPTPYKF 191
>ref|XP_006356681.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
B-like isoform X1 [Solanum tuberosum]
Length = 168
Score = 87.0 bits (214), Expect = 2e-18
Identities = 46/91 (50%), Positives = 56/91 (61%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDXXXXXXXXXXXXXESLGLAYIWFAREGDALLAVEEM 223
IF+KGL+ ST EG L VFS FGD ESLG AYIWF A AV+EM
Sbjct: 78 IFLKGLAKSTPEGRLKVVFSQFGDVSRVKIITDKKSKESLGFAYIWFPDNESAQAAVQEM 137
Query: 224 DGKFVDGRFIAVMMARPEAPSKQMRTTPYRF 316
+GKF+DGRFI V MA+P + ++T PY+F
Sbjct: 138 NGKFLDGRFIQVQMAKPGSCKLNIKTMPYKF 168
>ref|XP_003550050.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X1 [Glycine max]
gb|KRH02127.1| hypothetical protein GLYMA_17G017500 [Glycine max]
Length = 160
Score = 86.7 bits (213), Expect = 2e-18
Identities = 46/91 (50%), Positives = 56/91 (61%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDXXXXXXXXXXXXXESLGLAYIWFAREGDALLAVEEM 223
IF+KGL STSEG L+KVFS FG+ +SLG AYIWF +E A LAV EM
Sbjct: 70 IFVKGLPLSTSEGHLMKVFSEFGEVTLIQLPIDKESGQSLGFAYIWFVKEESAQLAVLEM 129
Query: 224 DGKFVDGRFIAVMMARPEAPSKQMRTTPYRF 316
+GKF GRFI V +A+P + R T Y+F
Sbjct: 130 NGKFFYGRFIYVTIAKPGSSKSSKRATAYKF 160
>ref|XP_017428691.1| PREDICTED: multiple RNA-binding domain-containing protein 1 [Vigna
angularis]
Length = 161
Score = 86.3 bits (212), Expect = 3e-18
Identities = 46/91 (50%), Positives = 57/91 (62%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDXXXXXXXXXXXXXESLGLAYIWFAREGDALLAVEEM 223
IF+KGL STSEG L+KVFS FG +SLG A+IWF +E A LAV+EM
Sbjct: 71 IFVKGLPHSTSEGRLMKVFSEFGVVNLVQLPIDEKSGKSLGFAFIWFVKEESAQLAVQEM 130
Query: 224 DGKFVDGRFIAVMMARPEAPSKQMRTTPYRF 316
+GKF DGRFI V +A+P + TT Y+F
Sbjct: 131 NGKFFDGRFIYVTIAKPGSLKNSKSTTAYKF 161
>gb|KHG06617.1| Glycine-rich RNA-binding 10 [Gossypium arboreum]
Length = 161
Score = 86.3 bits (212), Expect = 3e-18
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDXXXXXXXXXXXXXESLGLAYIWFAREGDALLAVEEM 223
+FIKGL ST+EG L KVFS FG+ +SLG A++WF E LAV E+
Sbjct: 71 VFIKGLPQSTAEGRLKKVFSQFGEVKEVHVVRERVSKQSLGSAFVWFDNEESVRLAVNEL 130
Query: 224 DGKFVDGRFIAVMMARPEAPSKQMRTTPYRF 316
+GKF DGRF++V +A P K+ RTTPY+F
Sbjct: 131 NGKFFDGRFVSVKIAVPGLSKKRGRTTPYKF 161
>ref|XP_017974386.1| PREDICTED: RNA-binding motif protein, X-linked 2 isoform X2
[Theobroma cacao]
Length = 159
Score = 85.9 bits (211), Expect = 4e-18
Identities = 45/91 (49%), Positives = 56/91 (61%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDXXXXXXXXXXXXXESLGLAYIWFAREGDALLAVEEM 223
+FIKGL ST+EG L +VFS FG+ +SLG A++WF E A LAV+EM
Sbjct: 69 VFIKGLPQSTAEGRLKRVFSQFGEVKQVNVVRERVSKQSLGSAFVWFDEEQSAQLAVKEM 128
Query: 224 DGKFVDGRFIAVMMARPEAPSKQMRTTPYRF 316
+GKF DGRFI V +A P + R TPYRF
Sbjct: 129 NGKFFDGRFILVKIAMPGLSKNRGRATPYRF 159