BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00018160
         (722 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020277370.1| LOW QUALITY PROTEIN: pentatricopeptide repea...   349   e-114
gb|ONK62054.1| uncharacterized protein A4U43_C08F36320 [Asparagu...   349   e-112
ref|XP_009402292.1| PREDICTED: pentatricopeptide repeat-containi...   324   e-103
ref|XP_008795515.1| PREDICTED: pentatricopeptide repeat-containi...   322   e-102
gb|PKA55094.1| Pentatricopeptide repeat-containing protein [Apos...   315   e-100
ref|XP_010909905.1| PREDICTED: pentatricopeptide repeat-containi...   311   4e-98
ref|XP_020695322.1| pentatricopeptide repeat-containing protein ...   307   5e-97
ref|XP_020695320.1| pentatricopeptide repeat-containing protein ...   307   8e-97
ref|XP_020585876.1| pentatricopeptide repeat-containing protein ...   295   1e-92
ref|XP_020585869.1| pentatricopeptide repeat-containing protein ...   295   2e-92
ref|XP_020585861.1| pentatricopeptide repeat-containing protein ...   295   3e-92
gb|OVA06499.1| Pentatricopeptide repeat [Macleaya cordata]            287   5e-89
ref|XP_021973810.1| pentatricopeptide repeat-containing protein ...   272   4e-83
gb|PON49396.1| DYW domain containing protein [Trema orientalis]       271   7e-83
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi...   270   2e-82
gb|PON63025.1| DYW domain containing protein [Parasponia anderso...   270   3e-82
gb|PHT80272.1| Pentatricopeptide repeat-containing protein, chlo...   268   4e-82
gb|PHT46891.1| Pentatricopeptide repeat-containing protein, chlo...   266   4e-81
ref|XP_016577697.1| PREDICTED: pentatricopeptide repeat-containi...   266   4e-81
ref|XP_008365629.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   266   1e-80

>ref|XP_020277370.1| LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein
           At2g29760, chloroplastic-like [Asparagus officinalis]
          Length = 659

 Score =  349 bits (896), Expect = e-114
 Identities = 176/239 (73%), Positives = 204/239 (85%), Gaps = 1/239 (0%)
 Frame = +2

Query: 8   RLAAALHAMALKSPPHSHDIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSII 187
           R  AALHAM  KSPPHS D+F+LNSL+H YASC  LNLSF++F  IP  H+DVVSWNSII
Sbjct: 68  RFGAALHAMVFKSPPHSSDVFVLNSLVHFYASCADLNLSFRVFSSIP--HKDVVSWNSII 125

Query: 188 AAFAQAGRWDGALDLFRQMED-AGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDG 364
            AF+Q GR D AL+LFRQM+D A + PNDVTMVSVLSAC M+GDL+FGR +HS I  ND 
Sbjct: 126 TAFSQGGRCDEALELFRQMKDTAHVRPNDVTMVSVLSACAMRGDLDFGRWLHSYIRAND- 184

Query: 365 IAECLILNNAILDMYVKCNGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFD 544
           I++ LILNNAILDMYVKC  L+ AK+LFD+MVDRDSI+WTT+LVGYAKSGEFD ++RLF+
Sbjct: 185 ISDSLILNNAILDMYVKCGSLQDAKLLFDQMVDRDSITWTTLLVGYAKSGEFDVSRRLFN 244

Query: 545 EMPSRDIASWNALISGYEQNGRPKDALALFNELQHADVEPDQVTLVAALSACSQLGAIE 721
           E+PSRDIA WNALISGYEQN RPKDALALF+EL+ AD  PDQVTLVAALSAC+QLGAI+
Sbjct: 245 EIPSRDIACWNALISGYEQNDRPKDALALFSELKDADERPDQVTLVAALSACAQLGAID 303



 Score =  116 bits (290), Expect = 5e-26
 Identities = 72/220 (32%), Positives = 111/220 (50%)
 Frame = +2

Query: 62  DIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQAGRWDGALDLFRQ 241
           D     +L+  YA  G  ++S +LF++IP   RD+  WN++I+ + Q  R   AL LF +
Sbjct: 219 DSITWTTLLVGYAKSGEFDVSRRLFNEIPS--RDIACWNALISGYEQNDRPKDALALFSE 276

Query: 242 MEDAGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLILNNAILDMYVKCN 421
           ++DA   P+ VT+V+ LSAC   G ++ G  IH+ I +N+       L  +++DMY KC 
Sbjct: 277 LKDADERPDQVTLVAALSACAQLGAIDTGCWIHAFIRKNNFHLN-FHLTTSLIDMYSKCG 335

Query: 422 GLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFDEMPSRDIASWNALISGYEQ 601
            LE A  +F+ + +RD   W+ M                               I G+  
Sbjct: 336 ELEKAVQVFESVDERDVFVWSAM-------------------------------IGGFAM 364

Query: 602 NGRPKDALALFNELQHADVEPDQVTLVAALSACSQLGAIE 721
            GR +DAL LF ++Q A V+P++VT    L ACS  G +E
Sbjct: 365 YGRGRDALGLFLQMQQAGVKPNKVTFTNILCACSHAGLVE 404



 Score = 80.9 bits (198), Expect = 9e-14
 Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 6/202 (2%)
 Frame = +2

Query: 23  LHAMALKSPPHSHDIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQ 202
           +HA   K+  H +   +  SLI  Y+ CG L  + Q+F+ +    RDV  W+++I  FA 
Sbjct: 308 IHAFIRKNNFHLN-FHLTTSLIDMYSKCGELEKAVQVFESV--DERDVFVWSAMIGGFAM 364

Query: 203 AGRWDGALDLFRQMEDAGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLI 382
            GR   AL LF QM+ AG+ PN VT  ++L AC   G +E GR   S +    GIA  + 
Sbjct: 365 YGRGRDALGLFLQMQQAGVKPNKVTFTNILCACSHAGLVEEGRSYFSKMLAVYGIAPDVE 424

Query: 383 LNNAILDMYVKCNGLEGAKMLFDRM-VDRDSISWTTMLVGY-----AKSGEFDAAQRLFD 544
               ++D+  +   L+ A+ L + M +   + +W  +L         + GE  A +RL +
Sbjct: 425 HYGCMVDILGRAGLLDEARDLIENMPMPSPASAWGALLGSCVVHKDVQLGEL-ACKRLLE 483

Query: 545 EMPSRDIASWNALISGYEQNGR 610
             P+ D  ++  L + Y ++G+
Sbjct: 484 LEPAND-GAYILLSNLYAKSGK 504


>gb|ONK62054.1| uncharacterized protein A4U43_C08F36320 [Asparagus officinalis]
          Length = 766

 Score =  349 bits (896), Expect = e-112
 Identities = 176/239 (73%), Positives = 204/239 (85%), Gaps = 1/239 (0%)
 Frame = +2

Query: 8   RLAAALHAMALKSPPHSHDIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSII 187
           R  AALHAM  KSPPHS D+F+LNSL+H YASC  LNLSF++F  IP  H+DVVSWNSII
Sbjct: 175 RFGAALHAMVFKSPPHSSDVFVLNSLVHFYASCADLNLSFRVFSSIP--HKDVVSWNSII 232

Query: 188 AAFAQAGRWDGALDLFRQMED-AGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDG 364
            AF+Q GR D AL+LFRQM+D A + PNDVTMVSVLSAC M+GDL+FGR +HS I  ND 
Sbjct: 233 TAFSQGGRCDEALELFRQMKDTAHVRPNDVTMVSVLSACAMRGDLDFGRWLHSYIRAND- 291

Query: 365 IAECLILNNAILDMYVKCNGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFD 544
           I++ LILNNAILDMYVKC  L+ AK+LFD+MVDRDSI+WTT+LVGYAKSGEFD ++RLF+
Sbjct: 292 ISDSLILNNAILDMYVKCGSLQDAKLLFDQMVDRDSITWTTLLVGYAKSGEFDVSRRLFN 351

Query: 545 EMPSRDIASWNALISGYEQNGRPKDALALFNELQHADVEPDQVTLVAALSACSQLGAIE 721
           E+PSRDIA WNALISGYEQN RPKDALALF+EL+ AD  PDQVTLVAALSAC+QLGAI+
Sbjct: 352 EIPSRDIACWNALISGYEQNDRPKDALALFSELKDADERPDQVTLVAALSACAQLGAID 410



 Score =  116 bits (290), Expect = 6e-26
 Identities = 72/220 (32%), Positives = 111/220 (50%)
 Frame = +2

Query: 62  DIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQAGRWDGALDLFRQ 241
           D     +L+  YA  G  ++S +LF++IP   RD+  WN++I+ + Q  R   AL LF +
Sbjct: 326 DSITWTTLLVGYAKSGEFDVSRRLFNEIPS--RDIACWNALISGYEQNDRPKDALALFSE 383

Query: 242 MEDAGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLILNNAILDMYVKCN 421
           ++DA   P+ VT+V+ LSAC   G ++ G  IH+ I +N+       L  +++DMY KC 
Sbjct: 384 LKDADERPDQVTLVAALSACAQLGAIDTGCWIHAFIRKNNFHLN-FHLTTSLIDMYSKCG 442

Query: 422 GLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFDEMPSRDIASWNALISGYEQ 601
            LE A  +F+ + +RD   W+ M                               I G+  
Sbjct: 443 ELEKAVQVFESVDERDVFVWSAM-------------------------------IGGFAM 471

Query: 602 NGRPKDALALFNELQHADVEPDQVTLVAALSACSQLGAIE 721
            GR +DAL LF ++Q A V+P++VT    L ACS  G +E
Sbjct: 472 YGRGRDALGLFLQMQQAGVKPNKVTFTNILCACSHAGLVE 511



 Score = 80.9 bits (198), Expect = 9e-14
 Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 6/202 (2%)
 Frame = +2

Query: 23   LHAMALKSPPHSHDIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQ 202
            +HA   K+  H +   +  SLI  Y+ CG L  + Q+F+ +    RDV  W+++I  FA 
Sbjct: 415  IHAFIRKNNFHLN-FHLTTSLIDMYSKCGELEKAVQVFESV--DERDVFVWSAMIGGFAM 471

Query: 203  AGRWDGALDLFRQMEDAGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLI 382
             GR   AL LF QM+ AG+ PN VT  ++L AC   G +E GR   S +    GIA  + 
Sbjct: 472  YGRGRDALGLFLQMQQAGVKPNKVTFTNILCACSHAGLVEEGRSYFSKMLAVYGIAPDVE 531

Query: 383  LNNAILDMYVKCNGLEGAKMLFDRM-VDRDSISWTTMLVGY-----AKSGEFDAAQRLFD 544
                ++D+  +   L+ A+ L + M +   + +W  +L         + GE  A +RL +
Sbjct: 532  HYGCMVDILGRAGLLDEARDLIENMPMPSPASAWGALLGSCVVHKDVQLGEL-ACKRLLE 590

Query: 545  EMPSRDIASWNALISGYEQNGR 610
              P+ D  ++  L + Y ++G+
Sbjct: 591  LEPAND-GAYILLSNLYAKSGK 611


>ref|XP_009402292.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Musa acuminata subsp. malaccensis]
          Length = 749

 Score =  324 bits (830), Expect = e-103
 Identities = 164/238 (68%), Positives = 189/238 (79%)
 Frame = +2

Query: 8   RLAAALHAMALKSPPHSHDIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSII 187
           R  AALHAM  KSP    D+F+LNSL+H YA+CG  NLS ++F+KIP   RDVVSWNS I
Sbjct: 160 REGAALHAMVAKSPLLRSDVFVLNSLVHLYAACGDSNLSLRVFEKIP--ERDVVSWNSAI 217

Query: 188 AAFAQAGRWDGALDLFRQMEDAGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGI 367
            A AQ GRWD AL LF +M+   + PNDVTMVSV S CG KGDLE G+RIHS I+RND I
Sbjct: 218 TALAQGGRWDEALQLFEEMDGENVRPNDVTMVSVASVCGKKGDLELGKRIHSYIERND-I 276

Query: 368 AECLILNNAILDMYVKCNGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFDE 547
            + LIL+NA+LDM+VKC  L  A+ LFD M  +DSISWTTMLVGYAKSG+FDAA+R+FDE
Sbjct: 277 KQSLILDNALLDMFVKCGSLADAESLFDGMTTKDSISWTTMLVGYAKSGQFDAARRVFDE 336

Query: 548 MPSRDIASWNALISGYEQNGRPKDALALFNELQHADVEPDQVTLVAALSACSQLGAIE 721
           MP RDIASWNALIS YEQ+GRPK+AL LF+E QHAD  PDQVTLVAALSACSQ GA+E
Sbjct: 337 MPRRDIASWNALISCYEQSGRPKEALDLFHESQHADATPDQVTLVAALSACSQSGALE 394



 Score =  125 bits (313), Expect = 5e-29
 Identities = 71/214 (33%), Positives = 114/214 (53%)
 Frame = +2

Query: 80  SLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQAGRWDGALDLFRQMEDAGI 259
           +++  YA  G  + + ++FD++P   RD+ SWN++I+ + Q+GR   ALDLF + + A  
Sbjct: 316 TMLVGYAKSGQFDAARRVFDEMP--RRDIASWNALISCYEQSGRPKEALDLFHESQHADA 373

Query: 260 GPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLILNNAILDMYVKCNGLEGAK 439
            P+ VT+V+ LSAC   G LE G  IH+ +++N+ +     L  +++DMY KC       
Sbjct: 374 TPDQVTLVAALSACSQSGALELGCWIHAYMEKNN-LELNFHLTTSLIDMYSKC------- 425

Query: 440 MLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFDEMPSRDIASWNALISGYEQNGRPKD 619
                                   G+ D A  +F  +  RD+  W+A+I+G   +GR ++
Sbjct: 426 ------------------------GDVDKALHVFGCVSRRDVFVWSAMIAGLAMHGRGRE 461

Query: 620 ALALFNELQHADVEPDQVTLVAALSACSQLGAIE 721
           AL LF ++Q A VEP+ VT    L ACS  G +E
Sbjct: 462 ALDLFEQMQEAKVEPNTVTFTNILCACSHAGLVE 495



 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 60/196 (30%), Positives = 100/196 (51%), Gaps = 6/196 (3%)
 Frame = +2

Query: 71  ILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQAGRWDGALDLFRQMED 250
           +  SLI  Y+ CG ++ +  +F  +  S RDV  W+++IA  A  GR   ALDLF QM++
Sbjct: 414 LTTSLIDMYSKCGDVDKALHVFGCV--SRRDVFVWSAMIAGLAMHGRGREALDLFEQMQE 471

Query: 251 AGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLILNNAILDMYVKCNGLE 430
           A + PN VT  ++L AC   G +E GR   S +    GI+      + ++D+  +   LE
Sbjct: 472 AKVEPNTVTFTNILCACSHAGLVEEGRLYFSQMLPVYGISPTADHYSCMVDILGRAGRLE 531

Query: 431 GAKMLFDRM-VDRDSISWTTMLVGYA-----KSGEFDAAQRLFDEMPSRDIASWNALISG 592
            A+   + M +   + +W  +L   A     + GE    Q L  E+  R+  ++  L + 
Sbjct: 532 EARGYVENMPMPPGASAWGALLGACAVHKNVELGELACKQLL--ELEPRNHGAYVILSNL 589

Query: 593 YEQNGRPKDALALFNE 640
           Y ++GR  DA+A+  +
Sbjct: 590 YARSGR-WDAVAMLRK 604



 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 48/211 (22%), Positives = 90/211 (42%), Gaps = 1/211 (0%)
 Frame = +2

Query: 92  SYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQAGRWDGALDLFRQM-EDAGIGPN 268
           S +    L  + ++FD IP  +  + +WN II A A A     AL LF  +   +   P+
Sbjct: 85  SLSPSADLRYARRVFDHIPAPN--LFTWNIIIRAHASAPDPRLALLLFSSLLRHSPHSPD 142

Query: 269 DVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLILNNAILDMYVKCNGLEGAKMLF 448
             T    + A      L  G  +H+ + ++  +   + + N+++ +Y  C     +  +F
Sbjct: 143 KFTFPFAIKAAAELAALREGAALHAMVAKSPLLRSDVFVLNSLVHLYAACGDSNLSLRVF 202

Query: 449 DRMVDRDSISWTTMLVGYAKSGEFDAAQRLFDEMPSRDIASWNALISGYEQNGRPKDALA 628
           +++ +RD +SW + +   A+ G +D A +LF+EM                          
Sbjct: 203 EKIPERDVVSWNSAITALAQGGRWDEALQLFEEMDGE----------------------- 239

Query: 629 LFNELQHADVEPDQVTLVAALSACSQLGAIE 721
                   +V P+ VT+V+  S C + G +E
Sbjct: 240 --------NVRPNDVTMVSVASVCGKKGDLE 262


>ref|XP_008795515.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Phoenix dactylifera]
          Length = 744

 Score =  322 bits (825), Expect = e-102
 Identities = 167/238 (70%), Positives = 196/238 (82%)
 Frame = +2

Query: 8   RLAAALHAMALKSPPHSHDIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSII 187
           R  AALH M +KSP  S DIFILNSLIH YA+CGHL+LS+++F KIP   RDVVSWNS+I
Sbjct: 155 REGAALHGMVVKSPFRS-DIFILNSLIHFYAACGHLDLSYRVFQKIPA--RDVVSWNSMI 211

Query: 188 AAFAQAGRWDGALDLFRQMEDAGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGI 367
           +AFAQAG+ DGAL LF++M    + PNDVT+VSVLSACG KGDLE G+ IHS I RN  I
Sbjct: 212 SAFAQAGQCDGALQLFQEMLGENVNPNDVTVVSVLSACGKKGDLELGKWIHSYIKRN-AI 270

Query: 368 AECLILNNAILDMYVKCNGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFDE 547
            E L+L+NA+LDMY+KC  LE AK+LFD+M  RDSISWTTMLVG A+SGEFDAA+ +FD 
Sbjct: 271 DESLVLSNALLDMYIKCGSLEDAKLLFDQMSVRDSISWTTMLVGCARSGEFDAARHIFDA 330

Query: 548 MPSRDIASWNALISGYEQNGRPKDALALFNELQHADVEPDQVTLVAALSACSQLGAIE 721
           MPS DIASWNALISGYEQ+ +PK ALALF+EL  AD +PDQ+TLVAALSACSQLGA+E
Sbjct: 331 MPSHDIASWNALISGYEQSCQPKKALALFHELLQADAKPDQITLVAALSACSQLGALE 388



 Score =  101 bits (251), Expect = 9e-21
 Identities = 65/207 (31%), Positives = 102/207 (49%)
 Frame = +2

Query: 98  ASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQAGRWDGALDLFRQMEDAGIGPNDVT 277
           A  G  + +  +FD +P SH D+ SWN++I+ + Q+ +   AL LF ++  A   P+ +T
Sbjct: 316 ARSGEFDAARHIFDAMP-SH-DIASWNALISGYEQSCQPKKALALFHELLQADAKPDQIT 373

Query: 278 MVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLILNNAILDMYVKCNGLEGAKMLFDRM 457
           +V+ LSAC   G LE G  IH+ + +N        L  +++DMY KC             
Sbjct: 374 LVAALSACSQLGALELGCWIHAHMKKNRFNLNSH-LTTSLVDMYSKC------------- 419

Query: 458 VDRDSISWTTMLVGYAKSGEFDAAQRLFDEMPSRDIASWNALISGYEQNGRPKDALALFN 637
                             G+ D A  LF     RD+  W+A+I+G   +G+ K +L LF 
Sbjct: 420 ------------------GDLDKALELFRSAEQRDVFVWSAMIAGLAMHGKGKASLDLFM 461

Query: 638 ELQHADVEPDQVTLVAALSACSQLGAI 718
           ++Q A V+P++VT    L ACS  G +
Sbjct: 462 QMQEAKVKPNKVTFTNILCACSHAGLV 488


>gb|PKA55094.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
          Length = 736

 Score =  315 bits (808), Expect = e-100
 Identities = 159/236 (67%), Positives = 189/236 (80%)
 Frame = +2

Query: 11  LAAALHAMALKSPPHSHDIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIA 190
           + AA+H   +KSP HS D+FILNSLIH YA+CG L+L+ ++FD IP   RDVVSWNS+I 
Sbjct: 148 VGAAIHGQVIKSPFHS-DVFILNSLIHFYAACGDLDLARKVFDNIP--QRDVVSWNSLIT 204

Query: 191 AFAQAGRWDGALDLFRQMEDAGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIA 370
           A A A R D AL+LF++MED G+ PNDVTMVSVLSACG KGDL+ G+ IH  I R+  I 
Sbjct: 205 AMAHADRLDDALELFQRMEDDGVDPNDVTMVSVLSACGKKGDLQLGKWIHFYIKRSR-IT 263

Query: 371 ECLILNNAILDMYVKCNGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFDEM 550
           ECLILNNAILDMYVKC  LE AK LF+RM ++DSISWTTMLVG  K  EFD A+ +FDEM
Sbjct: 264 ECLILNNAILDMYVKCESLEDAKALFERMTEKDSISWTTMLVGCLKKSEFDVARNMFDEM 323

Query: 551 PSRDIASWNALISGYEQNGRPKDALALFNELQHADVEPDQVTLVAALSACSQLGAI 718
           P+RD+ +WNALISGYEQNGRPK+ALA F+ELQ +D  PDQVT+VA LSACSQLGA+
Sbjct: 324 PTRDVTAWNALISGYEQNGRPKEALAAFSELQDSDSRPDQVTIVAVLSACSQLGAV 379



 Score =  109 bits (272), Expect = 1e-23
 Identities = 64/197 (32%), Positives = 104/197 (52%)
 Frame = +2

Query: 131 LFDKIPCSHRDVVSWNSIIAAFAQAGRWDGALDLFRQMEDAGIGPNDVTMVSVLSACGMK 310
           +FD++P   RDV +WN++I+ + Q GR   AL  F +++D+   P+ VT+V+VLSAC   
Sbjct: 319 MFDEMPT--RDVTAWNALISGYEQNGRPKEALAAFSELQDSDSRPDQVTIVAVLSACSQL 376

Query: 311 GDLEFGRRIHSCIDRNDGIAECLILNNAILDMYVKCNGLEGAKMLFDRMVDRDSISWTTM 490
           G +  G+ IHS I +N G      L  +++DMY KC                        
Sbjct: 377 GAVGAGKWIHSYIKKN-GFDLNYHLTTSLIDMYSKC------------------------ 411

Query: 491 LVGYAKSGEFDAAQRLFDEMPSRDIASWNALISGYEQNGRPKDALALFNELQHADVEPDQ 670
                  G+ + A ++F  +  RD+  W+++I+G+  +GR + AL LF E++  +++P  
Sbjct: 412 -------GDLENAIKVFRSVKQRDVFVWSSMIAGFAMHGRGEQALDLFKEMEEENIKPTH 464

Query: 671 VTLVAALSACSQLGAIE 721
           VTL   L ACS  G +E
Sbjct: 465 VTLTNILCACSHGGLVE 481



 Score = 85.5 bits (210), Expect = 2e-15
 Identities = 68/242 (28%), Positives = 107/242 (44%), Gaps = 2/242 (0%)
 Frame = +2

Query: 2   DSRLAAALHAMALKSPPHSHDIFILNSLIHSYASCG-HLNLSFQLFDKIPCSHRDVVSWN 178
           D      +HA  L+    SH       L  S+ S   +L  + Q+FD+IP    ++ SWN
Sbjct: 41  DDARVKQIHARMLRYDLFSHPYAASRLLTASFFSPSPNLPYALQMFDQIP--RPNLYSWN 98

Query: 179 SIIAAFAQAGRWDGALDLF-RQMEDAGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDR 355
             I A A   R D +L LF R + D+   P+  T    + A         G  IH  + +
Sbjct: 99  VAIRAQASGDRPDLSLLLFSRLLSDSPHSPDRFTFPFAVKAASELVLPWVGAAIHGQVIK 158

Query: 356 NDGIAECLILNNAILDMYVKCNGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQR 535
           +   ++  ILN+                                ++  YA  G+ D A++
Sbjct: 159 SPFHSDVFILNS--------------------------------LIHFYAACGDLDLARK 186

Query: 536 LFDEMPSRDIASWNALISGYEQNGRPKDALALFNELQHADVEPDQVTLVAALSACSQLGA 715
           +FD +P RD+ SWN+LI+      R  DAL LF  ++   V+P+ VT+V+ LSAC + G 
Sbjct: 187 VFDNIPQRDVVSWNSLITAMAHADRLDDALELFQRMEDDGVDPNDVTMVSVLSACGKKGD 246

Query: 716 IE 721
           ++
Sbjct: 247 LQ 248



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 57/187 (30%), Positives = 92/187 (49%), Gaps = 4/187 (2%)
 Frame = +2

Query: 71  ILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQAGRWDGALDLFRQMED 250
           +  SLI  Y+ CG L  + ++F  +    RDV  W+S+IA FA  GR + ALDLF++ME+
Sbjct: 400 LTTSLIDMYSKCGDLENAIKVFRSV--KQRDVFVWSSMIAGFAMHGRGEQALDLFKEMEE 457

Query: 251 AGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLILNNAILDMYVKCNGLE 430
             I P  VT+ ++L AC   G +E G+   S +     I   +     + D+  +   LE
Sbjct: 458 ENIKPTHVTLTNILCACSHGGLVEEGKAYFSKMLPLYNIPPDIEHYGCMADILGRAGRLE 517

Query: 431 GAKMLFDRM-VDRDSISWTTMLVGYAKSGEFD---AAQRLFDEMPSRDIASWNALISGYE 598
            A+ L + M +   + +W  +L      G+ D    A R   E+  R+   +  L + Y 
Sbjct: 518 EARELIETMPMPPPASAWGALLGACVVHGDVDIGEIASRKLLELEPRNDGGYVLLSNLYA 577

Query: 599 QNGRPKD 619
           + GR +D
Sbjct: 578 KAGRWED 584


>ref|XP_010909905.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Elaeis guineensis]
          Length = 741

 Score =  311 bits (796), Expect = 4e-98
 Identities = 165/235 (70%), Positives = 191/235 (81%)
 Frame = +2

Query: 17  AALHAMALKSPPHSHDIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAF 196
           AALH M +KSP  S DIFILNSLIH YA+CGHL+LS+Q+F KIP   RDVVSWNS+I+AF
Sbjct: 155 AALHGMVVKSPFRS-DIFILNSLIHFYAACGHLDLSYQVFRKIP--GRDVVSWNSMISAF 211

Query: 197 AQAGRWDGALDLFRQMEDAGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAEC 376
           AQAG+   A+ LF++M    + PNDVT+VSVLSACG KGDLE G+ IHSCI R   I E 
Sbjct: 212 AQAGKCGEAVQLFQEMVGENVSPNDVTVVSVLSACGKKGDLESGKWIHSCIKRY-AIEET 270

Query: 377 LILNNAILDMYVKCNGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFDEMPS 556
           +IL+NA+LDMYVKC  LE AK+LFD M  RDSISWTTMLVG A+SGEFDAA+ +FD MPS
Sbjct: 271 VILSNAMLDMYVKCGSLEDAKLLFDHMSARDSISWTTMLVGCARSGEFDAARHIFDVMPS 330

Query: 557 RDIASWNALISGYEQNGRPKDALALFNELQHADVEPDQVTLVAALSACSQLGAIE 721
            DIASWNALISGYEQ+ +PK ALALF+EL  A  +PDQVTLVAALSACSQLGA+E
Sbjct: 331 HDIASWNALISGYEQSCQPKKALALFHELLKAGGKPDQVTLVAALSACSQLGALE 385



 Score =  107 bits (268), Expect = 5e-23
 Identities = 70/222 (31%), Positives = 110/222 (49%)
 Frame = +2

Query: 56  SHDIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQAGRWDGALDLF 235
           + D     +++   A  G  + +  +FD +P SH D+ SWN++I+ + Q+ +   AL LF
Sbjct: 299 ARDSISWTTMLVGCARSGEFDAARHIFDVMP-SH-DIASWNALISGYEQSCQPKKALALF 356

Query: 236 RQMEDAGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLILNNAILDMYVK 415
            ++  AG  P+ VT+V+ LSAC   G LE G  IH+ I +N+       L  +++DMY K
Sbjct: 357 HELLKAGGKPDQVTLVAALSACSQLGALELGCWIHAHIKKNNFNLNSH-LTTSLIDMYSK 415

Query: 416 CNGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFDEMPSRDIASWNALISGY 595
           C                               G+ D A  LF  M  RD+  W+A+I+G 
Sbjct: 416 C-------------------------------GDLDKALELFRSMEQRDVFVWSAMIAGL 444

Query: 596 EQNGRPKDALALFNELQHADVEPDQVTLVAALSACSQLGAIE 721
             +G  K +L LF ++Q A V+P++VT    L ACS  G ++
Sbjct: 445 AMHGNGKASLDLFMQMQEAKVKPNKVTFTNILCACSHAGLVD 486



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 44/129 (34%), Positives = 70/129 (54%)
 Frame = +2

Query: 71  ILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQAGRWDGALDLFRQMED 250
           +  SLI  Y+ CG L+ + +LF  +    RDV  W+++IA  A  G    +LDLF QM++
Sbjct: 405 LTTSLIDMYSKCGDLDKALELFRSM--EQRDVFVWSAMIAGLAMHGNGKASLDLFMQMQE 462

Query: 251 AGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLILNNAILDMYVKCNGLE 430
           A + PN VT  ++L AC   G ++ GR   S +    GIA+ +     ++D+  +   L+
Sbjct: 463 AKVKPNKVTFTNILCACSHAGLVDEGRSYFSQMLLVYGIAQNVEHYGCMIDILGRAGLLQ 522

Query: 431 GAKMLFDRM 457
            AK L + M
Sbjct: 523 EAKELIEDM 531


>ref|XP_020695322.1| pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic isoform X2 [Dendrobium catenatum]
          Length = 712

 Score =  307 bits (787), Expect = 5e-97
 Identities = 161/238 (67%), Positives = 186/238 (78%)
 Frame = +2

Query: 8   RLAAALHAMALKSPPHSHDIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSII 187
           R  + LH + +KSP  S D+FILNSL+H YA+CG LNLS  +FD IP   +DVVSWNS+I
Sbjct: 147 REGSTLHGLVIKSPFRS-DVFILNSLVHFYAACGCLNLSRLVFDHIP--QKDVVSWNSMI 203

Query: 188 AAFAQAGRWDGALDLFRQMEDAGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGI 367
            A A+   ++ AL+LF+ ME +G  PNDVTMVSVLSACG KGDLE GR IHS I  N+ I
Sbjct: 204 TALARTDHYNDALNLFQVMEQSGFMPNDVTMVSVLSACGRKGDLELGRWIHSYIKENE-I 262

Query: 368 AECLILNNAILDMYVKCNGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFDE 547
            +CLILNNAILDMY KC     A  LFD M ++DSISWTTMLV YAKS EFDAA+R+FDE
Sbjct: 263 TQCLILNNAILDMYTKCGNSADASFLFDSMKEKDSISWTTMLVAYAKSHEFDAARRVFDE 322

Query: 548 MPSRDIASWNALISGYEQNGRPKDALALFNELQHADVEPDQVTLVAALSACSQLGAIE 721
           MP RDIA WNALISGYEQNGRPK+AL  FNELQ A+VEP+ +TLVAALSACSQLGAIE
Sbjct: 323 MPYRDIAVWNALISGYEQNGRPKEALDAFNELQDANVEPNHLTLVAALSACSQLGAIE 380



 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 57/181 (31%), Positives = 86/181 (47%), Gaps = 6/181 (3%)
 Frame = +2

Query: 95  YASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQAGRWDGALDLFRQMEDAGIGPNDV 274
           Y+ CG L  +  +F  +    RDV  W+S+IA  A  G    AL+ F++M++A + PN V
Sbjct: 384 YSKCGDLENALSVFRSV--KKRDVFVWSSMIAGLAMHGMGKEALNFFKEMQEAKVKPNHV 441

Query: 275 TMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLILNNAILDMYVKCNGLEGAKMLFDR 454
           T  ++LSAC   G +E GR   S +    GIA  +     ++D+  +   LE A  L   
Sbjct: 442 TFTNILSACSHAGLVEEGRMYFSQMLPLYGIAPDIEHYGCMVDILGRAGRLEEAMELIKS 501

Query: 455 M-VDRDSISWTTMLVGY-----AKSGEFDAAQRLFDEMPSRDIASWNALISGYEQNGRPK 616
           M V   + +W  +L         K GE  A Q L    P  D  ++  L + Y + GR +
Sbjct: 502 MPVPAPASAWGALLGACVVHRDVKLGEL-ACQNLLGLEPRND-GAYVLLSNLYAKAGRWE 559

Query: 617 D 619
           D
Sbjct: 560 D 560


>ref|XP_020695320.1| pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic isoform X1 [Dendrobium catenatum]
 gb|PKU71494.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
          Length = 736

 Score =  307 bits (787), Expect = 8e-97
 Identities = 161/238 (67%), Positives = 186/238 (78%)
 Frame = +2

Query: 8   RLAAALHAMALKSPPHSHDIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSII 187
           R  + LH + +KSP  S D+FILNSL+H YA+CG LNLS  +FD IP   +DVVSWNS+I
Sbjct: 147 REGSTLHGLVIKSPFRS-DVFILNSLVHFYAACGCLNLSRLVFDHIP--QKDVVSWNSMI 203

Query: 188 AAFAQAGRWDGALDLFRQMEDAGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGI 367
            A A+   ++ AL+LF+ ME +G  PNDVTMVSVLSACG KGDLE GR IHS I  N+ I
Sbjct: 204 TALARTDHYNDALNLFQVMEQSGFMPNDVTMVSVLSACGRKGDLELGRWIHSYIKENE-I 262

Query: 368 AECLILNNAILDMYVKCNGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFDE 547
            +CLILNNAILDMY KC     A  LFD M ++DSISWTTMLV YAKS EFDAA+R+FDE
Sbjct: 263 TQCLILNNAILDMYTKCGNSADASFLFDSMKEKDSISWTTMLVAYAKSHEFDAARRVFDE 322

Query: 548 MPSRDIASWNALISGYEQNGRPKDALALFNELQHADVEPDQVTLVAALSACSQLGAIE 721
           MP RDIA WNALISGYEQNGRPK+AL  FNELQ A+VEP+ +TLVAALSACSQLGAIE
Sbjct: 323 MPYRDIAVWNALISGYEQNGRPKEALDAFNELQDANVEPNHLTLVAALSACSQLGAIE 380



 Score =  119 bits (299), Expect = 4e-27
 Identities = 70/214 (32%), Positives = 110/214 (51%)
 Frame = +2

Query: 80  SLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQAGRWDGALDLFRQMEDAGI 259
           +++ +YA     + + ++FD++P  +RD+  WN++I+ + Q GR   ALD F +++DA +
Sbjct: 302 TMLVAYAKSHEFDAARRVFDEMP--YRDIAVWNALISGYEQNGRPKEALDAFNELQDANV 359

Query: 260 GPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLILNNAILDMYVKCNGLEGAK 439
            PN +T+V+ LSAC   G +E G+ IHS + RN        L  +++DMY KC  LE A 
Sbjct: 360 EPNHLTLVAALSACSQLGAIETGKCIHSYM-RNHSFDLNYHLTTSLVDMYSKCGDLENAL 418

Query: 440 MLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFDEMPSRDIASWNALISGYEQNGRPKD 619
            +F  +  RD   W++M+ G A                                +G  K+
Sbjct: 419 SVFRSVKKRDVFVWSSMIAGLA-------------------------------MHGMGKE 447

Query: 620 ALALFNELQHADVEPDQVTLVAALSACSQLGAIE 721
           AL  F E+Q A V+P+ VT    LSACS  G +E
Sbjct: 448 ALNFFKEMQEAKVKPNHVTFTNILSACSHAGLVE 481



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 62/197 (31%), Positives = 94/197 (47%), Gaps = 8/197 (4%)
 Frame = +2

Query: 53  HSHDI--FILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQAGRWDGAL 226
           HS D+   +  SL+  Y+ CG L  +  +F  +    RDV  W+S+IA  A  G    AL
Sbjct: 392 HSFDLNYHLTTSLVDMYSKCGDLENALSVFRSV--KKRDVFVWSSMIAGLAMHGMGKEAL 449

Query: 227 DLFRQMEDAGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLILNNAILDM 406
           + F++M++A + PN VT  ++LSAC   G +E GR   S +    GIA  +     ++D+
Sbjct: 450 NFFKEMQEAKVKPNHVTFTNILSACSHAGLVEEGRMYFSQMLPLYGIAPDIEHYGCMVDI 509

Query: 407 YVKCNGLEGAKMLFDRM-VDRDSISWTTMLVGY-----AKSGEFDAAQRLFDEMPSRDIA 568
             +   LE A  L   M V   + +W  +L         K GE  A Q L    P  D  
Sbjct: 510 LGRAGRLEEAMELIKSMPVPAPASAWGALLGACVVHRDVKLGEL-ACQNLLGLEPRND-G 567

Query: 569 SWNALISGYEQNGRPKD 619
           ++  L + Y + GR +D
Sbjct: 568 AYVLLSNLYAKAGRWED 584


>ref|XP_020585876.1| pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic isoform X3 [Phalaenopsis equestris]
          Length = 682

 Score =  295 bits (756), Expect = 1e-92
 Identities = 156/236 (66%), Positives = 185/236 (78%), Gaps = 1/236 (0%)
 Frame = +2

Query: 17  AALHAMALKSPPHSHDIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAF 196
           +ALH + +KSP HS D+FILNSL+H YA CG L+LS Q+FD IP   +DVVSWNS+I A 
Sbjct: 151 SALHGLVIKSPFHS-DVFILNSLVHFYAVCGCLDLSRQVFDFIP--QKDVVSWNSMITAL 207

Query: 197 AQAGRWDGALDLFRQMEDAGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAEC 376
            +A R + AL+LF+ ME +G  PNDVTMVS+LSACG KG+LE G  +HS I +N GI +C
Sbjct: 208 VRADRCNDALELFKAMEQSGFAPNDVTMVSLLSACGKKGNLELGWWMHSYIKQN-GIKQC 266

Query: 377 LILNNAILDMYVKCNGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFDEMPS 556
           LILNNAILDMY KC     A +LF+ M  +DSISWTTMLV YAKS EFDAA+R+FDEMP 
Sbjct: 267 LILNNAILDMYAKCGSSADASLLFNSMKKKDSISWTTMLVAYAKSFEFDAARRVFDEMPH 326

Query: 557 RDIASWNALISGYEQNGRPKDALALFNELQH-ADVEPDQVTLVAALSACSQLGAIE 721
           RD A WNALISGYEQNGRPKDALA FNEL+  A +EPD++T VAALSACSQL A+E
Sbjct: 327 RDTAVWNALISGYEQNGRPKDALAAFNELRDVAKLEPDELTFVAALSACSQLCALE 382


>ref|XP_020585869.1| pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic isoform X2 [Phalaenopsis equestris]
          Length = 717

 Score =  295 bits (756), Expect = 2e-92
 Identities = 156/236 (66%), Positives = 185/236 (78%), Gaps = 1/236 (0%)
 Frame = +2

Query: 17  AALHAMALKSPPHSHDIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAF 196
           +ALH + +KSP HS D+FILNSL+H YA CG L+LS Q+FD IP   +DVVSWNS+I A 
Sbjct: 151 SALHGLVIKSPFHS-DVFILNSLVHFYAVCGCLDLSRQVFDFIP--QKDVVSWNSMITAL 207

Query: 197 AQAGRWDGALDLFRQMEDAGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAEC 376
            +A R + AL+LF+ ME +G  PNDVTMVS+LSACG KG+LE G  +HS I +N GI +C
Sbjct: 208 VRADRCNDALELFKAMEQSGFAPNDVTMVSLLSACGKKGNLELGWWMHSYIKQN-GIKQC 266

Query: 377 LILNNAILDMYVKCNGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFDEMPS 556
           LILNNAILDMY KC     A +LF+ M  +DSISWTTMLV YAKS EFDAA+R+FDEMP 
Sbjct: 267 LILNNAILDMYAKCGSSADASLLFNSMKKKDSISWTTMLVAYAKSFEFDAARRVFDEMPH 326

Query: 557 RDIASWNALISGYEQNGRPKDALALFNELQH-ADVEPDQVTLVAALSACSQLGAIE 721
           RD A WNALISGYEQNGRPKDALA FNEL+  A +EPD++T VAALSACSQL A+E
Sbjct: 327 RDTAVWNALISGYEQNGRPKDALAAFNELRDVAKLEPDELTFVAALSACSQLCALE 382



 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 56/185 (30%), Positives = 92/185 (49%), Gaps = 4/185 (2%)
 Frame = +2

Query: 77  NSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQAGRWDGALDLFRQMEDAG 256
           ++LI  Y+ CG L  + ++F  +  + RDV  W+S+IA  A  GR   A+DLF++M+ A 
Sbjct: 383 SALIDMYSKCGDLENAVEVFRSV--NKRDVFVWSSMIAGLAMHGRGMEAMDLFKEMQVAK 440

Query: 257 IGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLILNNAILDMYVKCNGLEGA 436
           + PN VT  ++LSAC   G +E GR   + +    GIA  +     + D+  +   LE A
Sbjct: 441 VKPNHVTFTNILSACSHAGLVEEGRMYFTKMLPLYGIAPQIEHYGCMADILGRAGRLEEA 500

Query: 437 KMLFDRMVDRDSIS-WTTMLVGYAKSGEF---DAAQRLFDEMPSRDIASWNALISGYEQN 604
           + L   M  +   S W  +L      G+    + A     E+  R+  ++  L + Y + 
Sbjct: 501 RELIKSMPFQPPASAWGALLGACVVHGDVLLGELACHKLLELEPRNDGAYVLLSNLYAKA 560

Query: 605 GRPKD 619
           GR +D
Sbjct: 561 GRWED 565


>ref|XP_020585861.1| pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic isoform X1 [Phalaenopsis equestris]
          Length = 738

 Score =  295 bits (756), Expect = 3e-92
 Identities = 156/236 (66%), Positives = 185/236 (78%), Gaps = 1/236 (0%)
 Frame = +2

Query: 17  AALHAMALKSPPHSHDIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAF 196
           +ALH + +KSP HS D+FILNSL+H YA CG L+LS Q+FD IP   +DVVSWNS+I A 
Sbjct: 151 SALHGLVIKSPFHS-DVFILNSLVHFYAVCGCLDLSRQVFDFIP--QKDVVSWNSMITAL 207

Query: 197 AQAGRWDGALDLFRQMEDAGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAEC 376
            +A R + AL+LF+ ME +G  PNDVTMVS+LSACG KG+LE G  +HS I +N GI +C
Sbjct: 208 VRADRCNDALELFKAMEQSGFAPNDVTMVSLLSACGKKGNLELGWWMHSYIKQN-GIKQC 266

Query: 377 LILNNAILDMYVKCNGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFDEMPS 556
           LILNNAILDMY KC     A +LF+ M  +DSISWTTMLV YAKS EFDAA+R+FDEMP 
Sbjct: 267 LILNNAILDMYAKCGSSADASLLFNSMKKKDSISWTTMLVAYAKSFEFDAARRVFDEMPH 326

Query: 557 RDIASWNALISGYEQNGRPKDALALFNELQH-ADVEPDQVTLVAALSACSQLGAIE 721
           RD A WNALISGYEQNGRPKDALA FNEL+  A +EPD++T VAALSACSQL A+E
Sbjct: 327 RDTAVWNALISGYEQNGRPKDALAAFNELRDVAKLEPDELTFVAALSACSQLCALE 382



 Score =  110 bits (275), Expect = 6e-24
 Identities = 73/240 (30%), Positives = 116/240 (48%), Gaps = 1/240 (0%)
 Frame = +2

Query: 5   SRLAAALHAMALKSPPHSHDIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSI 184
           ++  ++  A  L +     D     +++ +YA     + + ++FD++P  HRD   WN++
Sbjct: 278 AKCGSSADASLLFNSMKKKDSISWTTMLVAYAKSFEFDAARRVFDEMP--HRDTAVWNAL 335

Query: 185 IAAFAQAGRWDGALDLFRQMED-AGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRND 361
           I+ + Q GR   AL  F ++ D A + P+++T V+ LSAC     LE G+RIHS +  N 
Sbjct: 336 ISGYEQNGRPKDALAAFNELRDVAKLEPDELTFVAALSACSQLCALESGKRIHSHLKSNS 395

Query: 362 GIAECLILNNAILDMYVKCNGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLF 541
            +     L  A++DMY KC  LE A  +F  +  RD   W++M+ G A            
Sbjct: 396 FVLN-YHLATALIDMYSKCGDLENAVEVFRSVNKRDVFVWSSMIAGLA------------ 442

Query: 542 DEMPSRDIASWNALISGYEQNGRPKDALALFNELQHADVEPDQVTLVAALSACSQLGAIE 721
                               +GR  +A+ LF E+Q A V+P+ VT    LSACS  G +E
Sbjct: 443 -------------------MHGRGMEAMDLFKEMQVAKVKPNHVTFTNILSACSHAGLVE 483



 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 67/217 (30%), Positives = 106/217 (48%), Gaps = 14/217 (6%)
 Frame = +2

Query: 11   LAAALHAMALKSPP--HSH---DIFILN-----SLIHSYASCGHLNLSFQLFDKIPCSHR 160
            L+A     AL+S    HSH   + F+LN     +LI  Y+ CG L  + ++F  +  + R
Sbjct: 372  LSACSQLCALESGKRIHSHLKSNSFVLNYHLATALIDMYSKCGDLENAVEVFRSV--NKR 429

Query: 161  DVVSWNSIIAAFAQAGRWDGALDLFRQMEDAGIGPNDVTMVSVLSACGMKGDLEFGRRIH 340
            DV  W+S+IA  A  GR   A+DLF++M+ A + PN VT  ++LSAC   G +E GR   
Sbjct: 430  DVFVWSSMIAGLAMHGRGMEAMDLFKEMQVAKVKPNHVTFTNILSACSHAGLVEEGRMYF 489

Query: 341  SCIDRNDGIAECLILNNAILDMYVKCNGLEGAKMLFDRMVDRDSIS-WTTMLVGYAKSGE 517
            + +    GIA  +     + D+  +   LE A+ L   M  +   S W  +L      G+
Sbjct: 490  TKMLPLYGIAPQIEHYGCMADILGRAGRLEEARELIKSMPFQPPASAWGALLGACVVHGD 549

Query: 518  F---DAAQRLFDEMPSRDIASWNALISGYEQNGRPKD 619
                + A     E+  R+  ++  L + Y + GR +D
Sbjct: 550  VLLGELACHKLLELEPRNDGAYVLLSNLYAKAGRWED 586


>gb|OVA06499.1| Pentatricopeptide repeat [Macleaya cordata]
          Length = 726

 Score =  287 bits (734), Expect = 5e-89
 Identities = 150/241 (62%), Positives = 185/241 (76%), Gaps = 1/241 (0%)
 Frame = +2

Query: 2   DSRLAAALHAMALKSPPHSHDIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNS 181
           D R     H MA+K+   S D++ILNSLIH YA+CG LN +++LF KIP   RDVVSWNS
Sbjct: 134 DLRQGELFHGMAIKASLDS-DVYILNSLIHFYAACGDLNQAYKLFLKIP--KRDVVSWNS 190

Query: 182 IIAAFAQAGRWDGALDLFRQMEDAGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRND 361
           +I  FAQA   D AL+LFR+ME+  + PNDVTMVSVLSAC  K +L FGR +HS I++N 
Sbjct: 191 MITGFAQADCPDEALELFREMEEENMKPNDVTMVSVLSACSKKSNLAFGRWVHSYIEKN- 249

Query: 362 GIAECLILNNAILDMYVKCNGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLF 541
           GI E LILNNAILDMY+KC  LE AK +FD+M +RD ISWTTMLVGY   GEFDAA  +F
Sbjct: 250 GIEESLILNNAILDMYIKCGSLEEAKRIFDKMPERDPISWTTMLVGYTSFGEFDAAHHVF 309

Query: 542 DEMPSRDIASWNALISGYEQNGRPKDALALFNELQ-HADVEPDQVTLVAALSACSQLGAI 718
           +EMPS+DIA+WN+LIS YEQ+G+P+ ALA+F+ELQ     +PDQVTLV+ LSAC+QLGA 
Sbjct: 310 NEMPSQDIAAWNSLISAYEQSGQPRQALAIFHELQLSKKAKPDQVTLVSTLSACAQLGAT 369

Query: 719 E 721
           +
Sbjct: 370 D 370



 Score =  105 bits (262), Expect = 3e-22
 Identities = 62/215 (28%), Positives = 109/215 (50%), Gaps = 1/215 (0%)
 Frame = +2

Query: 80  SLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQAGRWDGALDLFRQME-DAG 256
           +++  Y S G  + +  +F+++P   +D+ +WNS+I+A+ Q+G+   AL +F +++    
Sbjct: 291 TMLVGYTSFGEFDAAHHVFNEMPS--QDIAAWNSLISAYEQSGQPRQALAIFHELQLSKK 348

Query: 257 IGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLILNNAILDMYVKCNGLEGA 436
             P+ VT+VS LSAC   G  + G  IH  + +  G+     L  +++DMY KC      
Sbjct: 349 AKPDQVTLVSTLSACAQLGATDLGGWIHVYV-KKQGLKLNCHLTTSLIDMYAKC------ 401

Query: 437 KMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFDEMPSRDIASWNALISGYEQNGRPK 616
                                    G+ + A  +F     +D+  W+A+I+G   +GR +
Sbjct: 402 -------------------------GDLEKALEVFQFAERKDVYVWSAMIAGLAMHGRGR 436

Query: 617 DALALFNELQHADVEPDQVTLVAALSACSQLGAIE 721
           DA+ LF ++Q A V+P++VT    L ACS  G +E
Sbjct: 437 DAIDLFLDMQEAKVKPNEVTFTNVLCACSHAGLVE 471



 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 4/184 (2%)
 Frame = +2

Query: 71  ILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQAGRWDGALDLFRQMED 250
           +  SLI  YA CG L  + ++F       +DV  W+++IA  A  GR   A+DLF  M++
Sbjct: 390 LTTSLIDMYAKCGDLEKALEVFQF--AERKDVYVWSAMIAGLAMHGRGRDAIDLFLDMQE 447

Query: 251 AGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLILNNAILDMYVKCNGLE 430
           A + PN+VT  +VL AC   G +E G+   + +    GIA  +     ++D+  +   LE
Sbjct: 448 AKVKPNEVTFTNVLCACSHAGLVEEGKLYFNQMLPVYGIAPQMKHYGCMVDILGRAGLLE 507

Query: 431 GAKMLFDRM-VDRDSISWTTMLVGYAKSGEFDAAQRLFD---EMPSRDIASWNALISGYE 598
            A  L ++M +   +  W  +L      G    A++  +   E+  R+  ++  L + Y 
Sbjct: 508 EAMELIEKMPIVPGASVWGALLGACRTHGNIGLAEQACNRLLELEPRNHGAYVLLSNIYA 567

Query: 599 QNGR 610
           + G+
Sbjct: 568 KFGK 571


>ref|XP_021973810.1| pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Helianthus annuus]
 gb|OTG36786.1| putative tetratricopeptide repeat (TPR)-like superfamily protein
           [Helianthus annuus]
          Length = 749

 Score =  272 bits (695), Expect = 4e-83
 Identities = 141/241 (58%), Positives = 182/241 (75%), Gaps = 1/241 (0%)
 Frame = +2

Query: 2   DSRLAAALHAMALKSPPHSHDIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNS 181
           D R+   +H M +K    S D+FILNSLIH YASCGHL+ ++++F  IP   RDVVSWNS
Sbjct: 157 DIRVGKVIHGMVVKMSLGS-DVFILNSLIHFYASCGHLDSAYRVFINIPV--RDVVSWNS 213

Query: 182 IIAAFAQAGRWDGALDLFRQMEDAGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRND 361
           II  FAQ  R D AL LF +M+  G+ P++VTM+SVL+AC  K DL+FGR +HS I++N 
Sbjct: 214 IITGFAQGDRADDALRLFHEMQGDGLRPDNVTMMSVLTACTKKLDLKFGRWVHSYIEKN- 272

Query: 362 GIAECLILNNAILDMYVKCNGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLF 541
           GI   L LNNA+LDMY KC  +E A+ LFD+M ++D +SWTTMLVGYAKSG + AA+R F
Sbjct: 273 GIRGSLNLNNALLDMYAKCGSVEDAQKLFDKMPEKDIVSWTTMLVGYAKSGHYIAARRHF 332

Query: 542 DEMPSRDIASWNALISGYEQNGRPKDALALFNELQHAD-VEPDQVTLVAALSACSQLGAI 718
           + MP +DIA+WNALIS YEQ+G PK+ALA+FNELQ  +  EPD VTLV+ LSAC+Q+GA+
Sbjct: 333 ESMPDQDIAAWNALISAYEQSGNPKEALAIFNELQLTNKAEPDNVTLVSTLSACAQVGAM 392

Query: 719 E 721
           +
Sbjct: 393 D 393



 Score =  104 bits (260), Expect = 6e-22
 Identities = 61/221 (27%), Positives = 114/221 (51%), Gaps = 1/221 (0%)
 Frame = +2

Query: 62  DIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQAGRWDGALDLFRQ 241
           DI    +++  YA  GH   + + F+ +P   +D+ +WN++I+A+ Q+G    AL +F +
Sbjct: 308 DIVSWTTMLVGYAKSGHYIAARRHFESMP--DQDIAAWNALISAYEQSGNPKEALAIFNE 365

Query: 242 MEDAGIG-PNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLILNNAILDMYVKC 418
           ++      P++VT+VS LSAC   G ++ G  IH                     +Y+K 
Sbjct: 366 LQLTNKAEPDNVTLVSTLSACAQVGAMDMGGWIH---------------------VYIKK 404

Query: 419 NGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFDEMPSRDIASWNALISGYE 598
           + ++ ++ L   ++D            Y+K G+ + A  +F+    +D+  W+A+I+G  
Sbjct: 405 HNIKLSRHLITSLIDM-----------YSKCGDLNKALEVFNSSDDKDVFIWSAMIAGLA 453

Query: 599 QNGRPKDALALFNELQHADVEPDQVTLVAALSACSQLGAIE 721
            +G  +DA+ LF ++Q A+V+P+ VT    L ACS  G ++
Sbjct: 454 MHGHGRDAIELFEKMQEANVKPNGVTFTNLLCACSHTGLLQ 494



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 60/242 (24%), Positives = 112/242 (46%), Gaps = 7/242 (2%)
 Frame = +2

Query: 2   DSRLAAALHAMALKSPPHSHDIFILNSLIHSYA--SCGHLNLSFQLFDKIPCSHRDVVSW 175
           +S+    +HA  L++    +D F  ++LI ++A      ++ + +LFD++P    +V +W
Sbjct: 49  NSKQLKQIHAQMLRNGLF-YDPFSASTLISAFALSPLQDIDYAHKLFDEMP--EPNVYTW 105

Query: 176 NSIIAAFAQAGRWDGALDLFRQMEDA-----GIGPNDVTMVSVLSACGMKGDLEFGRRIH 340
           N +I A++ +     +L +F QM +       + PN  T   V+ A     D+  G+ IH
Sbjct: 106 NVLIRAYSSSQTPIQSLLMFTQMINLYKSCNEVSPNKFTYPFVIKAAAELLDIRVGKVIH 165

Query: 341 SCIDRNDGIAECLILNNAILDMYVKCNGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEF 520
             + +    ++  IL N+++  Y  C  L+ A  +F  +  RD +SW +++ G+A+    
Sbjct: 166 GMVVKMSLGSDVFIL-NSLIHFYASCGHLDSAYRVFINIPVRDVVSWNSIITGFAQGDRA 224

Query: 521 DAAQRLFDEMPSRDIASWNALISGYEQNGRPKDALALFNELQHADVEPDQVTLVAALSAC 700
           D A RLF EM                               Q   + PD VT+++ L+AC
Sbjct: 225 DDALRLFHEM-------------------------------QGDGLRPDNVTMMSVLTAC 253

Query: 701 SQ 706
           ++
Sbjct: 254 TK 255



 Score = 69.3 bits (168), Expect = 8e-10
 Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 1/170 (0%)
 Frame = +2

Query: 71  ILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQAGRWDGALDLFRQMED 250
           ++ SLI  Y+ CG LN + ++F+      +DV  W+++IA  A  G    A++LF +M++
Sbjct: 413 LITSLIDMYSKCGDLNKALEVFNS--SDDKDVFIWSAMIAGLAMHGHGRDAIELFEKMQE 470

Query: 251 AGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLILNNAILDMYVKCNGLE 430
           A + PN VT  ++L AC   G L+ GR     ++   GI   +     ++DM  +   LE
Sbjct: 471 ANVKPNGVTFTNLLCACSHTGLLQEGRDFFKKMEPVYGITPGVKHYACMVDMLGRAGHLE 530

Query: 431 GAKMLFDRMVDRDSISWTTMLVGYAK-SGEFDAAQRLFDEMPSRDIASWN 577
            A  L   M      S    L+G  K  G  + A++    +   ++  WN
Sbjct: 531 EAINLIKTMPMPPLASVYGALLGACKLHGNVEVAEQASARL--LELEPWN 578


>gb|PON49396.1| DYW domain containing protein [Trema orientalis]
          Length = 739

 Score =  271 bits (693), Expect = 7e-83
 Identities = 142/240 (59%), Positives = 181/240 (75%), Gaps = 1/240 (0%)
 Frame = +2

Query: 5   SRLAAALHAMALKSPPHSHDIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSI 184
           S +    H M +KS   S D+FILNSLIH Y SCG L+L++++F  IP   +DVVSWNS+
Sbjct: 148 SLVGRGFHGMVIKSSLGS-DVFILNSLIHFYGSCGDLDLAYRVFLNIP--KKDVVSWNSM 204

Query: 185 IAAFAQAGRWDGALDLFRQMEDAGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDG 364
           I AF Q    + A DLFR ME   + PNDVTMV VLSACG K D+EFGR + S I+RN G
Sbjct: 205 ITAFVQGNCAEEAFDLFRAMEVENMKPNDVTMVGVLSACGKKVDIEFGRWLCSYIERN-G 263

Query: 365 IAECLILNNAILDMYVKCNGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFD 544
           IA  L LNNA+LDMYVKC  +E AK+LFD+M ++D +SWTTML GYA+ G+++ AQR+FD
Sbjct: 264 IAVNLTLNNAMLDMYVKCGSVEDAKLLFDKMPEKDVVSWTTMLDGYARLGKYEEAQRVFD 323

Query: 545 EMPSRDIASWNALISGYEQNGRPKDALALFNELQ-HADVEPDQVTLVAALSACSQLGAIE 721
            MP++DIA+WNALIS YEQNG+PK+ALA+F++LQ     +PD+VTLV+ LSACSQLGA +
Sbjct: 324 AMPNQDIAAWNALISSYEQNGKPKEALAVFHKLQISKSAKPDEVTLVSTLSACSQLGAFD 383



 Score =  104 bits (259), Expect = 8e-22
 Identities = 63/221 (28%), Positives = 110/221 (49%), Gaps = 1/221 (0%)
 Frame = +2

Query: 62  DIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQAGRWDGALDLFRQ 241
           D+    +++  YA  G    + ++FD +P  ++D+ +WN++I+++ Q G+   AL +F +
Sbjct: 298 DVVSWTTMLDGYARLGKYEEAQRVFDAMP--NQDIAAWNALISSYEQNGKPKEALAVFHK 355

Query: 242 ME-DAGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLILNNAILDMYVKC 418
           ++      P++VT+VS LSAC   G  + GR IH  I R      C  L  +++DMY KC
Sbjct: 356 LQISKSAKPDEVTLVSTLSACSQLGAFDPGRWIHVYIKRQGFKLNCH-LTTSLIDMYAKC 414

Query: 419 NGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFDEMPSRDIASWNALISGYE 598
                                          G  + A  +F+ +  +D+  W+A+I+G  
Sbjct: 415 -------------------------------GNLEKALEVFNSVERKDVYVWSAMIAGLA 443

Query: 599 QNGRPKDALALFNELQHADVEPDQVTLVAALSACSQLGAIE 721
            +GR + A+  F+++Q A V+P+ VT    L ACS  G +E
Sbjct: 444 MHGRGRAAIDFFSKMQKAKVKPNAVTFTNILCACSHSGLVE 484



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 46/173 (26%), Positives = 85/173 (49%), Gaps = 1/173 (0%)
 Frame = +2

Query: 71  ILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQAGRWDGALDLFRQMED 250
           +  SLI  YA CG+L  + ++F+ +    +DV  W+++IA  A  GR   A+D F +M+ 
Sbjct: 403 LTTSLIDMYAKCGNLEKALEVFNSV--ERKDVYVWSAMIAGLAMHGRGRAAIDFFSKMQK 460

Query: 251 AGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLILNNAILDMYVKCNGLE 430
           A + PN VT  ++L AC   G +E GR +   +++  G+   +   + ++DM  +   L+
Sbjct: 461 AKVKPNAVTFTNILCACSHSGLVEEGRNLFYQMEQVYGVVPGVKHYSCMVDMLGRSGRLK 520

Query: 431 GAKMLFDRMVDRDSIS-WTTMLVGYAKSGEFDAAQRLFDEMPSRDIASWNALI 586
            A    ++M    + S W  +L      G  + A+    ++   D  +  A +
Sbjct: 521 EAMEFIEKMPIAPTASVWGALLGACRLHGNVELAEHACSQLLELDPRNHGAYV 573


>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 743

 Score =  270 bits (690), Expect = 2e-82
 Identities = 140/235 (59%), Positives = 175/235 (74%), Gaps = 1/235 (0%)
 Frame = +2

Query: 20  ALHAMALKSPPHSHDIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFA 199
           A H M +K    S D+FILNSLIH YA CG L L +++F  IP   RDVVSWNS+I AF 
Sbjct: 157 AFHGMVIKVLLGS-DVFILNSLIHFYAKCGELGLGYRVFVNIP--RRDVVSWNSMITAFV 213

Query: 200 QAGRWDGALDLFRQMEDAGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECL 379
           Q G  + AL+LF++ME   + PN +TMV VLSAC  K D EFGR +HS I+RN  I E L
Sbjct: 214 QGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNR-IGESL 272

Query: 380 ILNNAILDMYVKCNGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFDEMPSR 559
            L+NA+LDMY KC  +E AK LFD+M ++D +SWTTMLVGYAK GE+DAAQ +FD MP++
Sbjct: 273 TLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQ 332

Query: 560 DIASWNALISGYEQNGRPKDALALFNELQ-HADVEPDQVTLVAALSACSQLGAIE 721
           DIA+WNALIS YEQ G+PK+AL LF+ELQ     +PD+VTLV+ LSAC+QLGA++
Sbjct: 333 DIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMD 387



 Score =  111 bits (278), Expect = 2e-24
 Identities = 66/221 (29%), Positives = 113/221 (51%), Gaps = 1/221 (0%)
 Frame = +2

Query: 62  DIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQAGRWDGALDLFRQ 241
           DI    +++  YA  G  + +  +FD +P  ++D+ +WN++I+A+ Q G+   AL+LF +
Sbjct: 302 DIVSWTTMLVGYAKIGEYDAAQGIFDAMP--NQDIAAWNALISAYEQCGKPKEALELFHE 359

Query: 242 MEDAGIG-PNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLILNNAILDMYVKC 418
           ++ +    P++VT+VS LSAC   G ++ G  IH  I +      C  L  +++DMY KC
Sbjct: 360 LQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCH-LTTSLIDMYCKC 418

Query: 419 NGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFDEMPSRDIASWNALISGYE 598
                                          G+   A  +F  +  +D+  W+A+I+G  
Sbjct: 419 -------------------------------GDLQKALMVFHSVERKDVFVWSAMIAGLA 447

Query: 599 QNGRPKDALALFNELQHADVEPDQVTLVAALSACSQLGAIE 721
            +G  KDA+ALF+++Q   V+P+ VT    L ACS +G +E
Sbjct: 448 MHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVE 488



 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 37/129 (28%), Positives = 64/129 (49%)
 Frame = +2

Query: 71  ILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQAGRWDGALDLFRQMED 250
           +  SLI  Y  CG L  +  +F  +    +DV  W+++IA  A  G    A+ LF +M++
Sbjct: 407 LTTSLIDMYCKCGDLQKALMVFHSV--ERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQE 464

Query: 251 AGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLILNNAILDMYVKCNGLE 430
             + PN VT  ++L AC   G +E GR   + ++   G+   +     ++D+  +   LE
Sbjct: 465 DKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLE 524

Query: 431 GAKMLFDRM 457
            A  L ++M
Sbjct: 525 EAVELIEKM 533


>gb|PON63025.1| DYW domain containing protein [Parasponia andersonii]
          Length = 739

 Score =  270 bits (689), Expect = 3e-82
 Identities = 141/240 (58%), Positives = 179/240 (74%), Gaps = 1/240 (0%)
 Frame = +2

Query: 5   SRLAAALHAMALKSPPHSHDIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSI 184
           S +    H M +KS   S D+FILNSLIH Y SCG L+L++++F  IP   +DVVSWNS+
Sbjct: 148 SLVGRGFHGMVIKSSLGS-DVFILNSLIHFYGSCGDLDLAYRVFINIP--RKDVVSWNSM 204

Query: 185 IAAFAQAGRWDGALDLFRQMEDAGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDG 364
           I AF Q    + A DLFR ME   + PNDVTMV VLSACG K D+EFGR + S I+RN G
Sbjct: 205 ITAFVQGNCAEEAFDLFRAMEVENMKPNDVTMVGVLSACGKKVDIEFGRWLCSYIERN-G 263

Query: 365 IAECLILNNAILDMYVKCNGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFD 544
           IA  L LNNA+LDMYVKC  +E AK+LFD+M ++D +SWTTML GYA+ G+++ A R+FD
Sbjct: 264 IAVNLTLNNAMLDMYVKCGSVEDAKLLFDKMPEKDVVSWTTMLDGYARLGKYEEAHRVFD 323

Query: 545 EMPSRDIASWNALISGYEQNGRPKDALALFNELQ-HADVEPDQVTLVAALSACSQLGAIE 721
            MP++DIA+WNALIS YEQNG+PK+ALA+F++LQ     +PD+VTLV  LSACSQLGA +
Sbjct: 324 AMPNQDIAAWNALISSYEQNGKPKEALAVFHKLQISKSAKPDEVTLVGTLSACSQLGAFD 383



 Score =  103 bits (257), Expect = 1e-21
 Identities = 62/221 (28%), Positives = 109/221 (49%), Gaps = 1/221 (0%)
 Frame = +2

Query: 62  DIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQAGRWDGALDLFRQ 241
           D+    +++  YA  G    + ++FD +P  ++D+ +WN++I+++ Q G+   AL +F +
Sbjct: 298 DVVSWTTMLDGYARLGKYEEAHRVFDAMP--NQDIAAWNALISSYEQNGKPKEALAVFHK 355

Query: 242 ME-DAGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLILNNAILDMYVKC 418
           ++      P++VT+V  LSAC   G  + GR IH  I R      C  L  +++DMY KC
Sbjct: 356 LQISKSAKPDEVTLVGTLSACSQLGAFDPGRWIHVYIKRQGFKLNCH-LTTSLIDMYAKC 414

Query: 419 NGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFDEMPSRDIASWNALISGYE 598
                                          G  + A  +F+ +  +D+  W+A+I+G  
Sbjct: 415 -------------------------------GNLEKALEVFNSVERKDVYVWSAMIAGLA 443

Query: 599 QNGRPKDALALFNELQHADVEPDQVTLVAALSACSQLGAIE 721
            +GR + A+  F+++Q A V+P+ VT    L ACS  G +E
Sbjct: 444 MHGRGRAAIDFFSKMQKAKVKPNAVTFTNILCACSHSGLVE 484



 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 46/173 (26%), Positives = 86/173 (49%), Gaps = 1/173 (0%)
 Frame = +2

Query: 71  ILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQAGRWDGALDLFRQMED 250
           +  SLI  YA CG+L  + ++F+ +    +DV  W+++IA  A  GR   A+D F +M+ 
Sbjct: 403 LTTSLIDMYAKCGNLEKALEVFNSV--ERKDVYVWSAMIAGLAMHGRGRAAIDFFSKMQK 460

Query: 251 AGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLILNNAILDMYVKCNGLE 430
           A + PN VT  ++L AC   G +E GR +   +++  G+   +   + ++DM  +   L+
Sbjct: 461 AKVKPNAVTFTNILCACSHSGLVEEGRNLFYQMEQVYGVVPGVKHYSCMVDMLGRSGRLK 520

Query: 431 GAKMLFDRM-VDRDSISWTTMLVGYAKSGEFDAAQRLFDEMPSRDIASWNALI 586
            A    ++M + R +  W  +L      G  + A+    ++   D  +  A +
Sbjct: 521 EAMEFIEKMPIARTASVWGALLGACRLHGNVELAEHACSQLLELDPRNHGAYV 573


>gb|PHT80272.1| Pentatricopeptide repeat-containing protein, chloroplastic
           [Capsicum annuum]
          Length = 687

 Score =  268 bits (685), Expect = 4e-82
 Identities = 137/239 (57%), Positives = 175/239 (73%), Gaps = 1/239 (0%)
 Frame = +2

Query: 8   RLAAALHAMALKSPPHSHDIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSII 187
           R    LH M +K      D+F+ NSLIH YA CG L+ ++  F+ +    RDVVSWN++I
Sbjct: 96  RFGRGLHGMVVKGKRVGFDVFVCNSLIHFYADCGCLDSAYLFFESMQT--RDVVSWNTMI 153

Query: 188 AAFAQAGRWDGALDLFRQMEDAGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGI 367
             F + G  D AL +F +M +  + PNDVTM++V SACG K DLEFGR +H+ I+RN GI
Sbjct: 154 LGFVEGGCVDEALKMFDRMGEENVRPNDVTMMAVSSACGKKMDLEFGRWVHTFIERN-GI 212

Query: 368 AECLILNNAILDMYVKCNGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFDE 547
            E LIL+NAILDMYVKC   E A+ LFD+M D+D  SWTTMLVGYA++G F AA+ + + 
Sbjct: 213 KESLILDNAILDMYVKCGSTEDAERLFDKMGDKDVFSWTTMLVGYARAGNFVAARSVLNT 272

Query: 548 MPSRDIASWNALISGYEQNGRPKDALALFNELQ-HADVEPDQVTLVAALSACSQLGAIE 721
           MPS+DIA+WNALIS YEQ+G+PK+ALA+FNELQ H   EPD+VTLV ALSAC+QLGAI+
Sbjct: 273 MPSQDIAAWNALISAYEQSGKPKEALAVFNELQLHKKAEPDEVTLVCALSACAQLGAID 331



 Score =  107 bits (267), Expect = 7e-23
 Identities = 64/221 (28%), Positives = 115/221 (52%), Gaps = 1/221 (0%)
 Frame = +2

Query: 62  DIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQAGRWDGALDLFRQ 241
           D+F   +++  YA  G+   +  + + +P   +D+ +WN++I+A+ Q+G+   AL +F +
Sbjct: 246 DVFSWTTMLVGYARAGNFVAARSVLNTMPS--QDIAAWNALISAYEQSGKPKEALAVFNE 303

Query: 242 ME-DAGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLILNNAILDMYVKC 418
           ++      P++VT+V  LSAC   G ++ GR IH  + +  GI     L  A++DMY KC
Sbjct: 304 LQLHKKAEPDEVTLVCALSACAQLGAIDLGRWIHVYMKKL-GIKLNCHLTTALIDMYSKC 362

Query: 419 NGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFDEMPSRDIASWNALISGYE 598
                                          G+ + A  +FD +  RD+  W+A+++G  
Sbjct: 363 -------------------------------GDVEKALAIFDSVNIRDVFVWSAMVAGLA 391

Query: 599 QNGRPKDALALFNELQHADVEPDQVTLVAALSACSQLGAIE 721
            +GR ++A++LF ++Q   V+P+ VTL+  L ACS  G +E
Sbjct: 392 MHGRGEEAISLFLKMQEHKVKPNSVTLINVLCACSHSGLVE 432



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 3/218 (1%)
 Frame = +2

Query: 62  DIFILNSLIHSYASC--GHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQAGRWDGALDLF 235
           D F  + LI + A      LN + Q+FD+IP    ++ SWN++I A++ +     ++ +F
Sbjct: 9   DPFSASKLIEASALSHFSSLNYAHQVFDQIP--QPNLFSWNAVIRAYSSSPDPMQSILMF 66

Query: 236 RQMEDAGIG-PNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLILNNAILDMYV 412
             M   G   P+  T   V  A        FGR +H  + +   +   + + N+++  Y 
Sbjct: 67  VNMICDGCEFPSKFTYPFVFKASAKMKAFRFGRGLHGMVVKGKRVGFDVFVCNSLIHFYA 126

Query: 413 KCNGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFDEMPSRDIASWNALISG 592
            C  L+ A + F+ M  RD +SW TM++G+ + G  D A ++FD M              
Sbjct: 127 DCGCLDSAYLFFESMQTRDVVSWNTMILGFVEGGCVDEALKMFDRMG------------- 173

Query: 593 YEQNGRPKDALALFNELQHADVEPDQVTLVAALSACSQ 706
            E+N RP D                 VT++A  SAC +
Sbjct: 174 -EENVRPND-----------------VTMMAVSSACGK 193



 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 50/184 (27%), Positives = 94/184 (51%), Gaps = 4/184 (2%)
 Frame = +2

Query: 71  ILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQAGRWDGALDLFRQMED 250
           +  +LI  Y+ CG +  +  +FD +  + RDV  W++++A  A  GR + A+ LF +M++
Sbjct: 351 LTTALIDMYSKCGDVEKALAIFDSV--NIRDVFVWSAMVAGLAMHGRGEEAISLFLKMQE 408

Query: 251 AGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLILNNAILDMYVKCNGLE 430
             + PN VT+++VL AC   G +E GR I + +    GI   +     ++D+  +   LE
Sbjct: 409 HKVKPNSVTLINVLCACSHSGLVEEGRAIFNQMVNAYGIVPGVKHYACLVDILGRAGELE 468

Query: 431 GAKMLFDRM-VDRDSISWTTMLVGYAKSGEFDAAQRLFD---EMPSRDIASWNALISGYE 598
            A+ L + M V   S  W  +L      G  + A++  +   E+   +  ++  L + Y 
Sbjct: 469 EAEELINNMPVTPGSTVWGALLGACRLHGNLELAEQACNRLLELEPENHGAYVTLSNIYA 528

Query: 599 QNGR 610
           ++G+
Sbjct: 529 KSGK 532


>gb|PHT46891.1| Pentatricopeptide repeat-containing protein, chloroplastic
           [Capsicum baccatum]
          Length = 744

 Score =  266 bits (681), Expect = 4e-81
 Identities = 136/239 (56%), Positives = 175/239 (73%), Gaps = 1/239 (0%)
 Frame = +2

Query: 8   RLAAALHAMALKSPPHSHDIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSII 187
           R    LH M +K      D+F+ NSLIH YA CG L+ ++  F+ +    RDVVSWN++I
Sbjct: 153 RFGRGLHGMVVKGKRVGFDVFVCNSLIHFYADCGCLDSAYLFFESMQT--RDVVSWNTMI 210

Query: 188 AAFAQAGRWDGALDLFRQMEDAGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGI 367
             F + G  D AL +F +M +  + PNDVTM++V SACG K DLEFGR +H+ I+RN GI
Sbjct: 211 LGFVEGGCVDEALKMFDRMGEENVRPNDVTMMAVSSACGKKMDLEFGRWVHAFIERN-GI 269

Query: 368 AECLILNNAILDMYVKCNGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFDE 547
            E LIL+NAILDMYVKC   E A+ LFD+M ++D  SWTTMLVGYA++G F AA+ + + 
Sbjct: 270 KESLILDNAILDMYVKCGSTEDAERLFDKMGEKDVFSWTTMLVGYARAGNFVAARSVLNT 329

Query: 548 MPSRDIASWNALISGYEQNGRPKDALALFNELQ-HADVEPDQVTLVAALSACSQLGAIE 721
           MPS+DIA+WNALIS YEQ+G+PK+ALA+FNELQ H   EPD+VTLV ALSAC+QLGAI+
Sbjct: 330 MPSQDIAAWNALISAYEQSGKPKEALAVFNELQLHKKAEPDEVTLVCALSACAQLGAID 388



 Score =  107 bits (266), Expect = 9e-23
 Identities = 64/221 (28%), Positives = 115/221 (52%), Gaps = 1/221 (0%)
 Frame = +2

Query: 62  DIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQAGRWDGALDLFRQ 241
           D+F   +++  YA  G+   +  + + +P   +D+ +WN++I+A+ Q+G+   AL +F +
Sbjct: 303 DVFSWTTMLVGYARAGNFVAARSVLNTMPS--QDIAAWNALISAYEQSGKPKEALAVFNE 360

Query: 242 ME-DAGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLILNNAILDMYVKC 418
           ++      P++VT+V  LSAC   G ++ GR IH  + +  GI     L  A++DMY KC
Sbjct: 361 LQLHKKAEPDEVTLVCALSACAQLGAIDLGRWIHVYMKKL-GIKLNCHLTTALIDMYSKC 419

Query: 419 NGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFDEMPSRDIASWNALISGYE 598
                                          G+ + A  +FD +  RD+  W+A+++G  
Sbjct: 420 -------------------------------GDVEKALAIFDSVYIRDVFVWSAMVAGLA 448

Query: 599 QNGRPKDALALFNELQHADVEPDQVTLVAALSACSQLGAIE 721
            +GR ++A++LF ++Q   V+P+ VTL+  L ACS  G +E
Sbjct: 449 MHGRGEEAISLFLKMQEHKVKPNSVTLINVLCACSHSGLVE 489



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 62/233 (26%), Positives = 104/233 (44%), Gaps = 5/233 (2%)
 Frame = +2

Query: 23  LHAMALKS----PPHSHDIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIA 190
           +HA  L+      P S    I  S +  ++S   LN + Q+FD+IP    ++ SWN++I 
Sbjct: 54  IHAQMLRIGLFFDPFSASKLIEASALSHFSS---LNYAHQVFDQIP--QPNLFSWNALIR 108

Query: 191 AFAQAGRWDGALDLFRQMEDAGIG-PNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGI 367
           A++ +     ++ +F  M   G   P+  T   V  A        FGR +H  + +   +
Sbjct: 109 AYSSSPDPMQSILMFVNMICDGCEFPSKFTYPFVFKASAKMKAFRFGRGLHGMVVKGKRV 168

Query: 368 AECLILNNAILDMYVKCNGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFDE 547
              + + N+++  Y  C  L+ A + F+ M  RD +SW TM++G+ + G  D A ++FD 
Sbjct: 169 GFDVFVCNSLIHFYADCGCLDSAYLFFESMQTRDVVSWNTMILGFVEGGCVDEALKMFDR 228

Query: 548 MPSRDIASWNALISGYEQNGRPKDALALFNELQHADVEPDQVTLVAALSACSQ 706
           M               E+N RP D                 VT++A  SAC +
Sbjct: 229 MG--------------EENVRPND-----------------VTMMAVSSACGK 250



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 50/184 (27%), Positives = 93/184 (50%), Gaps = 4/184 (2%)
 Frame = +2

Query: 71  ILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQAGRWDGALDLFRQMED 250
           +  +LI  Y+ CG +  +  +FD +    RDV  W++++A  A  GR + A+ LF +M++
Sbjct: 408 LTTALIDMYSKCGDVEKALAIFDSVYI--RDVFVWSAMVAGLAMHGRGEEAISLFLKMQE 465

Query: 251 AGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLILNNAILDMYVKCNGLE 430
             + PN VT+++VL AC   G +E GR I + +    GI   +     ++D+  +   LE
Sbjct: 466 HKVKPNSVTLINVLCACSHSGLVEEGRAIFNQMVNAYGIIPGVKHYACLVDILGRAGELE 525

Query: 431 GAKMLFDRM-VDRDSISWTTMLVGYAKSGEFDAAQRLFD---EMPSRDIASWNALISGYE 598
            A+ L + M V   S  W  +L      G  + A++  +   E+   +  ++  L + Y 
Sbjct: 526 EAEELINNMPVTPGSTVWGALLGACRLHGNLELAEQACNRLLELEPENHGAYVTLSNIYA 585

Query: 599 QNGR 610
           ++G+
Sbjct: 586 KSGK 589


>ref|XP_016577697.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Capsicum annuum]
          Length = 744

 Score =  266 bits (681), Expect = 4e-81
 Identities = 136/239 (56%), Positives = 175/239 (73%), Gaps = 1/239 (0%)
 Frame = +2

Query: 8   RLAAALHAMALKSPPHSHDIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSII 187
           R    LH M +K      D+F+ NSLIH YA CG L+ ++  F+ +    RDVVSWN++I
Sbjct: 153 RFGRGLHGMVVKGKRVGFDVFVCNSLIHFYADCGCLDSAYLFFESMQT--RDVVSWNTMI 210

Query: 188 AAFAQAGRWDGALDLFRQMEDAGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGI 367
             F + G  D AL +F +M +  + PNDVTM++V SACG K DLEFGR +H+ I+RN GI
Sbjct: 211 LGFVEGGCVDEALKMFDRMGEENVRPNDVTMMAVSSACGKKMDLEFGRWVHTFIERN-GI 269

Query: 368 AECLILNNAILDMYVKCNGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFDE 547
            E LIL+NAILDMYVKC   E A+ LFD+M ++D  SWTTMLVGYA++G F AA+ + + 
Sbjct: 270 KESLILDNAILDMYVKCGSTEDAERLFDKMENKDVFSWTTMLVGYARAGNFVAARSVLNT 329

Query: 548 MPSRDIASWNALISGYEQNGRPKDALALFNELQ-HADVEPDQVTLVAALSACSQLGAIE 721
           MPS+DIA+WNALIS YEQ+G+PK+ALA+FNELQ H   EPD+VTLV ALSAC+QLGAI+
Sbjct: 330 MPSQDIAAWNALISAYEQSGKPKEALAVFNELQLHKKAEPDEVTLVCALSACAQLGAID 388



 Score =  107 bits (267), Expect = 7e-23
 Identities = 64/221 (28%), Positives = 115/221 (52%), Gaps = 1/221 (0%)
 Frame = +2

Query: 62  DIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQAGRWDGALDLFRQ 241
           D+F   +++  YA  G+   +  + + +P   +D+ +WN++I+A+ Q+G+   AL +F +
Sbjct: 303 DVFSWTTMLVGYARAGNFVAARSVLNTMPS--QDIAAWNALISAYEQSGKPKEALAVFNE 360

Query: 242 ME-DAGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLILNNAILDMYVKC 418
           ++      P++VT+V  LSAC   G ++ GR IH  + +  GI     L  A++DMY KC
Sbjct: 361 LQLHKKAEPDEVTLVCALSACAQLGAIDLGRWIHVYMKKL-GIKLNCHLTTALIDMYSKC 419

Query: 419 NGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFDEMPSRDIASWNALISGYE 598
                                          G+ + A  +FD +  RD+  W+A+++G  
Sbjct: 420 -------------------------------GDVEKALAIFDSVNIRDVFVWSAMVAGLA 448

Query: 599 QNGRPKDALALFNELQHADVEPDQVTLVAALSACSQLGAIE 721
            +GR ++A++LF ++Q   V+P+ VTL+  L ACS  G +E
Sbjct: 449 MHGRGEEAISLFLKMQEHKVKPNSVTLINVLCACSHSGLVE 489



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 62/233 (26%), Positives = 104/233 (44%), Gaps = 5/233 (2%)
 Frame = +2

Query: 23  LHAMALKS----PPHSHDIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIA 190
           +HA  L+      P S    I  S +  ++S   LN + Q+FD+IP    ++ SWN++I 
Sbjct: 54  IHAQMLRIGLFFDPFSASKLIEASTLSHFSS---LNYAHQVFDQIP--QPNLFSWNAVIR 108

Query: 191 AFAQAGRWDGALDLFRQMEDAGIG-PNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGI 367
           A++ +     ++ +F  M   G   P+  T   V  A        FGR +H  + +   +
Sbjct: 109 AYSSSPDPMQSILMFVNMICDGCEFPSKFTYPFVFKASAKMKAFRFGRGLHGMVVKGKRV 168

Query: 368 AECLILNNAILDMYVKCNGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFDE 547
              + + N+++  Y  C  L+ A + F+ M  RD +SW TM++G+ + G  D A ++FD 
Sbjct: 169 GFDVFVCNSLIHFYADCGCLDSAYLFFESMQTRDVVSWNTMILGFVEGGCVDEALKMFDR 228

Query: 548 MPSRDIASWNALISGYEQNGRPKDALALFNELQHADVEPDQVTLVAALSACSQ 706
           M               E+N RP D                 VT++A  SAC +
Sbjct: 229 MG--------------EENVRPND-----------------VTMMAVSSACGK 250



 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 50/184 (27%), Positives = 94/184 (51%), Gaps = 4/184 (2%)
 Frame = +2

Query: 71  ILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQAGRWDGALDLFRQMED 250
           +  +LI  Y+ CG +  +  +FD +  + RDV  W++++A  A  GR + A+ LF +M++
Sbjct: 408 LTTALIDMYSKCGDVEKALAIFDSV--NIRDVFVWSAMVAGLAMHGRGEEAISLFLKMQE 465

Query: 251 AGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLILNNAILDMYVKCNGLE 430
             + PN VT+++VL AC   G +E GR I + +    GI   +     ++D+  +   LE
Sbjct: 466 HKVKPNSVTLINVLCACSHSGLVEEGRAIFNQMVNAYGIVPGVKHYACLVDILGRAGELE 525

Query: 431 GAKMLFDRM-VDRDSISWTTMLVGYAKSGEFDAAQRLFD---EMPSRDIASWNALISGYE 598
            A+ L + M V   S  W  +L      G  + A++  +   E+   +  ++  L + Y 
Sbjct: 526 EAEELINNMPVTPGSTVWGALLGACRLHGNLELAEQACNRLLELEPENHGAYVTLSNIYA 585

Query: 599 QNGR 610
           ++G+
Sbjct: 586 KSGK 589


>ref|XP_008365629.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g29760, chloroplastic-like [Malus domestica]
          Length = 773

 Score =  266 bits (679), Expect = 1e-80
 Identities = 142/235 (60%), Positives = 175/235 (74%), Gaps = 1/235 (0%)
 Frame = +2

Query: 20  ALHAMALKSPPHSHDIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFA 199
           A+H MA+KS   S DI+ILNSL+H Y +CG L L+ ++F K P   +DVVSWNSII  FA
Sbjct: 187 AVHGMAIKSSLGS-DIYILNSLVHFYGTCGDLGLARRVFVKTP--KKDVVSWNSIITVFA 243

Query: 200 QAGRWDGALDLFRQMEDAGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECL 379
           Q    +  L+LF++ME   + PNDVTMV VLSACG K DLEFGR +   I RN GI E L
Sbjct: 244 QGNCPEEVLELFKEMEAENVEPNDVTMVGVLSACGQKVDLEFGRWVCLYIARN-GITENL 302

Query: 380 ILNNAILDMYVKCNGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFDEMPSR 559
            LNNA+LDMYVKC  +E AK LFDRM ++D +SWTTML GYA+S  +D   R+FD MPS+
Sbjct: 303 TLNNAVLDMYVKCGSVEEAKXLFDRMPEKDIVSWTTMLDGYAQSRNYDKXWRIFDAMPSQ 362

Query: 560 DIASWNALISGYEQNGRPKDALALFNELQHA-DVEPDQVTLVAALSACSQLGAIE 721
           DIA+WN LIS YEQ+G+PK+ALA+FNELQ +   +PD VTLV+ L+ACSQLGAIE
Sbjct: 363 DIAAWNVLISSYEQSGKPKEALAVFNELQKSKSPKPDGVTLVSTLAACSQLGAIE 417



 Score =  110 bits (274), Expect = 8e-24
 Identities = 64/221 (28%), Positives = 114/221 (51%), Gaps = 1/221 (0%)
 Frame = +2

Query: 62  DIFILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQAGRWDGALDLFRQ 241
           DI    +++  YA   + +  +++FD +P   +D+ +WN +I+++ Q+G+   AL +F +
Sbjct: 332 DIVSWTTMLDGYAQSRNYDKXWRIFDAMPS--QDIAAWNVLISSYEQSGKPKEALAVFNE 389

Query: 242 MEDA-GIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLILNNAILDMYVKC 418
           ++ +    P+ VT+VS L+AC   G +E G +IH  + +  GI     L  +++DMY KC
Sbjct: 390 LQKSKSPKPDGVTLVSTLAACSQLGAIELGGQIHVYM-KKQGIKMNXHLTTSLIDMYAKC 448

Query: 419 NGLEGAKMLFDRMVDRDSISWTTMLVGYAKSGEFDAAQRLFDEMPSRDIASWNALISGYE 598
                                          G+ D A  +F+ +  RD+  W+A+ISG+ 
Sbjct: 449 -------------------------------GDLDKALEVFNSVERRDVFVWSAMISGFA 477

Query: 599 QNGRPKDALALFNELQHADVEPDQVTLVAALSACSQLGAIE 721
            +GR +DAL +F+++  A V P+ VT    L ACS  G ++
Sbjct: 478 MHGRGRDALDIFSKMLEAKVNPNAVTFTNLLCACSHAGLVD 518



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 1/165 (0%)
 Frame = +2

Query: 71  ILNSLIHSYASCGHLNLSFQLFDKIPCSHRDVVSWNSIIAAFAQAGRWDGALDLFRQMED 250
           +  SLI  YA CG L+ + ++F+ +    RDV  W+++I+ FA  GR   ALD+F +M +
Sbjct: 437 LTTSLIDMYAKCGDLDKALEVFNSV--ERRDVFVWSAMISGFAMHGRGRDALDIFSKMLE 494

Query: 251 AGIGPNDVTMVSVLSACGMKGDLEFGRRIHSCIDRNDGIAECLILNNAILDMYVKCNGLE 430
           A + PN VT  ++L AC   G ++ G+     ++    +   +     ++D+  +   LE
Sbjct: 495 AKVNPNAVTFTNLLCACSHAGLVDEGKMFFYQMEPVYSVVPGVKHYACMVDIJGRSGNLE 554

Query: 431 GAKMLFDRM-VDRDSISWTTMLVGYAKSGEFDAAQRLFDEMPSRD 562
            A  L ++M +   +  W  +L      G F+ A++    M   D
Sbjct: 555 EAVELIEKMKIPPTASVWGALLXACGLHGSFELAEKACSHMLELD 599