BLASTX nr result

ID: Ophiopogon25_contig00018131 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00018131
         (1705 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020250513.1| LOW QUALITY PROTEIN: RNA polymerase sigma fa...   588   0.0  
gb|ONK55039.1| uncharacterized protein A4U43_UnF8330 [Asparagus ...   539   0.0  
ref|XP_010913927.1| PREDICTED: RNA polymerase sigma factor sigE,...   538   0.0  
ref|XP_010266467.1| PREDICTED: RNA polymerase sigma factor sigE,...   533   0.0  
ref|XP_008810822.1| PREDICTED: RNA polymerase sigma factor sigE,...   532   0.0  
gb|OVA11451.1| RNA polymerase sigma-70 [Macleaya cordata]             513   e-175
ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,...   513   e-174
ref|XP_024176960.1| RNA polymerase sigma factor sigE, chloroplas...   509   e-173
ref|XP_015878246.1| PREDICTED: RNA polymerase sigma factor sigE,...   507   e-172
ref|XP_009410848.1| PREDICTED: RNA polymerase sigma factor sigE,...   505   e-171
gb|PON96872.1| RNA polymerase sigma factor [Trema orientalis]         506   e-171
gb|PON50098.1| RNA polymerase sigma factor [Parasponia andersonii]    505   e-171
gb|OWM79621.1| hypothetical protein CDL15_Pgr023033 [Punica gran...   500   e-169
ref|XP_007219010.1| RNA polymerase sigma factor sigE, chloroplas...   499   e-169
ref|XP_022922776.1| RNA polymerase sigma factor sigE, chloroplas...   497   e-168
ref|XP_022922775.1| RNA polymerase sigma factor sigE, chloroplas...   497   e-168
ref|XP_020105381.1| RNA polymerase sigma factor sigE, chloroplas...   497   e-168
ref|XP_022984454.1| RNA polymerase sigma factor sigE, chloroplas...   495   e-168
ref|XP_022984453.1| RNA polymerase sigma factor sigE, chloroplas...   495   e-167
ref|XP_022738891.1| RNA polymerase sigma factor sigE, chloroplas...   495   e-167

>ref|XP_020250513.1| LOW QUALITY PROTEIN: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Asparagus officinalis]
          Length = 478

 Score =  588 bits (1516), Expect = 0.0
 Identities = 324/447 (72%), Positives = 355/447 (79%), Gaps = 9/447 (2%)
 Frame = +1

Query: 121  IPLEQL--KQRRRPKKTNPTKAQTIKQQPNNELDYNEVAAALENIYKLSPAADVADAE-- 288
            IPL+Q   +QR+RP K+ P K++    +P+ +LDYNEVAAALEN+YKLSP ADVA+ +  
Sbjct: 54   IPLDQQPKRQRKRPSKSKPNKSK----KPDADLDYNEVAAALENLYKLSPPADVAEEKKV 109

Query: 289  ----VFDRKRR-KDLGGGENIDNIXXXXXXXXXXXXXXXXXXXEGKKRGREGEIRCGFSE 453
                V +RKRR K LG  + ++ +                     +KR REGEI  G S+
Sbjct: 110  EIDVVRNRKRRPKRLGLEKRVEAM---------------------RKRSREGEIGGGSSK 148

Query: 454  KDGXXXXXXXXXXXXYSVSTTDVVSLDWRKMKIPPVLSSSEQARLFKLMQPMKAIFEVKE 633
            K+             YSVST D+ SLDWR++KIPPVL S+E  RLFKLMQPMKAI EVKE
Sbjct: 149  KE--EEEEIDRLVREYSVST-DLGSLDWRRVKIPPVLGSAEHTRLFKLMQPMKAISEVKE 205

Query: 634  NLHSDLNKEPAEGELAAAVNMTVPQLRRHIEVGHAARNKLIKHNLRLVLFVINKYYQEIA 813
            NLH DLNKEP EGELAAAVNMTV +LR+HIEVG AARNKLIKHNLRLVLFVINKYYQEIA
Sbjct: 206  NLHKDLNKEPTEGELAAAVNMTVSELRKHIEVGQAARNKLIKHNLRLVLFVINKYYQEIA 265

Query: 814  SGDKFQDLCQAGVKGLITAIDRFEPKRGFRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIE 993
            SGDKFQDLCQAGVKGLITAIDRFEPKRGFRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIE
Sbjct: 266  SGDKFQDLCQAGVKGLITAIDRFEPKRGFRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIE 325

Query: 994  SVRQEIQKAKLELMCELQRLPTEEEIISRVGISPERYRDVMKASKLVYSLNSRHVVTQEE 1173
            SVRQEIQKAKLEL+ EL RLPTEEEII+RVGISPERY DVM+ASK V+SLNSRHVVTQEE
Sbjct: 326  SVRQEIQKAKLELIIELNRLPTEEEIIARVGISPERYHDVMRASKSVFSLNSRHVVTQEE 385

Query: 1174 FINAITDIDGVGGDKRRQPAXXXXXXXXXXXXXNPKESLVIRQRYGLDGKGDRTLGEIAG 1353
            FINAITD+DGVGGDKRRQPA              PKESLVIRQRYGLDGKGDRTLGEIAG
Sbjct: 386  FINAITDVDGVGGDKRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAG 445

Query: 1354 NLNISREMVRKHELKALMKLKHPARLD 1434
            NLNISREMVRKHELKALMKLKHPARLD
Sbjct: 446  NLNISREMVRKHELKALMKLKHPARLD 472


>gb|ONK55039.1| uncharacterized protein A4U43_UnF8330 [Asparagus officinalis]
          Length = 346

 Score =  539 bits (1389), Expect = 0.0
 Identities = 283/342 (82%), Positives = 297/342 (86%)
 Frame = +1

Query: 409  KKRGREGEIRCGFSEKDGXXXXXXXXXXXXYSVSTTDVVSLDWRKMKIPPVLSSSEQARL 588
            +KR REGEI  G S+K+             YSVST D+ SLDWR++KIPPVL S+E  RL
Sbjct: 2    RKRSREGEIGGGSSKKE--EEEEIDRLVREYSVST-DLGSLDWRRVKIPPVLGSAEHTRL 58

Query: 589  FKLMQPMKAIFEVKENLHSDLNKEPAEGELAAAVNMTVPQLRRHIEVGHAARNKLIKHNL 768
            FKLMQPMKAI EVKENLH DLNKEP EGELAAAVNMTV +LR+HIEVG AARNKLIKHNL
Sbjct: 59   FKLMQPMKAISEVKENLHKDLNKEPTEGELAAAVNMTVSELRKHIEVGQAARNKLIKHNL 118

Query: 769  RLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFEPKRGFRLSTYGLFWIRHSIIR 948
            RLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFEPKRGFRLSTYGLFWIRHSIIR
Sbjct: 119  RLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFEPKRGFRLSTYGLFWIRHSIIR 178

Query: 949  SMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTEEEIISRVGISPERYRDVMKASK 1128
            SMTTSSFTRVSFGIESVRQEIQKAKLEL+ EL RLPTEEEII+RVGISPERY DVM+ASK
Sbjct: 179  SMTTSSFTRVSFGIESVRQEIQKAKLELIIELNRLPTEEEIIARVGISPERYHDVMRASK 238

Query: 1129 LVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXXXXXXXNPKESLVIRQRY 1308
             V+SLNSRHVVTQEEFINAITD+DGVGGDKRRQPA              PKESLVIRQRY
Sbjct: 239  SVFSLNSRHVVTQEEFINAITDVDGVGGDKRRQPALLRLALDDVLDSLKPKESLVIRQRY 298

Query: 1309 GLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD 1434
            GLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD
Sbjct: 299  GLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD 340


>ref|XP_010913927.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Elaeis guineensis]
 ref|XP_010913942.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Elaeis guineensis]
          Length = 498

 Score =  538 bits (1386), Expect = 0.0
 Identities = 308/479 (64%), Positives = 343/479 (71%), Gaps = 8/479 (1%)
 Frame = +1

Query: 22   RPSPSGVRPASIVAFKTDRT-KCSAVAASQEPATIPLEQLKQRRRPKKTNPTKAQTIKQQ 198
            R SP+  RP   +AF+TDR  KCSA A S E    P    K  +R + T+   A T  Q 
Sbjct: 24   RRSPAFRRPFFCLAFRTDRAAKCSAAAVSSEAVKPPQ---KPPKRAQATSVDAAPTATQ- 79

Query: 199  PNNELDYNEVAAALENIYKLSPAADVADAEVFDRKRRKDLGG-------GENIDNIXXXX 357
               +LDYNEVAAALENIYKLSPA +V+D E  D++ R+  G        G+  +      
Sbjct: 80   ---DLDYNEVAAALENIYKLSPA-EVSDVEETDQRGRRRRGRSRKRAKEGDGEEGNVVRN 135

Query: 358  XXXXXXXXXXXXXXXEGKKRGREGEIRCGFSEKDGXXXXXXXXXXXXYSVSTTDVVSLDW 537
                             +++  E E+     E+              YSVST D+ SLDW
Sbjct: 136  RKRRVRRLSLEKRIALRRRKDEEVEMVAARDERRDLDEDVGKLLRE-YSVST-DLASLDW 193

Query: 538  RKMKIPPVLSSSEQARLFKLMQPMKAIFEVKENLHSDLNKEPAEGELAAAVNMTVPQLRR 717
            +KMKIPPVLSS+E   LF+LMQPMKAIFEVK NL+ DLN+EP + ELAAAVNMTVPQLRR
Sbjct: 194  KKMKIPPVLSSAEHNWLFELMQPMKAIFEVKHNLNKDLNREPTDAELAAAVNMTVPQLRR 253

Query: 718  HIEVGHAARNKLIKHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFEPKRG 897
            HIEVG AARNKLIKHNLRLVLFVINKYY EIASG KFQDLCQAGVKGLITAIDRFE KRG
Sbjct: 254  HIEVGRAARNKLIKHNLRLVLFVINKYYPEIASGQKFQDLCQAGVKGLITAIDRFEAKRG 313

Query: 898  FRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTEEEIIS 1077
            FRLSTYGLFWIRHSIIRSMT SSFTRV FGIESVRQEIQKAKLEL  EL R+P +EEII 
Sbjct: 314  FRLSTYGLFWIRHSIIRSMTISSFTRVPFGIESVRQEIQKAKLELQFELGRVPKDEEIID 373

Query: 1078 RVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXX 1257
            RV ISPERY DVMKA+K ++SL++RH VTQEEFIN ITDIDGVGGDKRRQ A        
Sbjct: 374  RVKISPERYYDVMKAAKPIFSLHARHAVTQEEFINGITDIDGVGGDKRRQRALLRLALDD 433

Query: 1258 XXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD 1434
                  PKESLVIRQRYGLDGKGDRTLGEIAGNL+ISREMVRKHELKA MKLKHPAR+D
Sbjct: 434  VLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLSISREMVRKHELKAFMKLKHPARVD 492


>ref|XP_010266467.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Nelumbo nucifera]
          Length = 514

 Score =  533 bits (1373), Expect = 0.0
 Identities = 292/479 (60%), Positives = 344/479 (71%), Gaps = 19/479 (3%)
 Frame = +1

Query: 55   IVAFKTDRTKCSAVAASQEPATIPLEQLK--QRRRPKKTNPTKAQTI-----KQQPNNEL 213
            I+AFKTD+ K  A+    EP  +P++  K  Q+R  + T P+K   +           E+
Sbjct: 33   ILAFKTDKAKDRALVTHHEPIPLPMDTPKENQKRLRRATKPSKRVKVVCSDEASSCTIEM 92

Query: 214  DYNEVAAALENIYKLSPAADVADAEVFDR------KRRKDLG------GGENIDNIXXXX 357
            DYN+VAA LE+IYKLSP  DV+D +  DR      + RK LG      G E+ DN+    
Sbjct: 93   DYNDVAAKLESIYKLSPPTDVSDVDDTDRVGRRRRRTRKKLGEADRKTGKESSDNVIRNH 152

Query: 358  XXXXXXXXXXXXXXXEGKKRGREGEIRCGFSEKDGXXXXXXXXXXXXYSVSTTDVVSLDW 537
                             +++  EG ++    ++              YSVST D+ SLDW
Sbjct: 153  NKNKRLSLDRRIAL---RRKKEEGAVQLSGVKEGSKEDGDVDKLVGEYSVST-DLASLDW 208

Query: 538  RKMKIPPVLSSSEQARLFKLMQPMKAIFEVKENLHSDLNKEPAEGELAAAVNMTVPQLRR 717
            +KMKIPPVL SSE A LFKLMQPM A+F++KENLH DL +EP +GELA + NM+V Q+RR
Sbjct: 209  KKMKIPPVLPSSEHAWLFKLMQPMNALFQMKENLHRDLGREPTDGELADSTNMSVFQVRR 268

Query: 718  HIEVGHAARNKLIKHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFEPKRG 897
             IEVG AARN+LIKHNLRLVLFVINKY+QE A+G KFQDLCQAGVKGLITAIDRFEPKR 
Sbjct: 269  CIEVGRAARNRLIKHNLRLVLFVINKYFQEFANGPKFQDLCQAGVKGLITAIDRFEPKRR 328

Query: 898  FRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTEEEIIS 1077
            FRLSTYGLFWIRH+I+RSMT SSFTRVSFG+ESVR EIQ+AKLELM EL+RLPTEEEII 
Sbjct: 329  FRLSTYGLFWIRHAIMRSMTLSSFTRVSFGLESVRVEIQRAKLELMFELERLPTEEEIIK 388

Query: 1078 RVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXX 1257
            +VGISPERY +V+KASK V+SL+SRH +TQEEFIN ITDI+GVGGDKRRQPA        
Sbjct: 389  KVGISPERYHEVIKASKPVFSLHSRHAITQEEFINGITDIEGVGGDKRRQPALLRLALDD 448

Query: 1258 XXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD 1434
                  PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE+KALMKLKHP R+D
Sbjct: 449  VLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVD 507


>ref|XP_008810822.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Phoenix dactylifera]
          Length = 498

 Score =  532 bits (1370), Expect = 0.0
 Identities = 302/485 (62%), Positives = 338/485 (69%), Gaps = 8/485 (1%)
 Frame = +1

Query: 4    RFVSRHRPSPSGVRPASIVAFKTDRT-KCSAVAASQEPATIPLEQLKQRRRPKKTNPTKA 180
            R  +R  P+P   RP   +AF+ D T KCSA A       IP E +K  ++  K     +
Sbjct: 20   RLSARRLPAPR--RPFLCLAFRADWTAKCSAAA-------IPSEAVKPPQKSSKRAQAAS 70

Query: 181  QTIKQQPNNELDYNEVAAALENIYKLSPAADVADAEVFDRKRRKDLGG-------GENID 339
                     +LDYNEVAAALENIYKLSPA +V+D E  DR+ R+  G        G+  +
Sbjct: 71   VDAPPTATQDLDYNEVAAALENIYKLSPA-EVSDVEEADRRGRRRRGRSRKRAKEGDGEE 129

Query: 340  NIXXXXXXXXXXXXXXXXXXXEGKKRGREGEIRCGFSEKDGXXXXXXXXXXXXYSVSTTD 519
                                   +++  E E      E+              YSVST D
Sbjct: 130  GNVVRNRKRRVRRLSLEKRIASRRRKDEEVEAAAARDERRDLDEDGEKLLRE-YSVST-D 187

Query: 520  VVSLDWRKMKIPPVLSSSEQARLFKLMQPMKAIFEVKENLHSDLNKEPAEGELAAAVNMT 699
            + SLDW+KMKIPPVLSS+E  RLF+LMQPMKAIFEVK+NL  DLN+EP + ELA AVNMT
Sbjct: 188  LASLDWKKMKIPPVLSSAEHNRLFELMQPMKAIFEVKKNLDKDLNREPTDAELAVAVNMT 247

Query: 700  VPQLRRHIEVGHAARNKLIKHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDR 879
            VP+LRRHIEVG AARN LIKHNLRLVLFVINKYY EIASG KFQDLCQAGVKGLITAIDR
Sbjct: 248  VPRLRRHIEVGQAARNMLIKHNLRLVLFVINKYYPEIASGQKFQDLCQAGVKGLITAIDR 307

Query: 880  FEPKRGFRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPT 1059
            FEPKRGFRLSTYGLFWIRHSI RSMT SSFTRV FGIESVRQEIQKAKLEL  EL RLP 
Sbjct: 308  FEPKRGFRLSTYGLFWIRHSITRSMTVSSFTRVPFGIESVRQEIQKAKLELQFELGRLPK 367

Query: 1060 EEEIISRVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXX 1239
            +EEII RV ISPERY DVMKA+K ++SL++RH VTQEEFI+ ITD+DGVGGDK RQ A  
Sbjct: 368  DEEIIDRVKISPERYHDVMKAAKPIFSLHARHAVTQEEFIDGITDMDGVGGDKHRQRALL 427

Query: 1240 XXXXXXXXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKH 1419
                        PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKA MKLKH
Sbjct: 428  RLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKAFMKLKH 487

Query: 1420 PARLD 1434
            PAR+D
Sbjct: 488  PARVD 492


>gb|OVA11451.1| RNA polymerase sigma-70 [Macleaya cordata]
          Length = 513

 Score =  513 bits (1322), Expect = e-175
 Identities = 290/493 (58%), Positives = 343/493 (69%), Gaps = 15/493 (3%)
 Frame = +1

Query: 1    VRFVSRHRPSPSGVRPASIVAFKTDRTKCSAVAASQE----PATIPLEQLKQRRRPKKTN 168
            VRF S   P    ++   ++AFK+D+TK +A+ A+QE    P   P EQ + RR  + + 
Sbjct: 19   VRFSSHRSP----LKRTLVLAFKSDKTKNTALVATQESIQLPRDAPNEQKRLRRATESSK 74

Query: 169  PTKAQTIKQQPNNELD--YNEVAAALENIYKLSPAADVADAE-----VFDRKRRKDLG-- 321
              KA +  +     LD  Y E AA LENIYKL+   D +D E     V  R+R K +   
Sbjct: 75   RVKAVSTDEPSPCALDLYYREAAAKLENIYKLNCPTDGSDVEDDYPVVRRRRRVKKVNKH 134

Query: 322  GGENIDNIXXXXXXXXXXXXXXXXXXXEGKKRGREGEIRCGFSEKDGXXXXXXXXXXXX- 498
            G +                           +R  + EI     ++DG             
Sbjct: 135  GEKATKEASWKVVRSQKKMKRLGLDERIAVRRKEKEEITLSQGKEDGKMKGGDDVERLVR 194

Query: 499  -YSVSTTDVVSLDWRKMKIPPVLSSSEQARLFKLMQPMKAIFEVKENLHSDLNKEPAEGE 675
             YSVST D+VSLDW+KMKIP VL SSE   LFKLMQPMK + +VKENLH D N+EP +GE
Sbjct: 195  EYSVST-DLVSLDWKKMKIPSVLPSSEHTWLFKLMQPMKVLLQVKENLHKDFNREPTDGE 253

Query: 676  LAAAVNMTVPQLRRHIEVGHAARNKLIKHNLRLVLFVINKYYQEIASGDKFQDLCQAGVK 855
            LAAA NM+V Q++RHIEVG AARNKLIKHNLRLVLFVINKY+Q+ A+G ++QDLCQAGVK
Sbjct: 254  LAAATNMSVIQVKRHIEVGQAARNKLIKHNLRLVLFVINKYFQDFANGPRYQDLCQAGVK 313

Query: 856  GLITAIDRFEPKRGFRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELM 1035
            GLITAIDRFEP+R  RLSTYGLFWIRH+IIRSMT SSFTRVSFG+ESVR EIQ+AKL+LM
Sbjct: 314  GLITAIDRFEPQRKLRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRVEIQRAKLDLM 373

Query: 1036 CELQRLPTEEEIISRVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGD 1215
             EL+R PTEEEII +VGISPERY +VM+ASK V+SL++RH+ TQEEFIN ITD+DGVGGD
Sbjct: 374  FELEREPTEEEIIEKVGISPERYHEVMRASKPVFSLHARHLTTQEEFINGITDVDGVGGD 433

Query: 1216 KRRQPAXXXXXXXXXXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEL 1395
            KRRQPA              PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE+
Sbjct: 434  KRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEV 493

Query: 1396 KALMKLKHPARLD 1434
            KALMKLKHPAR+D
Sbjct: 494  KALMKLKHPARVD 506


>ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Fragaria vesca subsp. vesca]
          Length = 520

 Score =  513 bits (1321), Expect = e-174
 Identities = 286/496 (57%), Positives = 340/496 (68%), Gaps = 29/496 (5%)
 Frame = +1

Query: 34   SGVRPASIVAFKTDRTKCSAVAASQEPATIPLEQLKQ--------RRRPKKTNPTKAQTI 189
            S +R   IVAF+TD++   A+ A QE   +P+E  K+        R+ PK     KA  I
Sbjct: 27   STLRKPLIVAFRTDKSDKKALVAPQEKVPLPIETGKKVQKRLGKARKLPKSV---KAALI 83

Query: 190  KQQP--NNELDYNEVAAALENIYKLSPAADVADAEVFD-------RKRRKDLGGGENIDN 342
            ++ P  + ELDYNE AA LEN+YK SP  + +D E  D       RKRRK       I  
Sbjct: 84   EEAPTCDLELDYNEAAAKLENLYKRSPETEASDVENVDGLMIKRGRKRRK------KISE 137

Query: 343  IXXXXXXXXXXXXXXXXXXXEGKKRGREGEIRCGFSE------------KDGXXXXXXXX 486
            +                   + K+   +  +   +++            KD         
Sbjct: 138  VDDKVEKRTSDDIVVRSVTKKAKRLSLDKRVALKWNKDEKVAASVVRKRKDKRSENEMME 197

Query: 487  XXXXYSVSTTDVVSLDWRKMKIPPVLSSSEQARLFKLMQPMKAIFEVKENLHSDLNKEPA 666
                   ++TD+VSLDW+KM+IPPVLSSSE   LFKLMQPMK + EVKE L  DL +EP 
Sbjct: 198  ELVREYSASTDLVSLDWKKMRIPPVLSSSEHTWLFKLMQPMKGLLEVKEILQKDLGREPN 257

Query: 667  EGELAAAVNMTVPQLRRHIEVGHAARNKLIKHNLRLVLFVINKYYQEIASGDKFQDLCQA 846
            +GELA A NMTV Q++RH+EVG AARNKLIKHNLRLVLFVINKY+Q+ A+G KFQDLCQA
Sbjct: 258  KGELAEATNMTVVQVKRHLEVGRAARNKLIKHNLRLVLFVINKYFQDFANGPKFQDLCQA 317

Query: 847  GVKGLITAIDRFEPKRGFRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKL 1026
            GVKGLITAIDRFEP+R FRLSTYGLFWIRH+IIRSMT SSFTRVSFG+ESVR EIQKAKL
Sbjct: 318  GVKGLITAIDRFEPQRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRAEIQKAKL 377

Query: 1027 ELMCELQRLPTEEEIISRVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGV 1206
            E++ +L+R+PTE+EII +VGISPERY +VM+ASK V+SLNSRH VTQEEFIN ITD+DGV
Sbjct: 378  EMLVQLKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLNSRHSVTQEEFINGITDVDGV 437

Query: 1207 GGDKRRQPAXXXXXXXXXXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK 1386
             GD RR+PA              PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK
Sbjct: 438  DGDNRRKPALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK 497

Query: 1387 HELKALMKLKHPARLD 1434
            HE+KALMKLKHPAR+D
Sbjct: 498  HEVKALMKLKHPARVD 513


>ref|XP_024176960.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial [Rosa
            chinensis]
 ref|XP_024176964.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial [Rosa
            chinensis]
 ref|XP_024176971.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial [Rosa
            chinensis]
 ref|XP_024176977.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial [Rosa
            chinensis]
 gb|PRQ60343.1| putative RNA polymerase sigma-70 like domain-containing protein [Rosa
            chinensis]
          Length = 519

 Score =  509 bits (1310), Expect = e-173
 Identities = 280/492 (56%), Positives = 341/492 (69%), Gaps = 25/492 (5%)
 Frame = +1

Query: 34   SGVRPASIVAFKTDRTKCSAVAASQEPATIPLEQLKQRRRPKKTNP----TKAQTIKQQP 201
            S +R   IVAF+TD++  +A+ A QE   +P+E  K+ ++  K        KA  I++ P
Sbjct: 27   STLRKPLIVAFRTDKSNKNALVAPQEKVPLPIETRKKVQKLGKARKLPESVKAALIEEAP 86

Query: 202  --NNELDYNEVAAALENIYKLSPAADVADAEVFD-------RKRRKDLGGGENIDNIXXX 354
              N ELDYNE AA LEN+YK SP  + +D E  D       RKRRK       I  +   
Sbjct: 87   TCNLELDYNEAAAKLENLYKRSPETEASDLENVDGLMIKRSRKRRK------KISEVDDK 140

Query: 355  XXXXXXXXXXXXXXXXEGKKRGREGEIRCGFSE------------KDGXXXXXXXXXXXX 498
                            + K+   +  +   +++            KD             
Sbjct: 141  VEKRKSDDIVVGSRTKKAKRLSLDKRVALKWNKDEKVAAPVVRKRKDRKSENQMIEELVR 200

Query: 499  YSVSTTDVVSLDWRKMKIPPVLSSSEQARLFKLMQPMKAIFEVKENLHSDLNKEPAEGEL 678
               ++TD+VSLDW+KM+IPPVL+SSE   LFKLMQPMKA+ +VKE L  DL +EP +GEL
Sbjct: 201  EYSASTDLVSLDWKKMRIPPVLTSSEHTWLFKLMQPMKALLQVKETLQKDLGREPNKGEL 260

Query: 679  AAAVNMTVPQLRRHIEVGHAARNKLIKHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKG 858
            A A + +V Q+++H+EVG AARNKLIKHNLRLVLFVINKY+Q+ A+G KFQDLCQAGVKG
Sbjct: 261  AEATSTSVVQVKKHLEVGRAARNKLIKHNLRLVLFVINKYFQDFANGPKFQDLCQAGVKG 320

Query: 859  LITAIDRFEPKRGFRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMC 1038
            LITAIDRFEP+R FRLSTYGLFWIRH+IIRSMT SSFTRVSFG+ESVR EIQKAKLE++ 
Sbjct: 321  LITAIDRFEPQRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRAEIQKAKLEMLV 380

Query: 1039 ELQRLPTEEEIISRVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGDK 1218
            +L+R+PTE+EII +VGISPERY +VM+ASK V+SL+SRH VTQEEFINAITD+DGV GD 
Sbjct: 381  QLKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLHSRHSVTQEEFINAITDVDGVEGDN 440

Query: 1219 RRQPAXXXXXXXXXXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELK 1398
            RR+PA              PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE+K
Sbjct: 441  RRKPALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVK 500

Query: 1399 ALMKLKHPARLD 1434
            ALMKLKHPAR+D
Sbjct: 501  ALMKLKHPARVD 512


>ref|XP_015878246.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Ziziphus jujuba]
          Length = 515

 Score =  507 bits (1305), Expect = e-172
 Identities = 278/476 (58%), Positives = 332/476 (69%), Gaps = 16/476 (3%)
 Frame = +1

Query: 55   IVAFKTDRTKCSAVAASQEPATIPLEQLK--QRRRPKKTNPTKA--QTIKQQPNN---EL 213
            IVAFK D+   +A+ A  E   +P+E  K  Q+R  K   P+K     I  + +    E+
Sbjct: 33   IVAFKADKFNETALVAPHEQIPLPIEARKEHQKRLGKVNKPSKRVNAAITDEASTCTLEV 92

Query: 214  DYNEVAAALENIYKLSPAADVADAE------VFDRKRRKDLGGGENIDNIXXXXXXXXXX 375
            DYNE AA LENIYKLSP  D +D E         R+R+K +   +  +            
Sbjct: 93   DYNEAAAKLENIYKLSPMTDASDVEDVGGLKTRGRRRKKKISADDEEEKRTSGSFVRSRR 152

Query: 376  XXXXXXXXXEGK--KRGREGEIR-CGFSEKDGXXXXXXXXXXXXYSVSTTDVVSLDWRKM 546
                     +    K+ +  E+  C    K+                ++TD+VSLDW+KM
Sbjct: 153  KKAKRLNLDKRVELKKNKVDEVNACVRKRKESISENDNIENLVREYSASTDLVSLDWKKM 212

Query: 547  KIPPVLSSSEQARLFKLMQPMKAIFEVKENLHSDLNKEPAEGELAAAVNMTVPQLRRHIE 726
            KIPPVL S+E A LFKLMQP+KA+ +V ENL   L ++P EGELA A NM++ Q++RH+E
Sbjct: 213  KIPPVLPSTEHAWLFKLMQPLKALLQVNENLKQSLGRKPTEGELAEATNMSIAQVKRHLE 272

Query: 727  VGHAARNKLIKHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFEPKRGFRL 906
            VG AARNKLIKHNLRLVLFVINKY+Q+ A+G +FQDLCQAGVKGLITAIDRFEPKR FRL
Sbjct: 273  VGRAARNKLIKHNLRLVLFVINKYFQDFANGPRFQDLCQAGVKGLITAIDRFEPKRRFRL 332

Query: 907  STYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTEEEIISRVG 1086
            STYGLFWIRH+IIRSMT SSF RVSFG+ESVR EIQKAKLELM EL+RLPTEEEII +VG
Sbjct: 333  STYGLFWIRHAIIRSMTLSSFQRVSFGLESVRAEIQKAKLELMFELKRLPTEEEIIEKVG 392

Query: 1087 ISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXXXXX 1266
            ISPERY +VM+ASK V+SL+SRH VTQEEFI+ ITD++GV GD RRQPA           
Sbjct: 393  ISPERYNEVMRASKAVFSLHSRHAVTQEEFIDGITDVEGVEGDNRRQPALLRLALDDVLD 452

Query: 1267 XXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD 1434
               PKESLVIRQRYGLDG+GDRTLGEIAGNLNISREMVRKHE+KALMKLKHPAR+D
Sbjct: 453  SLKPKESLVIRQRYGLDGRGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVD 508


>ref|XP_009410848.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Musa acuminata subsp.
            malaccensis]
          Length = 505

 Score =  505 bits (1300), Expect = e-171
 Identities = 294/479 (61%), Positives = 330/479 (68%), Gaps = 15/479 (3%)
 Frame = +1

Query: 43   RPASIVAFKTDR-TKCSAVA---------ASQEPATIPLEQLKQRRRPKKTNPTKAQTIK 192
            RP   +AFK     KCSA+          A +EP   P    K+ +R K      A T  
Sbjct: 29   RPFFFLAFKGGPGAKCSALVTPPEAVTQEAVKEPKKSPARAAKRSKRGKAVAVVAAPTTA 88

Query: 193  QQPN---NELDYNEVAAALENIYKLSPAADVADAEVFDRKRR-KDLGGGENIDNIXXXXX 360
               +    + DY+EVAAALENIYKLSPA DV+D E   R+   KD  G   +DN+     
Sbjct: 89   APSDACPRDPDYSEVAAALENIYKLSPA-DVSDGEESGRQTVVKD--GSLGVDNVVRNRK 145

Query: 361  XXXXXXXXXXXXXXEGKKRGREG-EIRCGFSEKDGXXXXXXXXXXXXYSVSTTDVVSLDW 537
                            + +   G E R G    +G                +T++ SLDW
Sbjct: 146  KRVKRLGLEERISMRRRPKEEAGTEARRG----EGREFDEDVEILVREYSGSTNLDSLDW 201

Query: 538  RKMKIPPVLSSSEQARLFKLMQPMKAIFEVKENLHSDLNKEPAEGELAAAVNMTVPQLRR 717
            ++MKIPPVLSS+E   LFKLMQPMKAI +VKE ++ DLN+EP +GELA AVNM+VPQLRR
Sbjct: 202  KRMKIPPVLSSAEHTWLFKLMQPMKAILQVKEGMYKDLNREPTDGELADAVNMSVPQLRR 261

Query: 718  HIEVGHAARNKLIKHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFEPKRG 897
            HIEV  AAR+KLIKHNLRLVLFVINKYY EIASG KFQ+ CQAG KGLITAIDRFEPKRG
Sbjct: 262  HIEVARAARDKLIKHNLRLVLFVINKYYPEIASGQKFQEFCQAGAKGLITAIDRFEPKRG 321

Query: 898  FRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTEEEIIS 1077
            FRLSTY LFWIRHSIIRSMT SSFT+V FGIESVRQEI+KAKLEL  EL RLPTEEEI+ 
Sbjct: 322  FRLSTYSLFWIRHSIIRSMTLSSFTKVPFGIESVRQEIKKAKLELSFELGRLPTEEEIVD 381

Query: 1078 RVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXX 1257
            RVGIS ERY +VMKASK V SLN+RHVVTQEEFIN ITDID VGGDKRRQPA        
Sbjct: 382  RVGISLERYNEVMKASKPVLSLNARHVVTQEEFINGITDID-VGGDKRRQPAVLRLALDD 440

Query: 1258 XXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD 1434
                  PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKAL+KLKHP R+D
Sbjct: 441  VLDSLRPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALLKLKHPTRVD 499


>gb|PON96872.1| RNA polymerase sigma factor [Trema orientalis]
          Length = 539

 Score =  506 bits (1303), Expect = e-171
 Identities = 289/514 (56%), Positives = 346/514 (67%), Gaps = 40/514 (7%)
 Frame = +1

Query: 13   SRHRPSPSGVRPASIVAFKTDRTKCSAVAASQEPATIPLEQLKQ-----RRRPKKTNPTK 177
            S HR   S ++   I+AFK D++  +++ A  EP  +P+E  K+     R+  K +N  K
Sbjct: 22   SSHR---STLKKPFILAFKADKSNKTSLVAPHEPIILPVETCKEIKNRVRKAKKASNRVK 78

Query: 178  AQTIKQQPNN--ELDYNEVAAALENIYKLSPA---ADVADAEVF----DRKRRKDLGGGE 330
            A    +   +  E+DYNE AA LE+IYKLSPA   +DV +A        R+R K + G E
Sbjct: 79   AAVTDEASTSTMEVDYNEAAAKLESIYKLSPATESSDVDEATGLMSRGRRRRGKVIEGDE 138

Query: 331  N---------IDNIXXXXXXXXXXXXXXXXXXXEGK-----------------KRGREGE 432
                      I +                    E K                 K  +E  
Sbjct: 139  RTGKKPSDIVIRSRTKKAKRLSLDKRIALKRNKEDKESVSIRKSKDSENEKNEKNEKEKR 198

Query: 433  IRCGFSEKDGXXXXXXXXXXXXYSVSTTDVVSLDWRKMKIPPVLSSSEQARLFKLMQPMK 612
            +     +KD                ++TD++SLDW+KMKIPPVL SSE   LFKLMQP K
Sbjct: 199  VVLVRKKKDSENENEKIDKLVREYSASTDLISLDWKKMKIPPVLPSSEHTWLFKLMQPFK 258

Query: 613  AIFEVKENLHSDLNKEPAEGELAAAVNMTVPQLRRHIEVGHAARNKLIKHNLRLVLFVIN 792
             + +VK+NL +DL +EP EGELA A NM+V Q+++H+EVG AARNKLIKHNLRLVLFV+N
Sbjct: 259  ELRQVKDNLQNDLGREPTEGELAKATNMSVAQVKKHLEVGRAARNKLIKHNLRLVLFVMN 318

Query: 793  KYYQEIASGDKFQDLCQAGVKGLITAIDRFEPKRGFRLSTYGLFWIRHSIIRSMTTSSFT 972
            KY+Q+ A+G KFQDLCQAGVKGLITAIDRFEPKR FRLSTYGLFWIRH+IIRSMT SSFT
Sbjct: 319  KYFQDFANGPKFQDLCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSFT 378

Query: 973  RVSFGIESVRQEIQKAKLELMCELQRLPTEEEIISRVGISPERYRDVMKASKLVYSLNSR 1152
            RVSFG+ESVR EIQKAKLELM EL+RLPTE+EII +VGISPERY DVM+ASK VYSL+S+
Sbjct: 379  RVSFGLESVRVEIQKAKLELMFELKRLPTEDEIIEKVGISPERYHDVMRASKPVYSLHSK 438

Query: 1153 HVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXXXXXXXNPKESLVIRQRYGLDGKGDR 1332
            H VTQEEFINAITDI+GVGGD RR+PA              PKESLVIRQRYGLDGKGDR
Sbjct: 439  HAVTQEEFINAITDIEGVGGDDRRKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDR 498

Query: 1333 TLGEIAGNLNISREMVRKHELKALMKLKHPARLD 1434
            TLGEIAGNLNISREMVRK+E+KALMKLKHPAR+D
Sbjct: 499  TLGEIAGNLNISREMVRKYEVKALMKLKHPARVD 532


>gb|PON50098.1| RNA polymerase sigma factor [Parasponia andersonii]
          Length = 536

 Score =  505 bits (1301), Expect = e-171
 Identities = 280/514 (54%), Positives = 349/514 (67%), Gaps = 37/514 (7%)
 Frame = +1

Query: 4    RFVSRHRPSPSGVRPASIVAFKTDRTKCSAVAASQEPATIPLEQLKQ-----RRRPKKTN 168
            +F+S HRP+   ++   I+AF+ D++  +++ A  EP  +P+E  K+     R+  K +N
Sbjct: 20   KFLS-HRPT---LKKPFILAFEADKSNKTSLVAPHEPIILPVETCKEIKNRVRKAKKASN 75

Query: 169  PTKAQTIKQQPNN--ELDYNEVAAALENIYKLSPAADVADAEVFD------RKRRKDLGG 324
              KA    +   +  E++YNE AA LENIYKLSPA + +D +         R+RR     
Sbjct: 76   RVKAAVTDEASTSTMEVNYNEAAAKLENIYKLSPATESSDVDEATGLMSRGRRRRGKFSE 135

Query: 325  GE----------------------NIDN--IXXXXXXXXXXXXXXXXXXXEGKKRGREGE 432
            G+                      ++D                       E +K  +E  
Sbjct: 136  GDVRTGKKPSDTVIRSRTKKAKRLSLDKRITLKRNKEDRESVSNRKSKDSENEKNEKEKR 195

Query: 433  IRCGFSEKDGXXXXXXXXXXXXYSVSTTDVVSLDWRKMKIPPVLSSSEQARLFKLMQPMK 612
            +     +KD                ++TD+VSLDW+KMKIPPVL SSE   LFKLMQP+K
Sbjct: 196  VVLVRKKKDSKNENEEIDKLVREYSASTDLVSLDWKKMKIPPVLPSSEHTWLFKLMQPLK 255

Query: 613  AIFEVKENLHSDLNKEPAEGELAAAVNMTVPQLRRHIEVGHAARNKLIKHNLRLVLFVIN 792
             + +VKENL +DL +EP +GE+A A NM+V Q+++H+EVG AARNKLIKHNLRLVLFV+N
Sbjct: 256  ELRQVKENLQNDLGREPTDGEVAKATNMSVAQVKKHLEVGRAARNKLIKHNLRLVLFVMN 315

Query: 793  KYYQEIASGDKFQDLCQAGVKGLITAIDRFEPKRGFRLSTYGLFWIRHSIIRSMTTSSFT 972
            KY+Q+ A+G KFQDLCQAGV+GLITAIDRFEPKR FRLSTYG+FWIRH++IRSMT SSFT
Sbjct: 316  KYFQDFANGPKFQDLCQAGVRGLITAIDRFEPKRRFRLSTYGVFWIRHAVIRSMTVSSFT 375

Query: 973  RVSFGIESVRQEIQKAKLELMCELQRLPTEEEIISRVGISPERYRDVMKASKLVYSLNSR 1152
            RVSFG+ESVR EIQKAKLELM EL+RLPTE+EII +V ISPERY DVM+ASK VYSL+S+
Sbjct: 376  RVSFGLESVRVEIQKAKLELMFELKRLPTEDEIIEKVSISPERYHDVMRASKPVYSLHSK 435

Query: 1153 HVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXXXXXXXNPKESLVIRQRYGLDGKGDR 1332
            H VTQEEFINAITD++GVGGD RR+PA              PKESLVIRQRYGLDGKGDR
Sbjct: 436  HAVTQEEFINAITDVEGVGGDDRRKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDR 495

Query: 1333 TLGEIAGNLNISREMVRKHELKALMKLKHPARLD 1434
            TLGEIAGNLNISREMVRK+E+KALMKLKHPAR+D
Sbjct: 496  TLGEIAGNLNISREMVRKYEVKALMKLKHPARVD 529


>gb|OWM79621.1| hypothetical protein CDL15_Pgr023033 [Punica granatum]
 gb|PKI72417.1| hypothetical protein CRG98_007163 [Punica granatum]
          Length = 514

 Score =  500 bits (1287), Expect = e-169
 Identities = 278/493 (56%), Positives = 337/493 (68%), Gaps = 15/493 (3%)
 Frame = +1

Query: 1    VRFVSRHRPSPSGVRPASIVAFKTDRTKCSAVAASQEPATIPLEQLKQRRRP----KKTN 168
            V F S+   S S V+   IVAF+ ++   +A+   Q+    P+E  K++++      K++
Sbjct: 15   VGFNSKFSTSKSVVKRPLIVAFRGEKNNSTALLTHQDQTHSPVETSKKQKKKVGNGSKSS 74

Query: 169  PTKAQTIKQQPNN-ELDYNEVAAALENIYKLSPAADVADAEVFD------RKRRKDLGGG 327
                 T +  P   ELDY + AA LE+IYKL+   + +DAE         R+RRK    G
Sbjct: 75   RKAVLTDEVSPCTLELDYYDAAAKLEDIYKLTSTPNTSDAEEVTGEKKRGRQRRKKTAEG 134

Query: 328  ENIDNIXXXXXXXXXXXXXXXXXXXEG----KKRGREGEIRCGFSEKDGXXXXXXXXXXX 495
            +  +N                    +     K    E  +     +KD            
Sbjct: 135  DEEENDEVGQTVVRNRTKKAKRLSLDRRIALKNNKDEKPVASEQKKKDVKSEDEKIERLV 194

Query: 496  XYSVSTTDVVSLDWRKMKIPPVLSSSEQARLFKLMQPMKAIFEVKENLHSDLNKEPAEGE 675
                ++TD+VSLDW+KMKIPPVL S+E A LFKLMQPMKA+FEV+ENL + L ++PA+ E
Sbjct: 195  RDYSASTDLVSLDWKKMKIPPVLPSTEHAWLFKLMQPMKALFEVRENLRAGLGRQPADAE 254

Query: 676  LAAAVNMTVPQLRRHIEVGHAARNKLIKHNLRLVLFVINKYYQEIASGDKFQDLCQAGVK 855
            LA A  MTV Q+R+H+EVG AARNKLIKHNLRLVLFVINKY+Q+ A+G +FQDLCQAGVK
Sbjct: 255  LADATKMTVAQVRKHLEVGRAARNKLIKHNLRLVLFVINKYFQDFANGSRFQDLCQAGVK 314

Query: 856  GLITAIDRFEPKRGFRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELM 1035
            GLI AIDRFEP R  RLSTY LFWIRH+IIRSMT SSFTRVSFG+ESVR EIQ+AKLEL+
Sbjct: 315  GLIAAIDRFEPNRKLRLSTYSLFWIRHAIIRSMTVSSFTRVSFGLESVRVEIQRAKLELL 374

Query: 1036 CELQRLPTEEEIISRVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGD 1215
             EL R+PTE+EII RVG+SPERY +VM+ASK VYSL+SRH VTQEEFI+AITD+DGVGGD
Sbjct: 375  FELNRMPTEDEIIERVGMSPERYHEVMRASKPVYSLHSRHAVTQEEFISAITDVDGVGGD 434

Query: 1216 KRRQPAXXXXXXXXXXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEL 1395
             RRQPA              PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE+
Sbjct: 435  NRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEV 494

Query: 1396 KALMKLKHPARLD 1434
            KALMKLKHPAR+D
Sbjct: 495  KALMKLKHPARVD 507


>ref|XP_007219010.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial [Prunus
            persica]
 gb|ONI25507.1| hypothetical protein PRUPE_2G307500 [Prunus persica]
          Length = 519

 Score =  499 bits (1285), Expect = e-169
 Identities = 280/487 (57%), Positives = 331/487 (67%), Gaps = 20/487 (4%)
 Frame = +1

Query: 34   SGVRPASIVAFKTDRTKCSAVAASQEPATIPLEQLKQRRRPKKTNPTKAQTIKQQPNN-- 207
            S +R   IVAFKTD    +A+ A QE   +P+E  K+ ++        A+++K    +  
Sbjct: 26   STLRKPLIVAFKTDEANKTALVAPQEKIPLPIETRKKHQKRLGKARKLAKSVKSATTDVA 85

Query: 208  -----ELDYNEVAAALENIYKLSPAADV-ADAEVFD------RKRRK-----DLGGGENI 336
                 E+DYNE AA LEN+YK SP  +  +D E  D      RKRRK     D    EN 
Sbjct: 86   SPCTLEVDYNEAAAKLENLYKRSPETEANSDVEDVDGLMRRGRKRRKKTSESDADKDENR 145

Query: 337  DNIXXXXXXXXXXXXXXXXXXXEGKKRGREGEIRCGFSEKDGXXXXXXXXXXXXYSVST- 513
             +                      K    E  I     ++                 ST 
Sbjct: 146  TSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVISSIVRKRKSRKNENEKIEELVREYSTS 205

Query: 514  TDVVSLDWRKMKIPPVLSSSEQARLFKLMQPMKAIFEVKENLHSDLNKEPAEGELAAAVN 693
            TD+VSLDW+KMKIPPVL+SSE A LFKLMQPMK + EVKENL  DL +EP  GELA A N
Sbjct: 206  TDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKGLLEVKENLQKDLGREPTNGELAEATN 265

Query: 694  MTVPQLRRHIEVGHAARNKLIKHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAI 873
            M+V Q+++H+EVG AAR+KLIKHNLRLVLFV+NKY+Q+ A+G KFQDLCQAGVKGLITAI
Sbjct: 266  MSVVQVKKHLEVGRAARSKLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQAGVKGLITAI 325

Query: 874  DRFEPKRGFRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRL 1053
            DRFEPKR FRLSTYGLFWIRH+IIRSMT SSFTRVSFG+ESVR EIQKAKL ++  L+R+
Sbjct: 326  DRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRAEIQKAKLGMLFALKRM 385

Query: 1054 PTEEEIISRVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPA 1233
            PTE+EII +VGISPERY +VM+ASK V+SL+SRH  TQEEFIN ITD+DGV GD R++PA
Sbjct: 386  PTEDEIIEKVGISPERYHEVMRASKPVFSLHSRHTTTQEEFINGITDVDGVEGDNRQKPA 445

Query: 1234 XXXXXXXXXXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKL 1413
                          PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE+KALMKL
Sbjct: 446  LLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKL 505

Query: 1414 KHPARLD 1434
            KHPAR+D
Sbjct: 506  KHPARVD 512


>ref|XP_022922776.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
            isoform X2 [Cucurbita moschata]
 ref|XP_022922777.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
            isoform X2 [Cucurbita moschata]
          Length = 509

 Score =  497 bits (1279), Expect = e-168
 Identities = 273/480 (56%), Positives = 327/480 (68%), Gaps = 13/480 (2%)
 Frame = +1

Query: 34   SGVRPASIVAFKTDRTKCSAVAASQEPATIPLE-----QLKQRRRPKKTNPTKAQTIKQQ 198
            S ++  SIVAFK D+   + + +  E  T+P+E     Q +  +  K     KA  I + 
Sbjct: 26   SALKRPSIVAFKVDKHTNTTLVSPHEQVTLPVESNNRNQKRTGKSSKSLKRVKAVLIDEA 85

Query: 199  P--NNELDYNEVAAALENIYKLSPAADVADAEVFD------RKRRKDLGGGENIDNIXXX 354
                +++DYNE AA LENI+KLSP  +  D E  D      ++RRK LG     D +   
Sbjct: 86   TPCTSDVDYNEAAAKLENIFKLSPVTEDTDMENEDGRPKRGQQRRKKLGK-RPCDGVVRN 144

Query: 355  XXXXXXXXXXXXXXXXEGKKRGREGEIRCGFSEKDGXXXXXXXXXXXXYSVSTTDVVSLD 534
                            +  K G+         +KD                ++TD+VSLD
Sbjct: 145  QTKRIKRLDLDKRIALKSNKEGKSAPSLS--KQKDTKSEADEIDDLVRNYSASTDLVSLD 202

Query: 535  WRKMKIPPVLSSSEQARLFKLMQPMKAIFEVKENLHSDLNKEPAEGELAAAVNMTVPQLR 714
            W+KMKIPPVL SSE  RLFKL+QPMKA+ + +E L   L +EP EGELA A NM V Q+R
Sbjct: 203  WKKMKIPPVLPSSEHTRLFKLVQPMKALIQAQEELQKGLGREPTEGELANATNMNVIQVR 262

Query: 715  RHIEVGHAARNKLIKHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFEPKR 894
            R +EVG AARNKLIKHNLRLVLFVINKY+++ ASG KFQDLCQAGVKGLITAIDRFEPKR
Sbjct: 263  RQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKR 322

Query: 895  GFRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTEEEII 1074
             FRLSTY LFWIRH+IIRSMT SSFTRVSFG++SVR EIQ+AKLEL+CEL RLPTEEE+I
Sbjct: 323  RFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLCELHRLPTEEEVI 382

Query: 1075 SRVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXX 1254
            ++VGISPERY +VM+A+K VYSL+SRH  T EEFI+ I D++G GGD RRQ A       
Sbjct: 383  AKVGISPERYLEVMRATKPVYSLHSRHSTTSEEFISGIADVEGTGGDNRRQSALLRLALD 442

Query: 1255 XXXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD 1434
                   PKESLVIRQRYGLDGKG+RTLGEIAGNLNISREMVRKHE+KALMKLKHPAR+D
Sbjct: 443  DVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVD 502


>ref|XP_022922775.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
            isoform X1 [Cucurbita moschata]
          Length = 517

 Score =  497 bits (1279), Expect = e-168
 Identities = 273/480 (56%), Positives = 327/480 (68%), Gaps = 13/480 (2%)
 Frame = +1

Query: 34   SGVRPASIVAFKTDRTKCSAVAASQEPATIPLE-----QLKQRRRPKKTNPTKAQTIKQQ 198
            S ++  SIVAFK D+   + + +  E  T+P+E     Q +  +  K     KA  I + 
Sbjct: 34   SALKRPSIVAFKVDKHTNTTLVSPHEQVTLPVESNNRNQKRTGKSSKSLKRVKAVLIDEA 93

Query: 199  P--NNELDYNEVAAALENIYKLSPAADVADAEVFD------RKRRKDLGGGENIDNIXXX 354
                +++DYNE AA LENI+KLSP  +  D E  D      ++RRK LG     D +   
Sbjct: 94   TPCTSDVDYNEAAAKLENIFKLSPVTEDTDMENEDGRPKRGQQRRKKLGK-RPCDGVVRN 152

Query: 355  XXXXXXXXXXXXXXXXEGKKRGREGEIRCGFSEKDGXXXXXXXXXXXXYSVSTTDVVSLD 534
                            +  K G+         +KD                ++TD+VSLD
Sbjct: 153  QTKRIKRLDLDKRIALKSNKEGKSAPSLS--KQKDTKSEADEIDDLVRNYSASTDLVSLD 210

Query: 535  WRKMKIPPVLSSSEQARLFKLMQPMKAIFEVKENLHSDLNKEPAEGELAAAVNMTVPQLR 714
            W+KMKIPPVL SSE  RLFKL+QPMKA+ + +E L   L +EP EGELA A NM V Q+R
Sbjct: 211  WKKMKIPPVLPSSEHTRLFKLVQPMKALIQAQEELQKGLGREPTEGELANATNMNVIQVR 270

Query: 715  RHIEVGHAARNKLIKHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFEPKR 894
            R +EVG AARNKLIKHNLRLVLFVINKY+++ ASG KFQDLCQAGVKGLITAIDRFEPKR
Sbjct: 271  RQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKR 330

Query: 895  GFRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTEEEII 1074
             FRLSTY LFWIRH+IIRSMT SSFTRVSFG++SVR EIQ+AKLEL+CEL RLPTEEE+I
Sbjct: 331  RFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLCELHRLPTEEEVI 390

Query: 1075 SRVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXX 1254
            ++VGISPERY +VM+A+K VYSL+SRH  T EEFI+ I D++G GGD RRQ A       
Sbjct: 391  AKVGISPERYLEVMRATKPVYSLHSRHSTTSEEFISGIADVEGTGGDNRRQSALLRLALD 450

Query: 1255 XXXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD 1434
                   PKESLVIRQRYGLDGKG+RTLGEIAGNLNISREMVRKHE+KALMKLKHPAR+D
Sbjct: 451  DVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVD 510


>ref|XP_020105381.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
            [Ananas comosus]
          Length = 523

 Score =  497 bits (1279), Expect = e-168
 Identities = 287/496 (57%), Positives = 333/496 (67%), Gaps = 25/496 (5%)
 Frame = +1

Query: 22   RPSPSGVRPASIVAFKTDR-TKCSAVAASQEPATIPLEQLKQR--RRPKKTNPTKA---- 180
            RP P    P    AF T R  +CSA+A+  E    P  +   R  ++PK+     A    
Sbjct: 26   RPPP----PLLFFAFDTTRPARCSALASPSETLKEPPRKTLTRAPKQPKRVKAVSAAAAA 81

Query: 181  ---------QTIKQQPNNELDYNEVAAALENIYKLSPA--ADVADAEVFDRKRR------ 309
                           P  +LDYNEVAAALENIYKLSPA  +D+ D+    +KRR      
Sbjct: 82   AATAAASSPSAAAPPPPPDLDYNEVAAALENIYKLSPAEVSDIEDSSGGRKKRRGRKKME 141

Query: 310  -KDLGGGENIDNIXXXXXXXXXXXXXXXXXXXEGKKRGREGEIRCGFSEKDGXXXXXXXX 486
             +D  G  N+  +                     K   +  ++R     ++         
Sbjct: 142  EEDEEGEGNVGRVSVVRSGRRRGRRLNLQKRVALKSERKGEKVRVSKRGENRDLDEDLER 201

Query: 487  XXXXYSVSTTDVVSLDWRKMKIPPVLSSSEQARLFKLMQPMKAIFEVKENLHSDLNKEPA 666
                +S S TD+ S DW+KMKIPPVLSSSE   LFKLMQPMKAIFEVKENL  DL++E  
Sbjct: 202  LVREHSQS-TDLASFDWKKMKIPPVLSSSEHTWLFKLMQPMKAIFEVKENLQKDLDRELT 260

Query: 667  EGELAAAVNMTVPQLRRHIEVGHAARNKLIKHNLRLVLFVINKYYQEIASGDKFQDLCQA 846
            +GELA+A+NM+V +L+ HIEVG AARNKLIKHNLRLVLFVINKYY EIA+  KFQDLCQA
Sbjct: 261  DGELASAMNMSVSELQWHIEVGQAARNKLIKHNLRLVLFVINKYYPEIANAQKFQDLCQA 320

Query: 847  GVKGLITAIDRFEPKRGFRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKL 1026
            G KGLITAIDRFEP+RGFRLSTYGLFWIRHSI RSMTTSSF R+ FG+ES+RQEIQKAKL
Sbjct: 321  GAKGLITAIDRFEPRRGFRLSTYGLFWIRHSINRSMTTSSFMRLPFGLESLRQEIQKAKL 380

Query: 1027 ELMCELQRLPTEEEIISRVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGV 1206
            EL  EL R PTEEEII RVGISPERYRD +KASK V+SL+++H VTQEEFINAITD+DGV
Sbjct: 381  ELSFELGRSPTEEEIIDRVGISPERYRDALKASKPVFSLHAKHAVTQEEFINAITDVDGV 440

Query: 1207 GGDKRRQPAXXXXXXXXXXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK 1386
             GDKRRQ A              PKESLVIRQR+GLDGKG RTLGEIA NLNISREMVRK
Sbjct: 441  EGDKRRQSALLRLALDDVLDSLKPKESLVIRQRFGLDGKGYRTLGEIARNLNISREMVRK 500

Query: 1387 HELKALMKLKHPARLD 1434
            +ELKALMKLKHPAR++
Sbjct: 501  YELKALMKLKHPARVN 516


>ref|XP_022984454.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
            isoform X2 [Cucurbita maxima]
 ref|XP_022984455.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
            isoform X2 [Cucurbita maxima]
          Length = 509

 Score =  495 bits (1275), Expect = e-168
 Identities = 275/482 (57%), Positives = 327/482 (67%), Gaps = 15/482 (3%)
 Frame = +1

Query: 34   SGVRPASIVAFKTDRTKCSAVAASQEPATIPLEQLKQRRRPKKTNPT-------KAQTIK 192
            S  +  SIVAFK D+   + + +  E  T+P+E     R  K+T  T       KA  I 
Sbjct: 26   SASKRPSIVAFKVDKHTNATLVSPHEQVTLPVES--NNRNQKRTGKTSKSLKRVKAVLID 83

Query: 193  QQP--NNELDYNEVAAALENIYKLSPAADVADAEVFD------RKRRKDLGGGENIDNIX 348
            +     +++DYNE AA LENI+KLSP  +  D E  D      ++RRK LG     D + 
Sbjct: 84   EATPCTSDVDYNEAAAKLENIFKLSPVTEDTDMENEDGRPKRVQQRRKKLGK-RPCDGVV 142

Query: 349  XXXXXXXXXXXXXXXXXXEGKKRGREGEIRCGFSEKDGXXXXXXXXXXXXYSVSTTDVVS 528
                              +  K G+         +KD                ++TD+VS
Sbjct: 143  RNQTKRIKRLDLDRRIALKSNKEGKSAPSLS--IQKDTKSEADEIDDLVRNYSASTDLVS 200

Query: 529  LDWRKMKIPPVLSSSEQARLFKLMQPMKAIFEVKENLHSDLNKEPAEGELAAAVNMTVPQ 708
            LDW+KMKIPPVL SSE  RLFKL+QPMKA+ + +E L   L +EP EGELA A NM V Q
Sbjct: 201  LDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQAQEELQKGLGREPTEGELANATNMNVIQ 260

Query: 709  LRRHIEVGHAARNKLIKHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFEP 888
            +RR +EVG AARNKLIKHNLRLVLFVINKY+++ ASG KFQDLCQAGVKGLITAIDRFEP
Sbjct: 261  VRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLITAIDRFEP 320

Query: 889  KRGFRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTEEE 1068
            KR FRLSTY LFWIRH+IIRSMT SSFTRVSFG++SVR EIQ+AKLEL+CEL RLPTEEE
Sbjct: 321  KRRFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLCELHRLPTEEE 380

Query: 1069 IISRVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXX 1248
            +I++VGISPERY +VM+A+K VYSL+SRH  T EEFI+ I D++G GGD RRQ A     
Sbjct: 381  VIAKVGISPERYLEVMRATKPVYSLHSRHSTTSEEFISGIADVEGTGGDNRRQSALLRLA 440

Query: 1249 XXXXXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPAR 1428
                     PKESLVIRQRYGLDGKG+RTLGEIAGNLNISREMVRKHE+KALMKLKHPAR
Sbjct: 441  LDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPAR 500

Query: 1429 LD 1434
            +D
Sbjct: 501  VD 502


>ref|XP_022984453.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
            isoform X1 [Cucurbita maxima]
          Length = 517

 Score =  495 bits (1275), Expect = e-167
 Identities = 275/482 (57%), Positives = 327/482 (67%), Gaps = 15/482 (3%)
 Frame = +1

Query: 34   SGVRPASIVAFKTDRTKCSAVAASQEPATIPLEQLKQRRRPKKTNPT-------KAQTIK 192
            S  +  SIVAFK D+   + + +  E  T+P+E     R  K+T  T       KA  I 
Sbjct: 34   SASKRPSIVAFKVDKHTNATLVSPHEQVTLPVES--NNRNQKRTGKTSKSLKRVKAVLID 91

Query: 193  QQP--NNELDYNEVAAALENIYKLSPAADVADAEVFD------RKRRKDLGGGENIDNIX 348
            +     +++DYNE AA LENI+KLSP  +  D E  D      ++RRK LG     D + 
Sbjct: 92   EATPCTSDVDYNEAAAKLENIFKLSPVTEDTDMENEDGRPKRVQQRRKKLGK-RPCDGVV 150

Query: 349  XXXXXXXXXXXXXXXXXXEGKKRGREGEIRCGFSEKDGXXXXXXXXXXXXYSVSTTDVVS 528
                              +  K G+         +KD                ++TD+VS
Sbjct: 151  RNQTKRIKRLDLDRRIALKSNKEGKSAPSLS--IQKDTKSEADEIDDLVRNYSASTDLVS 208

Query: 529  LDWRKMKIPPVLSSSEQARLFKLMQPMKAIFEVKENLHSDLNKEPAEGELAAAVNMTVPQ 708
            LDW+KMKIPPVL SSE  RLFKL+QPMKA+ + +E L   L +EP EGELA A NM V Q
Sbjct: 209  LDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQAQEELQKGLGREPTEGELANATNMNVIQ 268

Query: 709  LRRHIEVGHAARNKLIKHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFEP 888
            +RR +EVG AARNKLIKHNLRLVLFVINKY+++ ASG KFQDLCQAGVKGLITAIDRFEP
Sbjct: 269  VRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLITAIDRFEP 328

Query: 889  KRGFRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTEEE 1068
            KR FRLSTY LFWIRH+IIRSMT SSFTRVSFG++SVR EIQ+AKLEL+CEL RLPTEEE
Sbjct: 329  KRRFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLCELHRLPTEEE 388

Query: 1069 IISRVGISPERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXX 1248
            +I++VGISPERY +VM+A+K VYSL+SRH  T EEFI+ I D++G GGD RRQ A     
Sbjct: 389  VIAKVGISPERYLEVMRATKPVYSLHSRHSTTSEEFISGIADVEGTGGDNRRQSALLRLA 448

Query: 1249 XXXXXXXXNPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPAR 1428
                     PKESLVIRQRYGLDGKG+RTLGEIAGNLNISREMVRKHE+KALMKLKHPAR
Sbjct: 449  LDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPAR 508

Query: 1429 LD 1434
            +D
Sbjct: 509  VD 510


>ref|XP_022738891.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
            [Durio zibethinus]
          Length = 513

 Score =  495 bits (1274), Expect = e-167
 Identities = 269/474 (56%), Positives = 326/474 (68%), Gaps = 14/474 (2%)
 Frame = +1

Query: 55   IVAFKTDRTKCSAVAASQEPATIPLEQLKQRRRPKKTNPTKAQTIKQQPNNE-------L 213
            IVAFK D++  +A+   QE   +P+E  K+ ++ +  +   ++T+     +E       +
Sbjct: 33   IVAFKADKSNNTALVTPQEHILLPIETAKKNQKRQGKSKKASKTVNHVFTDEGSPCTLEV 92

Query: 214  DYNEVAAALENIYKLSPAADVADA--EVFDRKRRKDL-----GGGENIDNIXXXXXXXXX 372
            DYNE AA LENIYKLSP+   +D   E+  R++R+       G  +N +N          
Sbjct: 93   DYNEAAAKLENIYKLSPSTRTSDVKEEIKGRQQRRKRSKESDGKADNDNNQVVVRNQSKK 152

Query: 373  XXXXXXXXXXEGKKRGREGEIRCGFSEKDGXXXXXXXXXXXXYSVSTTDVVSLDWRKMKI 552
                      E KK   E  +   + +K                 ++T +VSLDW+KM I
Sbjct: 153  TKRLSLDKRIELKKNREEKPVASVWRKKSTENESEKIDALVRDYSASTVLVSLDWKKMSI 212

Query: 553  PPVLSSSEQARLFKLMQPMKAIFEVKENLHSDLNKEPAEGELAAAVNMTVPQLRRHIEVG 732
            PPVL S+E   LFKLMQPMK + + KENL  DL + P E ELA A NM+  Q+ +H+E+G
Sbjct: 213  PPVLPSTEHTWLFKLMQPMKTLLQAKENLQKDLGRYPTEDELAKATNMSAAQVTKHLEIG 272

Query: 733  HAARNKLIKHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFEPKRGFRLST 912
             AARNKLIKHNLRLVLFVINKY+Q+ A+G +FQDLCQAGVKGLITAIDRFEP+R FRLST
Sbjct: 273  RAARNKLIKHNLRLVLFVINKYFQDFANGPRFQDLCQAGVKGLITAIDRFEPRRKFRLST 332

Query: 913  YGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTEEEIISRVGIS 1092
            Y LFWIRH+IIRSMT SSFTRV FG+ESVR EIQ+AKLEL+ EL R PTEEEII +VGIS
Sbjct: 333  YSLFWIRHAIIRSMTVSSFTRVPFGLESVRVEIQRAKLELLFELHRKPTEEEIIKKVGIS 392

Query: 1093 PERYRDVMKASKLVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXXXXXXX 1272
            PERY++VM+ASK V SL+SRH VTQEEFIN ITD+DGVGGD RRQPA             
Sbjct: 393  PERYQEVMRASKPVGSLHSRHSVTQEEFINGITDVDGVGGDHRRQPALLRLAIDDVLDSL 452

Query: 1273 NPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKHPARLD 1434
             PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE+KALMKLKHPAR+D
Sbjct: 453  KPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVD 506


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