BLASTX nr result

ID: Ophiopogon25_contig00017937 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00017937
         (360 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK78565.1| uncharacterized protein A4U43_C02F20160 [Asparagu...    61   2e-08
ref|XP_020254733.1| nuclear pore complex protein NUP107 isoform ...    61   2e-08
ref|XP_020254732.1| nuclear pore complex protein NUP107 isoform ...    61   2e-08
ref|XP_009384165.1| PREDICTED: nuclear pore complex protein NUP1...    57   6e-07
ref|XP_008778111.1| PREDICTED: nuclear pore complex protein NUP1...    57   8e-07
gb|PKA59339.1| hypothetical protein AXF42_Ash001433 [Apostasia s...    55   3e-06

>gb|ONK78565.1| uncharacterized protein A4U43_C02F20160 [Asparagus officinalis]
          Length = 1026

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 30/35 (85%), Positives = 31/35 (88%)
 Frame = -3

Query: 358 YTLEVALCCLIVNGDGLGVYEANDGGPLATVFAAG 254
           YTLEVAL CL VNGDGLGV+EANDGG LATV AAG
Sbjct: 872 YTLEVALRCLAVNGDGLGVHEANDGGLLATVMAAG 906


>ref|XP_020254733.1| nuclear pore complex protein NUP107 isoform X2 [Asparagus
            officinalis]
          Length = 1092

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 30/35 (85%), Positives = 31/35 (88%)
 Frame = -3

Query: 358  YTLEVALCCLIVNGDGLGVYEANDGGPLATVFAAG 254
            YTLEVAL CL VNGDGLGV+EANDGG LATV AAG
Sbjct: 938  YTLEVALRCLAVNGDGLGVHEANDGGLLATVMAAG 972


>ref|XP_020254732.1| nuclear pore complex protein NUP107 isoform X1 [Asparagus
            officinalis]
          Length = 1093

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 30/35 (85%), Positives = 31/35 (88%)
 Frame = -3

Query: 358  YTLEVALCCLIVNGDGLGVYEANDGGPLATVFAAG 254
            YTLEVAL CL VNGDGLGV+EANDGG LATV AAG
Sbjct: 938  YTLEVALRCLAVNGDGLGVHEANDGGLLATVMAAG 972


>ref|XP_009384165.1| PREDICTED: nuclear pore complex protein NUP107 [Musa acuminata subsp.
            malaccensis]
          Length = 1071

 Score = 57.0 bits (136), Expect = 6e-07
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = -3

Query: 358  YTLEVALCCLIVNGDGLGVYEANDGGPLATVFAAG 254
            Y +EVAL CL VNGDGLG++EANDGG LATV AAG
Sbjct: 918  YRIEVALHCLAVNGDGLGLHEANDGGLLATVIAAG 952


>ref|XP_008778111.1| PREDICTED: nuclear pore complex protein NUP107 [Phoenix
           dactylifera]
 ref|XP_008778112.1| PREDICTED: nuclear pore complex protein NUP107 [Phoenix
           dactylifera]
 ref|XP_008778113.1| PREDICTED: nuclear pore complex protein NUP107 [Phoenix
           dactylifera]
 ref|XP_008778114.1| PREDICTED: nuclear pore complex protein NUP107 [Phoenix
           dactylifera]
 ref|XP_008778115.1| PREDICTED: nuclear pore complex protein NUP107 [Phoenix
           dactylifera]
 ref|XP_017696275.1| PREDICTED: nuclear pore complex protein NUP107 [Phoenix
           dactylifera]
          Length = 647

 Score = 56.6 bits (135), Expect = 8e-07
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = -3

Query: 358 YTLEVALCCLIVNGDGLGVYEANDGGPLATVFAAG 254
           Y +EVAL CL VNGDGLG++EANDGG LATV AAG
Sbjct: 493 YCIEVALRCLAVNGDGLGLHEANDGGLLATVVAAG 527


>gb|PKA59339.1| hypothetical protein AXF42_Ash001433 [Apostasia shenzhenica]
          Length = 1065

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 25/35 (71%), Positives = 31/35 (88%)
 Frame = -3

Query: 358  YTLEVALCCLIVNGDGLGVYEANDGGPLATVFAAG 254
            Y++EVAL CL VNGDGLG++++NDGG LATV AAG
Sbjct: 934  YSVEVALRCLAVNGDGLGLHDSNDGGILATVIAAG 968


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