BLASTX nr result

ID: Ophiopogon25_contig00017873 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00017873
         (386 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OAY83094.1| Arabinogalactan peptide 22 [Ananas comosus]             52   1e-06

>gb|OAY83094.1| Arabinogalactan peptide 22 [Ananas comosus]
          Length = 63

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 26/39 (66%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
 Frame = +3

Query: 105 HGDGHATA---RSVDGKTIDQGIAYVLMLAALLVTYFVH 212
           HG   ATA     +DG  IDQGIAYVLML ALL+TYFVH
Sbjct: 25  HGHSEATAVPVHRIDGNAIDQGIAYVLMLVALLITYFVH 63


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