BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00017826
         (960 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKU86149.1| ubiquitin-conjugating enzyme E2 S [Dendrobium cat...    43   4e-06

>gb|PKU86149.1| ubiquitin-conjugating enzyme E2 S [Dendrobium catenatum]
          Length = 221

 Score = 43.1 bits (100), Expect(2) = 4e-06
 Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
 Frame = +3

Query: 153 DWY-----RLAYAKYITPLPSKDQWVTCEKDYKLGAPHSRMPRGRSKVK 284
           DWY     R+AY   I  LP KDQW+  +    +G P +  PRGR K K
Sbjct: 97  DWYFVYRYRMAYEGAIGTLPDKDQWLVVQNVVDIGVPSTSRPRGRPKKK 145



 Score = 37.0 bits (84), Expect(2) = 4e-06
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 8/49 (16%)
 Frame = +1

Query: 352 KRIHKCARCHEYSHQRNTGKRP--------INPRADPLPQQPLMTPKLT 474
           K++HKC+RC  + H R+T K P        I  R +PLP++  +  + T
Sbjct: 155 KKVHKCSRCSLWGHHRSTCKNPLQKINDVAITQRMNPLPKRSKLESRRT 203