BLASTX nr result

ID: Ophiopogon25_contig00017222 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00017222
         (350 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008802494.1| PREDICTED: WD repeat-containing protein 44-l...    54   5e-06
ref|XP_010932998.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat-co...    54   7e-06

>ref|XP_008802494.1| PREDICTED: WD repeat-containing protein 44-like [Phoenix
           dactylifera]
          Length = 857

 Score = 54.3 bits (129), Expect = 5e-06
 Identities = 36/93 (38%), Positives = 41/93 (44%)
 Frame = -2

Query: 328 MRNSQAVADXXXXXXXEFYESLDRILXXXXXXXXXXXXXXXXXXXGRRVPRFPPLLATSY 149
           MR S A          EFYESLDRIL                    RRVPRFPP +A SY
Sbjct: 1   MRASGAATPAAAEEEEEFYESLDRILSSSCSSTSASDDDADHHHH-RRVPRFPPPIAASY 59

Query: 148 EVWMAEPGSXXXXXXXXXXXXXXXGDPALARRR 50
           +VW++EP S                DPAL+R R
Sbjct: 60  DVWISEPSSVEERRRRLLHQMGLTADPALSRSR 92


>ref|XP_010932998.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat-containing protein
           44-like [Elaeis guineensis]
          Length = 800

 Score = 53.9 bits (128), Expect = 7e-06
 Identities = 31/86 (36%), Positives = 39/86 (45%)
 Frame = -2

Query: 277 FYESLDRILXXXXXXXXXXXXXXXXXXXGRRVPRFPPLLATSYEVWMAEPGSXXXXXXXX 98
           FYESLDRIL                    R +PRFPP  + S +VW++EP S        
Sbjct: 10  FYESLDRILSSSCSSTSASDDDAHPCRRRRHLPRFPPPSSVSLDVWISEPASIEERRQRL 69

Query: 97  XXXXXXXGDPALARRRSPIRSRSEGD 20
                  GDPALARR++P      G+
Sbjct: 70  FQQLGLAGDPALARRKAPAADGPPGE 95


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