BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00016941
         (643 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020258675.1| protein RNA-directed DNA methylation 3, part...   285   4e-85
gb|ONK75729.1| uncharacterized protein A4U43_C03F19930 [Asparagu...   281   5e-84
ref|XP_010933194.1| PREDICTED: protein RNA-directed DNA methylat...   219   2e-62
ref|XP_010933206.1| PREDICTED: protein RNA-directed DNA methylat...   219   2e-62
ref|XP_010933199.1| PREDICTED: protein RNA-directed DNA methylat...   219   4e-62
ref|XP_010933212.1| PREDICTED: protein RNA-directed DNA methylat...   219   4e-62
ref|XP_008794002.1| PREDICTED: protein RNA-directed DNA methylat...   219   4e-62
ref|XP_020587140.1| protein RNA-directed DNA methylation 3 [Phal...   208   3e-58
ref|XP_020682212.1| protein RNA-directed DNA methylation 3 [Dend...   202   4e-56
gb|OAY66311.1| Protein RNA-directed DNA methylation 3 [Ananas co...   196   3e-54
ref|XP_020091605.1| protein RNA-directed DNA methylation 3 isofo...   196   3e-54
ref|XP_020091607.1| protein RNA-directed DNA methylation 3 isofo...   196   4e-54
ref|XP_020091606.1| protein RNA-directed DNA methylation 3 isofo...   196   4e-54
ref|XP_020091604.1| protein RNA-directed DNA methylation 3 isofo...   196   4e-54
ref|XP_020091602.1| protein RNA-directed DNA methylation 3 isofo...   196   4e-54
ref|XP_009409884.1| PREDICTED: protein RNA-directed DNA methylat...   176   4e-47
ref|XP_009409883.1| PREDICTED: protein RNA-directed DNA methylat...   176   4e-47
gb|EMS65052.1| hypothetical protein TRIUR3_18947 [Triticum urartu]    174   1e-46
ref|XP_004961584.1| protein RNA-directed DNA methylation 3 [Seta...   174   2e-46
gb|AQK94723.1| Protein RNA-directed DNA methylation 3, partial [...   169   1e-45

>ref|XP_020258675.1| protein RNA-directed DNA methylation 3, partial [Asparagus
            officinalis]
          Length = 1734

 Score =  285 bits (728), Expect = 4e-85
 Identities = 157/216 (72%), Positives = 169/216 (78%), Gaps = 2/216 (0%)
 Frame = +1

Query: 1    DSVKVSDGPLEGREGTVRHMYKGTLFIYDESQEENSGLFCAKSDLCENITPPKDSSFRKG 180
            D +KV +GPLEGR+GT  HMYKGTLFIYDESQE NSG+FC KSDLCE ITP KDS F KG
Sbjct: 441  DIIKVLEGPLEGRQGTACHMYKGTLFIYDESQEGNSGIFCTKSDLCEKITPAKDS-FGKG 499

Query: 181  GNKSSSSFNQSPVRSCEQEDSSHTF-RNRRSESNQPFSIGQTLRIRKGPLKGYLCRVVRI 357
             NK+SSSF+Q PV S EQEDSS TF RNRR ESNQ FS+GQTLRIRKGPLKGYLCRVVRI
Sbjct: 500  -NKASSSFSQDPVISSEQEDSSCTFSRNRRRESNQIFSVGQTLRIRKGPLKGYLCRVVRI 558

Query: 358  YRSDVTVKLDSLVKVITVEEQFLSIPNIKREFAAEMPSDIFGTQERLLGGLSGNGEQTVG 537
            YRSDVTVKLDSLVKVITV+EQ LS PN+KR+ A               GGLSGNGEQT+G
Sbjct: 559  YRSDVTVKLDSLVKVITVDEQLLSDPNLKRDTAG--------------GGLSGNGEQTLG 604

Query: 538  AGLWDGASSSWQVLSTSTL-FANNNVQKIEQEQGAD 642
            A  WDG SSSWQ LSTS   F+ NN QK  QEQGAD
Sbjct: 605  ASSWDGGSSSWQDLSTSAFSFSANNDQKSGQEQGAD 640


>gb|ONK75729.1| uncharacterized protein A4U43_C03F19930 [Asparagus officinalis]
          Length = 1710

 Score =  281 bits (720), Expect = 5e-84
 Identities = 155/215 (72%), Positives = 168/215 (78%), Gaps = 1/215 (0%)
 Frame = +1

Query: 1    DSVKVSDGPLEGREGTVRHMYKGTLFIYDESQEENSGLFCAKSDLCENITPPKDSSFRKG 180
            D +KV +GPLEGR+GT  HMYKGTLFIYDESQE NSG+FC KSDLCE ITP KDS F KG
Sbjct: 422  DIIKVLEGPLEGRQGTACHMYKGTLFIYDESQEGNSGIFCTKSDLCEKITPAKDS-FGKG 480

Query: 181  GNKSSSSFNQSPVRSCEQEDSSHTFRNRRSESNQPFSIGQTLRIRKGPLKGYLCRVVRIY 360
             NK+SSSF+Q PV S EQEDSS + RNRR ESNQ FS+GQTLRIRKGPLKGYLCRVVRIY
Sbjct: 481  -NKASSSFSQDPVISSEQEDSSFS-RNRRRESNQIFSVGQTLRIRKGPLKGYLCRVVRIY 538

Query: 361  RSDVTVKLDSLVKVITVEEQFLSIPNIKREFAAEMPSDIFGTQERLLGGLSGNGEQTVGA 540
            RSDVTVKLDSLVKVITV+EQ LS PN+KR+ A               GGLSGNGEQT+GA
Sbjct: 539  RSDVTVKLDSLVKVITVDEQLLSDPNLKRDTAG--------------GGLSGNGEQTLGA 584

Query: 541  GLWDGASSSWQVLSTSTL-FANNNVQKIEQEQGAD 642
              WDG SSSWQ LSTS   F+ NN QK  QEQGAD
Sbjct: 585  SSWDGGSSSWQDLSTSAFSFSANNDQKSGQEQGAD 619


>ref|XP_010933194.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X1 [Elaeis
            guineensis]
          Length = 2069

 Score =  219 bits (559), Expect = 2e-62
 Identities = 125/221 (56%), Positives = 154/221 (69%), Gaps = 7/221 (3%)
 Frame = +1

Query: 1    DSVKVSDGPLEGREGTVRHMYKGTLFIYDESQEENSGLFCAKSDLCENITPPKDSSFRKG 180
            D+VKV +GPL+ R+G VRHMYKGTLFIYDE++ ENSG FCAKS  CEN+   K       
Sbjct: 480  DTVKVLEGPLQDRQGIVRHMYKGTLFIYDENETENSGFFCAKSASCENLKELK------- 532

Query: 181  GNKSSSSFNQSPVRSCEQEDSSHTFR-NRRSESNQPFSIGQTLRIRKGPLKGYLCRVVRI 357
            G KSS SF Q P+RS E++D SH F  +R+S+ +Q FSIGQTLRIRKGPLKGYLCRVV +
Sbjct: 533  GEKSSHSFFQPPMRSSEEQDRSHGFNWHRQSDRDQIFSIGQTLRIRKGPLKGYLCRVVGV 592

Query: 358  YRSDVTVKLDSLVKVITVEEQFLSIPNIKREFAAEMPSDIFGTQERLLGGLSGNGEQTVG 537
            YRSDVTVKLDSLVKVITVE ++LS+PN+KR+ +A   S+ FGTQE    GLS  G Q V 
Sbjct: 593  YRSDVTVKLDSLVKVITVEAEYLSVPNVKRDDSAATTSNTFGTQE----GLSIAG-QHVD 647

Query: 538  AGLWDGA-----SSSWQVL-STSTLFANNNVQKIEQEQGAD 642
             G WD +       SWQ    +++   +NN  K ++   AD
Sbjct: 648  NGQWDASVPSFGRGSWQAFPGSNSSDVDNNDHKSDEGHDAD 688


>ref|XP_010933206.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X3 [Elaeis
            guineensis]
          Length = 2067

 Score =  219 bits (559), Expect = 2e-62
 Identities = 125/221 (56%), Positives = 154/221 (69%), Gaps = 7/221 (3%)
 Frame = +1

Query: 1    DSVKVSDGPLEGREGTVRHMYKGTLFIYDESQEENSGLFCAKSDLCENITPPKDSSFRKG 180
            D+VKV +GPL+ R+G VRHMYKGTLFIYDE++ ENSG FCAKS  CEN+   K       
Sbjct: 478  DTVKVLEGPLQDRQGIVRHMYKGTLFIYDENETENSGFFCAKSASCENLKELK------- 530

Query: 181  GNKSSSSFNQSPVRSCEQEDSSHTFR-NRRSESNQPFSIGQTLRIRKGPLKGYLCRVVRI 357
            G KSS SF Q P+RS E++D SH F  +R+S+ +Q FSIGQTLRIRKGPLKGYLCRVV +
Sbjct: 531  GEKSSHSFFQPPMRSSEEQDRSHGFNWHRQSDRDQIFSIGQTLRIRKGPLKGYLCRVVGV 590

Query: 358  YRSDVTVKLDSLVKVITVEEQFLSIPNIKREFAAEMPSDIFGTQERLLGGLSGNGEQTVG 537
            YRSDVTVKLDSLVKVITVE ++LS+PN+KR+ +A   S+ FGTQE    GLS  G Q V 
Sbjct: 591  YRSDVTVKLDSLVKVITVEAEYLSVPNVKRDDSAATTSNTFGTQE----GLSIAG-QHVD 645

Query: 538  AGLWDGA-----SSSWQVL-STSTLFANNNVQKIEQEQGAD 642
             G WD +       SWQ    +++   +NN  K ++   AD
Sbjct: 646  NGQWDASVPSFGRGSWQAFPGSNSSDVDNNDHKSDEGHDAD 686


>ref|XP_010933199.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X2 [Elaeis
            guineensis]
          Length = 2068

 Score =  219 bits (557), Expect = 4e-62
 Identities = 123/221 (55%), Positives = 152/221 (68%), Gaps = 7/221 (3%)
 Frame = +1

Query: 1    DSVKVSDGPLEGREGTVRHMYKGTLFIYDESQEENSGLFCAKSDLCENITPPKDSSFRKG 180
            D+VKV +GPL+ R+G VRHMYKGTLFIYDE++ ENSG FCAKS  CEN+   K       
Sbjct: 480  DTVKVLEGPLQDRQGIVRHMYKGTLFIYDENETENSGFFCAKSASCENLKELK------- 532

Query: 181  GNKSSSSFNQSPVRSCEQEDSSHTFR-NRRSESNQPFSIGQTLRIRKGPLKGYLCRVVRI 357
            G KSS SF Q P+RS E++D SH F  +R+S+ +Q FSIGQTLRIRKGPLKGYLCRVV +
Sbjct: 533  GEKSSHSFFQPPMRSSEEQDRSHGFNWHRQSDRDQIFSIGQTLRIRKGPLKGYLCRVVGV 592

Query: 358  YRSDVTVKLDSLVKVITVEEQFLSIPNIKREFAAEMPSDIFGTQERLLGGLSGNGEQTVG 537
            YRSDVTVKLDSLVKVITVE ++LS+PN+KR+ +A   S+ FGTQE L  G      Q V 
Sbjct: 593  YRSDVTVKLDSLVKVITVEAEYLSVPNVKRDDSAATTSNTFGTQEGLSIG------QHVD 646

Query: 538  AGLWDGA-----SSSWQVL-STSTLFANNNVQKIEQEQGAD 642
             G WD +       SWQ    +++   +NN  K ++   AD
Sbjct: 647  NGQWDASVPSFGRGSWQAFPGSNSSDVDNNDHKSDEGHDAD 687


>ref|XP_010933212.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X4 [Elaeis
            guineensis]
          Length = 2066

 Score =  219 bits (557), Expect = 4e-62
 Identities = 123/221 (55%), Positives = 152/221 (68%), Gaps = 7/221 (3%)
 Frame = +1

Query: 1    DSVKVSDGPLEGREGTVRHMYKGTLFIYDESQEENSGLFCAKSDLCENITPPKDSSFRKG 180
            D+VKV +GPL+ R+G VRHMYKGTLFIYDE++ ENSG FCAKS  CEN+   K       
Sbjct: 478  DTVKVLEGPLQDRQGIVRHMYKGTLFIYDENETENSGFFCAKSASCENLKELK------- 530

Query: 181  GNKSSSSFNQSPVRSCEQEDSSHTFR-NRRSESNQPFSIGQTLRIRKGPLKGYLCRVVRI 357
            G KSS SF Q P+RS E++D SH F  +R+S+ +Q FSIGQTLRIRKGPLKGYLCRVV +
Sbjct: 531  GEKSSHSFFQPPMRSSEEQDRSHGFNWHRQSDRDQIFSIGQTLRIRKGPLKGYLCRVVGV 590

Query: 358  YRSDVTVKLDSLVKVITVEEQFLSIPNIKREFAAEMPSDIFGTQERLLGGLSGNGEQTVG 537
            YRSDVTVKLDSLVKVITVE ++LS+PN+KR+ +A   S+ FGTQE L  G      Q V 
Sbjct: 591  YRSDVTVKLDSLVKVITVEAEYLSVPNVKRDDSAATTSNTFGTQEGLSIG------QHVD 644

Query: 538  AGLWDGA-----SSSWQVL-STSTLFANNNVQKIEQEQGAD 642
             G WD +       SWQ    +++   +NN  K ++   AD
Sbjct: 645  NGQWDASVPSFGRGSWQAFPGSNSSDVDNNDHKSDEGHDAD 685


>ref|XP_008794002.1| PREDICTED: protein RNA-directed DNA methylation 3 [Phoenix
            dactylifera]
          Length = 2039

 Score =  219 bits (557), Expect = 4e-62
 Identities = 120/217 (55%), Positives = 153/217 (70%), Gaps = 3/217 (1%)
 Frame = +1

Query: 1    DSVKVSDGPLEGREGTVRHMYKGTLFIYDESQEENSGLFCAKSDLCENITPPKDSSFRKG 180
            D+VKV +GPL+ ++G V+HMYKGTLFIYDE++ ENSG FCAKS  CEN+   K       
Sbjct: 476  DTVKVLEGPLQDKQGIVKHMYKGTLFIYDENETENSGFFCAKSASCENMKESK------- 528

Query: 181  GNKSSSSFNQSPVRSCEQEDSSHTFRNRR-SESNQPFSIGQTLRIRKGPLKGYLCRVVRI 357
            G KSS SF+Q+P+ S E++D SH F  RR +E +Q FSIGQTLRIRKGPLKGYLCRVV +
Sbjct: 529  GEKSSHSFSQAPMGSYEEQDRSHGFNWRRQTERDQVFSIGQTLRIRKGPLKGYLCRVVGV 588

Query: 358  YRSDVTVKLDSLVKVITVEEQFLSIPNIKREFAAEMPSDIFGTQERL-LGGLSGNGEQTV 534
            YRSDVTVK+DSLVK+ITVE ++LS+PN+KR+ +A   S+ FGTQERL +G  + NG+  V
Sbjct: 589  YRSDVTVKVDSLVKIITVEAEYLSVPNVKRDDSAATTSNPFGTQERLSIGQHAENGQWDV 648

Query: 535  GAGLWDGASSSWQVLSTSTLF-ANNNVQKIEQEQGAD 642
            G   +     SWQ    S     +NN  K ++   AD
Sbjct: 649  GVPSF--GRDSWQAFPASNFSDVDNNGHKADEGHDAD 683


>ref|XP_020587140.1| protein RNA-directed DNA methylation 3 [Phalaenopsis equestris]
          Length = 1960

 Score =  208 bits (529), Expect = 3e-58
 Identities = 111/197 (56%), Positives = 140/197 (71%), Gaps = 8/197 (4%)
 Frame = +1

Query: 1    DSVKVSDGPLEGREGTVRHMYKGTLFIYDESQEENSGLFCAKSDLCENITPPKDSSFRKG 180
            D VKVS+GPLEGREG V+HMYKG  FIYDE Q EN+G FCAKS++C+ +   +D    K 
Sbjct: 504  DVVKVSEGPLEGREGIVKHMYKGVFFIYDECQSENNGFFCAKSEICDLVKKSRDFGGGKL 563

Query: 181  GNKSSSSFNQSPVRSCEQEDSSHTF-RNRRSESNQPFSIGQTLRIRKGPLKGYLCRVVRI 357
             + +  SF QSP+RS EQ+D+S +F RN +S S   FS+GQTLRI KGPLKGYLCRV+RI
Sbjct: 564  SSNAGPSFAQSPIRSSEQDDNSQSFSRNHQSNSRGTFSVGQTLRICKGPLKGYLCRVIRI 623

Query: 358  YRSDVTVKLDSLVKVITVEEQFLSIPNIKREFAAEMPSDIFGTQ-ERLLGGL--SGNG-- 522
            YR+DVTVKLDSL K++TV+E+ LS PN KR+ A  M  D+FG+Q E+ +GGL  SG G  
Sbjct: 624  YRADVTVKLDSLGKLLTVDEKLLSFPNSKRDDATTMQCDMFGSQEEQPIGGLLDSGGGFG 683

Query: 523  --EQTVGAGLWDGASSS 567
                + G   W+  S S
Sbjct: 684  MDNSSFGRESWNTPSCS 700


>ref|XP_020682212.1| protein RNA-directed DNA methylation 3 [Dendrobium catenatum]
 gb|PKU72137.1| Putative transcription elongation factor SPT5 like 1 [Dendrobium
            catenatum]
          Length = 1946

 Score =  202 bits (513), Expect = 4e-56
 Identities = 113/223 (50%), Positives = 144/223 (64%), Gaps = 9/223 (4%)
 Frame = +1

Query: 1    DSVKVSDGPLEGREGTVRHMYKGTLFIYDESQEENSGLFCAKSDLCENITPPKDSSFRKG 180
            D VKV +GPLEGREG VRHMYKG LFIYDE Q EN+G FCA S +C+ +   +D    K 
Sbjct: 503  DVVKVFEGPLEGREGIVRHMYKGVLFIYDECQSENNGFFCANSGICDLVKKSRDLGGGKL 562

Query: 181  GNKSSSSFNQSPVRSCEQEDSSHTF-RNRRSESNQPFSIGQTLRIRKGPLKGYLCRVVRI 357
              ++  SF QSP+R  EQ+D+S +F RN++S S   FS+GQTLRIRKGPLKGYLCRV+R+
Sbjct: 563  STRAGPSFAQSPIRLSEQDDNSQSFSRNQQSNSLGTFSVGQTLRIRKGPLKGYLCRVIRM 622

Query: 358  YRSDVTVKLDSLVKVITVEEQFLSIPNIKREFAAEMPSDIFGTQERL-------LGGLSG 516
             R+D+TVKLDSL K++TV+E+ LS+PN KR+ A  M  ++FG+QE          GG  G
Sbjct: 623  RRADITVKLDSLGKLLTVDEKLLSLPNSKRDDATAMQCNMFGSQEDQSTDGLLDAGGGLG 682

Query: 517  NGEQTVGAGLWDGASSSWQVLSTSTL-FANNNVQKIEQEQGAD 642
                   AG+      SW   S S+  F   N  K +Q Q AD
Sbjct: 683  MDNFEFNAGMSSFGRDSWNTASCSSFSFPRENDSK-DQNQIAD 724


>gb|OAY66311.1| Protein RNA-directed DNA methylation 3 [Ananas comosus]
          Length = 1701

 Score =  196 bits (499), Expect = 3e-54
 Identities = 116/236 (49%), Positives = 150/236 (63%), Gaps = 22/236 (9%)
 Frame = +1

Query: 1    DSVKVSDGPLEGREGTVRHMYKGTLFIYDESQEENSGLFCAKSDLCENITPPKDS--SFR 174
            D VKV +G LEGR+G V+H+Y+G++FIYDE++ ENSG FCAKS+ CE I   ++S  SF 
Sbjct: 472  DIVKVLEGSLEGRQGIVKHLYRGSIFIYDENETENSGFFCAKSESCEKIKKSRESVNSFD 531

Query: 175  KG-GNKSSSSFNQSPVRSCEQEDSSH-TFRNRRSESNQPFSIGQTLRIRKGPLKGYLCRV 348
               G+ S+S F++ P  S E +DSS    R R+ + +  FSIGQTLRI KGPLKGYLCRV
Sbjct: 532  DNLGDGSASLFSEPPTISFENQDSSSGAGRRRQYDRDSLFSIGQTLRICKGPLKGYLCRV 591

Query: 349  VRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKREFAAEMPSDIFGTQER-LLGGLSGNG- 522
            VRI+RS+VTVKLDSLVK+ITV+ +FLS+P  KR+ +    SD+FGTQE   +G  S +G 
Sbjct: 592  VRIFRSEVTVKLDSLVKIITVDAKFLSVPTRKRDDSTGAASDLFGTQEMPSIGPFSADGT 651

Query: 523  EQTVGAGLWDG-----ASSSWQVLSTSTLFANNNV-----------QKIEQEQGAD 642
            E   G   WD       S  WQ  S S L A  N             K++ +Q AD
Sbjct: 652  ESQPGRSSWDSPLPSFGSDGWQPFSASKLSAAGNTDNKTDDVDPWGSKVKSDQSAD 707


>ref|XP_020091605.1| protein RNA-directed DNA methylation 3 isoform X3 [Ananas comosus]
          Length = 1714

 Score =  196 bits (499), Expect = 3e-54
 Identities = 116/236 (49%), Positives = 150/236 (63%), Gaps = 22/236 (9%)
 Frame = +1

Query: 1    DSVKVSDGPLEGREGTVRHMYKGTLFIYDESQEENSGLFCAKSDLCENITPPKDS--SFR 174
            D VKV +G LEGR+G V+H+Y+G++FIYDE++ ENSG FCAKS+ CE I   ++S  SF 
Sbjct: 475  DIVKVLEGSLEGRQGIVKHLYRGSIFIYDENETENSGFFCAKSESCEKIKKSRESVNSFD 534

Query: 175  KG-GNKSSSSFNQSPVRSCEQEDSSH-TFRNRRSESNQPFSIGQTLRIRKGPLKGYLCRV 348
               G+ S+S F++ P  S E +DSS    R R+ + +  FSIGQTLRI KGPLKGYLCRV
Sbjct: 535  DNLGDGSASLFSEPPTISFENQDSSSGAGRRRQYDRDSLFSIGQTLRICKGPLKGYLCRV 594

Query: 349  VRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKREFAAEMPSDIFGTQER-LLGGLSGNG- 522
            VRI+RS+VTVKLDSLVK+ITV+ +FLS+P  KR+ +    SD+FGTQE   +G  S +G 
Sbjct: 595  VRIFRSEVTVKLDSLVKIITVDAKFLSVPTRKRDDSTGAASDLFGTQEMPSIGPFSADGT 654

Query: 523  EQTVGAGLWDG-----ASSSWQVLSTSTLFANNNV-----------QKIEQEQGAD 642
            E   G   WD       S  WQ  S S L A  N             K++ +Q AD
Sbjct: 655  ESQPGRSSWDSPLPSFGSDGWQPFSASKLSAAGNTDNKTDDVDPWGSKVKSDQSAD 710


>ref|XP_020091607.1| protein RNA-directed DNA methylation 3 isoform X5 [Ananas comosus]
          Length = 1429

 Score =  196 bits (498), Expect = 4e-54
 Identities = 116/237 (48%), Positives = 150/237 (63%), Gaps = 23/237 (9%)
 Frame = +1

Query: 1   DSVKVSDGPLEGREGTVRHMYKGTLFIYDESQEENSGLFCAKSDLCENITPPKDS--SFR 174
           D VKV +G LEGR+G V+H+Y+G++FIYDE++ ENSG FCAKS+ CE I   ++S  SF 
Sbjct: 189 DIVKVLEGSLEGRQGIVKHLYRGSIFIYDENETENSGFFCAKSESCEKIKKSRESVNSFD 248

Query: 175 KG--GNKSSSSFNQSPVRSCEQEDSSH-TFRNRRSESNQPFSIGQTLRIRKGPLKGYLCR 345
               G+ S+S F++ P  S E +DSS    R R+ + +  FSIGQTLRI KGPLKGYLCR
Sbjct: 249 DNLQGDGSASLFSEPPTISFENQDSSSGAGRRRQYDRDSLFSIGQTLRICKGPLKGYLCR 308

Query: 346 VVRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKREFAAEMPSDIFGTQER-LLGGLSGNG 522
           VVRI+RS+VTVKLDSLVK+ITV+ +FLS+P  KR+ +    SD+FGTQE   +G  S +G
Sbjct: 309 VVRIFRSEVTVKLDSLVKIITVDAKFLSVPTRKRDDSTGAASDLFGTQEMPSIGPFSADG 368

Query: 523 -EQTVGAGLWDG-----ASSSWQVLSTSTLFANNNV-----------QKIEQEQGAD 642
            E   G   WD       S  WQ  S S L A  N             K++ +Q AD
Sbjct: 369 TESQPGRSSWDSPLPSFGSDGWQPFSASKLSAAGNTDNKTDDVDPWGSKVKSDQSAD 425


>ref|XP_020091606.1| protein RNA-directed DNA methylation 3 isoform X4 [Ananas comosus]
          Length = 1705

 Score =  196 bits (498), Expect = 4e-54
 Identities = 116/237 (48%), Positives = 150/237 (63%), Gaps = 23/237 (9%)
 Frame = +1

Query: 1    DSVKVSDGPLEGREGTVRHMYKGTLFIYDESQEENSGLFCAKSDLCENITPPKDS--SFR 174
            D VKV +G LEGR+G V+H+Y+G++FIYDE++ ENSG FCAKS+ CE I   ++S  SF 
Sbjct: 475  DIVKVLEGSLEGRQGIVKHLYRGSIFIYDENETENSGFFCAKSESCEKIKKSRESVNSFD 534

Query: 175  KG--GNKSSSSFNQSPVRSCEQEDSSH-TFRNRRSESNQPFSIGQTLRIRKGPLKGYLCR 345
                G+ S+S F++ P  S E +DSS    R R+ + +  FSIGQTLRI KGPLKGYLCR
Sbjct: 535  DNLQGDGSASLFSEPPTISFENQDSSSGAGRRRQYDRDSLFSIGQTLRICKGPLKGYLCR 594

Query: 346  VVRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKREFAAEMPSDIFGTQER-LLGGLSGNG 522
            VVRI+RS+VTVKLDSLVK+ITV+ +FLS+P  KR+ +    SD+FGTQE   +G  S +G
Sbjct: 595  VVRIFRSEVTVKLDSLVKIITVDAKFLSVPTRKRDDSTGAASDLFGTQEMPSIGPFSADG 654

Query: 523  -EQTVGAGLWDG-----ASSSWQVLSTSTLFANNNV-----------QKIEQEQGAD 642
             E   G   WD       S  WQ  S S L A  N             K++ +Q AD
Sbjct: 655  TESQPGRSSWDSPLPSFGSDGWQPFSASKLSAAGNTDNKTDDVDPWGSKVKSDQSAD 711


>ref|XP_020091604.1| protein RNA-directed DNA methylation 3 isoform X2 [Ananas comosus]
          Length = 1714

 Score =  196 bits (498), Expect = 4e-54
 Identities = 116/237 (48%), Positives = 150/237 (63%), Gaps = 23/237 (9%)
 Frame = +1

Query: 1    DSVKVSDGPLEGREGTVRHMYKGTLFIYDESQEENSGLFCAKSDLCENITPPKDS--SFR 174
            D VKV +G LEGR+G V+H+Y+G++FIYDE++ ENSG FCAKS+ CE I   ++S  SF 
Sbjct: 475  DIVKVLEGSLEGRQGIVKHLYRGSIFIYDENETENSGFFCAKSESCEKIKKSRESVNSFD 534

Query: 175  KG--GNKSSSSFNQSPVRSCEQEDSSH-TFRNRRSESNQPFSIGQTLRIRKGPLKGYLCR 345
                G+ S+S F++ P  S E +DSS    R R+ + +  FSIGQTLRI KGPLKGYLCR
Sbjct: 535  DNLQGDGSASLFSEPPTISFENQDSSSGAGRRRQYDRDSLFSIGQTLRICKGPLKGYLCR 594

Query: 346  VVRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKREFAAEMPSDIFGTQER-LLGGLSGNG 522
            VVRI+RS+VTVKLDSLVK+ITV+ +FLS+P  KR+ +    SD+FGTQE   +G  S +G
Sbjct: 595  VVRIFRSEVTVKLDSLVKIITVDAKFLSVPTRKRDDSTGAASDLFGTQEMPSIGPFSADG 654

Query: 523  -EQTVGAGLWDG-----ASSSWQVLSTSTLFANNNV-----------QKIEQEQGAD 642
             E   G   WD       S  WQ  S S L A  N             K++ +Q AD
Sbjct: 655  TESQPGRSSWDSPLPSFGSDGWQPFSASKLSAAGNTDNKTDDVDPWGSKVKSDQSAD 711


>ref|XP_020091602.1| protein RNA-directed DNA methylation 3 isoform X1 [Ananas comosus]
          Length = 1715

 Score =  196 bits (498), Expect = 4e-54
 Identities = 116/237 (48%), Positives = 150/237 (63%), Gaps = 23/237 (9%)
 Frame = +1

Query: 1    DSVKVSDGPLEGREGTVRHMYKGTLFIYDESQEENSGLFCAKSDLCENITPPKDS--SFR 174
            D VKV +G LEGR+G V+H+Y+G++FIYDE++ ENSG FCAKS+ CE I   ++S  SF 
Sbjct: 475  DIVKVLEGSLEGRQGIVKHLYRGSIFIYDENETENSGFFCAKSESCEKIKKSRESVNSFD 534

Query: 175  KG--GNKSSSSFNQSPVRSCEQEDSSH-TFRNRRSESNQPFSIGQTLRIRKGPLKGYLCR 345
                G+ S+S F++ P  S E +DSS    R R+ + +  FSIGQTLRI KGPLKGYLCR
Sbjct: 535  DNLQGDGSASLFSEPPTISFENQDSSSGAGRRRQYDRDSLFSIGQTLRICKGPLKGYLCR 594

Query: 346  VVRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKREFAAEMPSDIFGTQER-LLGGLSGNG 522
            VVRI+RS+VTVKLDSLVK+ITV+ +FLS+P  KR+ +    SD+FGTQE   +G  S +G
Sbjct: 595  VVRIFRSEVTVKLDSLVKIITVDAKFLSVPTRKRDDSTGAASDLFGTQEMPSIGPFSADG 654

Query: 523  -EQTVGAGLWDG-----ASSSWQVLSTSTLFANNNV-----------QKIEQEQGAD 642
             E   G   WD       S  WQ  S S L A  N             K++ +Q AD
Sbjct: 655  TESQPGRSSWDSPLPSFGSDGWQPFSASKLSAAGNTDNKTDDVDPWGSKVKSDQSAD 711


>ref|XP_009409884.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X2 [Musa
            acuminata subsp. malaccensis]
          Length = 1808

 Score =  176 bits (446), Expect = 4e-47
 Identities = 109/231 (47%), Positives = 147/231 (63%), Gaps = 17/231 (7%)
 Frame = +1

Query: 1    DSVKVSDGPLEGREGTVRHMYKGTLFIYDESQEENSGLFCAKSDLCENITPPKDSSFRKG 180
            D VK+  GPL+GREG V+HMYKGTLFI+ E + +NSG F  KS  CE +   K+S   K 
Sbjct: 474  DIVKILAGPLQGREGVVKHMYKGTLFIHAEYETKNSGFFSVKSVSCEKVKESKNSYGVKA 533

Query: 181  GN--KSSSSFNQSPVRSCEQEDSSH-TFRNRRSESNQPFSIGQTLRIRKGPLKGYLCRVV 351
            G   ++++SF+QSP+R+ ++E+++H + R  +S++ Q FSIGQTLRIR+GPLKGYLCRVV
Sbjct: 534  GKGKEANTSFSQSPIRTFDRENNAHGSTRRGQSDNEQMFSIGQTLRIREGPLKGYLCRVV 593

Query: 352  RIYRSDVTVKLDSLVKVITVEEQFLSIPNIKREFA------AEMPSDIFGTQERLLGGLS 513
             IYRSDVTVKLDSLVK+ITV+++ L++P IK + A      A + SD FG    L     
Sbjct: 594  GIYRSDVTVKLDSLVKLITVKDKSLAVPKIKGDNATGSSDQATISSDHFG----LSTACP 649

Query: 514  GNGEQTVGA--GLWDG-----ASSSWQVLSTS-TLFANNNVQKIEQEQGAD 642
              GE +  A    WD         SWQ  S+S +  A NN  + +    AD
Sbjct: 650  SFGETSTPAEKSSWDSVMPSFGRDSWQPFSSSNSSVACNNENQTDHGNEAD 700


>ref|XP_009409883.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X1 [Musa
            acuminata subsp. malaccensis]
          Length = 1809

 Score =  176 bits (446), Expect = 4e-47
 Identities = 109/231 (47%), Positives = 147/231 (63%), Gaps = 17/231 (7%)
 Frame = +1

Query: 1    DSVKVSDGPLEGREGTVRHMYKGTLFIYDESQEENSGLFCAKSDLCENITPPKDSSFRKG 180
            D VK+  GPL+GREG V+HMYKGTLFI+ E + +NSG F  KS  CE +   K+S   K 
Sbjct: 475  DIVKILAGPLQGREGVVKHMYKGTLFIHAEYETKNSGFFSVKSVSCEKVKESKNSYGVKA 534

Query: 181  GN--KSSSSFNQSPVRSCEQEDSSH-TFRNRRSESNQPFSIGQTLRIRKGPLKGYLCRVV 351
            G   ++++SF+QSP+R+ ++E+++H + R  +S++ Q FSIGQTLRIR+GPLKGYLCRVV
Sbjct: 535  GKGKEANTSFSQSPIRTFDRENNAHGSTRRGQSDNEQMFSIGQTLRIREGPLKGYLCRVV 594

Query: 352  RIYRSDVTVKLDSLVKVITVEEQFLSIPNIKREFA------AEMPSDIFGTQERLLGGLS 513
             IYRSDVTVKLDSLVK+ITV+++ L++P IK + A      A + SD FG    L     
Sbjct: 595  GIYRSDVTVKLDSLVKLITVKDKSLAVPKIKGDNATGSSDQATISSDHFG----LSTACP 650

Query: 514  GNGEQTVGA--GLWDG-----ASSSWQVLSTS-TLFANNNVQKIEQEQGAD 642
              GE +  A    WD         SWQ  S+S +  A NN  + +    AD
Sbjct: 651  SFGETSTPAEKSSWDSVMPSFGRDSWQPFSSSNSSVACNNENQTDHGNEAD 701


>gb|EMS65052.1| hypothetical protein TRIUR3_18947 [Triticum urartu]
          Length = 1631

 Score =  174 bits (442), Expect = 1e-46
 Identities = 91/202 (45%), Positives = 128/202 (63%)
 Frame = +1

Query: 1    DSVKVSDGPLEGREGTVRHMYKGTLFIYDESQEENSGLFCAKSDLCENITPPKDSSFRKG 180
            D+VKV +GP++G++G V+H+Y G LFIYDES+ ENSG FCA+   CEN+   +D +    
Sbjct: 594  DTVKVLEGPVQGKQGVVKHLYMGILFIYDESESENSGFFCAQCGSCENVKKRRDVT---- 649

Query: 181  GNKSSSSFNQSPVRSCEQEDSSHTFRNRRSESNQPFSIGQTLRIRKGPLKGYLCRVVRIY 360
             N  +  F++S   S EQ +  +  R  R+   Q F +G+ LR R+GPLKGYLCRVVRI+
Sbjct: 650  -NSDNPMFSESAFISSEQNEQRNNERPYRAPREQLFQVGEVLRFRRGPLKGYLCRVVRIF 708

Query: 361  RSDVTVKLDSLVKVITVEEQFLSIPNIKREFAAEMPSDIFGTQERLLGGLSGNGEQTVGA 540
            R+DVTVKLDSL+K++TV+ +FLS+P  + + ++  PS  FGTQ+      +        A
Sbjct: 709  RNDVTVKLDSLLKIVTVQAEFLSVPTKRGDNSSSAPSGNFGTQDTPFTEAAKTSWDNGFA 768

Query: 541  GLWDGASSSWQVLSTSTLFANN 606
             L    S SWQ  S+S L A N
Sbjct: 769  SL---GSDSWQPFSSSALPAQN 787


>ref|XP_004961584.1| protein RNA-directed DNA methylation 3 [Setaria italica]
          Length = 1702

 Score =  174 bits (441), Expect = 2e-46
 Identities = 95/202 (47%), Positives = 131/202 (64%)
 Frame = +1

Query: 1    DSVKVSDGPLEGREGTVRHMYKGTLFIYDESQEENSGLFCAKSDLCENITPPKDSSFRKG 180
            D+V V +GP +G++G V+H+Y GTLFIY+ES+ EN G FCA+   CEN+   K+SS  + 
Sbjct: 507  DTVNVLEGPFQGKQGVVKHLYMGTLFIYNESESENCGFFCAQCGSCENVKKRKESSTTEN 566

Query: 181  GNKSSSSFNQSPVRSCEQEDSSHTFRNRRSESNQPFSIGQTLRIRKGPLKGYLCRVVRIY 360
             +     F++      EQ +   T R  RS   Q FSIGQ LRIRKGPLKGYLCRVV+I+
Sbjct: 567  LDNPIPMFSEP----YEQNEHRDTERPYRSTREQLFSIGQMLRIRKGPLKGYLCRVVKIF 622

Query: 361  RSDVTVKLDSLVKVITVEEQFLSIPNIKREFAAEMPSDIFGTQERLLGGLSGNGEQTVGA 540
            R+DVTVKLDSL+K++TV+ +FLS+P  + + ++  P+  FG+Q+    G S   + +   
Sbjct: 623  RNDVTVKLDSLLKIVTVQAEFLSVPANRGDNSSGAPAGNFGSQDTSFFG-SEADKASWDN 681

Query: 541  GLWDGASSSWQVLSTSTLFANN 606
            GL    S SWQ  S+STL A N
Sbjct: 682  GLPSFGSDSWQPFSSSTLPAQN 703


>gb|AQK94723.1| Protein RNA-directed DNA methylation 3, partial [Zea mays]
          Length = 624

 Score =  169 bits (429), Expect = 1e-45
 Identities = 95/202 (47%), Positives = 126/202 (62%)
 Frame = +1

Query: 1   DSVKVSDGPLEGREGTVRHMYKGTLFIYDESQEENSGLFCAKSDLCENITPPKDSSFRKG 180
           D+V V +GP +G++G V+H+Y G LFIY+ES+ EN G FCA+S  CE I     SS  + 
Sbjct: 16  DTVNVVEGPFQGKQGVVKHLYLGILFIYNESESENCGFFCAQSGSCEKIRKGLGSSTTES 75

Query: 181 GNKSSSSFNQSPVRSCEQEDSSHTFRNRRSESNQPFSIGQTLRIRKGPLKGYLCRVVRIY 360
            + ++  F   P  + EQ     T R  RS   Q FSIGQ LRIRKGPLKGYLCRVVRI+
Sbjct: 76  SDFTTPMF---PEPAYEQNGHRDTERPYRSTREQLFSIGQMLRIRKGPLKGYLCRVVRIF 132

Query: 361 RSDVTVKLDSLVKVITVEEQFLSIPNIKREFAAEMPSDIFGTQERLLGGLSGNGEQTVGA 540
           R+DVTVKLDSL+K++TV+   LS+P  + +  +  P+  FG+Q+    G S  G+ +   
Sbjct: 133 RNDVTVKLDSLLKIVTVQADLLSVPANRGDNLSGAPASKFGSQDTSFFG-SEAGKTSWDN 191

Query: 541 GLWDGASSSWQVLSTSTLFANN 606
           GL    S SWQ  S+STL   N
Sbjct: 192 GLPSFGSDSWQPFSSSTLSVQN 213