BLASTX nr result

ID: Ophiopogon25_contig00016709 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00016709
         (485 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS47727.1| putative potassium transporter 17 [Triticum urartu]     59   3e-07

>gb|EMS47727.1| putative potassium transporter 17 [Triticum urartu]
          Length = 682

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/66 (46%), Positives = 36/66 (54%), Gaps = 24/66 (36%)
 Frame = +2

Query: 359 VLVLSAIDGLREPFPSVGKR------------------------LWTLTTPMIGVYSFLR 466
           + VLSAIDGLR PFPSV KR                         WT TTP++G+YS +R
Sbjct: 162 ISVLSAIDGLRGPFPSVSKRSCCGSSICSNSYWLILSAKIWDFKTWTFTTPIVGIYSIVR 221

Query: 467 YYPGIF 484
           YYPGIF
Sbjct: 222 YYPGIF 227


Top