BLASTX nr result
ID: Ophiopogon25_contig00016624
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00016624
(1474 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK70315.1| uncharacterized protein A4U43_C05F32460 [Asparagu... 461 e-157
ref|XP_020265573.1| DNA-directed RNA polymerases II, IV and V su... 458 e-157
ref|XP_020673703.1| DNA-directed RNA polymerases II, IV and V su... 421 e-142
ref|XP_009418294.1| PREDICTED: DNA-directed RNA polymerases II, ... 420 e-142
ref|XP_010943195.1| PREDICTED: DNA-directed RNA polymerases II, ... 419 e-142
ref|XP_020593275.1| DNA-directed RNA polymerases II, IV and V su... 418 e-141
ref|XP_020109766.1| DNA-directed RNA polymerases II, IV and V su... 417 e-141
gb|OAY65904.1| DNA-directed RNA polymerases II, IV and V subunit... 417 e-140
ref|XP_010241296.1| PREDICTED: DNA-directed RNA polymerases II, ... 413 e-139
ref|XP_010275045.1| PREDICTED: DNA-directed RNA polymerases II, ... 412 e-139
gb|PKA55547.1| DNA-directed RNA polymerase II subunit RPB3-A [Ap... 410 e-138
ref|XP_006853170.1| DNA-directed RNA polymerases II, IV and V su... 406 e-136
gb|OVA02066.1| DNA-directed RNA polymerase [Macleaya cordata] 406 e-135
gb|PIA27129.1| hypothetical protein AQUCO_08300072v1 [Aquilegia ... 400 e-134
ref|XP_022726703.1| DNA-directed RNA polymerases II, IV and V su... 397 e-133
ref|XP_002518700.1| PREDICTED: DNA-directed RNA polymerases II, ... 397 e-133
ref|XP_006422955.1| DNA-directed RNA polymerases II, IV and V su... 396 e-133
ref|XP_007042502.1| PREDICTED: DNA-directed RNA polymerases II, ... 394 e-132
gb|PIA27130.1| hypothetical protein AQUCO_08300072v1 [Aquilegia ... 394 e-132
ref|XP_003576823.1| PREDICTED: DNA-directed RNA polymerases II, ... 391 e-131
>gb|ONK70315.1| uncharacterized protein A4U43_C05F32460 [Asparagus officinalis]
Length = 373
Score = 461 bits (1185), Expect = e-157
Identities = 234/259 (90%), Positives = 243/259 (93%)
Frame = -3
Query: 779 PSSMETAVSYQRFPKVRIREMKDDYCKFELRETDASMANALRRVMIAEVPTVAIDLVEID 600
P +MET VSYQRFPKVRIREMKD+YCKFELRETDASMANALRRVMIAEVPTVAIDLVEI+
Sbjct: 49 PPAMETTVSYQRFPKVRIREMKDEYCKFELRETDASMANALRRVMIAEVPTVAIDLVEIE 108
Query: 599 TNSSVLNDEFIAHRLGLIPLTSDDAMRMRFSRDCDSCDGDGQCEFCSVEFHLNVRCDSDQ 420
NSSVLNDEFIAHRLGLIPLTSD+AMRMRFSRDCDSCDGDGQCEFCSVEFHLNV CDSDQ
Sbjct: 109 VNSSVLNDEFIAHRLGLIPLTSDNAMRMRFSRDCDSCDGDGQCEFCSVEFHLNVCCDSDQ 168
Query: 419 TLDVTSADLRSTEPRVIPVDVAAKALAITADSTSYELSEAAEQRGIIIVKLRRGQELRLR 240
TLDVTSADLRS E VIPVD+A KALA+ + STSY EAAEQRGIIIVKLRRGQELRLR
Sbjct: 169 TLDVTSADLRSAEASVIPVDLAVKALAMESSSTSY---EAAEQRGIIIVKLRRGQELRLR 225
Query: 239 AIARKGIGKDHAKWSPAATVTFMYEADIHINEDLMETLSLEEKRAWIESSPTRVFDLDEN 60
AIARKGIGKDHAKWSPAATVTFMYE DIHINEDLMETLSL+EKRAWIESSPT+VFDLD N
Sbjct: 226 AIARKGIGKDHAKWSPAATVTFMYEPDIHINEDLMETLSLDEKRAWIESSPTKVFDLDPN 285
Query: 59 TGQVVVVDREAYTYDDEVI 3
TGQVVVVD EAYTYDDEVI
Sbjct: 286 TGQVVVVDPEAYTYDDEVI 304
>ref|XP_020265573.1| DNA-directed RNA polymerases II, IV and V subunit 3-like [Asparagus
officinalis]
Length = 322
Score = 458 bits (1178), Expect = e-157
Identities = 233/256 (91%), Positives = 241/256 (94%)
Frame = -3
Query: 770 METAVSYQRFPKVRIREMKDDYCKFELRETDASMANALRRVMIAEVPTVAIDLVEIDTNS 591
MET VSYQRFPKVRIREMKD+YCKFELRETDASMANALRRVMIAEVPTVAIDLVEI+ NS
Sbjct: 1 METTVSYQRFPKVRIREMKDEYCKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNS 60
Query: 590 SVLNDEFIAHRLGLIPLTSDDAMRMRFSRDCDSCDGDGQCEFCSVEFHLNVRCDSDQTLD 411
SVLNDEFIAHRLGLIPLTSD+AMRMRFSRDCDSCDGDGQCEFCSVEFHLNV CDSDQTLD
Sbjct: 61 SVLNDEFIAHRLGLIPLTSDNAMRMRFSRDCDSCDGDGQCEFCSVEFHLNVCCDSDQTLD 120
Query: 410 VTSADLRSTEPRVIPVDVAAKALAITADSTSYELSEAAEQRGIIIVKLRRGQELRLRAIA 231
VTSADLRS E VIPVD+A KALA+ + STSY EAAEQRGIIIVKLRRGQELRLRAIA
Sbjct: 121 VTSADLRSAEASVIPVDLAVKALAMESSSTSY---EAAEQRGIIIVKLRRGQELRLRAIA 177
Query: 230 RKGIGKDHAKWSPAATVTFMYEADIHINEDLMETLSLEEKRAWIESSPTRVFDLDENTGQ 51
RKGIGKDHAKWSPAATVTFMYE DIHINEDLMETLSL+EKRAWIESSPT+VFDLD NTGQ
Sbjct: 178 RKGIGKDHAKWSPAATVTFMYEPDIHINEDLMETLSLDEKRAWIESSPTKVFDLDPNTGQ 237
Query: 50 VVVVDREAYTYDDEVI 3
VVVVD EAYTYDDEVI
Sbjct: 238 VVVVDPEAYTYDDEVI 253
>ref|XP_020673703.1| DNA-directed RNA polymerases II, IV and V subunit 3-like
[Dendrobium catenatum]
Length = 322
Score = 421 bits (1081), Expect = e-142
Identities = 212/252 (84%), Positives = 232/252 (92%)
Frame = -3
Query: 758 VSYQRFPKVRIREMKDDYCKFELRETDASMANALRRVMIAEVPTVAIDLVEIDTNSSVLN 579
VSYQRFPKV+IREMKDDY KFELRETDASMANALRRVMIAEVPT+AIDLVEI+ NSSVLN
Sbjct: 4 VSYQRFPKVKIREMKDDYMKFELRETDASMANALRRVMIAEVPTIAIDLVEIEANSSVLN 63
Query: 578 DEFIAHRLGLIPLTSDDAMRMRFSRDCDSCDGDGQCEFCSVEFHLNVRCDSDQTLDVTSA 399
DEFIAHRLGLIPL SDDAM MRFSRDCD+CDGDGQCE+CSVEFHLNVRCDSDQTLDVTS
Sbjct: 64 DEFIAHRLGLIPLVSDDAMGMRFSRDCDACDGDGQCEYCSVEFHLNVRCDSDQTLDVTSN 123
Query: 398 DLRSTEPRVIPVDVAAKALAITADSTSYELSEAAEQRGIIIVKLRRGQELRLRAIARKGI 219
DLRSTEPRVIPVDVA ++LA ++S + ++ +QRGIIIVKLRRGQELRLRAIARKGI
Sbjct: 124 DLRSTEPRVIPVDVATRSLA--SESGGF---DSPDQRGIIIVKLRRGQELRLRAIARKGI 178
Query: 218 GKDHAKWSPAATVTFMYEADIHINEDLMETLSLEEKRAWIESSPTRVFDLDENTGQVVVV 39
GKDHAKWSPAATVTFMYE +IHINE+LMETL+L+EKR WIESSPT+VFD+D NT QV VV
Sbjct: 179 GKDHAKWSPAATVTFMYEPEIHINEELMETLTLDEKRTWIESSPTKVFDIDPNTYQVRVV 238
Query: 38 DREAYTYDDEVI 3
D EAYTYD+EVI
Sbjct: 239 DPEAYTYDEEVI 250
>ref|XP_009418294.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
[Musa acuminata subsp. malaccensis]
Length = 330
Score = 420 bits (1079), Expect = e-142
Identities = 209/251 (83%), Positives = 229/251 (91%)
Frame = -3
Query: 755 SYQRFPKVRIREMKDDYCKFELRETDASMANALRRVMIAEVPTVAIDLVEIDTNSSVLND 576
SYQR+P+VRIREMKDDY KFELR+TDASMANALRRVM+AEVPT+AIDLVEI+ NSSVLND
Sbjct: 15 SYQRYPRVRIREMKDDYLKFELRDTDASMANALRRVMLAEVPTIAIDLVEIEVNSSVLND 74
Query: 575 EFIAHRLGLIPLTSDDAMRMRFSRDCDSCDGDGQCEFCSVEFHLNVRCDSDQTLDVTSAD 396
EFIAHRLGLIPLTSDDAM MRFSRDCD+CDGDGQCEFCSVEF L+VRCDSDQTLDVTSAD
Sbjct: 75 EFIAHRLGLIPLTSDDAMSMRFSRDCDACDGDGQCEFCSVEFFLSVRCDSDQTLDVTSAD 134
Query: 395 LRSTEPRVIPVDVAAKALAITADSTSYELSEAAEQRGIIIVKLRRGQELRLRAIARKGIG 216
L+ST PRV PVDVAA AL+ AD E+AEQ+GIIIVKLRRGQELRLRAIARKGIG
Sbjct: 135 LQSTNPRVCPVDVAANALSSAADG-----YESAEQKGIIIVKLRRGQELRLRAIARKGIG 189
Query: 215 KDHAKWSPAATVTFMYEADIHINEDLMETLSLEEKRAWIESSPTRVFDLDENTGQVVVVD 36
KDHAKWSPAATVTFMYE IHINEDLMETL+LE+KR+W+ESSPT+VF +D NT Q+VV+D
Sbjct: 190 KDHAKWSPAATVTFMYEPQIHINEDLMETLTLEDKRSWVESSPTKVFGIDPNTQQLVVID 249
Query: 35 REAYTYDDEVI 3
EAYTYDDEVI
Sbjct: 250 AEAYTYDDEVI 260
>ref|XP_010943195.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
[Elaeis guineensis]
Length = 323
Score = 419 bits (1078), Expect = e-142
Identities = 211/256 (82%), Positives = 232/256 (90%)
Frame = -3
Query: 770 METAVSYQRFPKVRIREMKDDYCKFELRETDASMANALRRVMIAEVPTVAIDLVEIDTNS 591
M VSYQRFPKVRIRE+KDDY KFELRETDAS+ANALRRVM+AEVPT+AIDLVEI+ NS
Sbjct: 1 MAERVSYQRFPKVRIRELKDDYVKFELRETDASIANALRRVMLAEVPTLAIDLVEIEVNS 60
Query: 590 SVLNDEFIAHRLGLIPLTSDDAMRMRFSRDCDSCDGDGQCEFCSVEFHLNVRCDSDQTLD 411
SVLNDEFIAHRLGLIPLTSDDAM MRFSRDCDSCDGDGQC++CSVEFHLNVRCDSDQTLD
Sbjct: 61 SVLNDEFIAHRLGLIPLTSDDAMGMRFSRDCDSCDGDGQCDYCSVEFHLNVRCDSDQTLD 120
Query: 410 VTSADLRSTEPRVIPVDVAAKALAITADSTSYELSEAAEQRGIIIVKLRRGQELRLRAIA 231
VTSADLRST P V PVDVA + LA +AD S+ ++++QRGI+IVKLRRGQELRLRAIA
Sbjct: 121 VTSADLRSTSPTVCPVDVAHRVLA-SADPNSF---DSSDQRGILIVKLRRGQELRLRAIA 176
Query: 230 RKGIGKDHAKWSPAATVTFMYEADIHINEDLMETLSLEEKRAWIESSPTRVFDLDENTGQ 51
RKGIGKDHAKWSPAATVTF+YE IHINE+LMETL+LEEKR W+ESSPTRVF +D NT Q
Sbjct: 177 RKGIGKDHAKWSPAATVTFLYEPQIHINEELMETLTLEEKRGWVESSPTRVFGMDPNTQQ 236
Query: 50 VVVVDREAYTYDDEVI 3
VVVVD EAYTYD+EVI
Sbjct: 237 VVVVDPEAYTYDEEVI 252
>ref|XP_020593275.1| DNA-directed RNA polymerases II, IV and V subunit 3-like
[Phalaenopsis equestris]
Length = 323
Score = 418 bits (1074), Expect = e-141
Identities = 211/253 (83%), Positives = 231/253 (91%), Gaps = 1/253 (0%)
Frame = -3
Query: 758 VSYQRFPKVRIREMKDDYCKFELRETDASMANALRRVMIAEVPTVAIDLVEIDTNSSVLN 579
VSYQRFPKV+IREMKDDY KFEL+ETDASMANALRRVMIAEVPT+AIDLVEI+ NSSVLN
Sbjct: 4 VSYQRFPKVKIREMKDDYMKFELQETDASMANALRRVMIAEVPTIAIDLVEIEANSSVLN 63
Query: 578 DEFIAHRLGLIPLTSDDAMRMRFSRDCDSCDGDGQCEFCSVEFHLNVRCDSDQTLDVTSA 399
DEFIAHRLGLIPL SDDAM MRFSRDCD+CDGDGQCE+CSVEFHLNVRCDSDQTLDVTS
Sbjct: 64 DEFIAHRLGLIPLVSDDAMGMRFSRDCDACDGDGQCEYCSVEFHLNVRCDSDQTLDVTSN 123
Query: 398 DLRSTEPRVIPVDVAAKALAI-TADSTSYELSEAAEQRGIIIVKLRRGQELRLRAIARKG 222
DLRSTEPRV+PVDVAA+ LA T D ++ +QRGIIIVKLRRGQELRLRAIARKG
Sbjct: 124 DLRSTEPRVVPVDVAARTLASETGD------FDSQDQRGIIIVKLRRGQELRLRAIARKG 177
Query: 221 IGKDHAKWSPAATVTFMYEADIHINEDLMETLSLEEKRAWIESSPTRVFDLDENTGQVVV 42
IGKDHAKWSPAATVTFMYE +IHINE+LMETL+L+EKR+WIESSPT+VFD+D NT QV V
Sbjct: 178 IGKDHAKWSPAATVTFMYEPEIHINEELMETLTLDEKRSWIESSPTKVFDIDPNTYQVRV 237
Query: 41 VDREAYTYDDEVI 3
+D EAYTYD+EVI
Sbjct: 238 LDPEAYTYDEEVI 250
>ref|XP_020109766.1| DNA-directed RNA polymerases II, IV and V subunit 3-like, partial
[Ananas comosus]
Length = 327
Score = 417 bits (1072), Expect = e-141
Identities = 207/251 (82%), Positives = 231/251 (92%)
Frame = -3
Query: 755 SYQRFPKVRIREMKDDYCKFELRETDASMANALRRVMIAEVPTVAIDLVEIDTNSSVLND 576
SYQRFPKVRIRE++D+Y KFELRETDAS+ANALRRVM+AEVPTVAIDLVE++ NSSVLND
Sbjct: 11 SYQRFPKVRIRELRDEYAKFELRETDASVANALRRVMLAEVPTVAIDLVEVEVNSSVLND 70
Query: 575 EFIAHRLGLIPLTSDDAMRMRFSRDCDSCDGDGQCEFCSVEFHLNVRCDSDQTLDVTSAD 396
EFIAHRLGL+PLTSD AM MRFSRDCD+CDGDGQCE+CSVEFHL VRCD+DQTLDVTSAD
Sbjct: 71 EFIAHRLGLVPLTSDAAMAMRFSRDCDACDGDGQCEYCSVEFHLAVRCDADQTLDVTSAD 130
Query: 395 LRSTEPRVIPVDVAAKALAITADSTSYELSEAAEQRGIIIVKLRRGQELRLRAIARKGIG 216
LRST+P+V PVDVA A+ AD TSY+ S AA+QRGIIIVKLRRGQELRLRAIARKGIG
Sbjct: 131 LRSTDPKVCPVDVAR---ALDADPTSYD-STAADQRGIIIVKLRRGQELRLRAIARKGIG 186
Query: 215 KDHAKWSPAATVTFMYEADIHINEDLMETLSLEEKRAWIESSPTRVFDLDENTGQVVVVD 36
KDHAKWSPAATVTFMYE IHINE++METL+LEEK +W+ESSPT+VFD+D NT QVVV+D
Sbjct: 187 KDHAKWSPAATVTFMYEPSIHINEEMMETLTLEEKSSWVESSPTKVFDIDPNTQQVVVID 246
Query: 35 REAYTYDDEVI 3
EAYTYDDEVI
Sbjct: 247 PEAYTYDDEVI 257
>gb|OAY65904.1| DNA-directed RNA polymerases II, IV and V subunit 3 [Ananas
comosus]
Length = 378
Score = 417 bits (1072), Expect = e-140
Identities = 207/251 (82%), Positives = 231/251 (92%)
Frame = -3
Query: 755 SYQRFPKVRIREMKDDYCKFELRETDASMANALRRVMIAEVPTVAIDLVEIDTNSSVLND 576
SYQRFPKVRIRE++D+Y KFELRETDAS+ANALRRVM+AEVPTVAIDLVE++ NSSVLND
Sbjct: 62 SYQRFPKVRIRELRDEYAKFELRETDASVANALRRVMLAEVPTVAIDLVEVEVNSSVLND 121
Query: 575 EFIAHRLGLIPLTSDDAMRMRFSRDCDSCDGDGQCEFCSVEFHLNVRCDSDQTLDVTSAD 396
EFIAHRLGL+PLTSD AM MRFSRDCD+CDGDGQCE+CSVEFHL VRCD+DQTLDVTSAD
Sbjct: 122 EFIAHRLGLVPLTSDAAMAMRFSRDCDACDGDGQCEYCSVEFHLAVRCDADQTLDVTSAD 181
Query: 395 LRSTEPRVIPVDVAAKALAITADSTSYELSEAAEQRGIIIVKLRRGQELRLRAIARKGIG 216
LRST+P+V PVDVA A+ AD TSY+ S AA+QRGIIIVKLRRGQELRLRAIARKGIG
Sbjct: 182 LRSTDPKVCPVDVAR---ALDADPTSYD-STAADQRGIIIVKLRRGQELRLRAIARKGIG 237
Query: 215 KDHAKWSPAATVTFMYEADIHINEDLMETLSLEEKRAWIESSPTRVFDLDENTGQVVVVD 36
KDHAKWSPAATVTFMYE IHINE++METL+LEEK +W+ESSPT+VFD+D NT QVVV+D
Sbjct: 238 KDHAKWSPAATVTFMYEPSIHINEEMMETLTLEEKSSWVESSPTKVFDIDPNTQQVVVID 297
Query: 35 REAYTYDDEVI 3
EAYTYDDEVI
Sbjct: 298 PEAYTYDDEVI 308
>ref|XP_010241296.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
[Nelumbo nucifera]
Length = 321
Score = 413 bits (1062), Expect = e-139
Identities = 209/252 (82%), Positives = 227/252 (90%)
Frame = -3
Query: 758 VSYQRFPKVRIREMKDDYCKFELRETDASMANALRRVMIAEVPTVAIDLVEIDTNSSVLN 579
VSYQRFPKV+IREMKDDY KF+LRETDASMANALRRVM+AEVPT+AIDLVEI+ NSSVLN
Sbjct: 4 VSYQRFPKVKIREMKDDYLKFDLRETDASMANALRRVMLAEVPTIAIDLVEIEVNSSVLN 63
Query: 578 DEFIAHRLGLIPLTSDDAMRMRFSRDCDSCDGDGQCEFCSVEFHLNVRCDSDQTLDVTSA 399
DEFIAHRLGLIPLTSD AM MRFSRDCD+CDGDGQCE+CSVEFHL VRCDSDQTLDVTS
Sbjct: 64 DEFIAHRLGLIPLTSDRAMGMRFSRDCDACDGDGQCEYCSVEFHLKVRCDSDQTLDVTSH 123
Query: 398 DLRSTEPRVIPVDVAAKALAITADSTSYELSEAAEQRGIIIVKLRRGQELRLRAIARKGI 219
DL+S++P V+PVDVA A+S Y +A+EQRGI+IVKLRRGQELRLRAIARKGI
Sbjct: 124 DLKSSDPSVVPVDVAQ-----YAESGGY---DASEQRGILIVKLRRGQELRLRAIARKGI 175
Query: 218 GKDHAKWSPAATVTFMYEADIHINEDLMETLSLEEKRAWIESSPTRVFDLDENTGQVVVV 39
GKDHAKWSPAATVTFMYE + HINEDLMETL+LEEKR WIESSPTRVFD+D NT QVVVV
Sbjct: 176 GKDHAKWSPAATVTFMYEPEFHINEDLMETLTLEEKRDWIESSPTRVFDIDPNTHQVVVV 235
Query: 38 DREAYTYDDEVI 3
D EAYTYDDEVI
Sbjct: 236 DPEAYTYDDEVI 247
>ref|XP_010275045.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
[Nelumbo nucifera]
Length = 321
Score = 412 bits (1058), Expect = e-139
Identities = 209/252 (82%), Positives = 229/252 (90%)
Frame = -3
Query: 758 VSYQRFPKVRIREMKDDYCKFELRETDASMANALRRVMIAEVPTVAIDLVEIDTNSSVLN 579
VSYQRFPKV+IREMKDDY KFELRETDAS+ANALRRVMIAEVPT+AIDLVEI+ NSSVLN
Sbjct: 4 VSYQRFPKVKIREMKDDYLKFELRETDASIANALRRVMIAEVPTIAIDLVEIEGNSSVLN 63
Query: 578 DEFIAHRLGLIPLTSDDAMRMRFSRDCDSCDGDGQCEFCSVEFHLNVRCDSDQTLDVTSA 399
DEFIAHRLGLIPLTS+ AM MRFSRDCD+CDGDGQCE+CSVEFHL+VRCD+DQTLDVTS
Sbjct: 64 DEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEYCSVEFHLHVRCDTDQTLDVTSY 123
Query: 398 DLRSTEPRVIPVDVAAKALAITADSTSYELSEAAEQRGIIIVKLRRGQELRLRAIARKGI 219
DLRS++P V+PVDVA ++ST Y +A+EQRGIIIVKLRRGQELRLRAIARKGI
Sbjct: 124 DLRSSDPSVVPVDVAQH-----SESTGY---DASEQRGIIIVKLRRGQELRLRAIARKGI 175
Query: 218 GKDHAKWSPAATVTFMYEADIHINEDLMETLSLEEKRAWIESSPTRVFDLDENTGQVVVV 39
GKDHAKWSPAATVTFMYE +IHINEDLMETL+L+EKR WIESSPT+VF LD NT QVVVV
Sbjct: 176 GKDHAKWSPAATVTFMYEPEIHINEDLMETLTLDEKRDWIESSPTKVFGLDPNTHQVVVV 235
Query: 38 DREAYTYDDEVI 3
D EAYTYDDEVI
Sbjct: 236 DPEAYTYDDEVI 247
>gb|PKA55547.1| DNA-directed RNA polymerase II subunit RPB3-A [Apostasia
shenzhenica]
Length = 320
Score = 410 bits (1053), Expect = e-138
Identities = 205/252 (81%), Positives = 229/252 (90%)
Frame = -3
Query: 758 VSYQRFPKVRIREMKDDYCKFELRETDASMANALRRVMIAEVPTVAIDLVEIDTNSSVLN 579
VSYQRFP+++IREMKDDY KFELR+TDASMANALRRVMI+EVPT+AIDLVEI+ NSSVLN
Sbjct: 4 VSYQRFPQIKIREMKDDYMKFELRDTDASMANALRRVMISEVPTIAIDLVEIEVNSSVLN 63
Query: 578 DEFIAHRLGLIPLTSDDAMRMRFSRDCDSCDGDGQCEFCSVEFHLNVRCDSDQTLDVTSA 399
DEFIAHRLGLIPL S+DAM MRFSRDCD+CDGDGQCE+CSVEFHLNV CDSDQTLDVTS+
Sbjct: 64 DEFIAHRLGLIPLISEDAMGMRFSRDCDACDGDGQCEYCSVEFHLNVLCDSDQTLDVTSS 123
Query: 398 DLRSTEPRVIPVDVAAKALAITADSTSYELSEAAEQRGIIIVKLRRGQELRLRAIARKGI 219
DLRSTEPRV PVDVAA+A A ++ Y ++ + +GIIIVKLRRGQELRLRAIARKGI
Sbjct: 124 DLRSTEPRVCPVDVAARAFA--SEIGGY---DSPDHKGIIIVKLRRGQELRLRAIARKGI 178
Query: 218 GKDHAKWSPAATVTFMYEADIHINEDLMETLSLEEKRAWIESSPTRVFDLDENTGQVVVV 39
GKDHAKWSPAATVTFMYE DIHINE+LMETL+LEEKR+W+ESSPTRVFD+D T QV VV
Sbjct: 179 GKDHAKWSPAATVTFMYEPDIHINEELMETLTLEEKRSWVESSPTRVFDIDPVTQQVKVV 238
Query: 38 DREAYTYDDEVI 3
D EAYTYD+EVI
Sbjct: 239 DAEAYTYDEEVI 250
>ref|XP_006853170.1| DNA-directed RNA polymerases II, IV and V subunit 3 [Amborella
trichopoda]
gb|ERN14637.1| hypothetical protein AMTR_s00038p00194050 [Amborella trichopoda]
Length = 324
Score = 406 bits (1043), Expect = e-136
Identities = 203/252 (80%), Positives = 226/252 (89%)
Frame = -3
Query: 758 VSYQRFPKVRIREMKDDYCKFELRETDASMANALRRVMIAEVPTVAIDLVEIDTNSSVLN 579
VSYQRFPKV+IREMKDDY KFELRETD SMANALRR+M+AEVPT+AIDLVEI+ NSSVLN
Sbjct: 4 VSYQRFPKVKIREMKDDYLKFELRETDPSMANALRRIMLAEVPTIAIDLVEIEANSSVLN 63
Query: 578 DEFIAHRLGLIPLTSDDAMRMRFSRDCDSCDGDGQCEFCSVEFHLNVRCDSDQTLDVTSA 399
DEF+AHRLGLIPLTS+ AM MRFSRDCD+CDGDGQCE+CSVEF L+V+CDSDQTLDVTSA
Sbjct: 64 DEFLAHRLGLIPLTSEKAMSMRFSRDCDACDGDGQCEYCSVEFQLSVKCDSDQTLDVTSA 123
Query: 398 DLRSTEPRVIPVDVAAKALAITADSTSYELSEAAEQRGIIIVKLRRGQELRLRAIARKGI 219
DL S++ VIPVDVA + + DS + +A+EQRGIIIVKLRRGQELRLRAIARKGI
Sbjct: 124 DLVSSDIHVIPVDVAGRGM----DSNGF---DASEQRGIIIVKLRRGQELRLRAIARKGI 176
Query: 218 GKDHAKWSPAATVTFMYEADIHINEDLMETLSLEEKRAWIESSPTRVFDLDENTGQVVVV 39
GKDHAKWSP ATVTFMYE +IHIN+DLMETLSL+EKR W+ESSPTRVFD+D NT QVVVV
Sbjct: 177 GKDHAKWSPGATVTFMYEPEIHINDDLMETLSLDEKREWVESSPTRVFDIDPNTHQVVVV 236
Query: 38 DREAYTYDDEVI 3
D EAYTYDDEVI
Sbjct: 237 DPEAYTYDDEVI 248
>gb|OVA02066.1| DNA-directed RNA polymerase [Macleaya cordata]
Length = 419
Score = 406 bits (1044), Expect = e-135
Identities = 203/251 (80%), Positives = 226/251 (90%)
Frame = -3
Query: 755 SYQRFPKVRIREMKDDYCKFELRETDASMANALRRVMIAEVPTVAIDLVEIDTNSSVLND 576
SYQRFPK++IREMKDDY KFELRETD SMANALRRVMIAEVPT+AIDLVEI+ NS+VLND
Sbjct: 5 SYQRFPKIKIREMKDDYMKFELRETDPSMANALRRVMIAEVPTIAIDLVEIEVNSTVLND 64
Query: 575 EFIAHRLGLIPLTSDDAMRMRFSRDCDSCDGDGQCEFCSVEFHLNVRCDSDQTLDVTSAD 396
EFIAHRLGLIPLTS+ AM MRFSRDCD+CDGDGQCE+CSVEFHL+VRCD DQTLDVTSAD
Sbjct: 65 EFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEYCSVEFHLSVRCDQDQTLDVTSAD 124
Query: 395 LRSTEPRVIPVDVAAKALAITADSTSYELSEAAEQRGIIIVKLRRGQELRLRAIARKGIG 216
L S++P V+PVDVAA+ + S+ Y +A+E RGIIIVKLRRGQELRLRAIARKGIG
Sbjct: 125 LLSSDPSVVPVDVAAR-----STSSGY---DASENRGIIIVKLRRGQELRLRAIARKGIG 176
Query: 215 KDHAKWSPAATVTFMYEADIHINEDLMETLSLEEKRAWIESSPTRVFDLDENTGQVVVVD 36
KDHAKWSP ATVTFMYE DIHINED+ME L+LEEK++WIESSPT+VFD+D NT QVVVVD
Sbjct: 177 KDHAKWSPTATVTFMYEPDIHINEDMMERLTLEEKQSWIESSPTKVFDIDPNTQQVVVVD 236
Query: 35 REAYTYDDEVI 3
EAYTYDDEVI
Sbjct: 237 PEAYTYDDEVI 247
>gb|PIA27129.1| hypothetical protein AQUCO_08300072v1 [Aquilegia coerulea]
Length = 324
Score = 400 bits (1027), Expect = e-134
Identities = 201/251 (80%), Positives = 227/251 (90%)
Frame = -3
Query: 755 SYQRFPKVRIREMKDDYCKFELRETDASMANALRRVMIAEVPTVAIDLVEIDTNSSVLND 576
S QRFPK++IREMKD+Y KFELRETDASMANALRRVMIAEVPT+AIDLVEI+ NSSVLND
Sbjct: 8 SNQRFPKIKIREMKDEYLKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLND 67
Query: 575 EFIAHRLGLIPLTSDDAMRMRFSRDCDSCDGDGQCEFCSVEFHLNVRCDSDQTLDVTSAD 396
EFI+HRLGLIPLTSD AM MRFSRDCD+CDGDGQCE CSVEFHL+VRCD DQTLDVTSAD
Sbjct: 68 EFISHRLGLIPLTSDRAMGMRFSRDCDACDGDGQCEHCSVEFHLDVRCDQDQTLDVTSAD 127
Query: 395 LRSTEPRVIPVDVAAKALAITADSTSYELSEAAEQRGIIIVKLRRGQELRLRAIARKGIG 216
L ST+P VIPVDVAAK + S++Y +A+E +GIIIVKLRRGQELRLRAIARKGIG
Sbjct: 128 LISTDPSVIPVDVAAK-----SSSSAY---DASENKGIIIVKLRRGQELRLRAIARKGIG 179
Query: 215 KDHAKWSPAATVTFMYEADIHINEDLMETLSLEEKRAWIESSPTRVFDLDENTGQVVVVD 36
KDHAKWSPAATVTFMYE +I INE++ME+LS+++KR+WIESSPT+VFD+D NT QVVVVD
Sbjct: 180 KDHAKWSPAATVTFMYEPEIRINEEMMESLSIDDKRSWIESSPTKVFDIDPNTQQVVVVD 239
Query: 35 REAYTYDDEVI 3
EAYTYD+EVI
Sbjct: 240 PEAYTYDEEVI 250
>ref|XP_022726703.1| DNA-directed RNA polymerases II, IV and V subunit 3 [Durio
zibethinus]
Length = 318
Score = 397 bits (1020), Expect = e-133
Identities = 201/252 (79%), Positives = 223/252 (88%)
Frame = -3
Query: 758 VSYQRFPKVRIREMKDDYCKFELRETDASMANALRRVMIAEVPTVAIDLVEIDTNSSVLN 579
VSYQRFPKV+IRE+KDDY KFELR+TDASMANALRRVMIAEVPT+AIDLVEI+ NSSVLN
Sbjct: 4 VSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLN 63
Query: 578 DEFIAHRLGLIPLTSDDAMRMRFSRDCDSCDGDGQCEFCSVEFHLNVRCDSDQTLDVTSA 399
DEFIAHRLGLIPLTS+ AM MRFSRDCD+CDGDGQCEFCSVEFHL +C +DQTLDVTS
Sbjct: 64 DEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMNDQTLDVTSK 123
Query: 398 DLRSTEPRVIPVDVAAKALAITADSTSYELSEAAEQRGIIIVKLRRGQELRLRAIARKGI 219
DL S++ V+PVD DS Y +++EQRGIIIVKLRRGQELRLRAIARKGI
Sbjct: 124 DLYSSDHTVVPVDF--------TDSAGY---DSSEQRGIIIVKLRRGQELRLRAIARKGI 172
Query: 218 GKDHAKWSPAATVTFMYEADIHINEDLMETLSLEEKRAWIESSPTRVFDLDENTGQVVVV 39
GKDHAKWSPAATVTFMYEA+IHINEDLMETL+LEEK++++ESSPTRVFD+D NT QVVVV
Sbjct: 173 GKDHAKWSPAATVTFMYEAEIHINEDLMETLTLEEKQSFVESSPTRVFDIDPNTQQVVVV 232
Query: 38 DREAYTYDDEVI 3
D EAYTYDDEVI
Sbjct: 233 DPEAYTYDDEVI 244
>ref|XP_002518700.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
[Ricinus communis]
gb|EEF43625.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
Length = 318
Score = 397 bits (1019), Expect = e-133
Identities = 197/251 (78%), Positives = 224/251 (89%)
Frame = -3
Query: 755 SYQRFPKVRIREMKDDYCKFELRETDASMANALRRVMIAEVPTVAIDLVEIDTNSSVLND 576
SYQRFP+++IRE+KDDYCKFELR+TDASMANALRRVMIAEVPTVAIDLVEI+ NSSVLND
Sbjct: 5 SYQRFPRIKIRELKDDYCKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSSVLND 64
Query: 575 EFIAHRLGLIPLTSDDAMRMRFSRDCDSCDGDGQCEFCSVEFHLNVRCDSDQTLDVTSAD 396
EFIAHRLGLIPLTS+ AM MRFSRDCD+CDGDGQC++CSVEFHL +C +DQTLDVTS D
Sbjct: 65 EFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCDYCSVEFHLRAKCITDQTLDVTSKD 124
Query: 395 LRSTEPRVIPVDVAAKALAITADSTSYELSEAAEQRGIIIVKLRRGQELRLRAIARKGIG 216
L S++ V+PVD +DS+ Y +++EQRGIIIVKLRRGQELRLRAIARKGIG
Sbjct: 125 LYSSDHTVVPVDF--------SDSSGY---DSSEQRGIIIVKLRRGQELRLRAIARKGIG 173
Query: 215 KDHAKWSPAATVTFMYEADIHINEDLMETLSLEEKRAWIESSPTRVFDLDENTGQVVVVD 36
KDHAKWSPAATVTFMYE DIHINEDLME+LSLEEK++W+ESSPT+VFD+D NT QVVVVD
Sbjct: 174 KDHAKWSPAATVTFMYEPDIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTQQVVVVD 233
Query: 35 REAYTYDDEVI 3
EAYTYD+EVI
Sbjct: 234 PEAYTYDEEVI 244
>ref|XP_006422955.1| DNA-directed RNA polymerases II, IV and V subunit 3 [Citrus
clementina]
ref|XP_006487022.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
[Citrus sinensis]
gb|ESR36195.1| hypothetical protein CICLE_v10028849mg [Citrus clementina]
gb|KDO59794.1| hypothetical protein CISIN_1g020936mg [Citrus sinensis]
gb|KDO59795.1| hypothetical protein CISIN_1g020936mg [Citrus sinensis]
dbj|GAY54950.1| hypothetical protein CUMW_160720 [Citrus unshiu]
Length = 319
Score = 396 bits (1018), Expect = e-133
Identities = 198/251 (78%), Positives = 220/251 (87%)
Frame = -3
Query: 755 SYQRFPKVRIREMKDDYCKFELRETDASMANALRRVMIAEVPTVAIDLVEIDTNSSVLND 576
SYQRFPKV+IRE+KDDY KFELR+TDASMANALRRVMIAEVPT+AIDLVEI+ NSSVLND
Sbjct: 5 SYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLND 64
Query: 575 EFIAHRLGLIPLTSDDAMRMRFSRDCDSCDGDGQCEFCSVEFHLNVRCDSDQTLDVTSAD 396
EFIAHRLGLIPLTS+ AM MRFSRDCD+CDGDGQCEFCSVEFHL +C SDQTLDVTS D
Sbjct: 65 EFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTSKD 124
Query: 395 LRSTEPRVIPVDVAAKALAITADSTSYELSEAAEQRGIIIVKLRRGQELRLRAIARKGIG 216
L S++ V+PVD D Y+ ++ +QRGIIIVKLRRGQELRLRAIARKGIG
Sbjct: 125 LYSSDHSVVPVDF--------VDPAGYDSTD--QQRGIIIVKLRRGQELRLRAIARKGIG 174
Query: 215 KDHAKWSPAATVTFMYEADIHINEDLMETLSLEEKRAWIESSPTRVFDLDENTGQVVVVD 36
KDHAKWSPAATVTFMYE +IHINEDLME+LSLEEK++W+ESSPT+VFD+D NTGQV VVD
Sbjct: 175 KDHAKWSPAATVTFMYEPEIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTGQVYVVD 234
Query: 35 REAYTYDDEVI 3
EAYTYDDEVI
Sbjct: 235 AEAYTYDDEVI 245
>ref|XP_007042502.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
[Theobroma cacao]
gb|EOX98333.1| DNA-directed RNA polymerase family protein [Theobroma cacao]
Length = 318
Score = 394 bits (1011), Expect = e-132
Identities = 198/252 (78%), Positives = 222/252 (88%)
Frame = -3
Query: 758 VSYQRFPKVRIREMKDDYCKFELRETDASMANALRRVMIAEVPTVAIDLVEIDTNSSVLN 579
VSYQRFPKV+IRE+KDDY KFELR+TDASMANALRRVMIAEVPT+AIDLVEI+ NSSVLN
Sbjct: 4 VSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLN 63
Query: 578 DEFIAHRLGLIPLTSDDAMRMRFSRDCDSCDGDGQCEFCSVEFHLNVRCDSDQTLDVTSA 399
DEFIAHRLGLIPLTS+ AM MRFSRDCD+CDGDGQCEFCSVEFHL +C +DQTLDVTS
Sbjct: 64 DEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDQTLDVTSK 123
Query: 398 DLRSTEPRVIPVDVAAKALAITADSTSYELSEAAEQRGIIIVKLRRGQELRLRAIARKGI 219
DL S++ V+PVD DS Y +++EQRGIIIVKLRRGQELRLRAIARKGI
Sbjct: 124 DLYSSDHTVVPVDF--------TDSAGY---DSSEQRGIIIVKLRRGQELRLRAIARKGI 172
Query: 218 GKDHAKWSPAATVTFMYEADIHINEDLMETLSLEEKRAWIESSPTRVFDLDENTGQVVVV 39
GKDHAKWSPAATVTFMYE +IHINED+METL+LEEK++++ESSPTRVFD+D NT QVVVV
Sbjct: 173 GKDHAKWSPAATVTFMYEPEIHINEDMMETLTLEEKQSFVESSPTRVFDIDPNTQQVVVV 232
Query: 38 DREAYTYDDEVI 3
D EAYTYDDEV+
Sbjct: 233 DPEAYTYDDEVL 244
>gb|PIA27130.1| hypothetical protein AQUCO_08300072v1 [Aquilegia coerulea]
Length = 346
Score = 394 bits (1013), Expect = e-132
Identities = 200/265 (75%), Positives = 226/265 (85%), Gaps = 14/265 (5%)
Frame = -3
Query: 755 SYQRFPKVRIREMKDDYCKFELRETDASMANALRRVMIAEVPTVAIDLVEIDTNSSVLND 576
S QRFPK++IREMKD+Y KFELRETDASMANALRRVMIAEVPT+AIDLVEI+ NSSVLND
Sbjct: 8 SNQRFPKIKIREMKDEYLKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLND 67
Query: 575 EFIAHRLGLIPLTSDDAMRMRFSRDCDSCDGDGQCEFCSVEFHLNVRCDSDQTLDVTSAD 396
EFI+HRLGLIPLTSD AM MRFSRDCD+CDGDGQCE CSVEFHL+VRCD DQTLDVTSAD
Sbjct: 68 EFISHRLGLIPLTSDRAMGMRFSRDCDACDGDGQCEHCSVEFHLDVRCDQDQTLDVTSAD 127
Query: 395 LRSTEPRVIPVDVAAKALAITADSTSYE--------------LSEAAEQRGIIIVKLRRG 258
L ST+P VIPVDVAAK+ + D++ + L +RGIIIVKLRRG
Sbjct: 128 LISTDPSVIPVDVAAKSSSSAYDASENKACLGLRQILMLLCLLERKIYRRGIIIVKLRRG 187
Query: 257 QELRLRAIARKGIGKDHAKWSPAATVTFMYEADIHINEDLMETLSLEEKRAWIESSPTRV 78
QELRLRAIARKGIGKDHAKWSPAATVTFMYE +I INE++ME+LS+++KR+WIESSPT+V
Sbjct: 188 QELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIRINEEMMESLSIDDKRSWIESSPTKV 247
Query: 77 FDLDENTGQVVVVDREAYTYDDEVI 3
FD+D NT QVVVVD EAYTYD+EVI
Sbjct: 248 FDIDPNTQQVVVVDPEAYTYDEEVI 272
>ref|XP_003576823.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
[Brachypodium distachyon]
gb|KQJ86902.1| hypothetical protein BRADI_4g08350v3 [Brachypodium distachyon]
Length = 330
Score = 391 bits (1005), Expect = e-131
Identities = 197/253 (77%), Positives = 220/253 (86%), Gaps = 1/253 (0%)
Frame = -3
Query: 758 VSYQRFPKVRIREMKDDYCKFELRETDASMANALRRVMIAEVPTVAIDLVEIDTNSSVLN 579
VSYQRFP+VRIRE+KDDY KFELR+TDASMANALRRVMIAEVPTVAIDLVEI++NSSVLN
Sbjct: 8 VSYQRFPRVRIRELKDDYAKFELRDTDASMANALRRVMIAEVPTVAIDLVEIESNSSVLN 67
Query: 578 DEFIAHRLGLIPLTSDDAMRMRFSRDCDSCDGDGQCEFCSVEFHLNVRC-DSDQTLDVTS 402
DEFIAHRLGLIPLTS AM MRFSRDCD+CDGDG CE CSVEFHL R D+++TL+VTS
Sbjct: 68 DEFIAHRLGLIPLTSSGAMGMRFSRDCDACDGDGSCEHCSVEFHLAARATDANKTLEVTS 127
Query: 401 ADLRSTEPRVIPVDVAAKALAITADSTSYELSEAAEQRGIIIVKLRRGQELRLRAIARKG 222
DLRST+P+V PVD A + Y+ S A++ RGI+IVKLRRGQELRLRAIARKG
Sbjct: 128 NDLRSTDPKVCPVDQAMAYQQAIGTADPYDTSTASDHRGILIVKLRRGQELRLRAIARKG 187
Query: 221 IGKDHAKWSPAATVTFMYEADIHINEDLMETLSLEEKRAWIESSPTRVFDLDENTGQVVV 42
I KDHAKWSPAATVTFMYE DI INE+LMETL+LEEK +W+ESSPT+VFD+D NT QVVV
Sbjct: 188 IAKDHAKWSPAATVTFMYEPDIRINEELMETLTLEEKTSWVESSPTKVFDIDPNTQQVVV 247
Query: 41 VDREAYTYDDEVI 3
VDREAYTYDDEVI
Sbjct: 248 VDREAYTYDDEVI 260