BLASTX nr result
ID: Ophiopogon25_contig00016496
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00016496
(1326 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN67821.1| hypothetical protein VITISV_025855, partial [Vit... 74 1e-27
emb|CAN81238.1| hypothetical protein VITISV_031073 [Vitis vinifera] 72 2e-27
emb|CAN61065.1| hypothetical protein VITISV_004411 [Vitis vinifera] 72 2e-27
emb|CAN78154.1| hypothetical protein VITISV_032622 [Vitis vinifera] 72 3e-27
emb|CAN62431.1| hypothetical protein VITISV_015835 [Vitis vinifera] 73 8e-27
emb|CAN64073.1| hypothetical protein VITISV_038270 [Vitis vinifera] 77 1e-26
dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Gl... 77 2e-26
emb|CAN62045.1| hypothetical protein VITISV_040357 [Vitis vinifera] 76 2e-26
emb|CAN64450.1| hypothetical protein VITISV_023114 [Vitis vinifera] 77 2e-26
gb|PRQ27363.1| putative RNA-directed DNA polymerase [Rosa chinen... 77 4e-26
emb|CAN80961.1| hypothetical protein VITISV_021825 [Vitis vinifera] 70 4e-26
gb|PRQ52817.1| putative RNA-directed DNA polymerase [Rosa chinen... 78 5e-26
emb|CAN69052.1| hypothetical protein VITISV_007852 [Vitis vinifera] 73 8e-26
emb|CAN73613.1| hypothetical protein VITISV_023299 [Vitis vinifera] 70 1e-25
gb|KYP31265.1| Retrovirus-related Pol polyprotein from transposo... 78 1e-25
gb|PRQ35129.1| putative RNA-directed DNA polymerase [Rosa chinen... 72 2e-25
emb|CAN71426.1| hypothetical protein VITISV_002521 [Vitis vinifera] 74 2e-25
gb|PNY13361.1| putative retrotransposon Ty1-copia subclass prote... 73 2e-25
emb|CAN83337.1| hypothetical protein VITISV_004574 [Vitis vinifera] 70 2e-25
emb|CAN74511.1| hypothetical protein VITISV_011891 [Vitis vinifera] 72 3e-25
>emb|CAN67821.1| hypothetical protein VITISV_025855, partial [Vitis vinifera]
Length = 1356
Score = 73.6 bits (179), Expect(3) = 1e-27
Identities = 36/79 (45%), Positives = 52/79 (65%)
Frame = +2
Query: 830 NFTQCPQNKVDHKLINSKEYVYAVDSLMYAVSCIRSNISHIVEILRRLQ*NPDVIH*KAI 1009
+ QCP+N ++ + + Y AV SLMYA C R +I++IV +L R NP + H KA
Sbjct: 1111 SLNQCPKNSLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWKAA 1170
Query: 1010 KKVLRYLQKTNDYLLIYRR 1066
K+V+RYLQ+T +Y+L YRR
Sbjct: 1171 KRVMRYLQRTKEYMLTYRR 1189
Score = 56.6 bits (135), Expect(3) = 1e-27
Identities = 28/49 (57%), Positives = 38/49 (77%)
Frame = +3
Query: 666 FLTKHFDMKVLSDDHTVLGVKILRNQAKYLLGLSLRTYIAKDLQRYDIQ 812
FL+KHF+MK L D VLG++I R++++ +LGLS RTYI K LQRY +Q
Sbjct: 1047 FLSKHFEMKDLGDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRYGMQ 1095
Score = 43.9 bits (102), Expect(3) = 1e-27
Identities = 28/83 (33%), Positives = 41/83 (49%)
Frame = +1
Query: 400 KLIICSITKTYYXXXXXXXXXXXXXXXXXXPTRVVTANGFGKNPVDLCINVDLCVCPKIS 579
K ++C +TK+ Y +++ + GF N +D C V K S
Sbjct: 970 KNMVCKLTKSIYGLKQASRQWYFKFH------QIIVSYGFEANLMDEC------VYHKFS 1017
Query: 580 GSRFIILV*YVDDILLVSNDIHL 648
GS++I LV YVDDILL +NDI +
Sbjct: 1018 GSKYIFLVLYVDDILLATNDISI 1040
>emb|CAN81238.1| hypothetical protein VITISV_031073 [Vitis vinifera]
Length = 1354
Score = 72.4 bits (176), Expect(3) = 2e-27
Identities = 35/79 (44%), Positives = 52/79 (65%)
Frame = +2
Query: 830 NFTQCPQNKVDHKLINSKEYVYAVDSLMYAVSCIRSNISHIVEILRRLQ*NPDVIH*KAI 1009
+ QCP+N ++ + + Y AV SLMYA C R +I++IV +L R NP + H +A
Sbjct: 1109 SLNQCPKNSLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWRAA 1168
Query: 1010 KKVLRYLQKTNDYLLIYRR 1066
K+V+RYLQ+T +Y+L YRR
Sbjct: 1169 KRVMRYLQRTKEYMLTYRR 1187
Score = 56.6 bits (135), Expect(3) = 2e-27
Identities = 28/49 (57%), Positives = 38/49 (77%)
Frame = +3
Query: 666 FLTKHFDMKVLSDDHTVLGVKILRNQAKYLLGLSLRTYIAKDLQRYDIQ 812
FL+KHF+MK L D VLG++I R++++ +LGLS RTYI K LQRY +Q
Sbjct: 1045 FLSKHFEMKDLGDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRYGMQ 1093
Score = 43.9 bits (102), Expect(3) = 2e-27
Identities = 28/83 (33%), Positives = 41/83 (49%)
Frame = +1
Query: 400 KLIICSITKTYYXXXXXXXXXXXXXXXXXXPTRVVTANGFGKNPVDLCINVDLCVCPKIS 579
K ++C +TK+ Y +++ + GF N +D C V K S
Sbjct: 968 KNMVCKLTKSIYGLKQASRQWYFKFH------QIIVSYGFEANLMDEC------VYHKFS 1015
Query: 580 GSRFIILV*YVDDILLVSNDIHL 648
GS++I LV YVDDILL +NDI +
Sbjct: 1016 GSKYIFLVLYVDDILLATNDISI 1038
>emb|CAN61065.1| hypothetical protein VITISV_004411 [Vitis vinifera]
Length = 872
Score = 72.4 bits (176), Expect(3) = 2e-27
Identities = 35/79 (44%), Positives = 52/79 (65%)
Frame = +2
Query: 830 NFTQCPQNKVDHKLINSKEYVYAVDSLMYAVSCIRSNISHIVEILRRLQ*NPDVIH*KAI 1009
+ QCP+N ++ + + Y AV SLMYA C R +I++IV +L R NP + H +A
Sbjct: 648 SLNQCPKNSLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWRAA 707
Query: 1010 KKVLRYLQKTNDYLLIYRR 1066
K+V+RYLQ+T +Y+L YRR
Sbjct: 708 KRVMRYLQRTKEYMLTYRR 726
Score = 56.6 bits (135), Expect(3) = 2e-27
Identities = 28/49 (57%), Positives = 38/49 (77%)
Frame = +3
Query: 666 FLTKHFDMKVLSDDHTVLGVKILRNQAKYLLGLSLRTYIAKDLQRYDIQ 812
FL+KHF+MK L D VLG++I R++++ +LGLS RTYI K LQRY +Q
Sbjct: 584 FLSKHFEMKDLGDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRYGMQ 632
Score = 43.9 bits (102), Expect(3) = 2e-27
Identities = 28/83 (33%), Positives = 41/83 (49%)
Frame = +1
Query: 400 KLIICSITKTYYXXXXXXXXXXXXXXXXXXPTRVVTANGFGKNPVDLCINVDLCVCPKIS 579
K ++C +TK+ Y +++ + GF N +D C V K S
Sbjct: 507 KNMVCKLTKSIYGLKQASRQWYFKFH------QIIVSYGFEANLMDEC------VYHKFS 554
Query: 580 GSRFIILV*YVDDILLVSNDIHL 648
GS++I LV YVDDILL +NDI +
Sbjct: 555 GSKYIFLVLYVDDILLATNDISI 577
>emb|CAN78154.1| hypothetical protein VITISV_032622 [Vitis vinifera]
Length = 1250
Score = 72.0 bits (175), Expect(3) = 3e-27
Identities = 35/79 (44%), Positives = 52/79 (65%)
Frame = +2
Query: 830 NFTQCPQNKVDHKLINSKEYVYAVDSLMYAVSCIRSNISHIVEILRRLQ*NPDVIH*KAI 1009
+ QCP+N ++ + + Y AV SLMYA C R +I++IV +L R NP + H +A
Sbjct: 1005 SLNQCPKNXLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWRAA 1064
Query: 1010 KKVLRYLQKTNDYLLIYRR 1066
K+V+RYLQ+T +Y+L YRR
Sbjct: 1065 KRVMRYLQRTKEYMLTYRR 1083
Score = 56.6 bits (135), Expect(3) = 3e-27
Identities = 28/49 (57%), Positives = 38/49 (77%)
Frame = +3
Query: 666 FLTKHFDMKVLSDDHTVLGVKILRNQAKYLLGLSLRTYIAKDLQRYDIQ 812
FL+KHF+MK L D VLG++I R++++ +LGLS RTYI K LQRY +Q
Sbjct: 941 FLSKHFEMKDLGDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRYGMQ 989
Score = 43.9 bits (102), Expect(3) = 3e-27
Identities = 28/83 (33%), Positives = 41/83 (49%)
Frame = +1
Query: 400 KLIICSITKTYYXXXXXXXXXXXXXXXXXXPTRVVTANGFGKNPVDLCINVDLCVCPKIS 579
K ++C +TK+ Y +++ + GF N +D C V K S
Sbjct: 864 KNMVCKLTKSIYGLKQASRQWYFKFH------QIIVSYGFEANLMDEC------VYHKFS 911
Query: 580 GSRFIILV*YVDDILLVSNDIHL 648
GS++I LV YVDDILL +NDI +
Sbjct: 912 GSKYIFLVLYVDDILLATNDIXI 934
>emb|CAN62431.1| hypothetical protein VITISV_015835 [Vitis vinifera]
Length = 1217
Score = 72.8 bits (177), Expect(3) = 8e-27
Identities = 38/88 (43%), Positives = 56/88 (63%)
Frame = +2
Query: 830 NFTQCPQNKVDHKLINSKEYVYAVDSLMYAVSCIRSNISHIVEILRRLQ*NPDVIH*KAI 1009
+ QCP+N ++ + + Y AV SLMYA C R +I++IV +L R NP + H +A
Sbjct: 1015 SLNQCPKNSLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPRMDHWRAA 1074
Query: 1010 KKVLRYLQKTNDYLLIYRRSSIPDQVNF 1093
K+V+RYLQ+T +Y+L YRR DQ+ F
Sbjct: 1075 KRVMRYLQRTKEYMLTYRRL---DQLEF 1099
Score = 55.5 bits (132), Expect(3) = 8e-27
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = +3
Query: 666 FLTKHFDMKVLSDDHTVLGVKILRNQAKYLLGLSLRTYIAKDLQRYDIQ 812
FL+KHF+MK + D +LG++I R++++ +LGLS RTYI K LQRY +Q
Sbjct: 951 FLSKHFEMKDIGDASFILGIQIHRDRSRGILGLSQRTYIDKVLQRYGMQ 999
Score = 42.7 bits (99), Expect(3) = 8e-27
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = +1
Query: 496 RVVTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSNDIHL 648
+++ + GF N +D C V K SGS++I LV YVDDILL +NDI +
Sbjct: 900 QIIVSYGFEANLMDEC------VYHKFSGSKYIFLVLYVDDILLATNDISI 944
>emb|CAN64073.1| hypothetical protein VITISV_038270 [Vitis vinifera]
Length = 1181
Score = 77.0 bits (188), Expect(3) = 1e-26
Identities = 39/78 (50%), Positives = 53/78 (67%)
Frame = +2
Query: 839 QCPQNKVDHKLINSKEYVYAVDSLMYAVSCIRSNISHIVEILRRLQ*NPDVIH*KAIKKV 1018
QCP+N+++ K + Y AV SLMYA C R +I++IV +L R NP + H K K+V
Sbjct: 939 QCPKNELEKKDMERFPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWKKAKRV 998
Query: 1019 LRYLQKTNDYLLIYRRSS 1072
+RYLQ+T DY+L YRRSS
Sbjct: 999 MRYLQRTKDYMLTYRRSS 1016
Score = 50.8 bits (120), Expect(3) = 1e-26
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = +1
Query: 496 RVVTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSNDIHL 648
+V+T+ GF +N VD CI + K SGS+FIILV YVDDILL S+D+ L
Sbjct: 821 QVITSFGFKENTVDQCIYL------KFSGSKFIILVLYVDDILLASSDVGL 865
Score = 42.4 bits (98), Expect(3) = 1e-26
Identities = 21/46 (45%), Positives = 32/46 (69%)
Frame = +3
Query: 666 FLTKHFDMKVLSDDHTVLGVKILRNQAKYLLGLSLRTYIAKDLQRY 803
FL+ FDMK L + VLG++I R++++ +LGLS + YI K L R+
Sbjct: 872 FLSSKFDMKDLGNASFVLGIQIHRDRSRGILGLSQKAYIDKVLSRF 917
>dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
Length = 1321
Score = 76.6 bits (187), Expect(3) = 2e-26
Identities = 38/88 (43%), Positives = 54/88 (61%)
Frame = +2
Query: 830 NFTQCPQNKVDHKLINSKEYVYAVDSLMYAVSCIRSNISHIVEILRRLQ*NPDVIH*KAI 1009
N QCP+N + + + + Y V SLMYA C R +I+ V +L R Q NP + H +A
Sbjct: 1080 NLNQCPKNDFEREQMKNIPYASVVGSLMYAQVCTRPDIAFAVGMLGRYQSNPGIDHWRAA 1139
Query: 1010 KKVLRYLQKTNDYLLIYRRSSIPDQVNF 1093
KKVLRYLQ T DY+L+YR++ D + +
Sbjct: 1140 KKVLRYLQGTKDYMLMYRQTDNLDAIGY 1167
Score = 49.3 bits (116), Expect(3) = 2e-26
Identities = 24/53 (45%), Positives = 39/53 (73%)
Frame = +3
Query: 666 FLTKHFDMKVLSDDHTVLGVKILRNQAKYLLGLSLRTYIAKDLQRYDIQF*TP 824
FL+K+FDMK + D V+G+KI R++++ +LGLS TYI K L+R+ ++ +P
Sbjct: 1016 FLSKNFDMKDMGDASYVIGIKIHRDRSRGILGLSQETYINKILERFRMKDCSP 1068
Score = 43.9 bits (102), Expect(3) = 2e-26
Identities = 22/47 (46%), Positives = 31/47 (65%)
Frame = +1
Query: 499 VVTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSND 639
++++ GF +NP+D CI K+SGS+ LV YVDDILL +ND
Sbjct: 966 IISSFGFDENPMDQCIY------HKVSGSKICFLVLYVDDILLAAND 1006
>emb|CAN62045.1| hypothetical protein VITISV_040357 [Vitis vinifera]
Length = 1290
Score = 75.9 bits (185), Expect(3) = 2e-26
Identities = 38/78 (48%), Positives = 53/78 (67%)
Frame = +2
Query: 839 QCPQNKVDHKLINSKEYVYAVDSLMYAVSCIRSNISHIVEILRRLQ*NPDVIH*KAIKKV 1018
QCP+NK+++K + Y A+ SLMYA C R +I++IV +L R P + H K K+V
Sbjct: 1065 QCPKNKLENKDMERFPYASAIGSLMYAQVCTRPDIAYIVGMLGRYLSYPGMDHWKKAKRV 1124
Query: 1019 LRYLQKTNDYLLIYRRSS 1072
+RYLQ+T DY+L YRRSS
Sbjct: 1125 MRYLQRTKDYMLTYRRSS 1142
Score = 51.6 bits (122), Expect(3) = 2e-26
Identities = 29/51 (56%), Positives = 36/51 (70%)
Frame = +1
Query: 496 RVVTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSNDIHL 648
+V+T+ GF KN VD CI + K SGS+FIILV YVDDILL S+D+ L
Sbjct: 947 QVITSFGFKKNIVDQCIYL------KFSGSKFIILVLYVDDILLASSDVGL 991
Score = 42.4 bits (98), Expect(3) = 2e-26
Identities = 21/46 (45%), Positives = 32/46 (69%)
Frame = +3
Query: 666 FLTKHFDMKVLSDDHTVLGVKILRNQAKYLLGLSLRTYIAKDLQRY 803
FL+ FDMK L + VLG++I R++++ +LGLS + YI K L R+
Sbjct: 998 FLSSKFDMKDLGNASFVLGIQIHRDRSRGILGLSQKAYIDKVLSRF 1043
>emb|CAN64450.1| hypothetical protein VITISV_023114 [Vitis vinifera]
Length = 738
Score = 76.6 bits (187), Expect(3) = 2e-26
Identities = 38/79 (48%), Positives = 53/79 (67%)
Frame = +2
Query: 839 QCPQNKVDHKLINSKEYVYAVDSLMYAVSCIRSNISHIVEILRRLQ*NPDVIH*KAIKKV 1018
QCP+N+++ K + Y AV SLMYA C R +I++IV +L R NP + H K K+V
Sbjct: 653 QCPKNELEKKDMERFPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWKKAKRV 712
Query: 1019 LRYLQKTNDYLLIYRRSSI 1075
+RYLQ+T DY+L YRRS +
Sbjct: 713 MRYLQRTKDYMLTYRRSGV 731
Score = 50.8 bits (120), Expect(3) = 2e-26
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = +1
Query: 496 RVVTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSNDIHL 648
+V+T+ GF +N VD CI + K SGS+FIILV YVDDILL S+D+ L
Sbjct: 535 QVITSFGFKENTVDQCIYL------KFSGSKFIILVLYVDDILLASSDVGL 579
Score = 42.4 bits (98), Expect(3) = 2e-26
Identities = 21/46 (45%), Positives = 32/46 (69%)
Frame = +3
Query: 666 FLTKHFDMKVLSDDHTVLGVKILRNQAKYLLGLSLRTYIAKDLQRY 803
FL+ FDMK L + VLG++I R++++ +LGLS + YI K L R+
Sbjct: 586 FLSSKFDMKDLGNASFVLGIQIHRDRSRGILGLSQKAYIDKVLSRF 631
>gb|PRQ27363.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1046
Score = 77.4 bits (189), Expect(3) = 4e-26
Identities = 38/76 (50%), Positives = 51/76 (67%)
Frame = +2
Query: 839 QCPQNKVDHKLINSKEYVYAVDSLMYAVSCIRSNISHIVEILRRLQ*NPDVIH*KAIKKV 1018
QCPQN ++ + + +K Y V SLMYA C R ++++ V IL R Q NP H A KK+
Sbjct: 804 QCPQNDIERENMKTKPYAQLVGSLMYAQVCTRPDLAYAVGILSRFQSNPGPEHWIAGKKI 863
Query: 1019 LRYLQKTNDYLLIYRR 1066
LRYLQ+T D+LL+YRR
Sbjct: 864 LRYLQRTKDHLLVYRR 879
Score = 50.8 bits (120), Expect(3) = 4e-26
Identities = 26/49 (53%), Positives = 36/49 (73%)
Frame = +3
Query: 666 FLTKHFDMKVLSDDHTVLGVKILRNQAKYLLGLSLRTYIAKDLQRYDIQ 812
FL+K FDMK L + VLG++I R++ K LLGLS + YI K L+R+D+Q
Sbjct: 737 FLSKKFDMKDLGEASYVLGIEIKRDRTKCLLGLSQQGYINKVLKRFDMQ 785
Score = 40.4 bits (93), Expect(3) = 4e-26
Identities = 23/50 (46%), Positives = 29/50 (58%)
Frame = +1
Query: 499 VVTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSNDIHL 648
VV+ GF +N VD C+ + KI G FI L+ YVDDILL S + L
Sbjct: 687 VVSNFGFKENQVDECVYM------KIEGKNFIFLILYVDDILLASTSLKL 730
>emb|CAN80961.1| hypothetical protein VITISV_021825 [Vitis vinifera]
Length = 849
Score = 70.1 bits (170), Expect(3) = 4e-26
Identities = 39/85 (45%), Positives = 52/85 (61%)
Frame = +2
Query: 839 QCPQNKVDHKLINSKEYVYAVDSLMYAVSCIRSNISHIVEILRRLQ*NPDVIH*KAIKKV 1018
QCPQN + + + + Y V SLMYA C R +I+ +V +L R N H KA KKV
Sbjct: 669 QCPQNDDEREEMRTIPYSSVVGSLMYAQVCTRPDIAFVVGMLGRSLSNLGSQHWKAAKKV 728
Query: 1019 LRYLQKTNDYLLIYRRSSIPDQVNF 1093
LRYLQ+T D +L Y+R+S+ D V F
Sbjct: 729 LRYLQRTKDLMLTYQRTSLLDVVGF 753
Score = 50.8 bits (120), Expect(3) = 4e-26
Identities = 26/48 (54%), Positives = 33/48 (68%)
Frame = +1
Query: 496 RVVTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSND 639
R++T NGF +N VD CI + ++SGS +I LV YVDDILL SND
Sbjct: 551 RIITQNGFKENTVDRCIYL------RVSGSSYIFLVLYVDDILLASND 592
Score = 47.8 bits (112), Expect(3) = 4e-26
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +3
Query: 669 LTKHFDMKVLSDDHTVLGVKILRNQAKYLLGLSLRTYIAKDLQRYDI 809
L+ HFDMK L + VLG+KILR++A +L LS R YI K L+R+++
Sbjct: 603 LSTHFDMKDLGETSYVLGIKILRDRANGVLKLSQRAYIEKILKRFNM 649
>gb|PRQ52817.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 538
Score = 78.2 bits (191), Expect(3) = 5e-26
Identities = 41/85 (48%), Positives = 55/85 (64%)
Frame = +2
Query: 839 QCPQNKVDHKLINSKEYVYAVDSLMYAVSCIRSNISHIVEILRRLQ*NPDVIH*KAIKKV 1018
QCPQN+++ K + Y AV SL+YA +C R +IS V +L R Q NP + H KA KKV
Sbjct: 300 QCPQNELERKGMERIPYASAVGSLVYAQTCTRPDISFAVGMLGRYQSNPGMDHWKATKKV 359
Query: 1019 LRYLQKTNDYLLIYRRSSIPDQVNF 1093
+RYLQ T +Y+L YRRS + V +
Sbjct: 360 MRYLQGTKEYMLTYRRSDNLEVVGY 384
Score = 45.4 bits (106), Expect(3) = 5e-26
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +1
Query: 502 VTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSNDIHL 648
V + GF +N VD CI + K+SGS+FI L+ YVDDILL S+D+ L
Sbjct: 184 VVSFGFKENIVDRCIYL------KVSGSKFIFLILYVDDILLASSDLGL 226
Score = 44.7 bits (104), Expect(3) = 5e-26
Identities = 20/53 (37%), Positives = 38/53 (71%)
Frame = +3
Query: 666 FLTKHFDMKVLSDDHTVLGVKILRNQAKYLLGLSLRTYIAKDLQRYDIQF*TP 824
FL+K F+MK + + V+G++I R++++ LLGLS + YI + L+R+ ++ +P
Sbjct: 233 FLSKKFEMKDMGEASYVIGIEIFRDRSRGLLGLSQKAYIERVLERFGMEKCSP 285
>emb|CAN69052.1| hypothetical protein VITISV_007852 [Vitis vinifera]
Length = 1104
Score = 73.2 bits (178), Expect(3) = 8e-26
Identities = 37/77 (48%), Positives = 51/77 (66%)
Frame = +2
Query: 839 QCPQNKVDHKLINSKEYVYAVDSLMYAVSCIRSNISHIVEILRRLQ*NPDVIH*KAIKKV 1018
QCP+N+++ K + Y A+ SLMYA C RSNI++IV +L R N + H K K V
Sbjct: 961 QCPKNELEKKDMERFLYASAIGSLMYAQVCTRSNIAYIVGMLGRYLSNXXMDHXKKAKXV 1020
Query: 1019 LRYLQKTNDYLLIYRRS 1069
+RYLQ+T +Y+L YRRS
Sbjct: 1021 MRYLQRTKBYMLTYRRS 1037
Score = 50.8 bits (120), Expect(3) = 8e-26
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = +1
Query: 496 RVVTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSNDIHL 648
+V+T+ GF +N VD CI + K SGS+FIILV YVDDILL S+D+ L
Sbjct: 843 QVITSFGFKENTVDQCIYL------KFSGSKFIILVLYVDDILLASSDVGL 887
Score = 43.5 bits (101), Expect(3) = 8e-26
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +3
Query: 666 FLTKHFDMKVLSDDHTVLGVKILRNQAKYLLGLSLRTYIAKDLQRY 803
FL+ FDMK L D VLG++I R+ + +LGLS + YI K L R+
Sbjct: 894 FLSSKFDMKDLGDASFVLGIQIYRDXPRGILGLSQKAYINKVLSRF 939
>emb|CAN73613.1| hypothetical protein VITISV_023299 [Vitis vinifera]
Length = 1815
Score = 70.5 bits (171), Expect(3) = 1e-25
Identities = 34/79 (43%), Positives = 51/79 (64%)
Frame = +2
Query: 830 NFTQCPQNKVDHKLINSKEYVYAVDSLMYAVSCIRSNISHIVEILRRLQ*NPDVIH*KAI 1009
+ QCP+N ++ + + Y AV SLMYA C R +I++I +L R NP + H +A
Sbjct: 1067 SLNQCPKNSLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIXGMLGRYLSNPGMDHWRAA 1126
Query: 1010 KKVLRYLQKTNDYLLIYRR 1066
K+V+RYLQ+T +Y+L YRR
Sbjct: 1127 KRVMRYLQRTKEYMLTYRR 1145
Score = 54.3 bits (129), Expect(3) = 1e-25
Identities = 27/49 (55%), Positives = 37/49 (75%)
Frame = +3
Query: 666 FLTKHFDMKVLSDDHTVLGVKILRNQAKYLLGLSLRTYIAKDLQRYDIQ 812
FL+KHF+MK L D VLG++I R++++ +LGLS RTYI K LQ Y +Q
Sbjct: 1003 FLSKHFEMKDLGDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQXYGMQ 1051
Score = 42.4 bits (98), Expect(3) = 1e-25
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +1
Query: 550 VDLCVCPKISGSRFIILV*YVDDILLVSNDIHL 648
+D CV K SGS++I LV YVDDILL +NDI +
Sbjct: 964 MDECVYHKFSGSKYIFLVLYVDDILLATNDISI 996
>gb|KYP31265.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 425
Score = 78.2 bits (191), Expect(3) = 1e-25
Identities = 39/86 (45%), Positives = 56/86 (65%)
Frame = +2
Query: 836 TQCPQNKVDHKLINSKEYVYAVDSLMYAVSCIRSNISHIVEILRRLQ*NPDVIH*KAIKK 1015
+QCP+N ++ + + + Y AV SLMYA C R +I+ V +L R Q NP V H KA KK
Sbjct: 186 SQCPKNNLEREHMKNIPYASAVGSLMYAQVCTRPDIAFAVGVLGRYQSNPGVDHWKAAKK 245
Query: 1016 VLRYLQKTNDYLLIYRRSSIPDQVNF 1093
V+RYLQ T D++LIYRR+ + + +
Sbjct: 246 VMRYLQGTKDFMLIYRRTDSLEVIGY 271
Score = 48.5 bits (114), Expect(3) = 1e-25
Identities = 23/53 (43%), Positives = 39/53 (73%)
Frame = +3
Query: 666 FLTKHFDMKVLSDDHTVLGVKILRNQAKYLLGLSLRTYIAKDLQRYDIQF*TP 824
FL+K+FDMK + + V+G+KI R +++ +LGLS TYI K L+R++++ +P
Sbjct: 120 FLSKNFDMKDMGEASYVIGIKIHRERSRGILGLSQETYINKVLERFNMKDCSP 172
Score = 40.4 bits (93), Expect(3) = 1e-25
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +1
Query: 499 VVTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSND 639
V+++ GF +N +D C V K+SGS+ LV YVDDILL +ND
Sbjct: 70 VISSFGFEENIMDQC------VYQKVSGSKICFLVLYVDDILLATND 110
>gb|PRQ35129.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 718
Score = 72.4 bits (176), Expect(3) = 2e-25
Identities = 37/76 (48%), Positives = 49/76 (64%)
Frame = +2
Query: 839 QCPQNKVDHKLINSKEYVYAVDSLMYAVSCIRSNISHIVEILRRLQ*NPDVIH*KAIKKV 1018
QCP+N ++ + + K Y V SLMYA C R +I++ V +L R Q NP H A KKV
Sbjct: 472 QCPRNNLEQESMKDKPYASLVGSLMYAQVCTRPDIAYSVGMLGRFQTNPGHAHWVAGKKV 531
Query: 1019 LRYLQKTNDYLLIYRR 1066
LRYLQ T D+LL+Y+R
Sbjct: 532 LRYLQGTRDHLLVYKR 547
Score = 48.9 bits (115), Expect(3) = 2e-25
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = +1
Query: 499 VVTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSNDIHL 648
V+ ++GF +NP+D C+ + KISGS+FI LV YVDDILL ++D+ L
Sbjct: 355 VMVSHGFVENPLDECVYL------KISGSKFIFLVLYVDDILLANSDLSL 398
Score = 45.1 bits (105), Expect(3) = 2e-25
Identities = 22/46 (47%), Positives = 34/46 (73%)
Frame = +3
Query: 666 FLTKHFDMKVLSDDHTVLGVKILRNQAKYLLGLSLRTYIAKDLQRY 803
FL+++F+MK L + VLG++I R++ K LLGLS + YI K L+R+
Sbjct: 405 FLSRNFEMKDLGEASYVLGIEICRDRKKGLLGLSQKNYIDKVLKRF 450
>emb|CAN71426.1| hypothetical protein VITISV_002521 [Vitis vinifera]
Length = 1489
Score = 74.3 bits (181), Expect(3) = 2e-25
Identities = 37/78 (47%), Positives = 53/78 (67%)
Frame = +2
Query: 839 QCPQNKVDHKLINSKEYVYAVDSLMYAVSCIRSNISHIVEILRRLQ*NPDVIH*KAIKKV 1018
QCP+N+++ K + Y A+ SLMYA C+R I++IV +L R NP + H K K+V
Sbjct: 1247 QCPKNELEKKDMERFPYASAIGSLMYAQVCMRPIIAYIVGMLGRYLSNPGMDHWKKAKRV 1306
Query: 1019 LRYLQKTNDYLLIYRRSS 1072
++YLQ+T DY+L YRRSS
Sbjct: 1307 IQYLQRTKDYMLTYRRSS 1324
Score = 46.2 bits (108), Expect(3) = 2e-25
Identities = 22/46 (47%), Positives = 33/46 (71%)
Frame = +3
Query: 666 FLTKHFDMKVLSDDHTVLGVKILRNQAKYLLGLSLRTYIAKDLQRY 803
FL+ FDMK L D + VLG++I R++++ +LGLS + YI K L R+
Sbjct: 1180 FLSSKFDMKDLGDAYFVLGIQIYRDRSRGILGLSQKAYIDKVLSRF 1225
Score = 45.4 bits (106), Expect(3) = 2e-25
Identities = 25/51 (49%), Positives = 34/51 (66%)
Frame = +1
Query: 496 RVVTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSNDIHL 648
+V+T+ GF +N D CI + K SG +FIILV +VDDILL S+D+ L
Sbjct: 1129 QVITSFGFKENTXDQCIYL------KFSGRKFIILVLFVDDILLASSDVGL 1173
>gb|PNY13361.1| putative retrotransposon Ty1-copia subclass protein [Trifolium
pratense]
Length = 1385
Score = 72.8 bits (177), Expect(3) = 2e-25
Identities = 36/76 (47%), Positives = 50/76 (65%)
Frame = +2
Query: 839 QCPQNKVDHKLINSKEYVYAVDSLMYAVSCIRSNISHIVEILRRLQ*NPDVIH*KAIKKV 1018
QCP+N+V+ +N + + A+ SLMYA C R +I+ +V +L R Q NP H KA KKV
Sbjct: 1143 QCPKNEVEQAEMNDRPFASALGSLMYAQVCTRPDIAFVVGVLGRYQANPGNDHWKAAKKV 1202
Query: 1019 LRYLQKTNDYLLIYRR 1066
+RYLQ T D +L Y+R
Sbjct: 1203 MRYLQGTKDCMLTYKR 1218
Score = 47.4 bits (111), Expect(3) = 2e-25
Identities = 26/48 (54%), Positives = 33/48 (68%)
Frame = +1
Query: 499 VVTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSNDI 642
VVT+ GF +N VD CI K+SGS++I LV YVDDILL SN++
Sbjct: 1026 VVTSLGFEENKVDQCIYF------KVSGSKYIFLVLYVDDILLASNNL 1067
Score = 45.8 bits (107), Expect(3) = 2e-25
Identities = 21/48 (43%), Positives = 36/48 (75%)
Frame = +3
Query: 669 LTKHFDMKVLSDDHTVLGVKILRNQAKYLLGLSLRTYIAKDLQRYDIQ 812
LT+ FDMK L + VLG++I R+++++ LGLS + YI + L+R+++Q
Sbjct: 1077 LTRFFDMKDLGEASFVLGIEIHRDRSRHTLGLSQKAYINRVLERFNMQ 1124
>emb|CAN83337.1| hypothetical protein VITISV_004574 [Vitis vinifera]
Length = 1060
Score = 70.1 bits (170), Expect(3) = 2e-25
Identities = 38/85 (44%), Positives = 52/85 (61%)
Frame = +2
Query: 839 QCPQNKVDHKLINSKEYVYAVDSLMYAVSCIRSNISHIVEILRRLQ*NPDVIH*KAIKKV 1018
QCPQN + + + + Y V +LMYA C +I+ +V +L R NP H KA KKV
Sbjct: 835 QCPQNDDEKEEMKTIPYSPVVGNLMYAQVCTLPDIAFVVGMLGRYLSNPGSQHWKAAKKV 894
Query: 1019 LRYLQKTNDYLLIYRRSSIPDQVNF 1093
LRYLQ T D++L YRR+++ D V F
Sbjct: 895 LRYLQGTKDFMLTYRRTNLLDVVGF 919
Score = 48.9 bits (115), Expect(3) = 2e-25
Identities = 26/51 (50%), Positives = 33/51 (64%)
Frame = +1
Query: 496 RVVTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSNDIHL 648
R++T NGF N V+ CI + ++SGS +I LV YVDDILL SND L
Sbjct: 717 RIITQNGFKDNTVERCIYL------RVSGSSYIFLVLYVDDILLASNDSDL 761
Score = 47.0 bits (110), Expect(3) = 2e-25
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +3
Query: 669 LTKHFDMKVLSDDHTVLGVKILRNQAKYLLGLSLRTYIAKDLQRYDI 809
L+ HFDMK L + VLG+KILR++A +L LS RTYI K L+ +++
Sbjct: 769 LSTHFDMKDLGEASYVLGIKILRDRANGVLKLSQRTYIEKILKMFNM 815
>emb|CAN74511.1| hypothetical protein VITISV_011891 [Vitis vinifera]
Length = 1283
Score = 72.0 bits (175), Expect(3) = 3e-25
Identities = 36/75 (48%), Positives = 50/75 (66%)
Frame = +2
Query: 839 QCPQNKVDHKLINSKEYVYAVDSLMYAVSCIRSNISHIVEILRRLQ*NPDVIH*KAIKKV 1018
QCP+N+++ K + Y AV SLMYA C R +I++IV +L R NP + H K K+V
Sbjct: 1041 QCPKNELEKKDMERFPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWKKAKRV 1100
Query: 1019 LRYLQKTNDYLLIYR 1063
+RYLQ+T DY+L YR
Sbjct: 1101 MRYLQRTKDYMLTYR 1115
Score = 51.2 bits (121), Expect(3) = 3e-25
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = +1
Query: 496 RVVTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSNDIHL 648
+V+T+ GF +N VD CI + K SGS+FIILV YVDDILL S+D+ L
Sbjct: 923 QVITSFGFKENTVDQCIYL------KFSGSKFIILVLYVDDILLASSDVXL 967
Score = 42.4 bits (98), Expect(3) = 3e-25
Identities = 21/46 (45%), Positives = 32/46 (69%)
Frame = +3
Query: 666 FLTKHFDMKVLSDDHTVLGVKILRNQAKYLLGLSLRTYIAKDLQRY 803
FL+ FDMK L + VLG++I R++++ +LGLS + YI K L R+
Sbjct: 974 FLSSKFDMKDLGNASFVLGIQIHRDRSRGILGLSQKAYIDKVLSRF 1019