BLASTX nr result

ID: Ophiopogon25_contig00016481 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00016481
         (644 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020250382.1| double-stranded RNA-binding protein 1-like [...    61   3e-07

>ref|XP_020250382.1| double-stranded RNA-binding protein 1-like [Asparagus officinalis]
 gb|ONK55143.1| uncharacterized protein A4U43_UnF7180 [Asparagus officinalis]
          Length = 351

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 46/134 (34%), Positives = 64/134 (47%), Gaps = 33/134 (24%)
 Frame = -1

Query: 638 SHTQNNPNDNVNGEELLAGSTNNQVHANICSGDEQIAKVAARETFTPE------------ 495
           SH Q NP+  V+ +E L  S N+++   +CSGDEQIAK  A ETF+PE            
Sbjct: 207 SHCQINPSYVVSEKEPLMNS-NSKLPEIMCSGDEQIAKANAAETFSPEAKKYEEEHTCEL 265

Query: 494 ---------------------ALTSNTSNSSDGVKLTEPSTGPEDSAGVALTGGTKRSDA 378
                                A TS+  +SSDG +       PE+S+GV L  G KR++ 
Sbjct: 266 IIGLAERGGSHKLPAETVPLAATTSSKFSSSDGEQFGS-YIRPENSSGVILASGMKRTET 324

Query: 377 MKNEGNTSKKARTI 336
            + EGN  K+ R +
Sbjct: 325 TEIEGNEPKRTRAL 338


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