BLASTX nr result

ID: Ophiopogon25_contig00016463 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00016463
         (875 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020252919.1| arginine/serine-rich coiled-coil protein 2-l...    75   1e-12
ref|XP_020246108.1| protein FAM133-like [Asparagus officinalis] ...    57   7e-06

>ref|XP_020252919.1| arginine/serine-rich coiled-coil protein 2-like isoform X2
           [Asparagus officinalis]
          Length = 203

 Score = 75.5 bits (184), Expect = 1e-12
 Identities = 43/77 (55%), Positives = 49/77 (63%)
 Frame = -1

Query: 575 LRVVKMSGN*KGLGRSQGPRNRLNLPVATMRETQKDQGRSQGLRNQRKIKSIGQEPSTQA 396
           L    M GN KG  RSQ  RN L    ATMR  +K QG+S+  +NQR+ +S G EPST A
Sbjct: 129 LAAAMMKGNQKGQDRSQDQRNLL--AAATMRRNRKGQGQSRDRKNQRRKESTGHEPSTPA 186

Query: 395 VIAIGMVHCHSPDSLAL 345
           V  I MV CHSPDSLAL
Sbjct: 187 VTVIVMVPCHSPDSLAL 203


>ref|XP_020246108.1| protein FAM133-like [Asparagus officinalis]
 gb|ONK57879.1| uncharacterized protein A4U43_C09F5140 [Asparagus officinalis]
          Length = 199

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 32/54 (59%), Positives = 32/54 (59%)
 Frame = -3

Query: 873 SLNTSHTITWXXXXXXXXXXXXXXXXXXXXXDRMMREYRAQLDAERASKLSLGR 712
           SLNTSHTITW                     DRMMREYRAQLDAERA KLSLGR
Sbjct: 46  SLNTSHTITWEEFKKKQKEDELKKGELEADKDRMMREYRAQLDAERARKLSLGR 99


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