BLASTX nr result

ID: Ophiopogon25_contig00016397 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00016397
         (602 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK75650.1| uncharacterized protein A4U43_C03F19110 [Asparagu...    75   3e-12
ref|XP_020257494.1| zinc finger CCCH domain-containing protein 6...    75   4e-12
ref|XP_020257493.1| zinc finger CCCH domain-containing protein 6...    75   4e-12

>gb|ONK75650.1| uncharacterized protein A4U43_C03F19110 [Asparagus officinalis]
          Length = 345

 Score = 74.7 bits (182), Expect = 3e-12
 Identities = 44/105 (41%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
 Frame = +2

Query: 5   HNNYSRPPVEVFGGSYMGVPQAYPRMHHIPSYNRGYSSSVAVASHGHMQHGYNTGYPPSV 184
           +N Y+    E F  +Y          +   S+N G SSS A   + HM HGYNTG+ P  
Sbjct: 250 YNIYNHKSAEAFHRNY----------NQTSSHNFGISSSAARIPNVHMLHGYNTGFVPYA 299

Query: 185 HNQIPSTASYDGHAY-GNPAVQLQPRR---LDDGASGGQFHGWRR 307
            +Q+ +  SY  H Y GNP  QL PRR    DD A+G QFH WRR
Sbjct: 300 RDQMSTRVSYVTHPYDGNPQFQLDPRRRVAFDDRAAGHQFHEWRR 344


>ref|XP_020257494.1| zinc finger CCCH domain-containing protein 62-like isoform X2
           [Asparagus officinalis]
          Length = 444

 Score = 74.7 bits (182), Expect = 4e-12
 Identities = 44/105 (41%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
 Frame = +2

Query: 5   HNNYSRPPVEVFGGSYMGVPQAYPRMHHIPSYNRGYSSSVAVASHGHMQHGYNTGYPPSV 184
           +N Y+    E F  +Y          +   S+N G SSS A   + HM HGYNTG+ P  
Sbjct: 349 YNIYNHKSAEAFHRNY----------NQTSSHNFGISSSAARIPNVHMLHGYNTGFVPYA 398

Query: 185 HNQIPSTASYDGHAY-GNPAVQLQPRR---LDDGASGGQFHGWRR 307
            +Q+ +  SY  H Y GNP  QL PRR    DD A+G QFH WRR
Sbjct: 399 RDQMSTRVSYVTHPYDGNPQFQLDPRRRVAFDDRAAGHQFHEWRR 443


>ref|XP_020257493.1| zinc finger CCCH domain-containing protein 62-like isoform X1
           [Asparagus officinalis]
          Length = 477

 Score = 74.7 bits (182), Expect = 4e-12
 Identities = 44/105 (41%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
 Frame = +2

Query: 5   HNNYSRPPVEVFGGSYMGVPQAYPRMHHIPSYNRGYSSSVAVASHGHMQHGYNTGYPPSV 184
           +N Y+    E F  +Y          +   S+N G SSS A   + HM HGYNTG+ P  
Sbjct: 382 YNIYNHKSAEAFHRNY----------NQTSSHNFGISSSAARIPNVHMLHGYNTGFVPYA 431

Query: 185 HNQIPSTASYDGHAY-GNPAVQLQPRR---LDDGASGGQFHGWRR 307
            +Q+ +  SY  H Y GNP  QL PRR    DD A+G QFH WRR
Sbjct: 432 RDQMSTRVSYVTHPYDGNPQFQLDPRRRVAFDDRAAGHQFHEWRR 476


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