BLASTX nr result
ID: Ophiopogon25_contig00016212
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00016212
(454 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020094803.1| heterodimeric geranylgeranyl pyrophosphate s... 134 4e-35
gb|OAY84582.1| Heterodimeric geranylgeranyl pyrophosphate syntha... 134 4e-35
ref|XP_020688682.1| heterodimeric geranylgeranyl pyrophosphate s... 133 1e-34
ref|XP_020585412.1| heterodimeric geranylgeranyl pyrophosphate s... 132 4e-34
gb|APX64489.1| geranyl diphosphate synthase small subunit II [Ph... 131 6e-34
ref|XP_008813057.1| PREDICTED: heterodimeric geranylgeranyl pyro... 130 2e-33
ref|XP_009382057.1| PREDICTED: heterodimeric geranylgeranyl pyro... 127 2e-32
gb|PKA54008.1| Heterodimeric geranylgeranyl pyrophosphate syntha... 124 3e-31
ref|XP_010905229.1| PREDICTED: LOW QUALITY PROTEIN: heterodimeri... 124 6e-31
gb|KMZ68197.1| Heterodimeric geranyl(geranyl)diphosphate synthas... 120 1e-29
dbj|BAS80208.1| Os02g0668100, partial [Oryza sativa Japonica Group] 113 7e-28
pdb|5XN6|C Chain C, Heterodimer Crystal Structure Of Geranylgera... 113 2e-27
ref|XP_015626863.1| PREDICTED: heterodimeric geranylgeranyl pyro... 113 4e-27
dbj|BAJ91158.1| predicted protein [Hordeum vulgare subsp. vulgar... 113 4e-27
gb|EAY87007.1| hypothetical protein OsI_08402 [Oryza sativa Indi... 113 4e-27
dbj|BAF09598.2| Os02g0668100, partial [Oryza sativa Japonica Group] 113 4e-27
ref|XP_003570062.1| PREDICTED: heterodimeric geranylgeranyl pyro... 112 5e-27
ref|NP_001183942.1| putative geranylgeranyl pyrophosphate syntha... 112 7e-27
gb|KQL30876.1| hypothetical protein SETIT_019431mg [Setaria ital... 111 9e-27
gb|AJN91107.1| geranylgeranyl pyrophosphate synthase [Cymbopogon... 112 1e-26
>ref|XP_020094803.1| heterodimeric geranylgeranyl pyrophosphate synthase small subunit,
chloroplastic [Ananas comosus]
Length = 360
Score = 134 bits (337), Expect = 4e-35
Identities = 75/166 (45%), Positives = 92/166 (55%), Gaps = 17/166 (10%)
Frame = +1
Query: 7 DAAPSRRGLPSTHSLFGIDMAILAGDALLPLALHHIASASPSVLVEPAVILRVIQEITR- 183
DAAP RRG PST +LFG+ A+LAGDAL PL H+ + +P LV +LRV+ EI R
Sbjct: 138 DAAPLRRGRPSTPALFGVSTAVLAGDALFPLGFAHVIARTPPALVPRPALLRVLAEIARA 197
Query: 184 ----------------XXXXXXXXXXXIMEKKFGEMAECSAVCXXXXXXXXXXXXXXXXX 315
++EKKFGEMAECSAVC
Sbjct: 198 VGSTGMAAGQFLDLSGAAAGGEAEVLLVLEKKFGEMAECSAVCGGLLGGADEDDAAALRR 257
Query: 316 XXXXMGVLYQVADDVLMEEERGLGHNGSSSGKMRSNASVVKAMGMD 453
+GVLYQ+ DDVLME+E G+G NG S GKMRSNAS V+A+G+D
Sbjct: 258 YGRAVGVLYQLVDDVLMEDEEGVGSNGRSPGKMRSNASAVRALGID 303
>gb|OAY84582.1| Heterodimeric geranylgeranyl pyrophosphate synthase small subunit,
chloroplastic [Ananas comosus]
Length = 364
Score = 134 bits (337), Expect = 4e-35
Identities = 75/166 (45%), Positives = 92/166 (55%), Gaps = 17/166 (10%)
Frame = +1
Query: 7 DAAPSRRGLPSTHSLFGIDMAILAGDALLPLALHHIASASPSVLVEPAVILRVIQEITR- 183
DAAP RRG PST +LFG+ A+LAGDAL PL H+ + +P LV +LRV+ EI R
Sbjct: 142 DAAPLRRGRPSTPALFGVSTAVLAGDALFPLGFAHVIARTPPALVPRPALLRVLAEIARA 201
Query: 184 ----------------XXXXXXXXXXXIMEKKFGEMAECSAVCXXXXXXXXXXXXXXXXX 315
++EKKFGEMAECSAVC
Sbjct: 202 VGSTGMAAGQFLDLSGAAAGGEAEVLLVLEKKFGEMAECSAVCGGLLGGADEDDAAALRR 261
Query: 316 XXXXMGVLYQVADDVLMEEERGLGHNGSSSGKMRSNASVVKAMGMD 453
+GVLYQ+ DDVLME+E G+G NG S GKMRSNAS V+A+G+D
Sbjct: 262 YGRAVGVLYQLVDDVLMEDEEGVGSNGRSPGKMRSNASAVRALGID 307
>ref|XP_020688682.1| heterodimeric geranylgeranyl pyrophosphate synthase small subunit,
chloroplastic [Dendrobium catenatum]
gb|PKU77396.1| Heterodimeric geranylgeranyl pyrophosphate synthase small subunit,
chloroplastic [Dendrobium catenatum]
Length = 366
Score = 133 bits (334), Expect = 1e-34
Identities = 76/166 (45%), Positives = 93/166 (56%), Gaps = 17/166 (10%)
Frame = +1
Query: 7 DAAPSRRGLPSTHSLFGIDMAILAGDALLPLALHHIASASPSVLVEPAVILRVIQEITR- 183
DAAP RRG PS H+LFG+D+A+L GDAL PLA H+ + LV P ILRVI EI R
Sbjct: 139 DAAPLRRGRPSNHALFGVDLAVLTGDALFPLAFRHVVGHTSPSLVPPQTILRVIGEIART 198
Query: 184 ----------------XXXXXXXXXXXIMEKKFGEMAECSAVCXXXXXXXXXXXXXXXXX 315
++EKKFGEMAECSAVC
Sbjct: 199 VGSTGMAAGQMFDLLPAYGGEQEDAMIVLEKKFGEMAECSAVCGGYLGGAGEEEVERLRR 258
Query: 316 XXXXMGVLYQVADDVLMEEERGLGHNGSSSGKMRSNASVVKAMGMD 453
+GVLY+V DD+LMEEE+G+ NG SGKMRSNAS+V+ +GM+
Sbjct: 259 YGRAVGVLYEVVDDILMEEEKGVVGNG-RSGKMRSNASLVRTLGME 303
>ref|XP_020585412.1| heterodimeric geranylgeranyl pyrophosphate synthase small subunit,
chloroplastic [Phalaenopsis equestris]
Length = 367
Score = 132 bits (331), Expect = 4e-34
Identities = 75/165 (45%), Positives = 93/165 (56%), Gaps = 17/165 (10%)
Frame = +1
Query: 7 DAAPSRRGLPSTHSLFGIDMAILAGDALLPLALHHIASASPSVLVEPAVILRVIQEITR- 183
DAA RRG PS H++FG+D+A+L GDAL PLA H+ +P+ LV P IL+VI EI R
Sbjct: 146 DAAQLRRGRPSNHAVFGVDLAVLTGDALFPLAFSHVVGHTPASLVSPQAILQVIGEIART 205
Query: 184 ----------------XXXXXXXXXXXIMEKKFGEMAECSAVCXXXXXXXXXXXXXXXXX 315
++EKKFGEMAECSAVC
Sbjct: 206 VGSTGMAAGQMFDLLPEYGGEQEDVIVVLEKKFGEMAECSAVCGGLLGGADEEELERLRR 265
Query: 316 XXXXMGVLYQVADDVLMEEERGLGHNGSSSGKMRSNASVVKAMGM 450
+GVLY++ DDVL EEE+ +G NG SGKMRSNASVV+A+GM
Sbjct: 266 YGRAVGVLYEIVDDVLTEEEKSVGGNG-RSGKMRSNASVVRALGM 309
>gb|APX64489.1| geranyl diphosphate synthase small subunit II [Phalaenopsis
bellina]
Length = 361
Score = 131 bits (329), Expect = 6e-34
Identities = 75/164 (45%), Positives = 93/164 (56%), Gaps = 17/164 (10%)
Frame = +1
Query: 7 DAAPSRRGLPSTHSLFGIDMAILAGDALLPLALHHIASASPSVLVEPAVILRVIQEITR- 183
D+A RRG PS H++FG+ +A+L GDAL PLA H+ +P+ LV P ILRVI EI R
Sbjct: 136 DSAQLRRGRPSNHAVFGVGLAVLTGDALFPLAFSHVVGHTPASLVPPQAILRVIGEIART 195
Query: 184 ----------------XXXXXXXXXXXIMEKKFGEMAECSAVCXXXXXXXXXXXXXXXXX 315
++EKKFGEMAECSAVC
Sbjct: 196 VGSTGMAAGQMFDLLPEYGGEQEDVIVVLEKKFGEMAECSAVCGGLLGGADEEELERLRR 255
Query: 316 XXXXMGVLYQVADDVLMEEERGLGHNGSSSGKMRSNASVVKAMG 447
+GVLY+V DDVLMEE++G+G NG SGKMRSNASVV+A+G
Sbjct: 256 YGRAVGVLYEVVDDVLMEEDKGVGGNG-RSGKMRSNASVVRALG 298
>ref|XP_008813057.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic [Phoenix dactylifera]
Length = 375
Score = 130 bits (327), Expect = 2e-33
Identities = 75/167 (44%), Positives = 91/167 (54%), Gaps = 17/167 (10%)
Frame = +1
Query: 4 FDAAPSRRGLPSTHSLFGIDMAILAGDALLPLALHHIASASPSVLVEPAVILRVIQEITR 183
FDAAP RRG PSTH+ FG+DMA+LAGDAL PLA H+ + +P LV PA +LR + EI R
Sbjct: 134 FDAAPLRRGRPSTHARFGVDMAVLAGDALFPLAYSHVVARTPQDLVPPATLLRALAEIAR 193
Query: 184 -----------------XXXXXXXXXXXIMEKKFGEMAECSAVCXXXXXXXXXXXXXXXX 312
++EKKFGEMAECSA C
Sbjct: 194 AVGSTGMAAGQFLDITGAAAAGEANVVAVLEKKFGEMAECSAACGGILGGAGEEETEGLR 253
Query: 313 XXXXXMGVLYQVADDVLMEEERGLGHNGSSSGKMRSNASVVKAMGMD 453
+GVLY++ DD+LMEE S+GKMRSNASVV A+GMD
Sbjct: 254 RYGRAVGVLYELVDDILMEE-------AGSNGKMRSNASVVVALGMD 293
>ref|XP_009382057.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic [Musa acuminata subsp.
malaccensis]
Length = 352
Score = 127 bits (319), Expect = 2e-32
Identities = 78/167 (46%), Positives = 91/167 (54%), Gaps = 18/167 (10%)
Frame = +1
Query: 7 DAAPSRRGLPSTHSLFGIDMAILAGDALLPLALHHIASASPSV-LVEPAVILRVIQEITR 183
DAAP RRG PSTH+LFG+DMA+LAGDAL PLA HI + +PS LV +LRV+ EI R
Sbjct: 134 DAAPLRRGRPSTHALFGVDMAVLAGDALFPLAYQHIVARTPSPDLVSHVAVLRVLAEIAR 193
Query: 184 -----------------XXXXXXXXXXXIMEKKFGEMAECSAVCXXXXXXXXXXXXXXXX 312
++EKKFGEMAECSAVC
Sbjct: 194 AVGSTGMAAGQFLDLSCASCGGEEEVVIVLEKKFGEMAECSAVCGGLLGSASDEELEALR 253
Query: 313 XXXXXMGVLYQVADDVLMEEERGLGHNGSSSGKMRSNASVVKAMGMD 453
MGVLYQ+ DDVLME G +GKMRSNASVV A+GM+
Sbjct: 254 RYGRTMGVLYQLVDDVLMESNGG-------AGKMRSNASVVTALGME 293
>gb|PKA54008.1| Heterodimeric geranylgeranyl pyrophosphate synthase small subunit,
chloroplastic [Apostasia shenzhenica]
Length = 363
Score = 124 bits (311), Expect = 3e-31
Identities = 76/169 (44%), Positives = 94/169 (55%), Gaps = 20/169 (11%)
Frame = +1
Query: 7 DAAPSRRGLPSTHSLFGIDMAILAGDALLPLALHHIASASPSVLVEPAVILRVIQEITR- 183
D AP RRG PS H++FG+++A+LAGDAL PLA HI +PS LV PA +LRVI EI R
Sbjct: 147 DGAPLRRGRPSNHAVFGVEIALLAGDALFPLAFRHIVGRTPS-LVPPATVLRVIAEIART 205
Query: 184 -------------------XXXXXXXXXXXIMEKKFGEMAECSAVCXXXXXXXXXXXXXX 306
++EKKFGE+AE SA+C
Sbjct: 206 VGSTGMAAGQMLDLLPDAGIQAREPADVMLVLEKKFGELAETSALCGGLLGGANAEETAA 265
Query: 307 XXXXXXXMGVLYQVADDVLMEEERGLGHNGSSSGKMRSNASVVKAMGMD 453
+GVLY+V DD+LM E+RG G NG SGKM+SNASVV A+GMD
Sbjct: 266 LRRYGRAVGVLYEVVDDILM-EQRGAGSNG-HSGKMKSNASVVGALGMD 312
>ref|XP_010905229.1| PREDICTED: LOW QUALITY PROTEIN: heterodimeric geranylgeranyl
pyrophosphate synthase small subunit, chloroplastic
[Elaeis guineensis]
Length = 413
Score = 124 bits (311), Expect = 6e-31
Identities = 71/167 (42%), Positives = 89/167 (53%), Gaps = 17/167 (10%)
Frame = +1
Query: 4 FDAAPSRRGLPSTHSLFGIDMAILAGDALLPLALHHIASASPSVLVEPAVILRVIQEITR 183
FDAAP RRG PSTH+ FG+DMA+LAGDAL PLA H+ + +P LV PA +LR + EI R
Sbjct: 172 FDAAPLRRGRPSTHARFGVDMAVLAGDALFPLAFSHVVARTPRDLVPPATVLRALAEIAR 231
Query: 184 -----------------XXXXXXXXXXXIMEKKFGEMAECSAVCXXXXXXXXXXXXXXXX 312
++EKKFGEMAECSAVC
Sbjct: 232 AVGSTGMAAGQFLDLTGAAAAGEADVVAVLEKKFGEMAECSAVCGGILGGAGEEEAEGLR 291
Query: 313 XXXXXMGVLYQVADDVLMEEERGLGHNGSSSGKMRSNASVVKAMGMD 453
+GVLY++ DD+LM + S+GKMRSNA V A+GM+
Sbjct: 292 RYGRAVGVLYELVDDILMAD-------AGSNGKMRSNARAVAALGME 331
>gb|KMZ68197.1| Heterodimeric geranyl(geranyl)diphosphate synthase small subunit,
geranyl diphosphate synthase [Zostera marina]
Length = 351
Score = 120 bits (300), Expect = 1e-29
Identities = 76/164 (46%), Positives = 88/164 (53%), Gaps = 15/164 (9%)
Frame = +1
Query: 7 DAAPSRRGLPSTHSLFGIDMAILAGDALLPLALHHIASASPSVLVEPAVILRVIQEITR- 183
DAAP RRG P+ HS+FG ++A+LAGDAL P A HIAS +P LV ILRVI EI R
Sbjct: 151 DAAPLRRGRPTNHSVFGTEIALLAGDALFPHAFRHIASKTPYDLVSEETILRVITEIARA 210
Query: 184 --------------XXXXXXXXXXXIMEKKFGEMAECSAVCXXXXXXXXXXXXXXXXXXX 321
++E+KFGEMAECSAVC
Sbjct: 211 VGSKGMATGQLLDLGHNTGVTDVMEVLERKFGEMAECSAVCGGLLGGAEGEVLECLRRYG 270
Query: 322 XXMGVLYQVADDVLMEEERGLGHNGSSSGKMRSNASVVKAMGMD 453
+GVLYQV DD+LMEE G NG KMRSNASVV A GM+
Sbjct: 271 RVVGVLYQVVDDILMEE----GDNGE---KMRSNASVVGAYGME 307
>dbj|BAS80208.1| Os02g0668100, partial [Oryza sativa Japonica Group]
Length = 256
Score = 113 bits (282), Expect = 7e-28
Identities = 69/168 (41%), Positives = 89/168 (52%), Gaps = 18/168 (10%)
Frame = +1
Query: 4 FDAAPSRRGLPSTHSLFGIDMAILAGDALLPLALHHIASASPSVLVEP-AVILRVIQEIT 180
FDAAP+RRG PSTH+ +G DMA+LAGDAL PLA H+ + +PS P AV+LRV+ E+
Sbjct: 46 FDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTHVIAHTPSPDPVPHAVLLRVLGELA 105
Query: 181 R-----------------XXXXXXXXXXXIMEKKFGEMAECSAVCXXXXXXXXXXXXXXX 309
R ++ KKFGEMAECSA C
Sbjct: 106 RAVGSTGMAAGQFLDLAGATALGEAEVMKVLTKKFGEMAECSAACGAMLGGAGPDEEAAL 165
Query: 310 XXXXXXMGVLYQVADDVLMEEERGLGHNGSSSGKMRSNASVVKAMGMD 453
+GVLYQ+ DD+ + S +GKMRSNASV++A+GMD
Sbjct: 166 RRYGRTIGVLYQLVDDI---------RSASGNGKMRSNASVLRALGMD 204
>pdb|5XN6|C Chain C, Heterodimer Crystal Structure Of Geranylgeranyl
Diphosphate Synthases 1 With Ggpps Recruiting
Protein(osgrp) From Oryza Sativa
pdb|5XN6|D Chain D, Heterodimer Crystal Structure Of Geranylgeranyl
Diphosphate Synthases 1 With Ggpps Recruiting
Protein(osgrp) From Oryza Sativa
pdb|5XN6|F Chain F, Heterodimer Crystal Structure Of Geranylgeranyl
Diphosphate Synthases 1 With Ggpps Recruiting
Protein(osgrp) From Oryza Sativa
Length = 304
Score = 113 bits (282), Expect = 2e-27
Identities = 69/168 (41%), Positives = 89/168 (52%), Gaps = 18/168 (10%)
Frame = +1
Query: 4 FDAAPSRRGLPSTHSLFGIDMAILAGDALLPLALHHIASASPSVLVEP-AVILRVIQEIT 180
FDAAP+RRG PSTH+ +G DMA+LAGDAL PLA H+ + +PS P AV+LRV+ E+
Sbjct: 94 FDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTHVIAHTPSPDPVPHAVLLRVLGELA 153
Query: 181 R-----------------XXXXXXXXXXXIMEKKFGEMAECSAVCXXXXXXXXXXXXXXX 309
R ++ KKFGEMAECSA C
Sbjct: 154 RAVGSTGMAAGQFLDLAGATALGEAEVMKVLTKKFGEMAECSAACGAMLGGAGPDEEAAL 213
Query: 310 XXXXXXMGVLYQVADDVLMEEERGLGHNGSSSGKMRSNASVVKAMGMD 453
+GVLYQ+ DD+ + S +GKMRSNASV++A+GMD
Sbjct: 214 RRYGRTIGVLYQLVDDI---------RSASGNGKMRSNASVLRALGMD 252
>ref|XP_015626863.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic [Oryza sativa Japonica
Group]
ref|XP_015626864.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic [Oryza sativa Japonica
Group]
dbj|BAD28132.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica
Group]
dbj|BAG94618.1| unnamed protein product [Oryza sativa Japonica Group]
dbj|BAG97409.1| unnamed protein product [Oryza sativa Japonica Group]
dbj|BAG99244.1| unnamed protein product [Oryza sativa Japonica Group]
dbj|BAS80207.1| Os02g0668100 [Oryza sativa Japonica Group]
Length = 342
Score = 113 bits (282), Expect = 4e-27
Identities = 69/168 (41%), Positives = 89/168 (52%), Gaps = 18/168 (10%)
Frame = +1
Query: 4 FDAAPSRRGLPSTHSLFGIDMAILAGDALLPLALHHIASASPSVLVEP-AVILRVIQEIT 180
FDAAP+RRG PSTH+ +G DMA+LAGDAL PLA H+ + +PS P AV+LRV+ E+
Sbjct: 132 FDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTHVIAHTPSPDPVPHAVLLRVLGELA 191
Query: 181 R-----------------XXXXXXXXXXXIMEKKFGEMAECSAVCXXXXXXXXXXXXXXX 309
R ++ KKFGEMAECSA C
Sbjct: 192 RAVGSTGMAAGQFLDLAGATALGEAEVMKVLTKKFGEMAECSAACGAMLGGAGPDEEAAL 251
Query: 310 XXXXXXMGVLYQVADDVLMEEERGLGHNGSSSGKMRSNASVVKAMGMD 453
+GVLYQ+ DD+ + S +GKMRSNASV++A+GMD
Sbjct: 252 RRYGRTIGVLYQLVDDI---------RSASGNGKMRSNASVLRALGMD 290
>dbj|BAJ91158.1| predicted protein [Hordeum vulgare subsp. vulgare]
dbj|BAJ96219.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 342
Score = 113 bits (282), Expect = 4e-27
Identities = 69/168 (41%), Positives = 89/168 (52%), Gaps = 18/168 (10%)
Frame = +1
Query: 4 FDAAPSRRGLPSTHSLFGIDMAILAGDALLPLALHHIASASPSV-LVEPAVILRVIQEIT 180
FDAAP+RRG PSTH+ +G DMA+LAGDAL PLA H+ S +PS V AV+LRV+ E+
Sbjct: 132 FDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTHVISRTPSPDPVSHAVLLRVLAELA 191
Query: 181 R-----------------XXXXXXXXXXXIMEKKFGEMAECSAVCXXXXXXXXXXXXXXX 309
R ++ KKFGEMAECSA C
Sbjct: 192 RTVGSTGMAAGQFLDLAGASALGEAEVMQVLTKKFGEMAECSAACGAMLGGAGPDEEAAL 251
Query: 310 XXXXXXMGVLYQVADDVLMEEERGLGHNGSSSGKMRSNASVVKAMGMD 453
+GVLY++ DD+ + S +GKMRSNASV++A+GMD
Sbjct: 252 RRYGRAIGVLYELVDDM---------RSASGNGKMRSNASVLRALGMD 290
>gb|EAY87007.1| hypothetical protein OsI_08402 [Oryza sativa Indica Group]
Length = 344
Score = 113 bits (282), Expect = 4e-27
Identities = 69/168 (41%), Positives = 89/168 (52%), Gaps = 18/168 (10%)
Frame = +1
Query: 4 FDAAPSRRGLPSTHSLFGIDMAILAGDALLPLALHHIASASPSVLVEP-AVILRVIQEIT 180
FDAAP+RRG PSTH+ +G DMA+LAGDAL PLA H+ + +PS P AV+LRV+ E+
Sbjct: 134 FDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTHVIAHTPSPDPVPHAVLLRVLGELA 193
Query: 181 R-----------------XXXXXXXXXXXIMEKKFGEMAECSAVCXXXXXXXXXXXXXXX 309
R ++ KKFGEMAECSA C
Sbjct: 194 RAVGSTGMAAGQFLDLAGATALGEAEVMKVLTKKFGEMAECSAACGAMLGGAGPDEEAAL 253
Query: 310 XXXXXXMGVLYQVADDVLMEEERGLGHNGSSSGKMRSNASVVKAMGMD 453
+GVLYQ+ DD+ + S +GKMRSNASV++A+GMD
Sbjct: 254 RRYGRTIGVLYQLVDDI---------RSASGNGKMRSNASVLRALGMD 292
>dbj|BAF09598.2| Os02g0668100, partial [Oryza sativa Japonica Group]
Length = 349
Score = 113 bits (282), Expect = 4e-27
Identities = 69/168 (41%), Positives = 89/168 (52%), Gaps = 18/168 (10%)
Frame = +1
Query: 4 FDAAPSRRGLPSTHSLFGIDMAILAGDALLPLALHHIASASPSVLVEP-AVILRVIQEIT 180
FDAAP+RRG PSTH+ +G DMA+LAGDAL PLA H+ + +PS P AV+LRV+ E+
Sbjct: 139 FDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTHVIAHTPSPDPVPHAVLLRVLGELA 198
Query: 181 R-----------------XXXXXXXXXXXIMEKKFGEMAECSAVCXXXXXXXXXXXXXXX 309
R ++ KKFGEMAECSA C
Sbjct: 199 RAVGSTGMAAGQFLDLAGATALGEAEVMKVLTKKFGEMAECSAACGAMLGGAGPDEEAAL 258
Query: 310 XXXXXXMGVLYQVADDVLMEEERGLGHNGSSSGKMRSNASVVKAMGMD 453
+GVLYQ+ DD+ + S +GKMRSNASV++A+GMD
Sbjct: 259 RRYGRTIGVLYQLVDDI---------RSASGNGKMRSNASVLRALGMD 297
>ref|XP_003570062.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic [Brachypodium distachyon]
gb|KQK00699.1| hypothetical protein BRADI_3g51245v3 [Brachypodium distachyon]
Length = 346
Score = 112 bits (281), Expect = 5e-27
Identities = 68/168 (40%), Positives = 89/168 (52%), Gaps = 18/168 (10%)
Frame = +1
Query: 4 FDAAPSRRGLPSTHSLFGIDMAILAGDALLPLALHHIASASPSV-LVEPAVILRVIQEIT 180
FDAAP+RRG PSTH+ +G DMA+LAGDAL PLA H+ S +PS V AV+LRV+ E+
Sbjct: 136 FDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTHVISRTPSPNPVSHAVLLRVLAELA 195
Query: 181 R-----------------XXXXXXXXXXXIMEKKFGEMAECSAVCXXXXXXXXXXXXXXX 309
R ++ KKFGEMAECSA C
Sbjct: 196 RTVGSTGMAAGQFLDLAGATALGEREVMQVLTKKFGEMAECSAACGAMLAGAGPDEEASL 255
Query: 310 XXXXXXMGVLYQVADDVLMEEERGLGHNGSSSGKMRSNASVVKAMGMD 453
+GVLY++ DD+ + S +GKMRSNASV++++GMD
Sbjct: 256 RRYGRTIGVLYELVDDI---------RSASGNGKMRSNASVLRSLGMD 294
>ref|NP_001183942.1| putative geranylgeranyl pyrophosphate synthase 4 [Zea mays]
gb|ABQ85649.1| putative geranylgeranyl pyrophosphate synthase 4 [Zea mays]
gb|AQK73403.1| geranylgeranyl pyrophosphate synthase4 [Zea mays]
Length = 343
Score = 112 bits (280), Expect = 7e-27
Identities = 68/168 (40%), Positives = 89/168 (52%), Gaps = 18/168 (10%)
Frame = +1
Query: 4 FDAAPSRRGLPSTHSLFGIDMAILAGDALLPLALHHIASASPSVLVEP-AVILRVIQEIT 180
FDAAP+RRG PSTH+ +G DMA+LAGDAL PLA H+ S +PS P AV+LRV+ E+
Sbjct: 133 FDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTHVISHTPSPDPVPHAVLLRVLAELA 192
Query: 181 R-----------------XXXXXXXXXXXIMEKKFGEMAECSAVCXXXXXXXXXXXXXXX 309
R ++ KKFGEMAECSA C
Sbjct: 193 RAVGSTGMAAGQFLDLAGATALGEAEVMQVLTKKFGEMAECSAACGAMLGGAGPDEEAEL 252
Query: 310 XXXXXXMGVLYQVADDVLMEEERGLGHNGSSSGKMRSNASVVKAMGMD 453
+GVLY++ DD+ + S +GKMRSNASV++++GMD
Sbjct: 253 RRYGRTIGVLYELVDDI---------RSASGNGKMRSNASVLRSLGMD 291
>gb|KQL30876.1| hypothetical protein SETIT_019431mg [Setaria italica]
Length = 318
Score = 111 bits (278), Expect = 9e-27
Identities = 68/168 (40%), Positives = 88/168 (52%), Gaps = 18/168 (10%)
Frame = +1
Query: 4 FDAAPSRRGLPSTHSLFGIDMAILAGDALLPLALHHIASASPSVLVEP-AVILRVIQEIT 180
FDAAP+RRG PSTH+ FG DMA+LAGDAL PLA H+ + +PS P AV+LRV+ E+
Sbjct: 108 FDAAPTRRGRPSTHAAFGTDMAVLAGDALFPLAYTHVIAHTPSPDPVPHAVLLRVLAELA 167
Query: 181 R-----------------XXXXXXXXXXXIMEKKFGEMAECSAVCXXXXXXXXXXXXXXX 309
R ++ KKFGEMAECSA C
Sbjct: 168 RAVGSTGMAAGQFLDLAGATALGEAEVMRVLTKKFGEMAECSAACGAMLGGAGPDEEAAL 227
Query: 310 XXXXXXMGVLYQVADDVLMEEERGLGHNGSSSGKMRSNASVVKAMGMD 453
+GVLY++ DD+ + S +GKMR NASV++A+GMD
Sbjct: 228 RRYGRTIGVLYELVDDI---------RSASGNGKMRRNASVLRALGMD 266
>gb|AJN91107.1| geranylgeranyl pyrophosphate synthase [Cymbopogon winterianus]
Length = 344
Score = 112 bits (279), Expect = 1e-26
Identities = 69/168 (41%), Positives = 88/168 (52%), Gaps = 18/168 (10%)
Frame = +1
Query: 4 FDAAPSRRGLPSTHSLFGIDMAILAGDALLPLALHHIASASPSVLVEP-AVILRVIQEIT 180
FDAAP+RRG PSTH+ FG DMA+LAGDAL PLA H+ S +PS P AV+LRV+ E+
Sbjct: 134 FDAAPTRRGRPSTHAAFGTDMAVLAGDALFPLAYTHVISHTPSPDPVPHAVLLRVLAELA 193
Query: 181 R-----------------XXXXXXXXXXXIMEKKFGEMAECSAVCXXXXXXXXXXXXXXX 309
R ++ KKFGEMAECSA C
Sbjct: 194 RAVGSTGMAAGQFLDLAGATALGEAEVMQVLTKKFGEMAECSAACGAMLGGAGPDEEAAL 253
Query: 310 XXXXXXMGVLYQVADDVLMEEERGLGHNGSSSGKMRSNASVVKAMGMD 453
+GVLY++ DDV + S +GKMR NASV++++GMD
Sbjct: 254 RLYGRTIGVLYELVDDV---------RSASGNGKMRRNASVLRSLGMD 292