BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00016180
         (1058 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020255546.1| putative exosome complex component rrp40 iso...   434   e-151
ref|XP_020106314.1| putative exosome complex component rrp40 iso...   402   e-138
gb|OAY75957.1| putative exosome complex component rrp40 [Ananas ...   402   e-138
ref|XP_010924257.1| PREDICTED: putative exosome complex componen...   401   e-138
ref|XP_010251261.1| PREDICTED: putative exosome complex componen...   401   e-138
gb|PKA53541.1| hypothetical protein AXF42_Ash009037 [Apostasia s...   400   e-138
ref|XP_008806895.1| PREDICTED: putative exosome complex componen...   399   e-137
ref|XP_009402530.1| PREDICTED: putative exosome complex componen...   398   e-137
dbj|GAY38871.1| hypothetical protein CUMW_040050 [Citrus unshiu]      395   e-136
ref|XP_006439811.1| putative exosome complex component rrp40 [Ci...   395   e-136
gb|OVA07587.1| Exosome complex RNA-binding protein 1/RRP40/RRP4 ...   395   e-136
ref|XP_002282635.1| PREDICTED: putative exosome complex componen...   393   e-135
ref|XP_012080072.1| putative exosome complex component rrp40 [Ja...   392   e-135
ref|XP_006476772.1| PREDICTED: putative exosome complex componen...   392   e-134
ref|XP_020683631.1| putative exosome complex component rrp40 iso...   392   e-134
ref|XP_002318044.1| exonuclease-related family protein [Populus ...   391   e-134
gb|PNT10070.1| hypothetical protein POPTR_012G080300v3 [Populus ...   391   e-134
ref|XP_023923244.1| putative exosome complex component rrp40 [Qu...   389   e-133
ref|XP_006827742.1| putative exosome complex component rrp40 [Am...   388   e-133
ref|XP_011044305.1| PREDICTED: putative exosome complex componen...   387   e-133

>ref|XP_020255546.1| putative exosome complex component rrp40 isoform X1 [Asparagus
            officinalis]
 gb|ONK81783.1| uncharacterized protein A4U43_C01F32830 [Asparagus officinalis]
          Length = 242

 Score =  434 bits (1116), Expect = e-151
 Identities = 220/242 (90%), Positives = 229/242 (94%)
 Frame = +1

Query: 313  MEIDSSNSQPTNLLDKIVVPGDVVLDLSSKRNQTIKLGAGLRQECDTLSAMEAGKLRFLK 492
            MEIDSSNS PT+LL+KIVVPGDVVLDLS   NQTIKLGAGLRQECDT+S+M+AGKLR LK
Sbjct: 1    MEIDSSNSHPTSLLEKIVVPGDVVLDLSKLTNQTIKLGAGLRQECDTISSMKAGKLRHLK 60

Query: 493  PNKYWVESSHKRYVPSVEDTILGIVVDSKPDNFLVDIKGPSLAFLPVLAFEGGTRRNIPK 672
            PNKYW+ESS KRY P VED ILGIVVDSKPDNFL+DIKGPSLAFLPVLAFEGGTRRNIPK
Sbjct: 61   PNKYWIESSEKRYAPCVEDAILGIVVDSKPDNFLIDIKGPSLAFLPVLAFEGGTRRNIPK 120

Query: 673  FEVGTLLYVRVVKANSGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRMLLSSPTCP 852
            FEVG+LLYVRVVKANSGMN ELSCTDASGKAAEFGPLK GYMFETSTGLSRMLLSSPTCP
Sbjct: 121  FEVGSLLYVRVVKANSGMNAELSCTDASGKAAEFGPLKGGYMFETSTGLSRMLLSSPTCP 180

Query: 853  VLEALGKKLSFEIAVGLNGRVWVNASSPSTVVLVSNAISSSEFLSGVQQRIMVEKLLQRV 1032
            VLEALGKKLSFE AVGLNGRVWVNASSPSTV+LVSNAI SSEFLSGVQQRIMVEKLLQRV
Sbjct: 181  VLEALGKKLSFETAVGLNGRVWVNASSPSTVILVSNAIKSSEFLSGVQQRIMVEKLLQRV 240

Query: 1033 EQ 1038
            EQ
Sbjct: 241  EQ 242


>ref|XP_020106314.1| putative exosome complex component rrp40 isoform X1 [Ananas comosus]
          Length = 235

 Score =  402 bits (1033), Expect = e-138
 Identities = 199/232 (85%), Positives = 215/232 (92%)
 Frame = +1

Query: 340  PTNLLDKIVVPGDVVLDLSSKRNQTIKLGAGLRQECDTLSAMEAGKLRFLKPNKYWVESS 519
            PTNL+DK VVPGDVVLDLS+  NQTIKLGAGLRQ+CDT+SAM+AGKLR  KPNKYW+ESS
Sbjct: 4    PTNLVDKPVVPGDVVLDLSTMANQTIKLGAGLRQDCDTISAMKAGKLRLSKPNKYWIESS 63

Query: 520  HKRYVPSVEDTILGIVVDSKPDNFLVDIKGPSLAFLPVLAFEGGTRRNIPKFEVGTLLYV 699
             KRYVP VEDT+LGIVVD+KPDNFLVDIKGP+LAFLPVLAFEGGTRRNIPKFE+GTL+Y 
Sbjct: 64   QKRYVPCVEDTVLGIVVDTKPDNFLVDIKGPNLAFLPVLAFEGGTRRNIPKFEIGTLIYA 123

Query: 700  RVVKANSGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRMLLSSPTCPVLEALGKKL 879
            RVVKANS MNPELSCTDA GKAAEFGPLKDGYMFETSTGL+RMLLSSP CPVLEALGKKL
Sbjct: 124  RVVKANSIMNPELSCTDAGGKAAEFGPLKDGYMFETSTGLARMLLSSPMCPVLEALGKKL 183

Query: 880  SFEIAVGLNGRVWVNASSPSTVVLVSNAISSSEFLSGVQQRIMVEKLLQRVE 1035
            SFE AVGLNGRVWVNASSPS V+LVSNAI  SEFLSG QQRIMVEKL+ R++
Sbjct: 184  SFETAVGLNGRVWVNASSPSNVILVSNAIMRSEFLSGTQQRIMVEKLMDRLQ 235


>gb|OAY75957.1| putative exosome complex component rrp40 [Ananas comosus]
          Length = 235

 Score =  402 bits (1032), Expect = e-138
 Identities = 198/232 (85%), Positives = 215/232 (92%)
 Frame = +1

Query: 340  PTNLLDKIVVPGDVVLDLSSKRNQTIKLGAGLRQECDTLSAMEAGKLRFLKPNKYWVESS 519
            PTNL+DK VVPGDVVLDLS+  NQTIKLGAGLRQ+CDT+SAM+AGKLR  KPNKYW+ESS
Sbjct: 4    PTNLVDKPVVPGDVVLDLSTMANQTIKLGAGLRQDCDTISAMKAGKLRLSKPNKYWIESS 63

Query: 520  HKRYVPSVEDTILGIVVDSKPDNFLVDIKGPSLAFLPVLAFEGGTRRNIPKFEVGTLLYV 699
             KRYVP VEDT+LGIVVD+KPDNFLVD+KGP+LAFLPVLAFEGGTRRNIPKFE+GTL+Y 
Sbjct: 64   QKRYVPCVEDTVLGIVVDTKPDNFLVDVKGPNLAFLPVLAFEGGTRRNIPKFEIGTLIYA 123

Query: 700  RVVKANSGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRMLLSSPTCPVLEALGKKL 879
            RVVKANS MNPELSCTDA GKAAEFGPLKDGYMFETSTGL+RMLLSSP CPVLEALGKKL
Sbjct: 124  RVVKANSIMNPELSCTDAGGKAAEFGPLKDGYMFETSTGLARMLLSSPMCPVLEALGKKL 183

Query: 880  SFEIAVGLNGRVWVNASSPSTVVLVSNAISSSEFLSGVQQRIMVEKLLQRVE 1035
            SFE AVGLNGRVWVNASSPS V+LVSNAI  SEFLSG QQRIMVEKL+ R++
Sbjct: 184  SFETAVGLNGRVWVNASSPSNVILVSNAIMRSEFLSGTQQRIMVEKLMDRLQ 235


>ref|XP_010924257.1| PREDICTED: putative exosome complex component rrp40 [Elaeis
            guineensis]
          Length = 242

 Score =  401 bits (1031), Expect = e-138
 Identities = 195/242 (80%), Positives = 223/242 (92%), Gaps = 1/242 (0%)
 Frame = +1

Query: 313  MEIDSSNSQP-TNLLDKIVVPGDVVLDLSSKRNQTIKLGAGLRQECDTLSAMEAGKLRFL 489
            M+++  ++ P T+ +D+IV+PGD VLDLS+  NQTIKLG GLRQ+CDT+S M+AGKLR  
Sbjct: 1    MDVEKPSNPPLTSCIDRIVLPGDTVLDLSTMANQTIKLGEGLRQDCDTISVMKAGKLRLS 60

Query: 490  KPNKYWVESSHKRYVPSVEDTILGIVVDSKPDNFLVDIKGPSLAFLPVLAFEGGTRRNIP 669
            KPNKYWVESSHKRYVP  EDTILGIVVDSKPDNFLVDIKGP+LA LPVLAFEGGTRRNIP
Sbjct: 61   KPNKYWVESSHKRYVPCAEDTILGIVVDSKPDNFLVDIKGPTLALLPVLAFEGGTRRNIP 120

Query: 670  KFEVGTLLYVRVVKANSGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRMLLSSPTC 849
            KFEVGTLLYVRVVKAN+ MNPELSCTDA+GKAAEFGPLKDGYMFETSTGL+RMLL SPTC
Sbjct: 121  KFEVGTLLYVRVVKANNSMNPELSCTDATGKAAEFGPLKDGYMFETSTGLARMLLGSPTC 180

Query: 850  PVLEALGKKLSFEIAVGLNGRVWVNASSPSTVVLVSNAISSSEFLSGVQQRIMVEKLLQR 1029
            P+LEALGKKLSFEIA+GLNGRVWVNASSP+T+++VSNAI +SEFLSG QQRIMVEKL+Q+
Sbjct: 181  PILEALGKKLSFEIAIGLNGRVWVNASSPATIIVVSNAIMNSEFLSGTQQRIMVEKLMQK 240

Query: 1030 VE 1035
            ++
Sbjct: 241  LQ 242


>ref|XP_010251261.1| PREDICTED: putative exosome complex component rrp40 isoform X1
            [Nelumbo nucifera]
          Length = 243

 Score =  401 bits (1030), Expect = e-138
 Identities = 201/238 (84%), Positives = 219/238 (92%)
 Frame = +1

Query: 322  DSSNSQPTNLLDKIVVPGDVVLDLSSKRNQTIKLGAGLRQECDTLSAMEAGKLRFLKPNK 501
            D S +  T+ +D+IVVPGDVVLDLSS  NQTIKLG GLRQ+CDT+S M+AGKL+F KPNK
Sbjct: 3    DRSLNLTTSFIDQIVVPGDVVLDLSSMSNQTIKLGGGLRQDCDTISVMKAGKLKFSKPNK 62

Query: 502  YWVESSHKRYVPSVEDTILGIVVDSKPDNFLVDIKGPSLAFLPVLAFEGGTRRNIPKFEV 681
            YWVESS KRYVP VEDTILG VVDSK DNFLVDIKGP+LAFLPVLAFEGGTRRNIPK+E 
Sbjct: 63   YWVESSQKRYVPCVEDTILGTVVDSKADNFLVDIKGPTLAFLPVLAFEGGTRRNIPKYEA 122

Query: 682  GTLLYVRVVKANSGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRMLLSSPTCPVLE 861
            GTLLYVRVVKAN+GMNPELSCTDASGKAAEFG LKDGYMFETSTGLSRMLLSSPTCPVLE
Sbjct: 123  GTLLYVRVVKANAGMNPELSCTDASGKAAEFGVLKDGYMFETSTGLSRMLLSSPTCPVLE 182

Query: 862  ALGKKLSFEIAVGLNGRVWVNASSPSTVVLVSNAISSSEFLSGVQQRIMVEKLLQRVE 1035
            ALGKKLSFEIA+GLNGRVWVNA+SPSTV+LVSNAI +SE LSGVQQRIMVEKL+Q+ +
Sbjct: 183  ALGKKLSFEIAIGLNGRVWVNAASPSTVILVSNAIMNSESLSGVQQRIMVEKLMQKFQ 240


>gb|PKA53541.1| hypothetical protein AXF42_Ash009037 [Apostasia shenzhenica]
          Length = 242

 Score =  400 bits (1028), Expect = e-138
 Identities = 195/241 (80%), Positives = 221/241 (91%)
 Frame = +1

Query: 313  MEIDSSNSQPTNLLDKIVVPGDVVLDLSSKRNQTIKLGAGLRQECDTLSAMEAGKLRFLK 492
            ME++ S S PT+L+DK V PGD++LDL+S  +QTIKLGAGLRQ+CD +SA++ G LRF K
Sbjct: 1    MEVEKSTSLPTSLIDKSVFPGDIILDLTSMPDQTIKLGAGLRQDCDVVSAVKYGILRFKK 60

Query: 493  PNKYWVESSHKRYVPSVEDTILGIVVDSKPDNFLVDIKGPSLAFLPVLAFEGGTRRNIPK 672
            PNKYWVESS KRYVPS EDT+LG+V+D+KPDNFLVDIKGP +AFLPVLAFEGGTRRNIPK
Sbjct: 61   PNKYWVESSQKRYVPSAEDTVLGVVMDAKPDNFLVDIKGPMIAFLPVLAFEGGTRRNIPK 120

Query: 673  FEVGTLLYVRVVKANSGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRMLLSSPTCP 852
            FE+GTLLYVRVVKAN+ MNPELSCTDASGKAAEFGPL+DGYMFETSTGL+RMLLSSPTCP
Sbjct: 121  FEIGTLLYVRVVKANNCMNPELSCTDASGKAAEFGPLRDGYMFETSTGLARMLLSSPTCP 180

Query: 853  VLEALGKKLSFEIAVGLNGRVWVNASSPSTVVLVSNAISSSEFLSGVQQRIMVEKLLQRV 1032
            VLEALGKKLSFEIAVGLNGRVWVNASSPSTV+L+SNAI  SEFLS  QQ+IMVEKL+QR 
Sbjct: 181  VLEALGKKLSFEIAVGLNGRVWVNASSPSTVILISNAIMRSEFLSAAQQKIMVEKLMQRF 240

Query: 1033 E 1035
            +
Sbjct: 241  Q 241


>ref|XP_008806895.1| PREDICTED: putative exosome complex component rrp40 [Phoenix
            dactylifera]
          Length = 242

 Score =  399 bits (1024), Expect = e-137
 Identities = 198/242 (81%), Positives = 220/242 (90%), Gaps = 1/242 (0%)
 Frame = +1

Query: 313  MEIDSSNSQPTN-LLDKIVVPGDVVLDLSSKRNQTIKLGAGLRQECDTLSAMEAGKLRFL 489
            M+++  +  P N  +D++VVPGD VLDLS+  NQTIKLG GLRQ+ D +S M+AGKLR  
Sbjct: 1    MKVEQPSDPPLNSCVDQLVVPGDTVLDLSTMSNQTIKLGEGLRQDSDKISVMKAGKLRLS 60

Query: 490  KPNKYWVESSHKRYVPSVEDTILGIVVDSKPDNFLVDIKGPSLAFLPVLAFEGGTRRNIP 669
            KPNKYWVESSHKRYVP VEDTILGIVVDSKPDNFLVDIKGP+LAFLPVLAFEGGTRRNIP
Sbjct: 61   KPNKYWVESSHKRYVPCVEDTILGIVVDSKPDNFLVDIKGPTLAFLPVLAFEGGTRRNIP 120

Query: 670  KFEVGTLLYVRVVKANSGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRMLLSSPTC 849
            KFEVGTLLYVRVVKAN+ MNPELSCTDASGKAAEFGPLKDGYMFETSTGL+RMLLSSPTC
Sbjct: 121  KFEVGTLLYVRVVKANNSMNPELSCTDASGKAAEFGPLKDGYMFETSTGLARMLLSSPTC 180

Query: 850  PVLEALGKKLSFEIAVGLNGRVWVNASSPSTVVLVSNAISSSEFLSGVQQRIMVEKLLQR 1029
            PVLEALGKKLSFEIA+GLNGRVWVNASSP+T V++SNAI  SEFLSG QQRIMVEKL+Q+
Sbjct: 181  PVLEALGKKLSFEIAIGLNGRVWVNASSPATTVILSNAIMKSEFLSGTQQRIMVEKLMQK 240

Query: 1030 VE 1035
            ++
Sbjct: 241  LQ 242


>ref|XP_009402530.1| PREDICTED: putative exosome complex component rrp40 [Musa acuminata
            subsp. malaccensis]
          Length = 241

 Score =  398 bits (1022), Expect = e-137
 Identities = 195/241 (80%), Positives = 220/241 (91%)
 Frame = +1

Query: 313  MEIDSSNSQPTNLLDKIVVPGDVVLDLSSKRNQTIKLGAGLRQECDTLSAMEAGKLRFLK 492
            M  ++S++ PT+L+D+ VVPGD VLDL++  NQTIKLGAGLRQ+CDT+S M+AGKLR  K
Sbjct: 1    MNAETSDAPPTSLVDRTVVPGDTVLDLTAMANQTIKLGAGLRQDCDTISVMKAGKLRLSK 60

Query: 493  PNKYWVESSHKRYVPSVEDTILGIVVDSKPDNFLVDIKGPSLAFLPVLAFEGGTRRNIPK 672
            PNKYWVESSHKRY P VEDT+LGIVVD KPDNFLVDIK P+LAFLPVLAFEGGTRRNIPK
Sbjct: 61   PNKYWVESSHKRYAPCVEDTVLGIVVDCKPDNFLVDIKAPTLAFLPVLAFEGGTRRNIPK 120

Query: 673  FEVGTLLYVRVVKANSGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRMLLSSPTCP 852
            FE+GTLLYVRVVKAN+ MNPELSC D +GKA+EFG LKDGYMFETSTGLSRMLLSSPTCP
Sbjct: 121  FEIGTLLYVRVVKANNSMNPELSCVDETGKASEFGQLKDGYMFETSTGLSRMLLSSPTCP 180

Query: 853  VLEALGKKLSFEIAVGLNGRVWVNASSPSTVVLVSNAISSSEFLSGVQQRIMVEKLLQRV 1032
            VLEALGK LS+EIAVGLNGRVWVNASSPSTV+LVSNAI +SE LSGVQQ+IMVEKL+QR+
Sbjct: 181  VLEALGKTLSYEIAVGLNGRVWVNASSPSTVILVSNAIMNSESLSGVQQKIMVEKLMQRL 240

Query: 1033 E 1035
            +
Sbjct: 241  Q 241


>dbj|GAY38871.1| hypothetical protein CUMW_040050 [Citrus unshiu]
          Length = 238

 Score =  395 bits (1016), Expect = e-136
 Identities = 197/230 (85%), Positives = 214/230 (93%)
 Frame = +1

Query: 346  NLLDKIVVPGDVVLDLSSKRNQTIKLGAGLRQECDTLSAMEAGKLRFLKPNKYWVESSHK 525
            NL+DKIVVPGDVVLDLSS  NQTIKLG GLRQECD++S ++AGKLRF KPNKYWVESSHK
Sbjct: 9    NLVDKIVVPGDVVLDLSSMTNQTIKLGGGLRQECDSVSVIKAGKLRFSKPNKYWVESSHK 68

Query: 526  RYVPSVEDTILGIVVDSKPDNFLVDIKGPSLAFLPVLAFEGGTRRNIPKFEVGTLLYVRV 705
            RYVP VEDT+LGIVVD K DNF VDI+GP++AFLPVLAFEGGTRRNIPKFE+G+LLYVRV
Sbjct: 69   RYVPCVEDTVLGIVVDCKADNFFVDIRGPTIAFLPVLAFEGGTRRNIPKFEIGSLLYVRV 128

Query: 706  VKANSGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRMLLSSPTCPVLEALGKKLSF 885
            VKAN GMNPELSCTDASGKAAEFG LKDGYMFETSTGLSRMLLSSPTCPVLE LGK+LSF
Sbjct: 129  VKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSTGLSRMLLSSPTCPVLEELGKQLSF 188

Query: 886  EIAVGLNGRVWVNASSPSTVVLVSNAISSSEFLSGVQQRIMVEKLLQRVE 1035
            EIAVGLNGRVWVNA SPSTVVLVSNAI +SE LS VQQ+IMV+KLLQR++
Sbjct: 189  EIAVGLNGRVWVNAESPSTVVLVSNAIMNSESLSAVQQKIMVDKLLQRIQ 238


>ref|XP_006439811.1| putative exosome complex component rrp40 [Citrus clementina]
 ref|XP_006439812.1| putative exosome complex component rrp40 [Citrus clementina]
 gb|ESR53051.1| hypothetical protein CICLE_v10021986mg [Citrus clementina]
 gb|ESR53052.1| hypothetical protein CICLE_v10021986mg [Citrus clementina]
          Length = 238

 Score =  395 bits (1016), Expect = e-136
 Identities = 197/231 (85%), Positives = 215/231 (93%)
 Frame = +1

Query: 343  TNLLDKIVVPGDVVLDLSSKRNQTIKLGAGLRQECDTLSAMEAGKLRFLKPNKYWVESSH 522
            TNL+DKIVVPGDVVLDLSS  NQTIKLG GLRQECD++S ++AGKLRF KPNKYWVESSH
Sbjct: 8    TNLVDKIVVPGDVVLDLSSMTNQTIKLGGGLRQECDSVSVIKAGKLRFSKPNKYWVESSH 67

Query: 523  KRYVPSVEDTILGIVVDSKPDNFLVDIKGPSLAFLPVLAFEGGTRRNIPKFEVGTLLYVR 702
            KRYVP VEDT+LGIVVD K DNF VDI+GP++AFLPVLAFEGGTRRNIPKFE+G+LLYVR
Sbjct: 68   KRYVPCVEDTVLGIVVDCKADNFFVDIRGPTIAFLPVLAFEGGTRRNIPKFEIGSLLYVR 127

Query: 703  VVKANSGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRMLLSSPTCPVLEALGKKLS 882
            VVKAN GMNPELSCTDASGKAAEFG LKDGYMFETS+GLSRMLLSSPTCPVLE LGK+LS
Sbjct: 128  VVKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSSGLSRMLLSSPTCPVLEELGKQLS 187

Query: 883  FEIAVGLNGRVWVNASSPSTVVLVSNAISSSEFLSGVQQRIMVEKLLQRVE 1035
            FEIAVGLNGRVWVNA SPSTVVLVSNAI +SE LS VQQ+IMV+KLLQR++
Sbjct: 188  FEIAVGLNGRVWVNAESPSTVVLVSNAIMNSESLSAVQQKIMVDKLLQRIK 238


>gb|OVA07587.1| Exosome complex RNA-binding protein 1/RRP40/RRP4 [Macleaya cordata]
          Length = 241

 Score =  395 bits (1016), Expect = e-136
 Identities = 198/242 (81%), Positives = 220/242 (90%)
 Frame = +1

Query: 310  IMEIDSSNSQPTNLLDKIVVPGDVVLDLSSKRNQTIKLGAGLRQECDTLSAMEAGKLRFL 489
            ++E   S+SQ T L+DKIVVPGDVVLDLS   NQTIKLG GLRQ+CD +S M++GKLRF 
Sbjct: 1    MVEEKHSDSQ-TTLVDKIVVPGDVVLDLSKMANQTIKLGDGLRQDCDAISVMKSGKLRFS 59

Query: 490  KPNKYWVESSHKRYVPSVEDTILGIVVDSKPDNFLVDIKGPSLAFLPVLAFEGGTRRNIP 669
            KPNKYWVESS KRYVP  EDT+LGIVVD + DNFLVDIKGP+LAFLPVLAFEGGTRRNIP
Sbjct: 60   KPNKYWVESSQKRYVPCAEDTVLGIVVDQRADNFLVDIKGPALAFLPVLAFEGGTRRNIP 119

Query: 670  KFEVGTLLYVRVVKANSGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRMLLSSPTC 849
            KFEVGTL+YVRVVKAN+GMNPELSCTDASGKAAEFGPLKDGY FE+STGLSRMLLSSPTC
Sbjct: 120  KFEVGTLIYVRVVKANTGMNPELSCTDASGKAAEFGPLKDGYTFESSTGLSRMLLSSPTC 179

Query: 850  PVLEALGKKLSFEIAVGLNGRVWVNASSPSTVVLVSNAISSSEFLSGVQQRIMVEKLLQR 1029
            PVLEALGKKLSFEIAVGLNGRVWVNA SPSTV+LV+NAI SSE L+ VQQR+MV+KL+QR
Sbjct: 180  PVLEALGKKLSFEIAVGLNGRVWVNAESPSTVILVANAIMSSESLTAVQQRVMVDKLMQR 239

Query: 1030 VE 1035
            ++
Sbjct: 240  IQ 241


>ref|XP_002282635.1| PREDICTED: putative exosome complex component rrp40 isoform X1 [Vitis
            vinifera]
 emb|CBI15022.3| unnamed protein product, partial [Vitis vinifera]
          Length = 237

 Score =  393 bits (1009), Expect = e-135
 Identities = 194/235 (82%), Positives = 216/235 (91%)
 Frame = +1

Query: 331  NSQPTNLLDKIVVPGDVVLDLSSKRNQTIKLGAGLRQECDTLSAMEAGKLRFLKPNKYWV 510
            ++ P + +D++VVPGDVVLDLS   NQTIKLG GL Q+CD ++  +AG+LRF KPNKYWV
Sbjct: 3    DNTPASFVDQLVVPGDVVLDLSKMGNQTIKLGGGLHQDCDAITVTKAGRLRFSKPNKYWV 62

Query: 511  ESSHKRYVPSVEDTILGIVVDSKPDNFLVDIKGPSLAFLPVLAFEGGTRRNIPKFEVGTL 690
            ESS KRYVP VEDT+LGIVVDSK DNFLVDIKGP+LAFLPVLAFEGGTRRNIPKFE GTL
Sbjct: 63   ESSQKRYVPCVEDTVLGIVVDSKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTL 122

Query: 691  LYVRVVKANSGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRMLLSSPTCPVLEALG 870
            LYVRVVKAN+GMNPELSCTDASGKAAEFGPLKDGYMFE+STGLSRMLLSSPTCPVLEALG
Sbjct: 123  LYVRVVKANTGMNPELSCTDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPTCPVLEALG 182

Query: 871  KKLSFEIAVGLNGRVWVNASSPSTVVLVSNAISSSEFLSGVQQRIMVEKLLQRVE 1035
            KKLSFEIAVGLNGRVWVNASSPSTV+LV+NAI +SE LS VQQ+IMV+KLLQR++
Sbjct: 183  KKLSFEIAVGLNGRVWVNASSPSTVILVANAIMNSESLSVVQQKIMVDKLLQRIQ 237


>ref|XP_012080072.1| putative exosome complex component rrp40 [Jatropha curcas]
 gb|KDP31104.1| hypothetical protein JCGZ_11480 [Jatropha curcas]
          Length = 241

 Score =  392 bits (1008), Expect = e-135
 Identities = 193/235 (82%), Positives = 216/235 (91%)
 Frame = +1

Query: 331  NSQPTNLLDKIVVPGDVVLDLSSKRNQTIKLGAGLRQECDTLSAMEAGKLRFLKPNKYWV 510
            +S PT+L+DK+VVPGDVV+DLS+  NQTIKLG GLRQ+CD +S  ++GKLRF KPNKYWV
Sbjct: 6    SSSPTSLVDKLVVPGDVVIDLSTMSNQTIKLGGGLRQDCDAISVTKSGKLRFSKPNKYWV 65

Query: 511  ESSHKRYVPSVEDTILGIVVDSKPDNFLVDIKGPSLAFLPVLAFEGGTRRNIPKFEVGTL 690
            E S KRYVP  ED++LGIVVDSK +NFLVDIKGP+LAFLPVLAFEGGTRRNIPKFEVGTL
Sbjct: 66   EGSQKRYVPCAEDSVLGIVVDSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPKFEVGTL 125

Query: 691  LYVRVVKANSGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRMLLSSPTCPVLEALG 870
            LYVRVVKAN GMNPELSCTDASGKAAEFG LKDGYMFE STGLSRMLLSSPTCPVLEALG
Sbjct: 126  LYVRVVKANPGMNPELSCTDASGKAAEFGVLKDGYMFECSTGLSRMLLSSPTCPVLEALG 185

Query: 871  KKLSFEIAVGLNGRVWVNASSPSTVVLVSNAISSSEFLSGVQQRIMVEKLLQRVE 1035
             KLSFEIAVGLNGRVWVNA+SPSTV++V+NAI +SE LSGVQQ+IMVEKLLQ+++
Sbjct: 186  NKLSFEIAVGLNGRVWVNATSPSTVIIVANAIMNSETLSGVQQKIMVEKLLQKIQ 240


>ref|XP_006476772.1| PREDICTED: putative exosome complex component rrp40 [Citrus sinensis]
 ref|XP_006476773.1| PREDICTED: putative exosome complex component rrp40 [Citrus sinensis]
 ref|XP_015385315.1| PREDICTED: putative exosome complex component rrp40 [Citrus sinensis]
 ref|XP_015385316.1| PREDICTED: putative exosome complex component rrp40 [Citrus sinensis]
 gb|KDO69672.1| hypothetical protein CISIN_1g026458mg [Citrus sinensis]
 gb|KDO69673.1| hypothetical protein CISIN_1g026458mg [Citrus sinensis]
          Length = 238

 Score =  392 bits (1007), Expect = e-134
 Identities = 196/230 (85%), Positives = 213/230 (92%)
 Frame = +1

Query: 346  NLLDKIVVPGDVVLDLSSKRNQTIKLGAGLRQECDTLSAMEAGKLRFLKPNKYWVESSHK 525
            NL+DKIVVPGDVVLDLSS  NQTIKLG GLRQECD++S ++AGKLRF KPNKYWVESS K
Sbjct: 9    NLVDKIVVPGDVVLDLSSMTNQTIKLGGGLRQECDSVSVIKAGKLRFSKPNKYWVESSQK 68

Query: 526  RYVPSVEDTILGIVVDSKPDNFLVDIKGPSLAFLPVLAFEGGTRRNIPKFEVGTLLYVRV 705
            RYVP VEDT+LGIVVD K DNF VDI+GP++AFLPVLAFEGGTRRNIPKFE+G+LLYVRV
Sbjct: 69   RYVPCVEDTVLGIVVDCKADNFFVDIRGPTIAFLPVLAFEGGTRRNIPKFEIGSLLYVRV 128

Query: 706  VKANSGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRMLLSSPTCPVLEALGKKLSF 885
            VKAN GMNPELSCTDASGKAAEFG LKDGYMFETSTGLSRMLLSSPTCPVLE LGK+LSF
Sbjct: 129  VKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSTGLSRMLLSSPTCPVLEELGKQLSF 188

Query: 886  EIAVGLNGRVWVNASSPSTVVLVSNAISSSEFLSGVQQRIMVEKLLQRVE 1035
            EIAVGLNGRVWVNA SPSTVVLVSNAI +SE LS VQQ+IMV+KLLQR++
Sbjct: 189  EIAVGLNGRVWVNAESPSTVVLVSNAIMNSESLSAVQQKIMVDKLLQRIK 238


>ref|XP_020683631.1| putative exosome complex component rrp40 isoform X1 [Dendrobium
            catenatum]
 ref|XP_020683634.1| putative exosome complex component rrp40 isoform X1 [Dendrobium
            catenatum]
 ref|XP_020683635.1| putative exosome complex component rrp40 isoform X2 [Dendrobium
            catenatum]
 gb|PKU69756.1| hypothetical protein MA16_Dca017973 [Dendrobium catenatum]
          Length = 242

 Score =  392 bits (1006), Expect = e-134
 Identities = 193/241 (80%), Positives = 222/241 (92%)
 Frame = +1

Query: 313  MEIDSSNSQPTNLLDKIVVPGDVVLDLSSKRNQTIKLGAGLRQECDTLSAMEAGKLRFLK 492
            ME+++S+S   +L+DK VVPGD+VLDL+S  +QTI+LGAGLRQ  D LS ++AGKL+F K
Sbjct: 1    MEVETSSSSTASLVDKAVVPGDIVLDLTSMSDQTIRLGAGLRQYSDVLSVVKAGKLKFKK 60

Query: 493  PNKYWVESSHKRYVPSVEDTILGIVVDSKPDNFLVDIKGPSLAFLPVLAFEGGTRRNIPK 672
            PNKYWVESS KRY PSVEDT+LGIVVD++ DNFLVDIKGP+LAFLPVLAFEGGTRRNIPK
Sbjct: 61   PNKYWVESSQKRYAPSVEDTVLGIVVDARADNFLVDIKGPTLAFLPVLAFEGGTRRNIPK 120

Query: 673  FEVGTLLYVRVVKANSGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRMLLSSPTCP 852
            FE+GTLLYVRVVKANS MNPELSCTDASGKAAEFG LK+GYMF+TSTGL+RMLLSSPTCP
Sbjct: 121  FEIGTLLYVRVVKANSCMNPELSCTDASGKAAEFGSLKEGYMFDTSTGLARMLLSSPTCP 180

Query: 853  VLEALGKKLSFEIAVGLNGRVWVNASSPSTVVLVSNAISSSEFLSGVQQRIMVEKLLQRV 1032
            +LEALG+KLS+EIAVGLNGRVWVNASSPSTV+LVSNAI  SEFLS VQQ+I+VEKL+QRV
Sbjct: 181  ILEALGRKLSYEIAVGLNGRVWVNASSPSTVILVSNAIMRSEFLSDVQQKILVEKLMQRV 240

Query: 1033 E 1035
            +
Sbjct: 241  Q 241


>ref|XP_002318044.1| exonuclease-related family protein [Populus trichocarpa]
 gb|ABK93275.1| unknown [Populus trichocarpa]
 gb|PNT10068.1| hypothetical protein POPTR_012G080300v3 [Populus trichocarpa]
          Length = 242

 Score =  391 bits (1004), Expect = e-134
 Identities = 195/241 (80%), Positives = 216/241 (89%)
 Frame = +1

Query: 313  MEIDSSNSQPTNLLDKIVVPGDVVLDLSSKRNQTIKLGAGLRQECDTLSAMEAGKLRFLK 492
            ME  SS S P   +D +VVPGDVV+DLSS  NQTIKLG+GLRQ+CD +S M+AGKLRF K
Sbjct: 1    MESKSSGS-PATFIDNLVVPGDVVVDLSSMTNQTIKLGSGLRQDCDAISVMKAGKLRFSK 59

Query: 493  PNKYWVESSHKRYVPSVEDTILGIVVDSKPDNFLVDIKGPSLAFLPVLAFEGGTRRNIPK 672
            PNKYWVE+S KRYVP  ED++LGIVVDSK DNFL+DIKGP+LAFLPVLAFEGGTRRNIPK
Sbjct: 60   PNKYWVETSQKRYVPCAEDSVLGIVVDSKSDNFLIDIKGPALAFLPVLAFEGGTRRNIPK 119

Query: 673  FEVGTLLYVRVVKANSGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRMLLSSPTCP 852
            FE GTLLYVRVVKAN GMNPELSCTDASGKAAEFG LKDGYMFE STGLSRMLLSSPTCP
Sbjct: 120  FEAGTLLYVRVVKANPGMNPELSCTDASGKAAEFGALKDGYMFECSTGLSRMLLSSPTCP 179

Query: 853  VLEALGKKLSFEIAVGLNGRVWVNASSPSTVVLVSNAISSSEFLSGVQQRIMVEKLLQRV 1032
            VLEALGKKLSFEIAVGLNGRVWVNA+SPS V++V+NAI +SE LSGVQQ+IM EKLLQ++
Sbjct: 180  VLEALGKKLSFEIAVGLNGRVWVNANSPSIVIIVANAIMNSETLSGVQQKIMAEKLLQKI 239

Query: 1033 E 1035
            +
Sbjct: 240  Q 240


>gb|PNT10070.1| hypothetical protein POPTR_012G080300v3 [Populus trichocarpa]
          Length = 246

 Score =  391 bits (1004), Expect = e-134
 Identities = 195/241 (80%), Positives = 216/241 (89%)
 Frame = +1

Query: 313  MEIDSSNSQPTNLLDKIVVPGDVVLDLSSKRNQTIKLGAGLRQECDTLSAMEAGKLRFLK 492
            ME  SS S P   +D +VVPGDVV+DLSS  NQTIKLG+GLRQ+CD +S M+AGKLRF K
Sbjct: 1    MESKSSGS-PATFIDNLVVPGDVVVDLSSMTNQTIKLGSGLRQDCDAISVMKAGKLRFSK 59

Query: 493  PNKYWVESSHKRYVPSVEDTILGIVVDSKPDNFLVDIKGPSLAFLPVLAFEGGTRRNIPK 672
            PNKYWVE+S KRYVP  ED++LGIVVDSK DNFL+DIKGP+LAFLPVLAFEGGTRRNIPK
Sbjct: 60   PNKYWVETSQKRYVPCAEDSVLGIVVDSKSDNFLIDIKGPALAFLPVLAFEGGTRRNIPK 119

Query: 673  FEVGTLLYVRVVKANSGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRMLLSSPTCP 852
            FE GTLLYVRVVKAN GMNPELSCTDASGKAAEFG LKDGYMFE STGLSRMLLSSPTCP
Sbjct: 120  FEAGTLLYVRVVKANPGMNPELSCTDASGKAAEFGALKDGYMFECSTGLSRMLLSSPTCP 179

Query: 853  VLEALGKKLSFEIAVGLNGRVWVNASSPSTVVLVSNAISSSEFLSGVQQRIMVEKLLQRV 1032
            VLEALGKKLSFEIAVGLNGRVWVNA+SPS V++V+NAI +SE LSGVQQ+IM EKLLQ++
Sbjct: 180  VLEALGKKLSFEIAVGLNGRVWVNANSPSIVIIVANAIMNSETLSGVQQKIMAEKLLQKI 239

Query: 1033 E 1035
            +
Sbjct: 240  Q 240


>ref|XP_023923244.1| putative exosome complex component rrp40 [Quercus suber]
 gb|POE97101.1| putative exosome complex component rrp40 [Quercus suber]
          Length = 243

 Score =  389 bits (998), Expect = e-133
 Identities = 192/238 (80%), Positives = 213/238 (89%)
 Frame = +1

Query: 322  DSSNSQPTNLLDKIVVPGDVVLDLSSKRNQTIKLGAGLRQECDTLSAMEAGKLRFLKPNK 501
            D   S PT+ +D+ VVPGDVVLDLS+  NQT+KLG GLRQ+CD +S M+AGKLRF  PNK
Sbjct: 3    DKPTSSPTSFVDQSVVPGDVVLDLSNMTNQTLKLGGGLRQDCDAISVMKAGKLRFSNPNK 62

Query: 502  YWVESSHKRYVPSVEDTILGIVVDSKPDNFLVDIKGPSLAFLPVLAFEGGTRRNIPKFEV 681
            YWVESS KRYVP   D++LGIVVDSK DNFLVDIKGP LAFLPVLAFEGGTRRNIP+FE+
Sbjct: 63   YWVESSQKRYVPHAGDSVLGIVVDSKADNFLVDIKGPGLAFLPVLAFEGGTRRNIPRFEI 122

Query: 682  GTLLYVRVVKANSGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRMLLSSPTCPVLE 861
            GTLLYVRVVKAN GMNPELSCTDASGKAAEFG LKDGYMFE+STGLSRMLLSSPTCPVL+
Sbjct: 123  GTLLYVRVVKANPGMNPELSCTDASGKAAEFGQLKDGYMFESSTGLSRMLLSSPTCPVLD 182

Query: 862  ALGKKLSFEIAVGLNGRVWVNASSPSTVVLVSNAISSSEFLSGVQQRIMVEKLLQRVE 1035
            ALGKKLSFE AVGLNGRVWVNASSPSTV++V+NAI +SE LSGVQQRIMVEKL+Q ++
Sbjct: 183  ALGKKLSFETAVGLNGRVWVNASSPSTVIVVANAIMNSESLSGVQQRIMVEKLIQNLK 240


>ref|XP_006827742.1| putative exosome complex component rrp40 [Amborella trichopoda]
 gb|ERM95158.1| hypothetical protein AMTR_s00009p00262150 [Amborella trichopoda]
          Length = 240

 Score =  388 bits (997), Expect = e-133
 Identities = 187/238 (78%), Positives = 215/238 (90%)
 Frame = +1

Query: 322  DSSNSQPTNLLDKIVVPGDVVLDLSSKRNQTIKLGAGLRQECDTLSAMEAGKLRFLKPNK 501
            D S+S P  L+D  V PGDVVLDL++  NQT+KLG GLRQECD +   +AG+ +F KPNK
Sbjct: 3    DESSSHPNTLVDHWVAPGDVVLDLTNMANQTLKLGGGLRQECDAIIVTKAGRFKFSKPNK 62

Query: 502  YWVESSHKRYVPSVEDTILGIVVDSKPDNFLVDIKGPSLAFLPVLAFEGGTRRNIPKFEV 681
            YWVESS KRYVP VEDT+LGIVVDSK DNFLVDIKGP+L FLPVLAFEGGTRRN+PKFE+
Sbjct: 63   YWVESSQKRYVPCVEDTVLGIVVDSKADNFLVDIKGPTLGFLPVLAFEGGTRRNVPKFEI 122

Query: 682  GTLLYVRVVKANSGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRMLLSSPTCPVLE 861
            GT+LY+RVVKAN+GMNPELSCTDA+GKA+EFGP+KDGYMFE+STGL+R+LLS PTCPVL+
Sbjct: 123  GTVLYLRVVKANTGMNPELSCTDATGKASEFGPIKDGYMFESSTGLARLLLSRPTCPVLD 182

Query: 862  ALGKKLSFEIAVGLNGRVWVNASSPSTVVLVSNAISSSEFLSGVQQRIMVEKLLQRVE 1035
            ALGKKLSFEIAVGLNGRVWVNASSPSTV+LV+NAI S+EFLSG QQRI+VEKLLQRV+
Sbjct: 183  ALGKKLSFEIAVGLNGRVWVNASSPSTVILVANAIMSAEFLSGAQQRILVEKLLQRVQ 240


>ref|XP_011044305.1| PREDICTED: putative exosome complex component rrp40 [Populus
            euphratica]
          Length = 242

 Score =  387 bits (995), Expect = e-133
 Identities = 193/241 (80%), Positives = 215/241 (89%)
 Frame = +1

Query: 313  MEIDSSNSQPTNLLDKIVVPGDVVLDLSSKRNQTIKLGAGLRQECDTLSAMEAGKLRFLK 492
            ME  SS S P   +D +VVPGDVV+DLSS  NQTIKLG GLRQ+CD +S M+AGKLRF K
Sbjct: 1    MESKSSGS-PATFIDNLVVPGDVVVDLSSMTNQTIKLGGGLRQDCDAISVMKAGKLRFSK 59

Query: 493  PNKYWVESSHKRYVPSVEDTILGIVVDSKPDNFLVDIKGPSLAFLPVLAFEGGTRRNIPK 672
            PNKYWVE+S KRYVP  ED+ILGIVVDSK DNFL+D+KGP+LAFLPVLAFEGGTRRNIPK
Sbjct: 60   PNKYWVETSQKRYVPCAEDSILGIVVDSKSDNFLIDMKGPALAFLPVLAFEGGTRRNIPK 119

Query: 673  FEVGTLLYVRVVKANSGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRMLLSSPTCP 852
            FE GTLLYVRVVKAN GM+PELSCTDASGKAAEFG LKDGYMFE STGLSRMLLSSPTCP
Sbjct: 120  FEAGTLLYVRVVKANPGMSPELSCTDASGKAAEFGALKDGYMFECSTGLSRMLLSSPTCP 179

Query: 853  VLEALGKKLSFEIAVGLNGRVWVNASSPSTVVLVSNAISSSEFLSGVQQRIMVEKLLQRV 1032
            VLEALGKKLSFEIAVGLNGRVWVNA+SPS V++V+NAI +SE LSG+QQ+IM EKLLQ++
Sbjct: 180  VLEALGKKLSFEIAVGLNGRVWVNANSPSIVIIVANAIMNSETLSGIQQKIMAEKLLQKI 239

Query: 1033 E 1035
            +
Sbjct: 240  Q 240