BLASTX nr result
ID: Ophiopogon25_contig00016148
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ophiopogon25_contig00016148 (415 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 149,584,005 sequences; 54,822,741,787 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_020256037.1| general negative regulator of transcription ... 59 3e-07 ref|XP_020256036.1| general negative regulator of transcription ... 59 3e-07 >ref|XP_020256037.1| general negative regulator of transcription subunit 3-like isoform X2 [Asparagus officinalis] gb|ONK74294.1| uncharacterized protein A4U43_C03F4770 [Asparagus officinalis] Length = 867 Score = 58.5 bits (140), Expect = 3e-07 Identities = 30/58 (51%), Positives = 40/58 (68%) Frame = -2 Query: 411 PLISTTPNNVDVCHSKGEEXXXXXX*NLSDDLNTKSTINSSHNKVTCDQNLKSPCIHG 238 PLIST+P + D+ HSKG+E NLSD++N +ST NSS NK+ D+N KSP + G Sbjct: 596 PLISTSPKDSDISHSKGDEQQP----NLSDNMNVESTENSSLNKIMSDENSKSPYMIG 649 >ref|XP_020256036.1| general negative regulator of transcription subunit 3-like isoform X1 [Asparagus officinalis] Length = 874 Score = 58.5 bits (140), Expect = 3e-07 Identities = 30/58 (51%), Positives = 40/58 (68%) Frame = -2 Query: 411 PLISTTPNNVDVCHSKGEEXXXXXX*NLSDDLNTKSTINSSHNKVTCDQNLKSPCIHG 238 PLIST+P + D+ HSKG+E NLSD++N +ST NSS NK+ D+N KSP + G Sbjct: 603 PLISTSPKDSDISHSKGDEQQP----NLSDNMNVESTENSSLNKIMSDENSKSPYMIG 656