BLASTX nr result

ID: Ophiopogon25_contig00016148 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00016148
         (415 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020256037.1| general negative regulator of transcription ...    59   3e-07
ref|XP_020256036.1| general negative regulator of transcription ...    59   3e-07

>ref|XP_020256037.1| general negative regulator of transcription subunit 3-like isoform
           X2 [Asparagus officinalis]
 gb|ONK74294.1| uncharacterized protein A4U43_C03F4770 [Asparagus officinalis]
          Length = 867

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 30/58 (51%), Positives = 40/58 (68%)
 Frame = -2

Query: 411 PLISTTPNNVDVCHSKGEEXXXXXX*NLSDDLNTKSTINSSHNKVTCDQNLKSPCIHG 238
           PLIST+P + D+ HSKG+E       NLSD++N +ST NSS NK+  D+N KSP + G
Sbjct: 596 PLISTSPKDSDISHSKGDEQQP----NLSDNMNVESTENSSLNKIMSDENSKSPYMIG 649


>ref|XP_020256036.1| general negative regulator of transcription subunit 3-like isoform
           X1 [Asparagus officinalis]
          Length = 874

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 30/58 (51%), Positives = 40/58 (68%)
 Frame = -2

Query: 411 PLISTTPNNVDVCHSKGEEXXXXXX*NLSDDLNTKSTINSSHNKVTCDQNLKSPCIHG 238
           PLIST+P + D+ HSKG+E       NLSD++N +ST NSS NK+  D+N KSP + G
Sbjct: 603 PLISTSPKDSDISHSKGDEQQP----NLSDNMNVESTENSSLNKIMSDENSKSPYMIG 656


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