BLASTX nr result

ID: Ophiopogon25_contig00016034 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00016034
         (773 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020251742.1| DExH-box ATP-dependent RNA helicase DExH3-li...    65   4e-08
ref|XP_020696726.1| DExH-box ATP-dependent RNA helicase DExH3 [D...    64   6e-08
ref|XP_020570937.1| DExH-box ATP-dependent RNA helicase DExH3 [P...    64   6e-08
ref|XP_010926080.1| PREDICTED: DExH-box ATP-dependent RNA helica...    63   1e-07
ref|XP_008811383.1| PREDICTED: DExH-box ATP-dependent RNA helica...    63   1e-07
gb|PKA49264.1| putative pre-mRNA-splicing factor ATP-dependent R...    63   2e-07
gb|OAY75283.1| ATP-dependent RNA helicase DHX36 [Ananas comosus]       60   1e-06
ref|XP_020088309.1| DExH-box ATP-dependent RNA helicase DExH3-li...    60   1e-06
gb|KHN24317.1| Putative ATP-dependent RNA helicase DHX36 [Glycin...    59   3e-06
ref|XP_009393597.1| PREDICTED: DExH-box ATP-dependent RNA helica...    59   3e-06
ref|XP_016196871.1| DExH-box ATP-dependent RNA helicase DExH3-li...    57   3e-06
ref|XP_015882948.1| PREDICTED: DExH-box ATP-dependent RNA helica...    59   5e-06
dbj|BAS70109.1| Os01g0118100, partial [Oryza sativa Japonica Group]    58   6e-06
dbj|BAD52491.1| putative DEAD/H box polypeptide 36 protein [Oryz...    58   6e-06
ref|XP_015698231.1| PREDICTED: LOW QUALITY PROTEIN: DExH-box ATP...    58   6e-06
ref|XP_022886106.1| DExH-box ATP-dependent RNA helicase DExH3 [O...    58   6e-06
gb|KQK02430.1| hypothetical protein BRADI_2g01360v3 [Brachypodiu...    58   6e-06
ref|XP_004968012.1| DExH-box ATP-dependent RNA helicase DExH3 [S...    58   6e-06
gb|PAN31925.1| hypothetical protein PAHAL_E03838 [Panicum hallii]      58   6e-06
ref|XP_021313012.1| DExH-box ATP-dependent RNA helicase DExH3 [S...    58   6e-06

>ref|XP_020251742.1| DExH-box ATP-dependent RNA helicase DExH3-like [Asparagus
           officinalis]
 gb|ONK81417.1| uncharacterized protein A4U43_C01F28870 [Asparagus officinalis]
          Length = 1188

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 29/30 (96%), Positives = 29/30 (96%)
 Frame = +3

Query: 684 LADSAKSQFSCRDYSDHLALTRAYEGWKDA 773
           LADSAKSQFSCRDYSDHLAL RAYEGWKDA
Sbjct: 827 LADSAKSQFSCRDYSDHLALVRAYEGWKDA 856


>ref|XP_020696726.1| DExH-box ATP-dependent RNA helicase DExH3 [Dendrobium catenatum]
          Length = 1205

 Score = 64.3 bits (155), Expect = 6e-08
 Identities = 29/30 (96%), Positives = 29/30 (96%)
 Frame = +3

Query: 684 LADSAKSQFSCRDYSDHLALTRAYEGWKDA 773
           LADSAKSQFSCRDYSDHLAL RAYEGWKDA
Sbjct: 844 LADSAKSQFSCRDYSDHLALIRAYEGWKDA 873


>ref|XP_020570937.1| DExH-box ATP-dependent RNA helicase DExH3 [Phalaenopsis equestris]
          Length = 1207

 Score = 64.3 bits (155), Expect = 6e-08
 Identities = 29/30 (96%), Positives = 29/30 (96%)
 Frame = +3

Query: 684 LADSAKSQFSCRDYSDHLALTRAYEGWKDA 773
           LADSAKSQFSCRDYSDHLAL RAYEGWKDA
Sbjct: 843 LADSAKSQFSCRDYSDHLALIRAYEGWKDA 872


>ref|XP_010926080.1| PREDICTED: DExH-box ATP-dependent RNA helicase DExH3 [Elaeis
           guineensis]
          Length = 1214

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = +3

Query: 684 LADSAKSQFSCRDYSDHLALTRAYEGWKDA 773
           LA+SAKSQFSCRDYSDHLAL RAYEGWKDA
Sbjct: 855 LAESAKSQFSCRDYSDHLALVRAYEGWKDA 884


>ref|XP_008811383.1| PREDICTED: DExH-box ATP-dependent RNA helicase DExH3 [Phoenix
           dactylifera]
          Length = 1216

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = +3

Query: 684 LADSAKSQFSCRDYSDHLALTRAYEGWKDA 773
           LA+SAKSQFSCRDYSDHLAL RAYEGWKDA
Sbjct: 857 LAESAKSQFSCRDYSDHLALVRAYEGWKDA 886


>gb|PKA49264.1| putative pre-mRNA-splicing factor ATP-dependent RNA helicase
           [Apostasia shenzhenica]
          Length = 1054

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 28/30 (93%), Positives = 28/30 (93%)
 Frame = +3

Query: 684 LADSAKSQFSCRDYSDHLALTRAYEGWKDA 773
           LADSAKSQFSCRDYSDHL L RAYEGWKDA
Sbjct: 693 LADSAKSQFSCRDYSDHLTLIRAYEGWKDA 722


>gb|OAY75283.1| ATP-dependent RNA helicase DHX36 [Ananas comosus]
          Length = 1228

 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = +3

Query: 684 LADSAKSQFSCRDYSDHLALTRAYEGWKDA 773
           LADSAK+QFSCRDYSDHLAL RA++GWKDA
Sbjct: 865 LADSAKAQFSCRDYSDHLALIRAFDGWKDA 894


>ref|XP_020088309.1| DExH-box ATP-dependent RNA helicase DExH3-like [Ananas comosus]
          Length = 1229

 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = +3

Query: 684 LADSAKSQFSCRDYSDHLALTRAYEGWKDA 773
           LADSAK+QFSCRDYSDHLAL RA++GWKDA
Sbjct: 866 LADSAKAQFSCRDYSDHLALIRAFDGWKDA 895


>gb|KHN24317.1| Putative ATP-dependent RNA helicase DHX36 [Glycine soja]
          Length = 412

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 33/99 (33%), Positives = 55/99 (55%)
 Frame = +3

Query: 477 SNVTLPPYQFQRHWNMKVNYLRLCTRMITQILSTFLEFGQSPSSCRINSSLKKFKSNLPK 656
           S   LPP+QF    +  ++   L    + ++    ++F +  ++       K  +S+LP 
Sbjct: 10  SRTLLPPFQFILKLSSILSNNLLPAPHLPRVQDLTMQFPRMITNHIPFIVDKSLQSSLPF 69

Query: 657 IYLKLRMI*LADSAKSQFSCRDYSDHLALTRAYEGWKDA 773
            +    ++ +  +AKS+FS +DYSDH+AL RAYEGWKDA
Sbjct: 70  PFFLFHILVITGTAKSRFSAKDYSDHMALVRAYEGWKDA 108


>ref|XP_009393597.1| PREDICTED: DExH-box ATP-dependent RNA helicase DExH3 [Musa
           acuminata subsp. malaccensis]
          Length = 1215

 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 25/30 (83%), Positives = 29/30 (96%)
 Frame = +3

Query: 684 LADSAKSQFSCRDYSDHLALTRAYEGWKDA 773
           LA+SAKSQFSCRDYSDHLAL RA++GWKD+
Sbjct: 856 LAESAKSQFSCRDYSDHLALVRAFDGWKDS 885


>ref|XP_016196871.1| DExH-box ATP-dependent RNA helicase DExH3-like [Arachis ipaensis]
          Length = 189

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +3

Query: 684 LADSAKSQFSCRDYSDHLALTRAYEGWKDA 773
           LA+SAK+QFS RDYSDHLAL RAYEGWK+A
Sbjct: 36  LAESAKAQFSARDYSDHLALVRAYEGWKEA 65


>ref|XP_015882948.1| PREDICTED: DExH-box ATP-dependent RNA helicase DExH3 [Ziziphus
           jujuba]
          Length = 1226

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = +3

Query: 684 LADSAKSQFSCRDYSDHLALTRAYEGWKDA 773
           LA+SAK+QFS RDYSDHLAL RAYEGWKDA
Sbjct: 853 LAESAKAQFSARDYSDHLALVRAYEGWKDA 882


>dbj|BAS70109.1| Os01g0118100, partial [Oryza sativa Japonica Group]
          Length = 818

 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +3

Query: 684 LADSAKSQFSCRDYSDHLALTRAYEGWKDA 773
           LA+SAK QFSCRDYSDHLAL RAYEGW++A
Sbjct: 448 LAESAKLQFSCRDYSDHLALVRAYEGWREA 477


>dbj|BAD52491.1| putative DEAD/H box polypeptide 36 protein [Oryza sativa Japonica
           Group]
          Length = 1063

 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +3

Query: 684 LADSAKSQFSCRDYSDHLALTRAYEGWKDA 773
           LA+SAK QFSCRDYSDHLAL RAYEGW++A
Sbjct: 693 LAESAKLQFSCRDYSDHLALVRAYEGWREA 722


>ref|XP_015698231.1| PREDICTED: LOW QUALITY PROTEIN: DExH-box ATP-dependent RNA helicase
           DExH3-like [Oryza brachyantha]
          Length = 1097

 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +3

Query: 684 LADSAKSQFSCRDYSDHLALTRAYEGWKDA 773
           LA+SAK QFSCRDYSDHLAL RAYEGW++A
Sbjct: 718 LAESAKLQFSCRDYSDHLALVRAYEGWREA 747


>ref|XP_022886106.1| DExH-box ATP-dependent RNA helicase DExH3 [Olea europaea var.
           sylvestris]
          Length = 1187

 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = +3

Query: 684 LADSAKSQFSCRDYSDHLALTRAYEGWKDA 773
           LADSAK+QFS RD+SDHLAL RAYEGWKDA
Sbjct: 824 LADSAKAQFSARDFSDHLALLRAYEGWKDA 853


>gb|KQK02430.1| hypothetical protein BRADI_2g01360v3 [Brachypodium distachyon]
          Length = 1216

 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +3

Query: 684 LADSAKSQFSCRDYSDHLALTRAYEGWKDA 773
           LA+SAK QFSCRDYSDHLAL RAYEGW++A
Sbjct: 875 LAESAKLQFSCRDYSDHLALVRAYEGWREA 904


>ref|XP_004968012.1| DExH-box ATP-dependent RNA helicase DExH3 [Setaria italica]
          Length = 1240

 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +3

Query: 684 LADSAKSQFSCRDYSDHLALTRAYEGWKDA 773
           LA+SAK QFSCRDYSDHLAL RAYEGW++A
Sbjct: 868 LAESAKLQFSCRDYSDHLALVRAYEGWREA 897


>gb|PAN31925.1| hypothetical protein PAHAL_E03838 [Panicum hallii]
          Length = 1241

 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +3

Query: 684 LADSAKSQFSCRDYSDHLALTRAYEGWKDA 773
           LA+SAK QFSCRDYSDHLAL RAYEGW++A
Sbjct: 868 LAESAKLQFSCRDYSDHLALVRAYEGWREA 897


>ref|XP_021313012.1| DExH-box ATP-dependent RNA helicase DExH3 [Sorghum bicolor]
 gb|KXG32067.1| hypothetical protein SORBI_3003G095900 [Sorghum bicolor]
          Length = 1241

 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +3

Query: 684 LADSAKSQFSCRDYSDHLALTRAYEGWKDA 773
           LA+SAK QFSCRDYSDHLAL RAYEGW++A
Sbjct: 868 LAESAKLQFSCRDYSDHLALVRAYEGWREA 897


Top