BLASTX nr result
ID: Ophiopogon25_contig00016028
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00016028
(1061 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo... 282 3e-83
gb|KYP53356.1| Retrovirus-related Pol polyprotein from transposo... 255 2e-77
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar... 264 8e-76
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar... 264 9e-76
gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposo... 261 8e-75
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo... 255 2e-73
gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medic... 247 7e-73
gb|ONK76589.1| uncharacterized protein A4U43_C03F29880 [Asparagu... 237 1e-72
gb|ONK68535.1| uncharacterized protein A4U43_C05F12950 [Asparagu... 232 6e-71
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc... 245 6e-70
gb|ASR75372.1| retrotransposon protein [Oryza nivara] 246 1e-69
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 246 3e-69
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa] 245 4e-69
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 244 5e-69
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 244 8e-69
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 244 8e-69
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 244 8e-69
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote... 243 1e-68
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 243 1e-68
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 241 5e-68
>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1032
Score = 282 bits (721), Expect = 3e-83
Identities = 143/217 (65%), Positives = 170/217 (78%), Gaps = 2/217 (0%)
Frame = -2
Query: 646 GGDFNEVFSPVVKYSSIRILLVLVAQYDFDLVQLVVMTVFLHGVLE--IYMTQPMGFKAA 473
G D+NEVFSPVVK+SSIR+LL LVAQ D +LVQ+ V T FLHG LE IYMTQP GFK A
Sbjct: 657 GIDYNEVFSPVVKHSSIRVLLALVAQLDMELVQMDVKTAFLHGDLEEEIYMTQPEGFKVA 716
Query: 472 GKEELVCKLKKSLYGLKQSPRQWYKRFDSFMTGKGYTRSPYDPCVYLQKQPNGEYIYLLL 293
GKE + CKL+KSLYGLKQSPRQWYKRFD FM + YTRS YD CVYL+K +G +IYLLL
Sbjct: 717 GKENMFCKLEKSLYGLKQSPRQWYKRFDKFMLRQKYTRSKYDHCVYLRKLHDGSFIYLLL 776
Query: 292 YVDDMLIASKDSVAIAKLKSQLSSEFEMKDFWEAKKI*GMKIERDRKKGRLCLTQKGYLR 113
YVDDMLIASK+ I KLK+QL+ EFEMKD EAKKI GM+I RDRK GRLCLTQK YL+
Sbjct: 777 YVDDMLIASKNKEEIEKLKTQLNGEFEMKDLGEAKKILGMEISRDRKLGRLCLTQKEYLK 836
Query: 112 KMFQKFDFDSETKAVNTPLAPYFKFSAKMSSKTVEDR 2
++ ++F E+K V+TPLA +FK SA +S + ++
Sbjct: 837 RVLKRFGISDESKPVSTPLASHFKLSANLSPRDAAEK 873
Score = 75.5 bits (184), Expect(2) = 3e-18
Identities = 36/52 (69%), Positives = 44/52 (84%), Gaps = 1/52 (1%)
Frame = -1
Query: 932 GVDFNEVFSPVVKRHSVRILLALMAQYDFDLIQLDVKIVFLHDDL-EEIYMT 780
G+D+NEVFSPVVK S+R+LLAL+AQ D +L+Q+DVK FLH DL EEIYMT
Sbjct: 657 GIDYNEVFSPVVKHSSIRVLLALVAQLDMELVQMDVKTAFLHGDLEEEIYMT 708
Score = 46.2 bits (108), Expect(2) = 3e-18
Identities = 24/42 (57%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Frame = -2
Query: 1060 ELSKLPVGKKVIGCKCVYA-KEGFPSEG-IRFKTRLVVKSYA 941
+L+ LP GKK IGCK VYA K+GF + +R+K RLV K YA
Sbjct: 612 KLANLPKGKKAIGCKWVYAKKDGFSDKSEVRYKARLVAKGYA 653
>gb|KYP53356.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 503
Score = 255 bits (652), Expect = 2e-77
Identities = 128/216 (59%), Positives = 167/216 (77%), Gaps = 2/216 (0%)
Frame = -2
Query: 646 GGDFNEVFSPVVKYSSIRILLVLVAQYDFDLVQLVVMTVFLHGVLE--IYMTQPMGFKAA 473
G DFNE+FSPVV+++SIRILL VA +D +L QL V T FLHG LE IYM QP GF
Sbjct: 60 GIDFNEIFSPVVRHTSIRILLAFVALFDLELEQLDVKTAFLHGELEEEIYMDQPEGFVVP 119
Query: 472 GKEELVCKLKKSLYGLKQSPRQWYKRFDSFMTGKGYTRSPYDPCVYLQKQPNGEYIYLLL 293
KE LVC+LKKSLYGLKQ+PRQWYK+FDSFM G+GY+RS YD C+Y Q+ P+G +IYLLL
Sbjct: 120 SKEHLVCQLKKSLYGLKQAPRQWYKKFDSFMIGQGYSRSKYDDCIYFQQFPDGTFIYLLL 179
Query: 292 YVDDMLIASKDSVAIAKLKSQLSSEFEMKDFWEAKKI*GMKIERDRKKGRLCLTQKGYLR 113
YVDDMLIAS+D I+KLK+QL++EFEMK+ AKKI GM+I RDR+ G+L L+Q+ Y+
Sbjct: 180 YVDDMLIASRDKSLISKLKAQLNNEFEMKELGAAKKILGMEIHRDRQVGKLFLSQQKYIE 239
Query: 112 KMFQKFDFDSETKAVNTPLAPYFKFSAKMSSKTVED 5
++ +F+ ++ K V+TPLA +FK S+ + +T E+
Sbjct: 240 RLLDRFNMNN-CKPVSTPLAAHFKLSSDLCPQTKEE 274
Score = 67.4 bits (163), Expect(2) = 8e-13
Identities = 33/51 (64%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Frame = -1
Query: 932 GVDFNEVFSPVVKRHSVRILLALMAQYDFDLIQLDVKIVFLHDDL-EEIYM 783
G+DFNE+FSPVV+ S+RILLA +A +D +L QLDVK FLH +L EEIYM
Sbjct: 60 GIDFNEIFSPVVRHTSIRILLAFVALFDLELEQLDVKTAFLHGELEEEIYM 110
Score = 35.8 bits (81), Expect(2) = 8e-13
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = -2
Query: 1057 LSKLPVGKKVIGCKCVY-AKEGFPS-EGIRFKTRLVVKSY 944
L+KLP GK+ + CK +Y K+G P E R K RLVVK +
Sbjct: 16 LTKLPKGKRPLRCKWIYKKKDGIPGVEDPRCKARLVVKGF 55
>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
Length = 2351
Score = 264 bits (675), Expect = 8e-76
Identities = 139/217 (64%), Positives = 165/217 (76%), Gaps = 2/217 (0%)
Frame = -2
Query: 646 GGDFNEVFSPVVKYSSIRILLVLVAQYDFDLVQLVVMTVFLHGVLE--IYMTQPMGFKAA 473
G D+NEVFSPVVK+SSIR+LL +VA+ D +L QL V T FLHG LE IYM QP GF
Sbjct: 1379 GIDYNEVFSPVVKHSSIRVLLAMVAKSDLELEQLDVKTAFLHGELEETIYMRQPEGFTVP 1438
Query: 472 GKEELVCKLKKSLYGLKQSPRQWYKRFDSFMTGKGYTRSPYDPCVYLQKQPNGEYIYLLL 293
GKE+ VC LKKSLYGLKQSPRQWYKRFDSFM GYTR YD CVY +K +G +IYLLL
Sbjct: 1439 GKEDHVCLLKKSLYGLKQSPRQWYKRFDSFMIQHGYTRCDYDACVYHRKLSDGSHIYLLL 1498
Query: 292 YVDDMLIASKDSVAIAKLKSQLSSEFEMKDFWEAKKI*GMKIERDRKKGRLCLTQKGYLR 113
YVDDMLIASK+ I KLKSQLS EFEMKD AKKI GM I RDRK G+L ++QK Y+
Sbjct: 1499 YVDDMLIASKNMSEINKLKSQLSGEFEMKDLGAAKKILGMDIHRDRKAGKLRVSQKNYIE 1558
Query: 112 KMFQKFDFDSETKAVNTPLAPYFKFSAKMSSKTVEDR 2
K+ Q+F D + K V+TPLAP+FK SA++S ++ E++
Sbjct: 1559 KVLQRFGMD-KAKTVSTPLAPHFKLSAELSPQSDEEK 1594
Score = 67.8 bits (164), Expect(2) = 7e-13
Identities = 33/51 (64%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
Frame = -1
Query: 932 GVDFNEVFSPVVKRHSVRILLALMAQYDFDLIQLDVKIVFLHDDLEE-IYM 783
G+D+NEVFSPVVK S+R+LLA++A+ D +L QLDVK FLH +LEE IYM
Sbjct: 1379 GIDYNEVFSPVVKHSSIRVLLAMVAKSDLELEQLDVKTAFLHGELEETIYM 1429
Score = 35.4 bits (80), Expect(2) = 7e-13
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -2
Query: 1060 ELSKLPVGKKVIGCKCVY-AKEGFPS-EGIRFKTRLVVKSY 944
EL K P +K++GCK V+ KEG E RFK RLV K +
Sbjct: 1334 ELVKPPSNQKIVGCKWVFKKKEGILGVEATRFKARLVAKGF 1374
>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
Length = 1841
Score = 264 bits (675), Expect = 9e-76
Identities = 139/217 (64%), Positives = 165/217 (76%), Gaps = 2/217 (0%)
Frame = -2
Query: 646 GGDFNEVFSPVVKYSSIRILLVLVAQYDFDLVQLVVMTVFLHGVLE--IYMTQPMGFKAA 473
G D+NEVFSPVVK+SSIR+LL +VA+ D +L QL V T FLHG LE IYM QP GF
Sbjct: 1400 GIDYNEVFSPVVKHSSIRVLLAMVAKSDLELEQLDVKTAFLHGELEETIYMRQPEGFTVP 1459
Query: 472 GKEELVCKLKKSLYGLKQSPRQWYKRFDSFMTGKGYTRSPYDPCVYLQKQPNGEYIYLLL 293
GKE+ VC LKKSLYGLKQSPRQWYKRFDSFM GYTR YD CVY +K +G +IYLLL
Sbjct: 1460 GKEDHVCLLKKSLYGLKQSPRQWYKRFDSFMIQHGYTRCDYDACVYHRKLSDGSHIYLLL 1519
Query: 292 YVDDMLIASKDSVAIAKLKSQLSSEFEMKDFWEAKKI*GMKIERDRKKGRLCLTQKGYLR 113
YVDDMLIASK+ I KLKSQLS EFEMKD AKKI GM I RDRK G+L ++QK Y+
Sbjct: 1520 YVDDMLIASKNMSEINKLKSQLSGEFEMKDLGAAKKILGMDIHRDRKAGKLRVSQKNYIE 1579
Query: 112 KMFQKFDFDSETKAVNTPLAPYFKFSAKMSSKTVEDR 2
K+ Q+F D + K V+TPLAP+FK SA++S ++ E++
Sbjct: 1580 KVLQRFGMD-KAKTVSTPLAPHFKLSAELSPQSDEEK 1615
Score = 67.8 bits (164), Expect(2) = 7e-13
Identities = 33/51 (64%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
Frame = -1
Query: 932 GVDFNEVFSPVVKRHSVRILLALMAQYDFDLIQLDVKIVFLHDDLEE-IYM 783
G+D+NEVFSPVVK S+R+LLA++A+ D +L QLDVK FLH +LEE IYM
Sbjct: 1400 GIDYNEVFSPVVKHSSIRVLLAMVAKSDLELEQLDVKTAFLHGELEETIYM 1450
Score = 35.4 bits (80), Expect(2) = 7e-13
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -2
Query: 1060 ELSKLPVGKKVIGCKCVY-AKEGFPS-EGIRFKTRLVVKSY 944
EL K P +K++GCK V+ KEG E RFK RLV K +
Sbjct: 1355 ELVKPPSNQKIVGCKWVFKKKEGILGVEATRFKARLVAKGF 1395
>gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Capsicum
baccatum]
Length = 1526
Score = 261 bits (668), Expect = 8e-75
Identities = 136/217 (62%), Positives = 163/217 (75%), Gaps = 2/217 (0%)
Frame = -2
Query: 646 GGDFNEVFSPVVKYSSIRILLVLVAQYDFDLVQLVVMTVFLHGVLE--IYMTQPMGFKAA 473
G DFNEVFSPVV++SSIR+LL LVA YD +L QL V T FLHG LE IY+ QP GF
Sbjct: 549 GIDFNEVFSPVVRHSSIRVLLALVALYDLELEQLDVKTAFLHGNLEEEIYIQQPEGFVVP 608
Query: 472 GKEELVCKLKKSLYGLKQSPRQWYKRFDSFMTGKGYTRSPYDPCVYLQKQPNGEYIYLLL 293
GKE VC+LKKSLYGLKQSPRQWYKRFDSFMTG GY+RS YD CVY QK +G +YLLL
Sbjct: 609 GKENHVCRLKKSLYGLKQSPRQWYKRFDSFMTGHGYSRSSYDNCVYFQKLSDGSLVYLLL 668
Query: 292 YVDDMLIASKDSVAIAKLKSQLSSEFEMKDFWEAKKI*GMKIERDRKKGRLCLTQKGYLR 113
YVDDMLIA++D + KLK QL+SEF+MKD AKKI GM+I RDR+ G+L L+QK Y+
Sbjct: 669 YVDDMLIAARDKTLVDKLKVQLNSEFDMKDLGPAKKILGMEINRDRQAGKLFLSQKKYVM 728
Query: 112 KMFQKFDFDSETKAVNTPLAPYFKFSAKMSSKTVEDR 2
KM +F + KAVNTPLA +FK S+ ++ E++
Sbjct: 729 KMLDRFGM-RDCKAVNTPLAAHFKLSSDQCPQSEEEQ 764
Score = 68.9 bits (167), Expect(2) = 1e-13
Identities = 32/47 (68%), Positives = 39/47 (82%)
Frame = -1
Query: 932 GVDFNEVFSPVVKRHSVRILLALMAQYDFDLIQLDVKIVFLHDDLEE 792
G+DFNEVFSPVV+ S+R+LLAL+A YD +L QLDVK FLH +LEE
Sbjct: 549 GIDFNEVFSPVVRHSSIRVLLALVALYDLELEQLDVKTAFLHGNLEE 595
Score = 37.0 bits (84), Expect(2) = 1e-13
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = -2
Query: 1060 ELSKLPVGKKVIGCKCVY-AKEGFPS-EGIRFKTRLVVKSY 944
+L LP GK+VI CK ++ KEG P E R+K R VV+ +
Sbjct: 504 DLVMLPEGKRVISCKWIFKRKEGIPGVENARYKARFVVRGF 544
>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1032
Score = 255 bits (652), Expect = 2e-73
Identities = 128/216 (59%), Positives = 167/216 (77%), Gaps = 2/216 (0%)
Frame = -2
Query: 646 GGDFNEVFSPVVKYSSIRILLVLVAQYDFDLVQLVVMTVFLHGVLE--IYMTQPMGFKAA 473
G DFNE+FSPVV+++SIRILL VA +D +L QL V T FLHG LE IYM QP GF
Sbjct: 589 GIDFNEIFSPVVRHTSIRILLAFVALFDLELEQLDVKTAFLHGELEEEIYMDQPEGFVVP 648
Query: 472 GKEELVCKLKKSLYGLKQSPRQWYKRFDSFMTGKGYTRSPYDPCVYLQKQPNGEYIYLLL 293
KE LVC+LKKSLYGLKQ+PRQWYK+FDSFM G+GY+RS YD C+Y Q+ P+G +IYLLL
Sbjct: 649 SKEHLVCQLKKSLYGLKQAPRQWYKKFDSFMIGQGYSRSKYDDCIYFQQFPDGTFIYLLL 708
Query: 292 YVDDMLIASKDSVAIAKLKSQLSSEFEMKDFWEAKKI*GMKIERDRKKGRLCLTQKGYLR 113
YVDDMLIAS+D I+KLK+QL++EFEMK+ AKKI GM+I RDR+ G+L L+Q+ Y+
Sbjct: 709 YVDDMLIASRDKSLISKLKAQLNNEFEMKELGAAKKILGMEIHRDRQVGKLFLSQQKYIE 768
Query: 112 KMFQKFDFDSETKAVNTPLAPYFKFSAKMSSKTVED 5
++ +F+ ++ K V+TPLA +FK S+ + +T E+
Sbjct: 769 RLLDRFNMNN-CKPVSTPLAAHFKLSSDLCPQTKEE 803
Score = 67.4 bits (163), Expect(2) = 8e-13
Identities = 33/51 (64%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Frame = -1
Query: 932 GVDFNEVFSPVVKRHSVRILLALMAQYDFDLIQLDVKIVFLHDDL-EEIYM 783
G+DFNE+FSPVV+ S+RILLA +A +D +L QLDVK FLH +L EEIYM
Sbjct: 589 GIDFNEIFSPVVRHTSIRILLAFVALFDLELEQLDVKTAFLHGELEEEIYM 639
Score = 35.8 bits (81), Expect(2) = 8e-13
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = -2
Query: 1057 LSKLPVGKKVIGCKCVY-AKEGFPS-EGIRFKTRLVVKSY 944
L+KLP GK+ + CK +Y K+G P E R K RLVVK +
Sbjct: 545 LTKLPKGKRPLRCKWIYKKKDGIPGVEDPRCKARLVVKGF 584
>gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medicago truncatula]
Length = 624
Score = 247 bits (630), Expect = 7e-73
Identities = 125/216 (57%), Positives = 162/216 (75%), Gaps = 2/216 (0%)
Frame = -2
Query: 646 GGDFNEVFSPVVKYSSIRILLVLVAQYDFDLVQLVVMTVFLHGVLE--IYMTQPMGFKAA 473
G DFNE+FSPVV+++SIR+LL VA +D +L QL V T FLHG LE IYM Q GF A
Sbjct: 243 GIDFNEIFSPVVRHTSIRVLLAFVALFDLELEQLDVKTAFLHGELEEEIYMEQSDGFIAP 302
Query: 472 GKEELVCKLKKSLYGLKQSPRQWYKRFDSFMTGKGYTRSPYDPCVYLQKQPNGEYIYLLL 293
GKE LVC+LKKSLYGLKQ+PRQWYKRF SFM G+ Y +S YD C+Y Q NG +IYLLL
Sbjct: 303 GKEHLVCRLKKSLYGLKQAPRQWYKRFHSFMIGQNYCKSQYDDCIYFQNFQNGSFIYLLL 362
Query: 292 YVDDMLIASKDSVAIAKLKSQLSSEFEMKDFWEAKKI*GMKIERDRKKGRLCLTQKGYLR 113
YVDDMLIAS+D I KLK++LS+EF+MK+ AKKI GM+I RDR+ G+L L+Q+ Y++
Sbjct: 363 YVDDMLIASRDKSLIKKLKTELSNEFDMKELGAAKKILGMEIRRDRQAGKLFLSQQKYIK 422
Query: 112 KMFQKFDFDSETKAVNTPLAPYFKFSAKMSSKTVED 5
++ +F+ ++ K V+TPLA +FK S++ T E+
Sbjct: 423 RVLDRFNMNN-CKPVSTPLAAHFKLSSEFCPNTKEE 457
Score = 67.0 bits (162), Expect(2) = 1e-12
Identities = 32/51 (62%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Frame = -1
Query: 932 GVDFNEVFSPVVKRHSVRILLALMAQYDFDLIQLDVKIVFLHDDL-EEIYM 783
G+DFNE+FSPVV+ S+R+LLA +A +D +L QLDVK FLH +L EEIYM
Sbjct: 243 GIDFNEIFSPVVRHTSIRVLLAFVALFDLELEQLDVKTAFLHGELEEEIYM 293
Score = 35.8 bits (81), Expect(2) = 1e-12
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = -2
Query: 1057 LSKLPVGKKVIGCKCVY-AKEGFPS-EGIRFKTRLVVKSY 944
L++LP GK+ + CK +Y KEG P E R K RLVVK +
Sbjct: 199 LTELPKGKRPLRCKWIYKKKEGIPGVENPRCKARLVVKGF 238
>gb|ONK76589.1| uncharacterized protein A4U43_C03F29880 [Asparagus officinalis]
Length = 305
Score = 237 bits (604), Expect = 1e-72
Identities = 119/170 (70%), Positives = 135/170 (79%)
Frame = -2
Query: 511 EIYMTQPMGFKAAGKEELVCKLKKSLYGLKQSPRQWYKRFDSFMTGKGYTRSPYDPCVYL 332
EIYM QP+GFKAAGKE+LVCKLKKSLYGLKQSPRQWYKRFD FM G GYTRSPYD CVY+
Sbjct: 58 EIYMIQPLGFKAAGKEDLVCKLKKSLYGLKQSPRQWYKRFDGFMIGYGYTRSPYDQCVYM 117
Query: 331 QKQPNGEYIYLLLYVDDMLIASKDSVAIAKLKSQLSSEFEMKDFWEAKKI*GMKIERDRK 152
K + EY+YLLLYVDDMLIA ++ +AI KLK LSSEF++ D AKKI GM+IERD
Sbjct: 118 HKLHDSEYVYLLLYVDDMLIAFRNYLAIRKLKEGLSSEFKINDLRGAKKILGMEIERDMV 177
Query: 151 KGRLCLTQKGYLRKMFQKFDFDSETKAVNTPLAPYFKFSAKMSSKTVEDR 2
KG L LTQK YL+KM +KF FD KAV+T LAP+FKF A MS VED+
Sbjct: 178 KGSLELTQKSYLQKMLKKFSFDGNAKAVSTQLAPHFKFLALMSHVLVEDK 227
>gb|ONK68535.1| uncharacterized protein A4U43_C05F12950 [Asparagus officinalis]
Length = 299
Score = 232 bits (592), Expect = 6e-71
Identities = 120/216 (55%), Positives = 159/216 (73%), Gaps = 2/216 (0%)
Frame = -2
Query: 646 GGDFNEVFSPVVKYSSIRILLVLVAQYDFDLVQLVVMTVFLHGVLE--IYMTQPMGFKAA 473
G DFNEVFSPV+K++SIR+L +VA ++ +L QL V T FLHG L+ I+M QP GF
Sbjct: 40 GVDFNEVFSPVIKHTSIRVLFAMVAHFNLELEQLDVKTAFLHGELDEQIFMHQPEGFIVE 99
Query: 472 GKEELVCKLKKSLYGLKQSPRQWYKRFDSFMTGKGYTRSPYDPCVYLQKQPNGEYIYLLL 293
GKE+ VC+LKKSLYGLKQSPRQWY RFD+FM GY+R+ YD CVY +K +G ++YLLL
Sbjct: 100 GKEDHVCRLKKSLYGLKQSPRQWYLRFDTFMFEHGYSRNKYDSCVYHKKLNDGFFVYLLL 159
Query: 292 YVDDMLIASKDSVAIAKLKSQLSSEFEMKDFWEAKKI*GMKIERDRKKGRLCLTQKGYLR 113
YVDDMLIA+KD I +LKSQL EFEMK+ KKI GM+I R+R++G L L+Q+ Y++
Sbjct: 160 YVDDMLIAAKDMSEINELKSQLKHEFEMKNLGATKKILGMEIHRNRREGSLFLSQEKYIK 219
Query: 112 KMFQKFDFDSETKAVNTPLAPYFKFSAKMSSKTVED 5
K+ ++F + K V T LA +F+ SA +S +T E+
Sbjct: 220 KVLERFGM-LDAKPVKTLLAAHFRLSADLSPQTEEE 254
Score = 65.1 bits (157), Expect(2) = 1e-12
Identities = 29/52 (55%), Positives = 39/52 (75%)
Frame = -1
Query: 932 GVDFNEVFSPVVKRHSVRILLALMAQYDFDLIQLDVKIVFLHDDLEEIYMTH 777
GVDFNEVFSPV+K S+R+L A++A ++ +L QLDVK FLH +L+E H
Sbjct: 40 GVDFNEVFSPVIKHTSIRVLFAMVAHFNLELEQLDVKTAFLHGELDEQIFMH 91
Score = 37.4 bits (85), Expect(2) = 1e-12
Identities = 17/36 (47%), Positives = 27/36 (75%), Gaps = 2/36 (5%)
Frame = -2
Query: 1042 VGKKVIGCKCVY-AKEGFP-SEGIRFKTRLVVKSYA 941
+G+K++GCK V+ KEG P ++ +R+K RLV K Y+
Sbjct: 1 MGQKIVGCKWVFKKKEGAPDTDSVRYKARLVAKDYS 36
>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 983
Score = 245 bits (626), Expect = 6e-70
Identities = 130/214 (60%), Positives = 161/214 (75%), Gaps = 2/214 (0%)
Frame = -2
Query: 640 DFNEVFSPVVKYSSIRILLVLVAQYDFDLVQLVVMTVFLHGVLE--IYMTQPMGFKAAGK 467
DFN+VFSP+VK+SSIR LL +VA +D++L Q+ V T FLHG LE IYM QP GF GK
Sbjct: 638 DFNDVFSPIVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGK 697
Query: 466 EELVCKLKKSLYGLKQSPRQWYKRFDSFMTGKGYTRSPYDPCVYLQKQPNGEYIYLLLYV 287
E LVC+LKKSLYGLKQSPRQWYKRFDSFM + + RS YD CVYL K +G IYLLLYV
Sbjct: 698 ENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDNCVYL-KVVDGSAIYLLLYV 756
Query: 286 DDMLIASKDSVAIAKLKSQLSSEFEMKDFWEAKKI*GMKIERDRKKGRLCLTQKGYLRKM 107
DDMLIA+KD I KLK+QLSSEFEMKD AKKI GM+I R+R G+L L+QKGY+ K+
Sbjct: 757 DDMLIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEKV 816
Query: 106 FQKFDFDSETKAVNTPLAPYFKFSAKMSSKTVED 5
++F+ + K V+TPLA +F+ S+ + ++ D
Sbjct: 817 LRRFNM-HDAKPVSTPLAAHFRSSSDLCPQSDYD 849
Score = 64.3 bits (155), Expect(2) = 1e-12
Identities = 29/53 (54%), Positives = 42/53 (79%), Gaps = 1/53 (1%)
Frame = -1
Query: 938 VGGVDFNEVFSPVVKRHSVRILLALMAQYDFDLIQLDVKIVFLHDDLEE-IYM 783
+ +DFN+VFSP+VK S+R LL+++A +D++L Q+DVK FLH +LEE IYM
Sbjct: 634 IPSIDFNDVFSPIVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYM 686
Score = 38.1 bits (87), Expect(2) = 1e-12
Identities = 22/42 (52%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Frame = -2
Query: 1060 ELSKLPVGKKVIGCKCVY-AKEGF-PSEGIRFKTRLVVKSYA 941
EL KLP KK I CK ++ KEG PS+ R+K RLV K Y+
Sbjct: 591 ELVKLPKEKKSIRCKWIFKRKEGMSPSDEARYKARLVAKGYS 632
>gb|ASR75372.1| retrotransposon protein [Oryza nivara]
Length = 1170
Score = 246 bits (627), Expect = 1e-69
Identities = 130/218 (59%), Positives = 157/218 (72%), Gaps = 2/218 (0%)
Frame = -2
Query: 652 VGGGDFNEVFSPVVKYSSIRILLVLVAQYDFDLVQLVVMTVFLHGVLE--IYMTQPMGFK 479
+ G D+N+VFSPVVK+SSIR +VA +D +L QL V T FLHG LE IYM QP GF
Sbjct: 802 IAGVDYNDVFSPVVKHSSIRTFFSIVAMHDLELEQLDVKTAFLHGELEEEIYMDQPEGFI 861
Query: 478 AAGKEELVCKLKKSLYGLKQSPRQWYKRFDSFMTGKGYTRSPYDPCVYLQKQPNGEYIYL 299
GKE+ VCKLK+SLYGLKQSPRQWYKRFDSFM G+ RS +D CVY+ K NG IYL
Sbjct: 862 VPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYI-KFVNGSPIYL 920
Query: 298 LLYVDDMLIASKDSVAIAKLKSQLSSEFEMKDFWEAKKI*GMKIERDRKKGRLCLTQKGY 119
LLYVDDMLIA+K I LK QLSSEF+MKD AKKI GM+I RDR G L L+Q+ Y
Sbjct: 921 LLYVDDMLIAAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEITRDRNSGLLFLSQQSY 980
Query: 118 LRKMFQKFDFDSETKAVNTPLAPYFKFSAKMSSKTVED 5
++K+ Q+F+ + K V+TP+AP+FK SA + T ED
Sbjct: 981 IKKVLQRFNM-HDAKPVSTPIAPHFKLSALQCASTDED 1017
Score = 63.9 bits (154), Expect(2) = 1e-11
Identities = 31/59 (52%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = -1
Query: 956 SKKLCVVGGVDFNEVFSPVVKRHSVRILLALMAQYDFDLIQLDVKIVFLHDDL-EEIYM 783
+K + GVD+N+VFSPVVK S+R +++A +D +L QLDVK FLH +L EEIYM
Sbjct: 796 AKGFSQIAGVDYNDVFSPVVKHSSIRTFFSIVAMHDLELEQLDVKTAFLHGELEEEIYM 854
Score = 35.4 bits (80), Expect(2) = 1e-11
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = -2
Query: 1060 ELSKLPVGKKVIGCKCVYAKEG---FPSEGIRFKTRLVVKSYA 941
EL LP KK + CK ++ ++G PSE RFK RLV K ++
Sbjct: 758 ELVHLPKQKKPVRCKWIFKEKGGFISPSEPPRFKARLVAKGFS 800
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2340
Score = 246 bits (627), Expect = 3e-69
Identities = 132/218 (60%), Positives = 162/218 (74%), Gaps = 2/218 (0%)
Frame = -2
Query: 652 VGGGDFNEVFSPVVKYSSIRILLVLVAQYDFDLVQLVVMTVFLHGVLE--IYMTQPMGFK 479
+ G DFN+VFSPVVK+SSIR LL +VA +D++L Q+ V T FLHG LE IYM QP GF
Sbjct: 1099 IPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPKGFV 1158
Query: 478 AAGKEELVCKLKKSLYGLKQSPRQWYKRFDSFMTGKGYTRSPYDPCVYLQKQPNGEYIYL 299
GKE LVC+LKKSLYGLKQSPRQWYKRFDSFM + + RS YD CVYL K +G IYL
Sbjct: 1159 VPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYL-KVVDGSAIYL 1217
Query: 298 LLYVDDMLIASKDSVAIAKLKSQLSSEFEMKDFWEAKKI*GMKIERDRKKGRLCLTQKGY 119
LLYVDDMLIA+KD IAKLK+QLSSEFEMKD AKKI GM+I R R +L L+QKGY
Sbjct: 1218 LLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRKRHSFKLYLSQKGY 1277
Query: 118 LRKMFQKFDFDSETKAVNTPLAPYFKFSAKMSSKTVED 5
+ K+ ++F+ + K V+TPLA +F+ S+ + ++ D
Sbjct: 1278 IEKVLRRFNM-HDAKPVSTPLAAHFRLSSDLCPQSDYD 1314
Score = 67.0 bits (162), Expect(2) = 2e-12
Identities = 31/53 (58%), Positives = 43/53 (81%), Gaps = 1/53 (1%)
Frame = -1
Query: 938 VGGVDFNEVFSPVVKRHSVRILLALMAQYDFDLIQLDVKIVFLHDDLEE-IYM 783
+ G+DFN+VFSPVVK S+R LL+++A +D++L Q+DVK FLH +LEE IYM
Sbjct: 1099 IPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYM 1151
Score = 34.7 bits (78), Expect(2) = 2e-12
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = -2
Query: 1060 ELSKLPVGKKVIGCKCVY-AKEGF-PSEGIRFKTRLVVKSYA 941
EL KLP KK I CK ++ KEG S+ R+K RL+ K Y+
Sbjct: 1056 ELVKLPKEKKPIRCKWIFKRKEGISSSDEARYKARLIAKGYS 1097
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa]
Length = 1335
Score = 245 bits (625), Expect = 4e-69
Identities = 130/215 (60%), Positives = 155/215 (72%), Gaps = 2/215 (0%)
Frame = -2
Query: 652 VGGGDFNEVFSPVVKYSSIRILLVLVAQYDFDLVQLVVMTVFLHGVLE--IYMTQPMGFK 479
+ G D+N+VFSPVVK+SSIR L +VA +D +L QL V T FLHG LE IYM QP GF
Sbjct: 895 IPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFI 954
Query: 478 AAGKEELVCKLKKSLYGLKQSPRQWYKRFDSFMTGKGYTRSPYDPCVYLQKQPNGEYIYL 299
GKE+ VCKLK+SLYGLKQSPRQW KRFDSFM + RS YD CVY+ K NG IYL
Sbjct: 955 VPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYI-KHVNGSPIYL 1013
Query: 298 LLYVDDMLIASKDSVAIAKLKSQLSSEFEMKDFWEAKKI*GMKIERDRKKGRLCLTQKGY 119
LLYVDDMLIA+K + I KLK LSSEF+MKD AKKI GM+I RDRK G L L+Q Y
Sbjct: 1014 LLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNY 1073
Query: 118 LRKMFQKFDFDSETKAVNTPLAPYFKFSAKMSSKT 14
++K+ Q+F+ + KAV+TP+AP+FK SA T
Sbjct: 1074 IKKVLQRFNMQN-AKAVSTPIAPHFKLSAAQCPST 1107
Score = 64.3 bits (155), Expect = 2e-07
Identities = 31/53 (58%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = -1
Query: 938 VGGVDFNEVFSPVVKRHSVRILLALMAQYDFDLIQLDVKIVFLHDDLEE-IYM 783
+ GVD+N+VFSPVVK S+R L+++A +D +L QLDVK FLH +LEE IYM
Sbjct: 895 IPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYM 947
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 244 bits (624), Expect = 5e-69
Identities = 130/211 (61%), Positives = 159/211 (75%), Gaps = 2/211 (0%)
Frame = -2
Query: 652 VGGGDFNEVFSPVVKYSSIRILLVLVAQYDFDLVQLVVMTVFLHGVLE--IYMTQPMGFK 479
+ G DFN+VFSPVVK+SSIR LL +VA +D++L Q+ V T FLHG LE IYM QP GF
Sbjct: 864 IPGIDFNDVFSPVVKHSSIRTLLGIVAMHDYELEQMNVKTAFLHGELEEDIYMEQPEGFV 923
Query: 478 AAGKEELVCKLKKSLYGLKQSPRQWYKRFDSFMTGKGYTRSPYDPCVYLQKQPNGEYIYL 299
GKE LVC+LKKSLYGLKQSPRQWYKRFDSFM + + S YD CVYL K +G IYL
Sbjct: 924 VPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRISNYDSCVYL-KVVDGSVIYL 982
Query: 298 LLYVDDMLIASKDSVAIAKLKSQLSSEFEMKDFWEAKKI*GMKIERDRKKGRLCLTQKGY 119
LLYVDDMLIA+KD I KLK+QLSSEFEMKD AKKI GM+I R+R G+L L+QKGY
Sbjct: 983 LLYVDDMLIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKGY 1042
Query: 118 LRKMFQKFDFDSETKAVNTPLAPYFKFSAKM 26
+ K+ ++F+ + K V+TPLA +F+ S+ +
Sbjct: 1043 IEKVLRRFNM-HDAKPVSTPLAAHFRLSSDL 1072
Score = 64.7 bits (156), Expect(2) = 1e-12
Identities = 30/53 (56%), Positives = 42/53 (79%), Gaps = 1/53 (1%)
Frame = -1
Query: 938 VGGVDFNEVFSPVVKRHSVRILLALMAQYDFDLIQLDVKIVFLHDDLEE-IYM 783
+ G+DFN+VFSPVVK S+R LL ++A +D++L Q++VK FLH +LEE IYM
Sbjct: 864 IPGIDFNDVFSPVVKHSSIRTLLGIVAMHDYELEQMNVKTAFLHGELEEDIYM 916
Score = 38.1 bits (87), Expect(2) = 1e-12
Identities = 22/42 (52%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Frame = -2
Query: 1060 ELSKLPVGKKVIGCKCVY-AKEGF-PSEGIRFKTRLVVKSYA 941
EL KLP KK I CK ++ KEG PS+ R+K RLV K Y+
Sbjct: 821 ELVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYS 862
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gb|AAU89150.1| integrase core domain containing protein [Oryza sativa Japonica
Group]
gb|ABF98081.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1322
Score = 244 bits (623), Expect = 8e-69
Identities = 129/218 (59%), Positives = 156/218 (71%), Gaps = 2/218 (0%)
Frame = -2
Query: 652 VGGGDFNEVFSPVVKYSSIRILLVLVAQYDFDLVQLVVMTVFLHGVLE--IYMTQPMGFK 479
+ G D+N+VFSPVVK+SSIR +V +D +L QL V T FLHG LE IYM QP GF
Sbjct: 882 IAGVDYNDVFSPVVKHSSIRTFFSIVTMHDLELEQLDVKTTFLHGELEEEIYMDQPEGFI 941
Query: 478 AAGKEELVCKLKKSLYGLKQSPRQWYKRFDSFMTGKGYTRSPYDPCVYLQKQPNGEYIYL 299
GKE+ VCKLK+SLYGLKQSPRQWYKRFDSFM G+ RS +D CVY+ K NG IYL
Sbjct: 942 VPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYI-KFVNGSPIYL 1000
Query: 298 LLYVDDMLIASKDSVAIAKLKSQLSSEFEMKDFWEAKKI*GMKIERDRKKGRLCLTQKGY 119
LLYVDDMLIA+K I LK QLSSEF+MKD AKKI GM+I RDR G L L+Q+ Y
Sbjct: 1001 LLYVDDMLIAAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEITRDRNSGLLFLSQQSY 1060
Query: 118 LRKMFQKFDFDSETKAVNTPLAPYFKFSAKMSSKTVED 5
++K+ Q+F+ + K V+TP+AP+FK SA + T ED
Sbjct: 1061 IKKVLQRFNM-HDAKPVSTPIAPHFKLSALQCASTDED 1097
Score = 62.4 bits (150), Expect(2) = 3e-11
Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Frame = -1
Query: 956 SKKLCVVGGVDFNEVFSPVVKRHSVRILLALMAQYDFDLIQLDVKIVFLHDDL-EEIYM 783
+K + GVD+N+VFSPVVK S+R +++ +D +L QLDVK FLH +L EEIYM
Sbjct: 876 AKGFSQIAGVDYNDVFSPVVKHSSIRTFFSIVTMHDLELEQLDVKTTFLHGELEEEIYM 934
Score = 35.4 bits (80), Expect(2) = 3e-11
Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = -2
Query: 1060 ELSKLPVGKKVIGCKCVYA-KEGF-PSEGIRFKTRLVVKSYA 941
EL LP KK + CK ++ KEG PSE RFK RLV K ++
Sbjct: 839 ELVHLPKQKKPVRCKWIFKRKEGLSPSEPPRFKVRLVAKGFS 880
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 244 bits (623), Expect = 8e-69
Identities = 129/209 (61%), Positives = 154/209 (73%), Gaps = 2/209 (0%)
Frame = -2
Query: 652 VGGGDFNEVFSPVVKYSSIRILLVLVAQYDFDLVQLVVMTVFLHGVLE--IYMTQPMGFK 479
+ G D+N+VFSPVVK+SSIR L +VA +D +L QL V T FLHG LE IYM QP GF
Sbjct: 893 IPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFI 952
Query: 478 AAGKEELVCKLKKSLYGLKQSPRQWYKRFDSFMTGKGYTRSPYDPCVYLQKQPNGEYIYL 299
GKE+ VCKLK+SLYGLKQSPRQW KRFDSFM + RS YD CVY+ K NG IYL
Sbjct: 953 VPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYI-KHVNGSPIYL 1011
Query: 298 LLYVDDMLIASKDSVAIAKLKSQLSSEFEMKDFWEAKKI*GMKIERDRKKGRLCLTQKGY 119
LLYVDDMLIA+K + I KLK LSSEF+MKD AKKI GM+I RDRK G L L+Q Y
Sbjct: 1012 LLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNY 1071
Query: 118 LRKMFQKFDFDSETKAVNTPLAPYFKFSA 32
++K+ Q+F+ + KAV+TP+AP+FK SA
Sbjct: 1072 IKKVLQRFNMQN-AKAVSTPIAPHFKLSA 1099
Score = 64.3 bits (155), Expect = 2e-07
Identities = 31/53 (58%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = -1
Query: 938 VGGVDFNEVFSPVVKRHSVRILLALMAQYDFDLIQLDVKIVFLHDDLEE-IYM 783
+ GVD+N+VFSPVVK S+R L+++A +D +L QLDVK FLH +LEE IYM
Sbjct: 893 IPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYM 945
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
gb|ABA92739.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1373
Score = 244 bits (623), Expect = 8e-69
Identities = 129/209 (61%), Positives = 154/209 (73%), Gaps = 2/209 (0%)
Frame = -2
Query: 652 VGGGDFNEVFSPVVKYSSIRILLVLVAQYDFDLVQLVVMTVFLHGVLE--IYMTQPMGFK 479
+ G D+N+VFSPVVK+SSIR L +VA +D +L QL V T FLHG LE IYM QP GF
Sbjct: 893 IPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFI 952
Query: 478 AAGKEELVCKLKKSLYGLKQSPRQWYKRFDSFMTGKGYTRSPYDPCVYLQKQPNGEYIYL 299
GKE+ VCKLK+SLYGLKQSPRQW KRFDSFM + RS YD CVY+ K NG IYL
Sbjct: 953 VPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYI-KHVNGSPIYL 1011
Query: 298 LLYVDDMLIASKDSVAIAKLKSQLSSEFEMKDFWEAKKI*GMKIERDRKKGRLCLTQKGY 119
LLYVDDMLIA+K + I KLK LSSEF+MKD AKKI GM+I RDRK G L L+Q Y
Sbjct: 1012 LLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNY 1071
Query: 118 LRKMFQKFDFDSETKAVNTPLAPYFKFSA 32
++K+ Q+F+ + KAV+TP+AP+FK SA
Sbjct: 1072 IKKVLQRFNMQN-AKAVSTPIAPHFKLSA 1099
Score = 64.3 bits (155), Expect = 2e-07
Identities = 31/53 (58%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = -1
Query: 938 VGGVDFNEVFSPVVKRHSVRILLALMAQYDFDLIQLDVKIVFLHDDLEE-IYM 783
+ GVD+N+VFSPVVK S+R L+++A +D +L QLDVK FLH +LEE IYM
Sbjct: 893 IPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYM 945
>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
Group]
gb|AAN04164.1| Putative retrotransposon protein [Oryza sativa Japonica Group]
gb|AAP53029.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 1229
Score = 243 bits (621), Expect = 1e-68
Identities = 128/218 (58%), Positives = 158/218 (72%), Gaps = 2/218 (0%)
Frame = -2
Query: 652 VGGGDFNEVFSPVVKYSSIRILLVLVAQYDFDLVQLVVMTVFLHGVLE--IYMTQPMGFK 479
+ G D+N+VFSPVVK+SSIR +VA +D +L QL V T+FLHG LE IYM QP GF
Sbjct: 828 IAGVDYNDVFSPVVKHSSIRTFFCIVAMHDLELEQLDVKTIFLHGELEEEIYMDQPEGFI 887
Query: 478 AAGKEELVCKLKKSLYGLKQSPRQWYKRFDSFMTGKGYTRSPYDPCVYLQKQPNGEYIYL 299
GKE+ VCKLK+SLYGLKQSPRQWYKRFDSFM G+ RS +D CVY+ K NG +IYL
Sbjct: 888 VPGKEDDVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYI-KFVNGSHIYL 946
Query: 298 LLYVDDMLIASKDSVAIAKLKSQLSSEFEMKDFWEAKKI*GMKIERDRKKGRLCLTQKGY 119
LLYVDDMLIA+K I LK QLSSEF+MKD +KKI GM+I RD G L L+Q+ Y
Sbjct: 947 LLYVDDMLIAAKSKEQITTLKKQLSSEFDMKDLVASKKILGMEITRDINSGLLFLSQQSY 1006
Query: 118 LRKMFQKFDFDSETKAVNTPLAPYFKFSAKMSSKTVED 5
++K+ Q+F+ + K V+TP+AP+FK SA + T ED
Sbjct: 1007 IKKVLQRFNI-HDAKPVSTPIAPHFKLSALQCTSTDED 1043
Score = 64.7 bits (156), Expect = 1e-07
Identities = 31/59 (52%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = -1
Query: 956 SKKLCVVGGVDFNEVFSPVVKRHSVRILLALMAQYDFDLIQLDVKIVFLHDDL-EEIYM 783
+K + GVD+N+VFSPVVK S+R ++A +D +L QLDVK +FLH +L EEIYM
Sbjct: 822 AKGFSQIAGVDYNDVFSPVVKHSSIRTFFCIVAMHDLELEQLDVKTIFLHGELEEEIYM 880
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 243 bits (621), Expect = 1e-68
Identities = 131/218 (60%), Positives = 161/218 (73%), Gaps = 2/218 (0%)
Frame = -2
Query: 652 VGGGDFNEVFSPVVKYSSIRILLVLVAQYDFDLVQLVVMTVFLHGVLE--IYMTQPMGFK 479
+ G DFN+VFSPVVK+SSIR LL +VA +D++L Q+ V T FLHG LE IYM QP GF
Sbjct: 801 IPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFV 860
Query: 478 AAGKEELVCKLKKSLYGLKQSPRQWYKRFDSFMTGKGYTRSPYDPCVYLQKQPNGEYIYL 299
GKE LVC+LKKSLYGLKQSPRQWYKRFDSFM + + RS YD CVYL K +G IYL
Sbjct: 861 VPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYL-KVVDGSAIYL 919
Query: 298 LLYVDDMLIASKDSVAIAKLKSQLSSEFEMKDFWEAKKI*GMKIERDRKKGRLCLTQKGY 119
LLYVDDMLIA+KD IAKLK+QLSSEFEMKD AKKI GM+I R+R G+L L+QK Y
Sbjct: 920 LLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKCY 979
Query: 118 LRKMFQKFDFDSETKAVNTPLAPYFKFSAKMSSKTVED 5
+ K+ +F+ + K V+T LA +F+ S+ + ++ D
Sbjct: 980 IEKVLHRFNM-HDAKLVSTLLAAHFRLSSDLCPQSAYD 1016
Score = 67.0 bits (162), Expect(2) = 1e-13
Identities = 31/53 (58%), Positives = 43/53 (81%), Gaps = 1/53 (1%)
Frame = -1
Query: 938 VGGVDFNEVFSPVVKRHSVRILLALMAQYDFDLIQLDVKIVFLHDDLEE-IYM 783
+ G+DFN+VFSPVVK S+R LL+++A +D++L Q+DVK FLH +LEE IYM
Sbjct: 801 IPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYM 853
Score = 38.9 bits (89), Expect(2) = 1e-13
Identities = 22/42 (52%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Frame = -2
Query: 1060 ELSKLPVGKKVIGCKCVY-AKEGF-PSEGIRFKTRLVVKSYA 941
EL KLP KK I CK ++ KEG PS+ R+K RLV K Y+
Sbjct: 758 ELEKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYS 799
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 241 bits (616), Expect = 5e-68
Identities = 130/218 (59%), Positives = 162/218 (74%), Gaps = 2/218 (0%)
Frame = -2
Query: 652 VGGGDFNEVFSPVVKYSSIRILLVLVAQYDFDLVQLVVMTVFLHGVLE--IYMTQPMGFK 479
+ G DFN+VFSPV+K+SSIR LL +VA +D++L Q+ V T FLHG LE IYM QP GF
Sbjct: 771 IPGIDFNDVFSPVLKHSSIRTLLSIVAVHDYELEQMDVKTAFLHGELEEDIYMEQPEGFV 830
Query: 478 AAGKEELVCKLKKSLYGLKQSPRQWYKRFDSFMTGKGYTRSPYDPCVYLQKQPNGEYIYL 299
GKE LV +LKKSLYGLKQSPRQWYKRFDSFM + + RS YD CVYL K +G IYL
Sbjct: 831 VPGKENLVYRLKKSLYGLKQSPRQWYKRFDSFMFSQKFRRSNYDSCVYL-KVVDGSSIYL 889
Query: 298 LLYVDDMLIASKDSVAIAKLKSQLSSEFEMKDFWEAKKI*GMKIERDRKKGRLCLTQKGY 119
LLYVDDMLIA+KD I KLK+QLSSEFEMKD AKKI GM+I R+R G+L L+QKGY
Sbjct: 890 LLYVDDMLIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKGY 949
Query: 118 LRKMFQKFDFDSETKAVNTPLAPYFKFSAKMSSKTVED 5
+ K+ ++F+ + K V+TPLA +F+ S+ + ++ D
Sbjct: 950 IEKVLRRFNM-HDAKPVSTPLAAHFRLSSDLCPQSDYD 986
Score = 65.1 bits (157), Expect(2) = 2e-12
Identities = 30/53 (56%), Positives = 43/53 (81%), Gaps = 1/53 (1%)
Frame = -1
Query: 938 VGGVDFNEVFSPVVKRHSVRILLALMAQYDFDLIQLDVKIVFLHDDLEE-IYM 783
+ G+DFN+VFSPV+K S+R LL+++A +D++L Q+DVK FLH +LEE IYM
Sbjct: 771 IPGIDFNDVFSPVLKHSSIRTLLSIVAVHDYELEQMDVKTAFLHGELEEDIYM 823
Score = 36.6 bits (83), Expect(2) = 2e-12
Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Frame = -2
Query: 1060 ELSKLPVGKKVIGCKCVY-AKEGF-PSEGIRFKTRLVVKSYA 941
EL KLP KK I CK ++ K+G PS+ R+K RLV K Y+
Sbjct: 728 ELVKLPKEKKPIRCKWIFKRKKGMSPSDEARYKARLVAKGYS 769