BLASTX nr result

ID: Ophiopogon25_contig00015882 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00015882
         (800 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020254926.1| double-stranded RNA-binding protein 8-like [...    94   9e-19

>ref|XP_020254926.1| double-stranded RNA-binding protein 8-like [Asparagus officinalis]
 gb|ONK78722.1| uncharacterized protein A4U43_C02F21750 [Asparagus officinalis]
          Length = 336

 Score = 94.4 bits (233), Expect = 9e-19
 Identities = 52/98 (53%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
 Frame = -1

Query: 644 GDMAEKSENGESLNPLNKGVDASMASSRD-ENEQGSGMMKDEPRSQTNELTPSAMETNGS 468
           GD + K EN    NP++K  + SM S+ D ENE+G+  M ++P++Q +E   SA++TNGS
Sbjct: 236 GDKSAKPENDVPHNPVDKMEEVSMISNGDDENERGNVGMNNKPQTQADESIASAIDTNGS 295

Query: 467 CKDEKQDGSAITIAGRFEEPREGKIMDLASVQEVKADA 354
           CKDEKQ  SA     RFEEP+EG+IMD  S+QEVKADA
Sbjct: 296 CKDEKQYESAEIKPERFEEPQEGEIMDSLSMQEVKADA 333


Top