BLASTX nr result
ID: Ophiopogon25_contig00015825
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00015825
(741 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK65745.1| uncharacterized protein A4U43_C06F490 [Asparagus ... 118 1e-27
ref|XP_020269289.1| twinkle homolog protein, chloroplastic/mitoc... 118 1e-26
ref|XP_020996311.1| twinkle homolog protein, chloroplastic/mitoc... 86 2e-15
ref|XP_020976013.1| twinkle homolog protein, chloroplastic/mitoc... 86 2e-15
ref|XP_016197033.1| twinkle homolog protein, chloroplastic/mitoc... 86 2e-15
gb|ERN14768.1| hypothetical protein AMTR_s00032p00034370 [Ambore... 85 5e-15
ref|XP_006853301.2| twinkle homolog protein, chloroplastic/mitoc... 85 5e-15
ref|XP_018673646.1| PREDICTED: twinkle homolog protein, chloropl... 84 9e-15
ref|XP_018673645.1| PREDICTED: twinkle homolog protein, chloropl... 84 9e-15
ref|XP_009419634.2| PREDICTED: twinkle homolog protein, chloropl... 84 9e-15
gb|OAY71515.1| Twinkle protein, chloroplastic/mitochondrial, par... 82 3e-14
ref|XP_019711175.1| PREDICTED: twinkle homolog protein, chloropl... 82 3e-14
ref|XP_020109257.1| twinkle homolog protein, chloroplastic/mitoc... 82 3e-14
ref|XP_020109256.1| twinkle homolog protein, chloroplastic/mitoc... 82 3e-14
ref|XP_019711174.1| PREDICTED: twinkle homolog protein, chloropl... 82 3e-14
ref|XP_020586477.1| twinkle homolog protein, chloroplastic/mitoc... 82 4e-14
ref|XP_020586476.1| twinkle homolog protein, chloroplastic/mitoc... 82 4e-14
gb|PNX78470.1| nucleic acid binding protein, partial [Trifolium ... 76 5e-14
gb|PKA64060.1| Twinkle like protein, chloroplastic/mitochondrial... 81 8e-14
gb|OQU80374.1| hypothetical protein SORBI_3007G116950 [Sorghum b... 80 1e-13
>gb|ONK65745.1| uncharacterized protein A4U43_C06F490 [Asparagus officinalis]
Length = 379
Score = 118 bits (296), Expect = 1e-27
Identities = 56/71 (78%), Positives = 59/71 (83%)
Frame = -1
Query: 213 CEGGESKEKSLSFFIREDGGLAMWRCFRGKCGWSGSIQDGKMLNVGPAQTSKGKKYRVLI 34
C+GGESKEKS S FIREDG AMWRCFRGKCGWSG IQDGKMLNVG +QT K K YRVL
Sbjct: 106 CKGGESKEKSFSIFIREDGRGAMWRCFRGKCGWSGCIQDGKMLNVGSSQTLKSKGYRVLT 165
Query: 33 EQGLQLEPLCE 1
E+ LQLEPL E
Sbjct: 166 EEDLQLEPLSE 176
>ref|XP_020269289.1| twinkle homolog protein, chloroplastic/mitochondrial [Asparagus
officinalis]
Length = 679
Score = 118 bits (296), Expect = 1e-26
Identities = 56/71 (78%), Positives = 59/71 (83%)
Frame = -1
Query: 213 CEGGESKEKSLSFFIREDGGLAMWRCFRGKCGWSGSIQDGKMLNVGPAQTSKGKKYRVLI 34
C+GGESKEKS S FIREDG AMWRCFRGKCGWSG IQDGKMLNVG +QT K K YRVL
Sbjct: 121 CKGGESKEKSFSIFIREDGRGAMWRCFRGKCGWSGCIQDGKMLNVGSSQTLKSKGYRVLT 180
Query: 33 EQGLQLEPLCE 1
E+ LQLEPL E
Sbjct: 181 EEDLQLEPLSE 191
>ref|XP_020996311.1| twinkle homolog protein, chloroplastic/mitochondrial [Arachis
duranensis]
Length = 688
Score = 86.3 bits (212), Expect = 2e-15
Identities = 42/73 (57%), Positives = 49/73 (67%), Gaps = 3/73 (4%)
Frame = -1
Query: 213 CEGGESKEKSLSFFIREDGGLAMWRCFRGKCGWSGSIQ---DGKMLNVGPAQTSKGKKYR 43
CEGGES E+SLS FI DGG A W CFRGKCGW GS Q D L+ +Q ++ KK R
Sbjct: 123 CEGGESGERSLSLFIAHDGGSAAWVCFRGKCGWRGSTQAFADSHSLSTATSQVAQVKKKR 182
Query: 42 VLIEQGLQLEPLC 4
+ E+ LQLEPLC
Sbjct: 183 EITEEELQLEPLC 195
>ref|XP_020976013.1| twinkle homolog protein, chloroplastic/mitochondrial isoform X3
[Arachis ipaensis]
Length = 630
Score = 85.9 bits (211), Expect = 2e-15
Identities = 42/73 (57%), Positives = 49/73 (67%), Gaps = 3/73 (4%)
Frame = -1
Query: 213 CEGGESKEKSLSFFIREDGGLAMWRCFRGKCGWSGSIQ---DGKMLNVGPAQTSKGKKYR 43
CEGGES E+SLS FI DGG A W CFRGKCGW GS Q D L+ +Q ++ KK R
Sbjct: 123 CEGGESGERSLSLFIAHDGGSAAWVCFRGKCGWRGSTQAFADSHSLSTATSQVAQIKKKR 182
Query: 42 VLIEQGLQLEPLC 4
+ E+ LQLEPLC
Sbjct: 183 EITEEELQLEPLC 195
>ref|XP_016197033.1| twinkle homolog protein, chloroplastic/mitochondrial isoform X2
[Arachis ipaensis]
Length = 691
Score = 85.9 bits (211), Expect = 2e-15
Identities = 42/73 (57%), Positives = 49/73 (67%), Gaps = 3/73 (4%)
Frame = -1
Query: 213 CEGGESKEKSLSFFIREDGGLAMWRCFRGKCGWSGSIQ---DGKMLNVGPAQTSKGKKYR 43
CEGGES E+SLS FI DGG A W CFRGKCGW GS Q D L+ +Q ++ KK R
Sbjct: 123 CEGGESGERSLSLFIAHDGGSAAWVCFRGKCGWRGSTQAFADSHSLSTATSQVAQIKKKR 182
Query: 42 VLIEQGLQLEPLC 4
+ E+ LQLEPLC
Sbjct: 183 EITEEELQLEPLC 195
>gb|ERN14768.1| hypothetical protein AMTR_s00032p00034370 [Amborella trichopoda]
Length = 689
Score = 84.7 bits (208), Expect = 5e-15
Identities = 41/81 (50%), Positives = 49/81 (60%), Gaps = 11/81 (13%)
Frame = -1
Query: 213 CEGGESKEKSLSFFIREDGGLAMWRCFRGKCGWSGSIQDGKMLNVGPAQ----------- 67
CEGG ++E+S S FIREDG +A+W CFRGKCGW G IQ + PA+
Sbjct: 115 CEGGSTRERSFSLFIREDGSMALWTCFRGKCGWRGHIQASSNASYAPAERNEKKQINGDL 174
Query: 66 TSKGKKYRVLIEQGLQLEPLC 4
SK K RVL E+ L LEPLC
Sbjct: 175 NSKKKPSRVLTEKSLGLEPLC 195
>ref|XP_006853301.2| twinkle homolog protein, chloroplastic/mitochondrial [Amborella
trichopoda]
Length = 701
Score = 84.7 bits (208), Expect = 5e-15
Identities = 41/81 (50%), Positives = 49/81 (60%), Gaps = 11/81 (13%)
Frame = -1
Query: 213 CEGGESKEKSLSFFIREDGGLAMWRCFRGKCGWSGSIQDGKMLNVGPAQ----------- 67
CEGG ++E+S S FIREDG +A+W CFRGKCGW G IQ + PA+
Sbjct: 127 CEGGSTRERSFSLFIREDGSMALWTCFRGKCGWRGHIQASSNASYAPAERNEKKQINGDL 186
Query: 66 TSKGKKYRVLIEQGLQLEPLC 4
SK K RVL E+ L LEPLC
Sbjct: 187 NSKKKPSRVLTEKSLGLEPLC 207
>ref|XP_018673646.1| PREDICTED: twinkle homolog protein,
chloroplastic/mitochondrial-like isoform X3 [Musa
acuminata subsp. malaccensis]
Length = 693
Score = 84.0 bits (206), Expect = 9e-15
Identities = 41/73 (56%), Positives = 49/73 (67%), Gaps = 3/73 (4%)
Frame = -1
Query: 213 CEGGESKEKSLSFFIREDGGLAMWRCFRGKCGWSGSIQDGKMLNVGPA---QTSKGKKYR 43
C+GG SKE+ LSFFI DG LA+W CFR KCGW GS++ + +G A QT K YR
Sbjct: 126 CQGGSSKERCLSFFINVDGELAIWMCFRAKCGWRGSVRAFEECKIGYAKTRQTLKLNDYR 185
Query: 42 VLIEQGLQLEPLC 4
V+ E LQLEPLC
Sbjct: 186 VITEIDLQLEPLC 198
>ref|XP_018673645.1| PREDICTED: twinkle homolog protein,
chloroplastic/mitochondrial-like isoform X2 [Musa
acuminata subsp. malaccensis]
Length = 719
Score = 84.0 bits (206), Expect = 9e-15
Identities = 41/73 (56%), Positives = 49/73 (67%), Gaps = 3/73 (4%)
Frame = -1
Query: 213 CEGGESKEKSLSFFIREDGGLAMWRCFRGKCGWSGSIQDGKMLNVGPA---QTSKGKKYR 43
C+GG SKE+ LSFFI DG LA+W CFR KCGW GS++ + +G A QT K YR
Sbjct: 126 CQGGSSKERCLSFFINVDGELAIWMCFRAKCGWRGSVRAFEECKIGYAKTRQTLKLNDYR 185
Query: 42 VLIEQGLQLEPLC 4
V+ E LQLEPLC
Sbjct: 186 VITEIDLQLEPLC 198
>ref|XP_009419634.2| PREDICTED: twinkle homolog protein,
chloroplastic/mitochondrial-like isoform X1 [Musa
acuminata subsp. malaccensis]
Length = 719
Score = 84.0 bits (206), Expect = 9e-15
Identities = 41/73 (56%), Positives = 49/73 (67%), Gaps = 3/73 (4%)
Frame = -1
Query: 213 CEGGESKEKSLSFFIREDGGLAMWRCFRGKCGWSGSIQDGKMLNVGPA---QTSKGKKYR 43
C+GG SKE+ LSFFI DG LA+W CFR KCGW GS++ + +G A QT K YR
Sbjct: 126 CQGGSSKERCLSFFINVDGELAIWMCFRAKCGWRGSVRAFEECKIGYAKTRQTLKLNDYR 185
Query: 42 VLIEQGLQLEPLC 4
V+ E LQLEPLC
Sbjct: 186 VITEIDLQLEPLC 198
>gb|OAY71515.1| Twinkle protein, chloroplastic/mitochondrial, partial [Ananas
comosus]
Length = 496
Score = 82.4 bits (202), Expect = 3e-14
Identities = 37/74 (50%), Positives = 52/74 (70%), Gaps = 3/74 (4%)
Frame = -1
Query: 213 CEGGESKEKSLSFFIREDGGLAMWRCFRGKCGWSGSIQ---DGKMLNVGPAQTSKGKKYR 43
C+GG S E+SLS +IREDGGLA+W+CFRGKCGW G + D + + K K++R
Sbjct: 1 CKGGSSMERSLSVYIREDGGLALWKCFRGKCGWKGHAEPYGDVTTQFIRERPSLKVKEHR 60
Query: 42 VLIEQGLQLEPLCE 1
++ E+ L+LEPLC+
Sbjct: 61 IINEEDLELEPLCK 74
>ref|XP_019711175.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
isoform X2 [Elaeis guineensis]
Length = 690
Score = 82.4 bits (202), Expect = 3e-14
Identities = 42/74 (56%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Frame = -1
Query: 213 CEGGESKEKSLSFFIREDGGLAMWRCFRGKCGWSGSIQ---DGKMLNVGPAQTSKGKKYR 43
C+GG S+EKSLS FIRED LAMW CFR KCGW G + + K N G Q + K+YR
Sbjct: 130 CKGGLSEEKSLSLFIREDLQLAMWSCFRAKCGWRGVAKASGEMKAYNPGANQPLQVKEYR 189
Query: 42 VLIEQGLQLEPLCE 1
+ E+ LQLEPLCE
Sbjct: 190 KISERDLQLEPLCE 203
>ref|XP_020109257.1| twinkle homolog protein, chloroplastic/mitochondrial isoform X2
[Ananas comosus]
Length = 697
Score = 82.4 bits (202), Expect = 3e-14
Identities = 37/74 (50%), Positives = 52/74 (70%), Gaps = 3/74 (4%)
Frame = -1
Query: 213 CEGGESKEKSLSFFIREDGGLAMWRCFRGKCGWSGSIQ---DGKMLNVGPAQTSKGKKYR 43
C+GG S E+SLS +IREDGGLA+W+CFRGKCGW G + D + + K K++R
Sbjct: 130 CKGGSSMERSLSVYIREDGGLALWKCFRGKCGWKGHAEPYGDVTTQFIRERPSLKVKEHR 189
Query: 42 VLIEQGLQLEPLCE 1
++ E+ L+LEPLC+
Sbjct: 190 IINEEDLELEPLCK 203
>ref|XP_020109256.1| twinkle homolog protein, chloroplastic/mitochondrial isoform X1
[Ananas comosus]
Length = 698
Score = 82.4 bits (202), Expect = 3e-14
Identities = 37/74 (50%), Positives = 52/74 (70%), Gaps = 3/74 (4%)
Frame = -1
Query: 213 CEGGESKEKSLSFFIREDGGLAMWRCFRGKCGWSGSIQ---DGKMLNVGPAQTSKGKKYR 43
C+GG S E+SLS +IREDGGLA+W+CFRGKCGW G + D + + K K++R
Sbjct: 130 CKGGSSMERSLSVYIREDGGLALWKCFRGKCGWKGHAEPYGDVTTQFIRERPSLKVKEHR 189
Query: 42 VLIEQGLQLEPLCE 1
++ E+ L+LEPLC+
Sbjct: 190 IINEEDLELEPLCK 203
>ref|XP_019711174.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
isoform X1 [Elaeis guineensis]
Length = 699
Score = 82.4 bits (202), Expect = 3e-14
Identities = 42/74 (56%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Frame = -1
Query: 213 CEGGESKEKSLSFFIREDGGLAMWRCFRGKCGWSGSIQ---DGKMLNVGPAQTSKGKKYR 43
C+GG S+EKSLS FIRED LAMW CFR KCGW G + + K N G Q + K+YR
Sbjct: 130 CKGGLSEEKSLSLFIREDLQLAMWSCFRAKCGWRGVAKASGEMKAYNPGANQPLQVKEYR 189
Query: 42 VLIEQGLQLEPLCE 1
+ E+ LQLEPLCE
Sbjct: 190 KISERDLQLEPLCE 203
>ref|XP_020586477.1| twinkle homolog protein, chloroplastic/mitochondrial-like isoform
X2 [Phalaenopsis equestris]
Length = 692
Score = 82.0 bits (201), Expect = 4e-14
Identities = 40/80 (50%), Positives = 52/80 (65%), Gaps = 10/80 (12%)
Frame = -1
Query: 213 CEGGESKEKSLSFFIREDGGLAMWRCFRGKCGWSGSIQDGK------MLNVGPAQTSKG- 55
C GG+SKEKS S FIREDG +A+W CFR KCGW G ++ + +L+ ++TS G
Sbjct: 117 CGGGDSKEKSFSLFIREDGKIALWSCFRAKCGWKGCVKTSENEEKYIVLHSFGSETSDGS 176
Query: 54 ---KKYRVLIEQGLQLEPLC 4
KKYR + E+ L LEPLC
Sbjct: 177 LMRKKYRTISEEDLHLEPLC 196
>ref|XP_020586476.1| twinkle homolog protein, chloroplastic/mitochondrial-like isoform
X1 [Phalaenopsis equestris]
Length = 699
Score = 82.0 bits (201), Expect = 4e-14
Identities = 40/80 (50%), Positives = 52/80 (65%), Gaps = 10/80 (12%)
Frame = -1
Query: 213 CEGGESKEKSLSFFIREDGGLAMWRCFRGKCGWSGSIQDGK------MLNVGPAQTSKG- 55
C GG+SKEKS S FIREDG +A+W CFR KCGW G ++ + +L+ ++TS G
Sbjct: 124 CGGGDSKEKSFSLFIREDGKIALWSCFRAKCGWKGCVKTSENEEKYIVLHSFGSETSDGS 183
Query: 54 ---KKYRVLIEQGLQLEPLC 4
KKYR + E+ L LEPLC
Sbjct: 184 LMRKKYRTISEEDLHLEPLC 203
>gb|PNX78470.1| nucleic acid binding protein, partial [Trifolium pratense]
Length = 102
Score = 75.9 bits (185), Expect = 5e-14
Identities = 38/74 (51%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Frame = -1
Query: 213 CEGGESKEKSLSFFIREDGGLAMWRCFRGKCGWSGSIQ----DGKMLNVGPAQTSKGKKY 46
C+GG++ EKSLS +I DGG A W CFRGKCGW GS Q + Q KK
Sbjct: 1 CQGGDTVEKSLSIYIPPDGGSAAWVCFRGKCGWKGSTQAFAGSSSSYSTAMNQLIPAKKK 60
Query: 45 RVLIEQGLQLEPLC 4
R L E+ LQLEPLC
Sbjct: 61 RQLNEEDLQLEPLC 74
>gb|PKA64060.1| Twinkle like protein, chloroplastic/mitochondrial [Apostasia
shenzhenica]
Length = 696
Score = 81.3 bits (199), Expect = 8e-14
Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 7/77 (9%)
Frame = -1
Query: 213 CEGGESKEKSLSFFIREDGGLAMWRCFRGKCGWSGSIQDGK-------MLNVGPAQTSKG 55
C GG+S+E+S + FI EDG LAMW+CFR KC W G I+D + + G + K
Sbjct: 131 CRGGDSRERSFALFIHEDGKLAMWQCFRKKCDWKGCIEDSENGEGFRVSRSFGSGRALKN 190
Query: 54 KKYRVLIEQGLQLEPLC 4
KKY ++ E+ LQLEPLC
Sbjct: 191 KKYIMITEEDLQLEPLC 207
>gb|OQU80374.1| hypothetical protein SORBI_3007G116950 [Sorghum bicolor]
Length = 415
Score = 80.1 bits (196), Expect = 1e-13
Identities = 37/55 (67%), Positives = 50/55 (90%)
Frame = -3
Query: 409 SGEAMILASLAKPKKADEQKLLNKLSVGMEEFQCIVEERNRDAVAPKQKEILQYI 245
+G ++ILA LA+PK+A+ ++LLNKL+VG+EE Q IVE+RNRDAVAPKQKE+LQY+
Sbjct: 134 NGRSLILAGLAEPKRANGEELLNKLAVGLEELQRIVEDRNRDAVAPKQKELLQYV 188