BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00015718
         (630 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEX94833.1| RNA polymerase beta' subunit (chloroplast) [Ophio...   431   e-139
gb|ABD93802.1| RNA polymerase beta chain, partial (chloroplast) ...   416   e-138
gb|AEX94832.1| RNA polymerase beta' subunit (chloroplast) [Lirio...   428   e-138
ref|YP_009183189.1| RNA polymerase beta' subunit (chloroplast) [...   421   e-135
gb|AEX94830.1| RNA polymerase beta' subunit (chloroplast) [Dasyl...   421   e-135
gb|ABD93844.1| RNA polymerase beta chain, partial (chloroplast) ...   405   e-135
gb|AEX94836.1| RNA polymerase beta' subunit (chloroplast) [Maian...   420   e-135
ref|YP_009432293.1| RNA polymerase beta' subunit (chloroplast) [...   420   e-135
gb|AEX94829.1| RNA polymerase beta' subunit (chloroplast) [Beauc...   419   e-135
ref|YP_009335323.1| RNA polymerase beta subunit (chloroplast) [N...   419   e-134
ref|YP_009431208.1| RNA polymerase beta' subunit (chloroplast) [...   417   e-134
gb|AEX94834.1| RNA polymerase beta' subunit (chloroplast) [Ruscu...   414   e-132
gb|ABD93833.1| RNA polymerase beta chain, partial (chloroplast) ...   399   e-132
gb|AEX94835.1| RNA polymerase beta' subunit (chloroplast) [Sanse...   410   e-131
ref|YP_009327294.1| RNA polymerase beta'' subunit (chloroplast) ...   409   e-131
ref|YP_009334309.1| RNA polymerase beta subunit (chloroplast) [A...   409   e-131
ref|YP_009335237.1| RNA polymerase beta subunit (chloroplast) [M...   409   e-131
ref|YP_009335578.1| RNA polymerase beta subunit (chloroplast) [Y...   409   e-131
ref|YP_009335154.1| RNA polymerase beta subunit (chloroplast) [H...   407   e-130
ref|YP_009334734.1| RNA polymerase beta subunit (chloroplast) [C...   407   e-130

>gb|AEX94833.1| RNA polymerase beta' subunit (chloroplast) [Ophiopogon japonicus]
          Length = 1381

 Score =  431 bits (1107), Expect = e-139
 Identities = 208/209 (99%), Positives = 208/209 (99%)
 Frame = +3

Query: 3    FVEVRANGLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV 182
            FVEVRAN LIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV
Sbjct: 856  FVEVRANDLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV 915

Query: 183  TQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLG 362
            TQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLG
Sbjct: 916  TQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLG 975

Query: 363  TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN 542
            TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN
Sbjct: 976  TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN 1035

Query: 543  NIILNPSHLNWCFLHYNYCEETSTTISIG 629
            NIILNPSHLNWCFLHYNYCEETSTTISIG
Sbjct: 1036 NIILNPSHLNWCFLHYNYCEETSTTISIG 1064


>gb|ABD93802.1| RNA polymerase beta chain, partial (chloroplast) [Beaucarnea
            recurvata]
          Length = 830

 Score =  416 bits (1069), Expect = e-138
 Identities = 201/209 (96%), Positives = 204/209 (97%)
 Frame = +3

Query: 3    FVEVRANGLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV 182
            FVEVRAN LIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV
Sbjct: 385  FVEVRANDLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV 444

Query: 183  TQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLG 362
            T+HQGTIGTLLNRNKEGQSL ILSSFNCFRV PFNGSKYNNVAKESNPITPI+GLLGPLG
Sbjct: 445  TKHQGTIGTLLNRNKEGQSLRILSSFNCFRVVPFNGSKYNNVAKESNPITPIRGLLGPLG 504

Query: 363  TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN 542
            TIVPKIV FYSSYHLITHNQILLNKYW+LDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN
Sbjct: 505  TIVPKIVKFYSSYHLITHNQILLNKYWVLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN 564

Query: 543  NIILNPSHLNWCFLHYNYCEETSTTISIG 629
            NIILNPSHLNWCFLHYNYCEETST ISIG
Sbjct: 565  NIILNPSHLNWCFLHYNYCEETSTIISIG 593


>gb|AEX94832.1| RNA polymerase beta' subunit (chloroplast) [Liriope spicata]
          Length = 1385

 Score =  428 bits (1100), Expect = e-138
 Identities = 207/209 (99%), Positives = 207/209 (99%)
 Frame = +3

Query: 3    FVEVRANGLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV 182
            FVEVRAN LIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV
Sbjct: 860  FVEVRANDLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV 919

Query: 183  TQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLG 362
            TQHQGTIGTLLNRNKEGQSL ILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLG
Sbjct: 920  TQHQGTIGTLLNRNKEGQSLRILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLG 979

Query: 363  TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN 542
            TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN
Sbjct: 980  TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN 1039

Query: 543  NIILNPSHLNWCFLHYNYCEETSTTISIG 629
            NIILNPSHLNWCFLHYNYCEETSTTISIG
Sbjct: 1040 NIILNPSHLNWCFLHYNYCEETSTTISIG 1068


>ref|YP_009183189.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum
            verticillatum]
 ref|YP_009236350.1| DNA-directed RNA polymerase beta'' chain (chloroplast) [Polygonatum
            sibiricum]
 gb|ALM87707.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum
            verticillatum]
 gb|AMF84063.1| DNA-directed RNA polymerase beta'' chain (chloroplast) [Polygonatum
            sibiricum]
          Length = 1382

 Score =  421 bits (1083), Expect = e-135
 Identities = 204/209 (97%), Positives = 205/209 (98%)
 Frame = +3

Query: 3    FVEVRANGLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV 182
            FVEVRAN LIRDFIRIELVKSTISYT KRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV
Sbjct: 857  FVEVRANDLIRDFIRIELVKSTISYTEKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV 916

Query: 183  TQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLG 362
            TQHQGTIGTLLNRNKEGQSL ILSSFNCFRVGPFNGSKYNNVAKESNPITPI+GLLGPLG
Sbjct: 917  TQHQGTIGTLLNRNKEGQSLRILSSFNCFRVGPFNGSKYNNVAKESNPITPIRGLLGPLG 976

Query: 363  TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN 542
            TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN
Sbjct: 977  TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN 1036

Query: 543  NIILNPSHLNWCFLHYNYCEETSTTISIG 629
            NIILNPSHLNWCFLHYNYCEETST ISIG
Sbjct: 1037 NIILNPSHLNWCFLHYNYCEETSTIISIG 1065


>gb|AEX94830.1| RNA polymerase beta' subunit (chloroplast) [Dasylirion wheeleri]
          Length = 1385

 Score =  421 bits (1082), Expect = e-135
 Identities = 204/209 (97%), Positives = 205/209 (98%)
 Frame = +3

Query: 3    FVEVRANGLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV 182
            FVEVRAN LIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV
Sbjct: 860  FVEVRANDLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV 919

Query: 183  TQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLG 362
            TQHQGTIGTLLNRNKEGQSL ILSSFNCFRV PFNGSKYNNVAKESNPITPI+GLLGPLG
Sbjct: 920  TQHQGTIGTLLNRNKEGQSLRILSSFNCFRVVPFNGSKYNNVAKESNPITPIRGLLGPLG 979

Query: 363  TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN 542
            TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN
Sbjct: 980  TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN 1039

Query: 543  NIILNPSHLNWCFLHYNYCEETSTTISIG 629
            NIILNPSHLNWCFLHYNYCEETST ISIG
Sbjct: 1040 NIILNPSHLNWCFLHYNYCEETSTIISIG 1068


>gb|ABD93844.1| RNA polymerase beta chain, partial (chloroplast) [Agave attenuata]
          Length = 761

 Score =  405 bits (1042), Expect = e-135
 Identities = 196/209 (93%), Positives = 200/209 (95%)
 Frame = +3

Query: 3   FVEVRANGLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV 182
           FVEVRAN LIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSK KIPLV
Sbjct: 318 FVEVRANDLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKGKIPLV 377

Query: 183 TQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLG 362
           TQHQ T+GTLLNRNKE QSLIILSSFNCFRVGPFNGSKY++ AKESNPITPI+ LLGPLG
Sbjct: 378 TQHQETVGTLLNRNKECQSLIILSSFNCFRVGPFNGSKYHDAAKESNPITPIRDLLGPLG 437

Query: 363 TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN 542
           TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNP PCN
Sbjct: 438 TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPGPCN 497

Query: 543 NIILNPSHLNWCFLHYNYCEETSTTISIG 629
           NIILNP HLNWCFLHYNYCEETST ISIG
Sbjct: 498 NIILNPFHLNWCFLHYNYCEETSTIISIG 526


>gb|AEX94836.1| RNA polymerase beta' subunit (chloroplast) [Maianthemum stellatum]
          Length = 1385

 Score =  420 bits (1080), Expect = e-135
 Identities = 204/209 (97%), Positives = 205/209 (98%)
 Frame = +3

Query: 3    FVEVRANGLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV 182
            FVEVRAN LIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV
Sbjct: 860  FVEVRANDLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV 919

Query: 183  TQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLG 362
            TQHQGTIGTLLNRNKEGQSL ILSSFNCFRVGPFNGSKYNNVAKESNPITPI+GLLGPLG
Sbjct: 920  TQHQGTIGTLLNRNKEGQSLRILSSFNCFRVGPFNGSKYNNVAKESNPITPIRGLLGPLG 979

Query: 363  TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN 542
            TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSP N
Sbjct: 980  TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPWN 1039

Query: 543  NIILNPSHLNWCFLHYNYCEETSTTISIG 629
            NIILNPSHLNWCFLHYNYCEETST ISIG
Sbjct: 1040 NIILNPSHLNWCFLHYNYCEETSTIISIG 1068


>ref|YP_009432293.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum stenophyllum]
 gb|ATB18548.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum stenophyllum]
          Length = 1381

 Score =  420 bits (1079), Expect = e-135
 Identities = 203/209 (97%), Positives = 205/209 (98%)
 Frame = +3

Query: 3    FVEVRANGLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV 182
            FVEVRAN LIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKI LV
Sbjct: 856  FVEVRANDLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKISLV 915

Query: 183  TQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLG 362
            TQHQGTIGTLLNRNKEGQSL ILSSFNCFRVGPFNGSKYNNVAKESNPITPI+GLLGPLG
Sbjct: 916  TQHQGTIGTLLNRNKEGQSLRILSSFNCFRVGPFNGSKYNNVAKESNPITPIRGLLGPLG 975

Query: 363  TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN 542
            TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTF+VLEVLKYCLIDENRRIYNPSPCN
Sbjct: 976  TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFKVLEVLKYCLIDENRRIYNPSPCN 1035

Query: 543  NIILNPSHLNWCFLHYNYCEETSTTISIG 629
            NIILNPSHLNWCFLHYNYCEETST ISIG
Sbjct: 1036 NIILNPSHLNWCFLHYNYCEETSTIISIG 1064


>gb|AEX94829.1| RNA polymerase beta' subunit (chloroplast) [Beaucarnea hookeri]
          Length = 1385

 Score =  419 bits (1078), Expect = e-135
 Identities = 203/209 (97%), Positives = 205/209 (98%)
 Frame = +3

Query: 3    FVEVRANGLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV 182
            FVEVRAN LIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV
Sbjct: 860  FVEVRANDLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV 919

Query: 183  TQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLG 362
            T+HQGTIGTLLNRNKEGQSL ILSSFNCFRV PFNGSKYNNVAKESNPITPI+GLLGPLG
Sbjct: 920  TKHQGTIGTLLNRNKEGQSLRILSSFNCFRVVPFNGSKYNNVAKESNPITPIRGLLGPLG 979

Query: 363  TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN 542
            TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN
Sbjct: 980  TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN 1039

Query: 543  NIILNPSHLNWCFLHYNYCEETSTTISIG 629
            NIILNPSHLNWCFLHYNYCEETST ISIG
Sbjct: 1040 NIILNPSHLNWCFLHYNYCEETSTIISIG 1068


>ref|YP_009335323.1| RNA polymerase beta subunit (chloroplast) [Nolina atopocarpa]
 gb|AEZ49490.1| RNA polymerase beta'' subunit, partial (plastid) [Nolina atopocarpa]
 gb|APO12381.1| RNA polymerase beta subunit (chloroplast) [Nolina atopocarpa]
          Length = 1385

 Score =  419 bits (1076), Expect = e-134
 Identities = 203/209 (97%), Positives = 204/209 (97%)
 Frame = +3

Query: 3    FVEVRANGLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV 182
            FVEVRAN LIRDFIRIELVKSTISYTGKRYD AGSGLIPDNGLDRTNINPFYSKVKIPLV
Sbjct: 860  FVEVRANDLIRDFIRIELVKSTISYTGKRYDMAGSGLIPDNGLDRTNINPFYSKVKIPLV 919

Query: 183  TQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLG 362
            TQHQGTIGTLLNRNKEGQSL ILSSFNCFRV PFNGSKYNNVAKESNPITPI+GLLGPLG
Sbjct: 920  TQHQGTIGTLLNRNKEGQSLRILSSFNCFRVVPFNGSKYNNVAKESNPITPIRGLLGPLG 979

Query: 363  TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN 542
            TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN
Sbjct: 980  TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN 1039

Query: 543  NIILNPSHLNWCFLHYNYCEETSTTISIG 629
            NIILNPSHLNWCFLHYNYCEETST ISIG
Sbjct: 1040 NIILNPSHLNWCFLHYNYCEETSTIISIG 1068


>ref|YP_009431208.1| RNA polymerase beta' subunit (chloroplast) [Maianthemum bicolor]
 gb|ASW26644.1| RNA polymerase beta' subunit (chloroplast) [Maianthemum bicolor]
          Length = 1381

 Score =  417 bits (1072), Expect = e-134
 Identities = 203/209 (97%), Positives = 204/209 (97%)
 Frame = +3

Query: 3    FVEVRANGLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV 182
            FVEVRAN LIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV
Sbjct: 856  FVEVRANDLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV 915

Query: 183  TQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLG 362
            TQHQGTIGTLLNRNKEGQSL ILSSFNCFRVGPFNGSKYNNVAKESNPITPI+GLLGPLG
Sbjct: 916  TQHQGTIGTLLNRNKEGQSLRILSSFNCFRVGPFNGSKYNNVAKESNPITPIRGLLGPLG 975

Query: 363  TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN 542
            TIVPKIVNF SSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSP N
Sbjct: 976  TIVPKIVNFSSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPSN 1035

Query: 543  NIILNPSHLNWCFLHYNYCEETSTTISIG 629
            NIILNPSHLNWCFLHYNYCEETST ISIG
Sbjct: 1036 NIILNPSHLNWCFLHYNYCEETSTIISIG 1064


>gb|AEX94834.1| RNA polymerase beta' subunit (chloroplast) [Ruscus aculeatus]
          Length = 1387

 Score =  414 bits (1063), Expect = e-132
 Identities = 200/209 (95%), Positives = 201/209 (96%)
 Frame = +3

Query: 3    FVEVRANGLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV 182
            FVEVRAN LIRDFIRIELVKSTISYT KRYD  GSGLIPDNGLDRTNINPFYSKVKIPLV
Sbjct: 860  FVEVRANDLIRDFIRIELVKSTISYTEKRYDMTGSGLIPDNGLDRTNINPFYSKVKIPLV 919

Query: 183  TQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLG 362
            TQHQGTIGTLLNRNKEGQSL ILSSFNCFRVGPFNGSKYNNV KESNPITPI+GLLGPLG
Sbjct: 920  TQHQGTIGTLLNRNKEGQSLRILSSFNCFRVGPFNGSKYNNVTKESNPITPIRGLLGPLG 979

Query: 363  TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN 542
             IVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN
Sbjct: 980  IIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN 1039

Query: 543  NIILNPSHLNWCFLHYNYCEETSTTISIG 629
            NIILNPSHLNWCFLHYNYCEETST ISIG
Sbjct: 1040 NIILNPSHLNWCFLHYNYCEETSTIISIG 1068


>gb|ABD93833.1| RNA polymerase beta chain, partial (chloroplast) [Xanthorrhoea
           quadrangulata]
          Length = 811

 Score =  399 bits (1026), Expect = e-132
 Identities = 193/209 (92%), Positives = 197/209 (94%)
 Frame = +3

Query: 3   FVEVRANGLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV 182
           FVEVRAN LIRDFIRIELVKSTISYTGKRYDTAGSGLIP+NGLDRTNINPFYSK KIPL 
Sbjct: 359 FVEVRANDLIRDFIRIELVKSTISYTGKRYDTAGSGLIPENGLDRTNINPFYSKAKIPLF 418

Query: 183 TQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLG 362
           TQHQGTIGTLLNRNKE QSLIILSSFNC RVGPFNGSKYNNV KESNPITPI+ LLGPLG
Sbjct: 419 TQHQGTIGTLLNRNKECQSLIILSSFNCSRVGPFNGSKYNNVTKESNPITPIRDLLGPLG 478

Query: 363 TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN 542
           TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQ FQVLEV KYCLIDENRRIYNP PCN
Sbjct: 479 TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQIFQVLEVFKYCLIDENRRIYNPGPCN 538

Query: 543 NIILNPSHLNWCFLHYNYCEETSTTISIG 629
           NIILNP HLNWCFL++NYCEETST ISIG
Sbjct: 539 NIILNPLHLNWCFLYHNYCEETSTIISIG 567


>gb|AEX94835.1| RNA polymerase beta' subunit (chloroplast) [Sansevieria trifasciata]
          Length = 1384

 Score =  410 bits (1053), Expect = e-131
 Identities = 197/209 (94%), Positives = 201/209 (96%)
 Frame = +3

Query: 3    FVEVRANGLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV 182
            FVEVRAN LIRDFIRIELVKSTISYTGKRYDTAGSGLIPDN LDRTNINPFYSKVKIPLV
Sbjct: 857  FVEVRANDLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNRLDRTNINPFYSKVKIPLV 916

Query: 183  TQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLG 362
            TQHQGTIGTLLNRNKEGQSL ILSSFNCF VGPFNGSKYNNV KESNPITPI+GLLGPLG
Sbjct: 917  TQHQGTIGTLLNRNKEGQSLRILSSFNCFGVGPFNGSKYNNVVKESNPITPIRGLLGPLG 976

Query: 363  TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN 542
            TIVPKIVNFYSSYHLITHNQILLNKYWL DNFKQTFQVL+VLKYCLIDEN+RIYNPSPCN
Sbjct: 977  TIVPKIVNFYSSYHLITHNQILLNKYWLFDNFKQTFQVLQVLKYCLIDENKRIYNPSPCN 1036

Query: 543  NIILNPSHLNWCFLHYNYCEETSTTISIG 629
            NIILNPSHLNWCFLHYNYCE+T T ISIG
Sbjct: 1037 NIILNPSHLNWCFLHYNYCEKTPTIISIG 1065


>ref|YP_009327294.1| RNA polymerase beta'' subunit (chloroplast) [Agave americana]
 gb|AOV94028.1| RNA polymerase beta'' subunit (chloroplast) [Agave americana]
          Length = 1380

 Score =  409 bits (1052), Expect = e-131
 Identities = 198/209 (94%), Positives = 200/209 (95%)
 Frame = +3

Query: 3    FVEVRANGLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV 182
            FVEVRAN LIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSK KIPLV
Sbjct: 853  FVEVRANDLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKGKIPLV 912

Query: 183  TQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLG 362
            TQHQ T+GTLLNRNKE QSLIILSSFNCFRVGPFNGSKYNN AKESNPITPI+ LLGPLG
Sbjct: 913  TQHQETVGTLLNRNKECQSLIILSSFNCFRVGPFNGSKYNNAAKESNPITPIRDLLGPLG 972

Query: 363  TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN 542
            TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNP PCN
Sbjct: 973  TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPGPCN 1032

Query: 543  NIILNPSHLNWCFLHYNYCEETSTTISIG 629
            NIILNP HLNWCFLHYNYCEETST ISIG
Sbjct: 1033 NIILNPFHLNWCFLHYNYCEETSTIISIG 1061


>ref|YP_009334309.1| RNA polymerase beta subunit (chloroplast) [Agave attenuata]
 gb|APO11119.1| RNA polymerase beta subunit (chloroplast) [Agave attenuata]
          Length = 1384

 Score =  409 bits (1052), Expect = e-131
 Identities = 198/209 (94%), Positives = 200/209 (95%)
 Frame = +3

Query: 3    FVEVRANGLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV 182
            FVEVRAN LIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSK KIPLV
Sbjct: 857  FVEVRANDLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKGKIPLV 916

Query: 183  TQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLG 362
            TQHQ T+GTLLNRNKE QSLIILSSFNCFRVGPFNGSKYNN AKESNPITPI+ LLGPLG
Sbjct: 917  TQHQETVGTLLNRNKECQSLIILSSFNCFRVGPFNGSKYNNAAKESNPITPIRDLLGPLG 976

Query: 363  TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN 542
            TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNP PCN
Sbjct: 977  TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPGPCN 1036

Query: 543  NIILNPSHLNWCFLHYNYCEETSTTISIG 629
            NIILNP HLNWCFLHYNYCEETST ISIG
Sbjct: 1037 NIILNPFHLNWCFLHYNYCEETSTIISIG 1065


>ref|YP_009335237.1| RNA polymerase beta subunit (chloroplast) [Manfreda virginica]
 gb|AEX94805.1| RNA polymerase beta' subunit (chloroplast) [Manfreda virginica]
 gb|APO12295.1| RNA polymerase beta subunit (chloroplast) [Manfreda virginica]
          Length = 1384

 Score =  409 bits (1052), Expect = e-131
 Identities = 198/209 (94%), Positives = 200/209 (95%)
 Frame = +3

Query: 3    FVEVRANGLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV 182
            FVEVRAN LIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSK KIPLV
Sbjct: 857  FVEVRANDLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKGKIPLV 916

Query: 183  TQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLG 362
            TQHQ T+GTLLNRNKE QSLIILSSFNCFRVGPFNGSKYNN AKESNPITPI+ LLGPLG
Sbjct: 917  TQHQETVGTLLNRNKECQSLIILSSFNCFRVGPFNGSKYNNAAKESNPITPIRDLLGPLG 976

Query: 363  TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN 542
            TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNP PCN
Sbjct: 977  TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPGPCN 1036

Query: 543  NIILNPSHLNWCFLHYNYCEETSTTISIG 629
            NIILNP HLNWCFLHYNYCEETST ISIG
Sbjct: 1037 NIILNPFHLNWCFLHYNYCEETSTIISIG 1065


>ref|YP_009335578.1| RNA polymerase beta subunit (chloroplast) [Yucca brevifolia]
 ref|YP_009335748.1| RNA polymerase beta subunit (chloroplast) [Yucca queretaroensis]
 ref|YP_009335833.1| RNA polymerase beta subunit (chloroplast) [Yucca schidigera]
 gb|AAZ03984.1| RNA polymerase beta'' chain, partial (chloroplast) [Yucca schidigera]
 gb|APO12722.1| RNA polymerase beta subunit (chloroplast) [Yucca brevifolia]
 gb|APO12892.1| RNA polymerase beta subunit (chloroplast) [Yucca queretaroensis]
 gb|APO12977.1| RNA polymerase beta subunit (chloroplast) [Yucca schidigera]
          Length = 1384

 Score =  409 bits (1051), Expect = e-131
 Identities = 198/209 (94%), Positives = 200/209 (95%)
 Frame = +3

Query: 3    FVEVRANGLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV 182
            FVEVRAN LIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSK KIPLV
Sbjct: 857  FVEVRANDLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKGKIPLV 916

Query: 183  TQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLG 362
            TQHQ T+GTLLNRNKE QSLIILSSFNCFRVGPFNG KYNNVAKESNPITPI+ LLGPLG
Sbjct: 917  TQHQETVGTLLNRNKECQSLIILSSFNCFRVGPFNGPKYNNVAKESNPITPIRDLLGPLG 976

Query: 363  TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN 542
            TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNP PCN
Sbjct: 977  TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPGPCN 1036

Query: 543  NIILNPSHLNWCFLHYNYCEETSTTISIG 629
            NIILNP HLNWCFLHYNYCEETST ISIG
Sbjct: 1037 NIILNPFHLNWCFLHYNYCEETSTIISIG 1065


>ref|YP_009335154.1| RNA polymerase beta subunit (chloroplast) [Hosta ventricosa]
 gb|AEX94804.1| RNA polymerase beta' subunit (chloroplast) [Hosta ventricosa]
 gb|APO12212.1| RNA polymerase beta subunit (chloroplast) [Hosta ventricosa]
          Length = 1384

 Score =  407 bits (1047), Expect = e-130
 Identities = 198/209 (94%), Positives = 200/209 (95%)
 Frame = +3

Query: 3    FVEVRANGLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV 182
            FVEVRAN LIRDFIRIELVKSTISYT KRYDTAGSGLIPDNGLDRTNINPFYSK KIPLV
Sbjct: 857  FVEVRANDLIRDFIRIELVKSTISYTVKRYDTAGSGLIPDNGLDRTNINPFYSKGKIPLV 916

Query: 183  TQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLG 362
            TQHQ T+GTLLNRNKE QSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPI+ LLGPLG
Sbjct: 917  TQHQETVGTLLNRNKECQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIRDLLGPLG 976

Query: 363  TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN 542
            TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNP PCN
Sbjct: 977  TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPGPCN 1036

Query: 543  NIILNPSHLNWCFLHYNYCEETSTTISIG 629
            NIILNP HLNWCFLHYNYCEETST ISIG
Sbjct: 1037 NIILNPFHLNWCFLHYNYCEETSTIISIG 1065


>ref|YP_009334734.1| RNA polymerase beta subunit (chloroplast) [Chlorogalum pomeridianum]
 gb|APO11627.1| RNA polymerase beta subunit (chloroplast) [Chlorogalum pomeridianum]
          Length = 1356

 Score =  407 bits (1045), Expect = e-130
 Identities = 197/209 (94%), Positives = 200/209 (95%)
 Frame = +3

Query: 3    FVEVRANGLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKVKIPLV 182
            FVEVRAN LIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSK KIPLV
Sbjct: 855  FVEVRANDLIRDFIRIELVKSTISYTGKRYDTAGSGLIPDNGLDRTNINPFYSKGKIPLV 914

Query: 183  TQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGPLG 362
            TQHQ T+GTLLNRNKE QSL+ILSSFNCFRVGPFNGSKYNNVAKESNPITPI+ LLGPLG
Sbjct: 915  TQHQETVGTLLNRNKECQSLLILSSFNCFRVGPFNGSKYNNVAKESNPITPIRDLLGPLG 974

Query: 363  TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSPCN 542
            TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNP PCN
Sbjct: 975  TIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPRPCN 1034

Query: 543  NIILNPSHLNWCFLHYNYCEETSTTISIG 629
            NIILNP  LNWCFLHYNYCEETST ISIG
Sbjct: 1035 NIILNPFRLNWCFLHYNYCEETSTIISIG 1063