BLASTX nr result
ID: Ophiopogon25_contig00015504
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00015504
(504 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK67984.1| uncharacterized protein A4U43_C05F5910 [Asparagus... 92 9e-21
ref|XP_009384953.1| PREDICTED: mediator of RNA polymerase II tra... 96 8e-20
ref|XP_008782719.1| PREDICTED: mediator of RNA polymerase II tra... 95 2e-19
ref|XP_020265972.1| LOW QUALITY PROTEIN: mediator of RNA polymer... 92 1e-18
ref|XP_010921239.1| PREDICTED: mediator of RNA polymerase II tra... 91 3e-18
ref|XP_010921237.1| PREDICTED: mediator of RNA polymerase II tra... 91 3e-18
emb|CAN60712.1| hypothetical protein VITISV_036441 [Vitis vinifera] 91 5e-18
ref|XP_010653099.1| PREDICTED: mediator of RNA polymerase II tra... 91 5e-18
ref|XP_010653098.1| PREDICTED: mediator of RNA polymerase II tra... 91 5e-18
ref|XP_002264843.2| PREDICTED: mediator of RNA polymerase II tra... 91 5e-18
emb|CAQ58623.1| unknown gene [Vitis vinifera] 91 5e-18
ref|XP_020108026.1| mediator of RNA polymerase II transcription ... 90 1e-17
gb|OAY79976.1| Mediator of RNA polymerase II transcription subun... 90 1e-17
ref|XP_020108025.1| mediator of RNA polymerase II transcription ... 90 1e-17
emb|CBI31143.3| unnamed protein product, partial [Vitis vinifera] 90 1e-17
ref|XP_009420227.2| PREDICTED: mediator of RNA polymerase II tra... 90 1e-17
ref|XP_007206343.2| mediator of RNA polymerase II transcription ... 89 3e-17
ref|XP_017698950.1| PREDICTED: mediator of RNA polymerase II tra... 88 4e-17
ref|XP_017698949.1| PREDICTED: mediator of RNA polymerase II tra... 88 4e-17
ref|XP_020695037.1| mediator of RNA polymerase II transcription ... 86 2e-16
>gb|ONK67984.1| uncharacterized protein A4U43_C05F5910 [Asparagus officinalis]
Length = 146
Score = 92.4 bits (228), Expect = 9e-21
Identities = 44/69 (63%), Positives = 51/69 (73%)
Frame = +2
Query: 2 CDPAMWKSYVLCFLGLLVQLMPEWALKIRNETLEKLVDGLRRWDECELALQLLERRGPAA 181
CDPA WK+YV+C LGLLV+ +P W IR ETL KL +GL+ W E ELALQLLER GP A
Sbjct: 78 CDPATWKAYVMCLLGLLVEFVPGWVPGIRKETLWKLANGLKSWRESELALQLLERGGPEA 137
Query: 182 VTAAVEFVL 208
TA VE +L
Sbjct: 138 FTAVVESLL 146
>ref|XP_009384953.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Musa acuminata subsp. malaccensis]
Length = 1330
Score = 95.9 bits (237), Expect = 8e-20
Identities = 41/69 (59%), Positives = 53/69 (76%)
Frame = +2
Query: 2 CDPAMWKSYVLCFLGLLVQLMPEWALKIRNETLEKLVDGLRRWDECELALQLLERRGPAA 181
CDPA WK+YV CF+GLLV+ P W +++ ETL KL GLR W EC+LAL LLER GP++
Sbjct: 1262 CDPATWKAYVSCFVGLLVKFAPAWVHEVKQETLRKLASGLRGWHECDLALSLLERGGPSS 1321
Query: 182 VTAAVEFVL 208
+TA VE++L
Sbjct: 1322 MTAVVEYML 1330
>ref|XP_008782719.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Phoenix dactylifera]
Length = 1331
Score = 94.7 bits (234), Expect = 2e-19
Identities = 43/69 (62%), Positives = 51/69 (73%)
Frame = +2
Query: 2 CDPAMWKSYVLCFLGLLVQLMPEWALKIRNETLEKLVDGLRRWDECELALQLLERRGPAA 181
CDPAMWK+YV CF+GLLV +P W +++ TL KL GLR W EC+LAL LLER GPAA
Sbjct: 1263 CDPAMWKAYVSCFVGLLVSFVPTWVPEVKQLTLRKLASGLRGWHECDLALSLLERGGPAA 1322
Query: 182 VTAAVEFVL 208
+ A VE VL
Sbjct: 1323 MDAVVESVL 1331
>ref|XP_020265972.1| LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription
subunit 33A-like [Asparagus officinalis]
Length = 1070
Score = 92.4 bits (228), Expect = 1e-18
Identities = 44/69 (63%), Positives = 51/69 (73%)
Frame = +2
Query: 2 CDPAMWKSYVLCFLGLLVQLMPEWALKIRNETLEKLVDGLRRWDECELALQLLERRGPAA 181
CDPA WK+YV+C LGLLV+ +P W IR ETL KL +GL+ W E ELALQLLER GP A
Sbjct: 1002 CDPATWKAYVMCLLGLLVEFVPGWVPGIRKETLWKLANGLKSWRESELALQLLERGGPEA 1061
Query: 182 VTAAVEFVL 208
TA VE +L
Sbjct: 1062 FTAVVESLL 1070
>ref|XP_010921239.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X2 [Elaeis guineensis]
Length = 1331
Score = 91.3 bits (225), Expect = 3e-18
Identities = 42/69 (60%), Positives = 50/69 (72%)
Frame = +2
Query: 2 CDPAMWKSYVLCFLGLLVQLMPEWALKIRNETLEKLVDGLRRWDECELALQLLERRGPAA 181
CDPAMWK+YV CF+GLLV +P W +++ TL KL GLR W EC+LAL LLE GPAA
Sbjct: 1263 CDPAMWKAYVSCFVGLLVSFVPTWVPEVKQLTLCKLASGLRGWHECDLALSLLEHGGPAA 1322
Query: 182 VTAAVEFVL 208
+ A VE VL
Sbjct: 1323 MDAVVESVL 1331
>ref|XP_010921237.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Elaeis guineensis]
Length = 1352
Score = 91.3 bits (225), Expect = 3e-18
Identities = 42/69 (60%), Positives = 50/69 (72%)
Frame = +2
Query: 2 CDPAMWKSYVLCFLGLLVQLMPEWALKIRNETLEKLVDGLRRWDECELALQLLERRGPAA 181
CDPAMWK+YV CF+GLLV +P W +++ TL KL GLR W EC+LAL LLE GPAA
Sbjct: 1284 CDPAMWKAYVSCFVGLLVSFVPTWVPEVKQLTLCKLASGLRGWHECDLALSLLEHGGPAA 1343
Query: 182 VTAAVEFVL 208
+ A VE VL
Sbjct: 1344 MDAVVESVL 1352
>emb|CAN60712.1| hypothetical protein VITISV_036441 [Vitis vinifera]
Length = 1237
Score = 90.9 bits (224), Expect = 5e-18
Identities = 41/68 (60%), Positives = 48/68 (70%)
Frame = +2
Query: 2 CDPAMWKSYVLCFLGLLVQLMPEWALKIRNETLEKLVDGLRRWDECELALQLLERRGPAA 181
CDPA WKSYV C +GLLV L P W ++ ETL KL +GLR W ECELAL LLE+ GPA
Sbjct: 1166 CDPATWKSYVSCLVGLLVSLAPTWIRDVKRETLRKLANGLRGWHECELALSLLEKGGPAT 1225
Query: 182 VTAAVEFV 205
+ +A E V
Sbjct: 1226 LGSAAELV 1233
>ref|XP_010653099.1| PREDICTED: mediator of RNA polymerase II transcription subunit 33A
isoform X3 [Vitis vinifera]
Length = 1310
Score = 90.9 bits (224), Expect = 5e-18
Identities = 41/68 (60%), Positives = 48/68 (70%)
Frame = +2
Query: 2 CDPAMWKSYVLCFLGLLVQLMPEWALKIRNETLEKLVDGLRRWDECELALQLLERRGPAA 181
CDPA WKSYV C +GLLV L P W ++ ETL KL +GLR W ECELAL LLE+ GPA
Sbjct: 1239 CDPATWKSYVSCLVGLLVSLAPTWIRDVKRETLRKLANGLRGWHECELALSLLEKGGPAT 1298
Query: 182 VTAAVEFV 205
+ +A E V
Sbjct: 1299 LGSAAELV 1306
>ref|XP_010653098.1| PREDICTED: mediator of RNA polymerase II transcription subunit 33A
isoform X2 [Vitis vinifera]
Length = 1330
Score = 90.9 bits (224), Expect = 5e-18
Identities = 41/68 (60%), Positives = 48/68 (70%)
Frame = +2
Query: 2 CDPAMWKSYVLCFLGLLVQLMPEWALKIRNETLEKLVDGLRRWDECELALQLLERRGPAA 181
CDPA WKSYV C +GLLV L P W ++ ETL KL +GLR W ECELAL LLE+ GPA
Sbjct: 1259 CDPATWKSYVSCLVGLLVSLAPTWIRDVKRETLRKLANGLRGWHECELALSLLEKGGPAT 1318
Query: 182 VTAAVEFV 205
+ +A E V
Sbjct: 1319 LGSAAELV 1326
>ref|XP_002264843.2| PREDICTED: mediator of RNA polymerase II transcription subunit 33A
isoform X1 [Vitis vinifera]
Length = 1332
Score = 90.9 bits (224), Expect = 5e-18
Identities = 41/68 (60%), Positives = 48/68 (70%)
Frame = +2
Query: 2 CDPAMWKSYVLCFLGLLVQLMPEWALKIRNETLEKLVDGLRRWDECELALQLLERRGPAA 181
CDPA WKSYV C +GLLV L P W ++ ETL KL +GLR W ECELAL LLE+ GPA
Sbjct: 1261 CDPATWKSYVSCLVGLLVSLAPTWIRDVKRETLRKLANGLRGWHECELALSLLEKGGPAT 1320
Query: 182 VTAAVEFV 205
+ +A E V
Sbjct: 1321 LGSAAELV 1328
>emb|CAQ58623.1| unknown gene [Vitis vinifera]
Length = 1472
Score = 90.9 bits (224), Expect = 5e-18
Identities = 41/68 (60%), Positives = 48/68 (70%)
Frame = +2
Query: 2 CDPAMWKSYVLCFLGLLVQLMPEWALKIRNETLEKLVDGLRRWDECELALQLLERRGPAA 181
CDPA WKSYV C +GLLV L P W ++ ETL KL +GLR W ECELAL LLE+ GPA
Sbjct: 1401 CDPATWKSYVSCLVGLLVSLAPTWIRDVKRETLRKLANGLRGWHECELALSLLEKGGPAT 1460
Query: 182 VTAAVEFV 205
+ +A E V
Sbjct: 1461 LGSAAELV 1468
>ref|XP_020108026.1| mediator of RNA polymerase II transcription subunit 33A-like isoform
X2 [Ananas comosus]
Length = 1076
Score = 89.7 bits (221), Expect = 1e-17
Identities = 42/69 (60%), Positives = 51/69 (73%)
Frame = +2
Query: 2 CDPAMWKSYVLCFLGLLVQLMPEWALKIRNETLEKLVDGLRRWDECELALQLLERRGPAA 181
CDPA WK+YV CF+GLLV+ +P W ++ +TL+KL GLR W ECELAL LLER G AA
Sbjct: 1008 CDPATWKAYVSCFVGLLVKYVPLWVPDVKLDTLKKLASGLRGWHECELALSLLERGGTAA 1067
Query: 182 VTAAVEFVL 208
+ A VE VL
Sbjct: 1068 MGAVVESVL 1076
>gb|OAY79976.1| Mediator of RNA polymerase II transcription subunit 33A [Ananas
comosus]
Length = 1256
Score = 89.7 bits (221), Expect = 1e-17
Identities = 42/69 (60%), Positives = 51/69 (73%)
Frame = +2
Query: 2 CDPAMWKSYVLCFLGLLVQLMPEWALKIRNETLEKLVDGLRRWDECELALQLLERRGPAA 181
CDPA WK+YV CF+GLLV+ +P W ++ +TL+KL GLR W ECELAL LLER G AA
Sbjct: 1188 CDPATWKAYVSCFVGLLVKYVPLWVPDVKLDTLKKLASGLRGWHECELALSLLERGGTAA 1247
Query: 182 VTAAVEFVL 208
+ A VE VL
Sbjct: 1248 MGAVVESVL 1256
>ref|XP_020108025.1| mediator of RNA polymerase II transcription subunit 33A-like isoform
X1 [Ananas comosus]
Length = 1304
Score = 89.7 bits (221), Expect = 1e-17
Identities = 42/69 (60%), Positives = 51/69 (73%)
Frame = +2
Query: 2 CDPAMWKSYVLCFLGLLVQLMPEWALKIRNETLEKLVDGLRRWDECELALQLLERRGPAA 181
CDPA WK+YV CF+GLLV+ +P W ++ +TL+KL GLR W ECELAL LLER G AA
Sbjct: 1236 CDPATWKAYVSCFVGLLVKYVPLWVPDVKLDTLKKLASGLRGWHECELALSLLERGGTAA 1295
Query: 182 VTAAVEFVL 208
+ A VE VL
Sbjct: 1296 MGAVVESVL 1304
>emb|CBI31143.3| unnamed protein product, partial [Vitis vinifera]
Length = 1342
Score = 89.7 bits (221), Expect = 1e-17
Identities = 43/79 (54%), Positives = 51/79 (64%)
Frame = +2
Query: 2 CDPAMWKSYVLCFLGLLVQLMPEWALKIRNETLEKLVDGLRRWDECELALQLLERRGPAA 181
CDPA WKSYV C +GLLV L P W ++ ETL KL +GLR W ECELAL LLE+ GPA
Sbjct: 1270 CDPATWKSYVSCLVGLLVSLAPTWIRDVKRETLRKLANGLRGWHECELALSLLEKGGPAT 1329
Query: 182 VTAAVEFVLR*SSGCYDNM 238
+ +A E YDN+
Sbjct: 1330 LGSAAELK-------YDNL 1341
>ref|XP_009420227.2| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Musa acuminata subsp. malaccensis]
Length = 1362
Score = 89.7 bits (221), Expect = 1e-17
Identities = 41/69 (59%), Positives = 49/69 (71%)
Frame = +2
Query: 2 CDPAMWKSYVLCFLGLLVQLMPEWALKIRNETLEKLVDGLRRWDECELALQLLERRGPAA 181
CDPA+WK+YV CF+GLLV P W L+ + E L KL GLR W E ++AL LLE GP+A
Sbjct: 1294 CDPAIWKAYVSCFVGLLVNFAPAWVLEAKQEALHKLASGLRGWQEFDMALSLLELGGPSA 1353
Query: 182 VTAAVEFVL 208
VTA VE VL
Sbjct: 1354 VTAVVESVL 1362
>ref|XP_007206343.2| mediator of RNA polymerase II transcription subunit 33A [Prunus
persica]
gb|ONI04055.1| hypothetical protein PRUPE_6G299600 [Prunus persica]
gb|ONI04056.1| hypothetical protein PRUPE_6G299600 [Prunus persica]
Length = 1323
Score = 88.6 bits (218), Expect = 3e-17
Identities = 39/68 (57%), Positives = 48/68 (70%)
Frame = +2
Query: 2 CDPAMWKSYVLCFLGLLVQLMPEWALKIRNETLEKLVDGLRRWDECELALQLLERRGPAA 181
CDPA WK+YV C +GL+V P W +++ ETL KL GLR W ECELAL LLER GP+A
Sbjct: 1250 CDPATWKAYVSCLVGLMVNFAPVWIREVKVETLRKLASGLRGWHECELALSLLERGGPSA 1309
Query: 182 VTAAVEFV 205
+ +A E V
Sbjct: 1310 IGSAAELV 1317
>ref|XP_017698950.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X2 [Phoenix dactylifera]
Length = 762
Score = 88.2 bits (217), Expect = 4e-17
Identities = 41/69 (59%), Positives = 49/69 (71%)
Frame = +2
Query: 2 CDPAMWKSYVLCFLGLLVQLMPEWALKIRNETLEKLVDGLRRWDECELALQLLERRGPAA 181
CDPA WK+YV CF+GLLV +P W +++ TL KL GLR W E +LAL LLER GPAA
Sbjct: 694 CDPATWKAYVSCFVGLLVSFVPTWVPEVKQGTLHKLASGLRGWHEYDLALSLLERGGPAA 753
Query: 182 VTAAVEFVL 208
+ A VE VL
Sbjct: 754 MDALVESVL 762
>ref|XP_017698949.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Phoenix dactylifera]
Length = 818
Score = 88.2 bits (217), Expect = 4e-17
Identities = 41/69 (59%), Positives = 49/69 (71%)
Frame = +2
Query: 2 CDPAMWKSYVLCFLGLLVQLMPEWALKIRNETLEKLVDGLRRWDECELALQLLERRGPAA 181
CDPA WK+YV CF+GLLV +P W +++ TL KL GLR W E +LAL LLER GPAA
Sbjct: 750 CDPATWKAYVSCFVGLLVSFVPTWVPEVKQGTLHKLASGLRGWHEYDLALSLLERGGPAA 809
Query: 182 VTAAVEFVL 208
+ A VE VL
Sbjct: 810 MDALVESVL 818
>ref|XP_020695037.1| mediator of RNA polymerase II transcription subunit 33A-like isoform
X4 [Dendrobium catenatum]
Length = 1065
Score = 85.9 bits (211), Expect = 2e-16
Identities = 39/69 (56%), Positives = 49/69 (71%)
Frame = +2
Query: 2 CDPAMWKSYVLCFLGLLVQLMPEWALKIRNETLEKLVDGLRRWDECELALQLLERRGPAA 181
CDP W++YV C LGLLV+ +P W +IR TL KL GLRRW+E ELAL LLER GPA+
Sbjct: 997 CDPVTWRTYVSCLLGLLVRFVPSWIPEIRKGTLRKLAAGLRRWNEWELALALLERAGPAS 1056
Query: 182 VTAAVEFVL 208
+ +E +L
Sbjct: 1057 MELVMESIL 1065