BLASTX nr result

ID: Ophiopogon25_contig00015266 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00015266
         (379 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020251440.1| LOW QUALITY PROTEIN: DEAD-box ATP-dependent ...    84   4e-16
gb|ONK81188.1| uncharacterized protein A4U43_C01F26270 [Asparagu...    84   4e-16

>ref|XP_020251440.1| LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 31-like
           [Asparagus officinalis]
          Length = 646

 Score = 83.6 bits (205), Expect = 4e-16
 Identities = 56/129 (43%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
 Frame = +1

Query: 1   RKTRGSVSKRRFGSDLXXXXXXXXXXXXX-FLXXXXXXXXXXXXXXXXXXXNGESSYKQG 177
           RKTRGS  KRRF SDL              FL                   N ESSYKQG
Sbjct: 36  RKTRGSQPKRRFVSDLEDEDEEEEEEEKEQFLSGQSRGRGSSSSFSKRGGRNTESSYKQG 95

Query: 178 GRSLRVMSXXXXXXXXX--YGFGDDIFGDKVDKKVAGTKDPVLKSGSSAELGNEERAKPV 351
            +S+R MS           YG  DD FGDKVD K  G KD  LKS +SAELGN    K V
Sbjct: 96  RKSIRAMSEDEDDDDDDDVYGSDDDFFGDKVDGKKLGMKDSFLKSDTSAELGNANSEKQV 155

Query: 352 TKCSGADED 378
           ++ SG D+D
Sbjct: 156 SRSSGGDQD 164


>gb|ONK81188.1| uncharacterized protein A4U43_C01F26270 [Asparagus officinalis]
          Length = 1562

 Score = 83.6 bits (205), Expect = 4e-16
 Identities = 56/129 (43%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
 Frame = +1

Query: 1   RKTRGSVSKRRFGSDLXXXXXXXXXXXXX-FLXXXXXXXXXXXXXXXXXXXNGESSYKQG 177
           RKTRGS  KRRF SDL              FL                   N ESSYKQG
Sbjct: 536 RKTRGSQPKRRFVSDLEDEDEEEEEEEKEQFLSGQSRGRGSSSSFSKRGGRNTESSYKQG 595

Query: 178 GRSLRVMSXXXXXXXXX--YGFGDDIFGDKVDKKVAGTKDPVLKSGSSAELGNEERAKPV 351
            +S+R MS           YG  DD FGDKVD K  G KD  LKS +SAELGN    K V
Sbjct: 596 RKSIRAMSEDEDDDDDDDVYGSDDDFFGDKVDGKKLGMKDSFLKSDTSAELGNANSEKQV 655

Query: 352 TKCSGADED 378
           ++ SG D+D
Sbjct: 656 SRSSGGDQD 664


Top