BLASTX nr result
ID: Ophiopogon25_contig00015217
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00015217
(526 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020102269.1| 40S ribosomal protein SA-like [Ananas comosus] 74 1e-12
ref|XP_020104059.1| 40S ribosomal protein SA-like [Ananas comosus] 71 2e-11
gb|OAY66693.1| 40S ribosomal protein SA [Ananas comosus] 71 2e-11
ref|XP_010939863.2| PREDICTED: 40S ribosomal protein SA [Elaeis ... 70 5e-11
ref|XP_009388357.2| PREDICTED: 40S ribosomal protein SA-like, pa... 69 8e-11
ref|XP_020100442.1| 40S ribosomal protein Sa-2-like isoform X2 [... 69 2e-10
gb|ONL93376.1| 40S ribosomal protein Sa-1 [Zea mays] 65 4e-10
gb|ACG32965.1| 40S ribosomal protein SA [Zea mays] 65 3e-09
gb|ACG32855.1| 40S ribosomal protein SA [Zea mays] 65 3e-09
ref|NP_001141088.1| uncharacterized protein LOC100273170 [Zea ma... 65 3e-09
gb|ONL93374.1| 40S ribosomal protein Sa-1 [Zea mays] >gi|1142624... 65 4e-09
gb|PAN51243.1| hypothetical protein PAHAL_E00121 [Panicum hallii] 64 8e-09
ref|XP_020100441.1| 40S ribosomal protein Sa-2-like isoform X1 [... 64 1e-08
ref|XP_009414830.1| PREDICTED: 40S ribosomal protein SA-like [Mu... 62 5e-08
ref|NP_001141003.1| acidic ribosomal protein P40 [Zea mays] >gi|... 62 5e-08
gb|AQL09469.1| acidic ribosomal protein P40 [Zea mays] 59 7e-08
gb|ONL94283.1| 40S ribosomal protein Sa-1 [Zea mays] 59 4e-07
ref|XP_008651621.2| 40S ribosomal protein SA [Zea mays] 59 4e-07
gb|ONL94285.1| 40S ribosomal protein Sa-1 [Zea mays] 59 5e-07
ref|XP_008660474.1| 40S ribosomal protein SA [Zea mays] >gi|1142... 59 6e-07
>ref|XP_020102269.1| 40S ribosomal protein SA-like [Ananas comosus]
Length = 307
Score = 74.3 bits (181), Expect = 1e-12
Identities = 34/58 (58%), Positives = 43/58 (74%)
Frame = -3
Query: 521 APVSSISSTDWAAAQAPVSGEGWDSVAAPPAEGLAAPVVDAPSGWDAAAPVPSATGWE 348
A + ++ + DWA AQAPV+G+GWD AAPP +G A PVV PSGW+ AA P+ATGWE
Sbjct: 254 AAIPAVPAVDWATAQAPVAGDGWDVAAAPPVDGAAPPVV--PSGWEPAA--PAATGWE 307
>ref|XP_020104059.1| 40S ribosomal protein SA-like [Ananas comosus]
Length = 306
Score = 71.2 bits (173), Expect = 2e-11
Identities = 35/59 (59%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Frame = -3
Query: 521 APVSSISSTDWAAAQAPVSGEGWDSVAAP-PAEGLAAPVVDAPSGWDAAAPVPSATGWE 348
A V ++S +W AAQAPV+G+GWD+ AAP P G+AAPV AP GW+AA P+ATGWE
Sbjct: 252 ATVPAVSGVEWTAAQAPVAGDGWDAAAAPAPVNGIAAPV--APVGWEAAQ--PAATGWE 306
>gb|OAY66693.1| 40S ribosomal protein SA [Ananas comosus]
Length = 306
Score = 71.2 bits (173), Expect = 2e-11
Identities = 35/59 (59%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Frame = -3
Query: 521 APVSSISSTDWAAAQAPVSGEGWDSVAAP-PAEGLAAPVVDAPSGWDAAAPVPSATGWE 348
A V ++S +W AAQAPV+G+GWD+ AAP P G+AAPV AP GW+AA P+ATGWE
Sbjct: 252 ATVPAVSGVEWTAAQAPVAGDGWDAAAAPAPVNGIAAPV--APVGWEAAQ--PAATGWE 306
>ref|XP_010939863.2| PREDICTED: 40S ribosomal protein SA [Elaeis guineensis]
Length = 304
Score = 70.1 bits (170), Expect = 5e-11
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = -3
Query: 521 APVSSISSTDWAAAQAPVSGEGWDSVAAPPAEGLAAPVVDAPSGWDAAAPVPSATGWE 348
A V +++ +W AAQAPV+G+GW++ AAPP EG P V PSGW++AAP PS GW+
Sbjct: 251 AVVPAVAGVEWTAAQAPVAGDGWEASAAPPVEGAVPPAV--PSGWESAAPAPS--GWD 304
>ref|XP_009388357.2| PREDICTED: 40S ribosomal protein SA-like, partial [Musa acuminata
subsp. malaccensis]
Length = 298
Score = 69.3 bits (168), Expect = 8e-11
Identities = 31/59 (52%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Frame = -3
Query: 521 APVSSISSTDWAAAQAPVSGEGWDSVAAPPAEGLAAPVVDAPSGWDAAAP-VPSATGWE 348
A V ++ +W QAPV+ EGWD+ AAPP EG+ +P V PSGW+AAAP P+ +GWE
Sbjct: 242 AGVPPVAGVEWTTGQAPVAAEGWDAAAAPPVEGVVSPGV--PSGWEAAAPAAPAPSGWE 298
>ref|XP_020100442.1| 40S ribosomal protein Sa-2-like isoform X2 [Ananas comosus]
gb|OAY81597.1| 40S ribosomal protein SA [Ananas comosus]
Length = 306
Score = 68.6 bits (166), Expect = 2e-10
Identities = 33/57 (57%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Frame = -3
Query: 515 VSSISSTDWAAAQAPVSGEGWDSVAAPPA-EGLAAPVVDAPSGWDAAAPVPSATGWE 348
V ++ +WAAAQAPV+G+GWD+ AAP A +G+ AP+V PSGW+AA P P TGWE
Sbjct: 254 VPPVAGVEWAAAQAPVAGDGWDTSAAPVATDGVVAPIV--PSGWEAAPPAP--TGWE 306
>gb|ONL93376.1| 40S ribosomal protein Sa-1 [Zea mays]
Length = 150
Score = 65.1 bits (157), Expect = 4e-10
Identities = 35/60 (58%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Frame = -3
Query: 521 APVSSISSTDWAAAQAPV-SGEGWDSVAAP-PAEGLAAPVVDAPSGWDAAAPVPSATGWE 348
AP + + DW AA APV +GEGWD AP PA+G PVV AP+GWD AAP P+A GWE
Sbjct: 93 APPVAPTGADWGAAPAPVPTGEGWDQAGAPVPADGTVPPVV-APTGWDQAAP-PTAQGWE 150
>gb|ACG32965.1| 40S ribosomal protein SA [Zea mays]
Length = 308
Score = 65.1 bits (157), Expect = 3e-09
Identities = 35/60 (58%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Frame = -3
Query: 521 APVSSISSTDWAAAQAPV-SGEGWDSVAAP-PAEGLAAPVVDAPSGWDAAAPVPSATGWE 348
AP + + DW AA APV +GEGWD AP PA+G PVV AP+GWD AAP P+A GWE
Sbjct: 251 APPVAPTGADWGAAPAPVPTGEGWDQAGAPVPADGTVPPVV-APTGWDQAAP-PTAQGWE 308
>gb|ACG32855.1| 40S ribosomal protein SA [Zea mays]
Length = 308
Score = 65.1 bits (157), Expect = 3e-09
Identities = 35/60 (58%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Frame = -3
Query: 521 APVSSISSTDWAAAQAPV-SGEGWDSVAAP-PAEGLAAPVVDAPSGWDAAAPVPSATGWE 348
AP + + DW AA APV +GEGWD AP PA+G PVV AP+GWD AAP P+A GWE
Sbjct: 251 APPVAPTGADWGAAPAPVPTGEGWDQAGAPVPADGTVPPVV-APTGWDQAAP-PTAQGWE 308
>ref|NP_001141088.1| uncharacterized protein LOC100273170 [Zea mays]
gb|ACF85375.1| unknown [Zea mays]
Length = 308
Score = 65.1 bits (157), Expect = 3e-09
Identities = 35/60 (58%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Frame = -3
Query: 521 APVSSISSTDWAAAQAPV-SGEGWDSVAAP-PAEGLAAPVVDAPSGWDAAAPVPSATGWE 348
AP + + DW AA APV +GEGWD AP PA+G PVV AP+GWD AAP P+A GWE
Sbjct: 251 APPVAPTGADWGAAPAPVPTGEGWDQAGAPVPADGTVPPVV-APTGWDQAAP-PTAQGWE 308
>gb|ONL93374.1| 40S ribosomal protein Sa-1 [Zea mays]
gb|ONL93375.1| 40S ribosomal protein Sa-1 [Zea mays]
Length = 378
Score = 65.1 bits (157), Expect = 4e-09
Identities = 35/60 (58%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Frame = -3
Query: 521 APVSSISSTDWAAAQAPV-SGEGWDSVAAP-PAEGLAAPVVDAPSGWDAAAPVPSATGWE 348
AP + + DW AA APV +GEGWD AP PA+G PVV AP+GWD AAP P+A GWE
Sbjct: 321 APPVAPTGADWGAAPAPVPTGEGWDQAGAPVPADGTVPPVV-APTGWDQAAP-PTAQGWE 378
>gb|PAN51243.1| hypothetical protein PAHAL_E00121 [Panicum hallii]
Length = 311
Score = 63.9 bits (154), Expect = 8e-09
Identities = 35/62 (56%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
Frame = -3
Query: 521 APVSSISST--DWAAAQAPV-SGEGWDSVAAP-PAEGLAAPVVDAPSGWDAAAPVPSATG 354
AP ++S T +W AA APV +GEGWD AP P EG PVV AP+GWD AA P+A G
Sbjct: 251 APPVAVSGTGAEWGAAAAPVPTGEGWDPAGAPAPVEGAVPPVVAAPAGWDPAAQ-PTAQG 309
Query: 353 WE 348
WE
Sbjct: 310 WE 311
>ref|XP_020100441.1| 40S ribosomal protein Sa-2-like isoform X1 [Ananas comosus]
Length = 308
Score = 63.5 bits (153), Expect = 1e-08
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 3/59 (5%)
Frame = -3
Query: 515 VSSISSTDWAAAQ--APVSGEGWDSVAAPPA-EGLAAPVVDAPSGWDAAAPVPSATGWE 348
V ++ +WAAAQ APV+G+GWD+ AAP A +G+ AP+V PSGW+AA P P TGWE
Sbjct: 254 VPPVAGVEWAAAQVTAPVAGDGWDTSAAPVATDGVVAPIV--PSGWEAAPPAP--TGWE 308
>ref|XP_009414830.1| PREDICTED: 40S ribosomal protein SA-like [Musa acuminata subsp.
malaccensis]
Length = 305
Score = 61.6 bits (148), Expect = 5e-08
Identities = 29/58 (50%), Positives = 36/58 (62%)
Frame = -3
Query: 521 APVSSISSTDWAAAQAPVSGEGWDSVAAPPAEGLAAPVVDAPSGWDAAAPVPSATGWE 348
A V + +W AAQAP++ GWD AAPPA+G AP PSGW+ A P S +GWE
Sbjct: 251 AVVPLVPGVEWTAAQAPIAAGGWDVAAAPPADGAVAP---PPSGWETAPPAAS-SGWE 304
>ref|NP_001141003.1| acidic ribosomal protein P40 [Zea mays]
gb|ACF85147.1| unknown [Zea mays]
gb|AQL09467.1| acidic ribosomal protein P40 [Zea mays]
Length = 310
Score = 61.6 bits (148), Expect = 5e-08
Identities = 31/61 (50%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Frame = -3
Query: 521 APVSSISSTDWAAAQAPV-SGEGWDSVAAPP--AEGLAAPVVDAPSGWDAAAPVPSATGW 351
AP + + DW AA APV +G+GWD AP +G P+V AP+GWD AAP P+A GW
Sbjct: 251 APPVAPTGADWGAAPAPVPTGDGWDQAGAPAPVVDGTVPPLV-APTGWDQAAPPPTAQGW 309
Query: 350 E 348
E
Sbjct: 310 E 310
>gb|AQL09469.1| acidic ribosomal protein P40 [Zea mays]
Length = 161
Score = 59.3 bits (142), Expect = 7e-08
Identities = 29/52 (55%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Frame = -3
Query: 494 DWAAAQAPV-SGEGWDSVAAPP--AEGLAAPVVDAPSGWDAAAPVPSATGWE 348
DW AA APV +G+GWD AP +G P+V AP+GWD AAP P+A GWE
Sbjct: 111 DWGAAPAPVPTGDGWDQAGAPAPVVDGTVPPLV-APTGWDQAAPPPTAQGWE 161
>gb|ONL94283.1| 40S ribosomal protein Sa-1 [Zea mays]
Length = 264
Score = 58.9 bits (141), Expect = 4e-07
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Frame = -3
Query: 521 APVSSISSTDWAAAQAPV-SGEGWDSVAAP-PAEGLAAPVVDAPSGWDAAAPVPSATGWE 348
AP + + +W AA APV +G+GWD AP PA+G PV+ AP+GWD AA P+A GWE
Sbjct: 207 APSVAPTGAEWGAAPAPVPTGDGWDQTGAPVPADGAVPPVI-APTGWDQAAQ-PTAQGWE 264
>ref|XP_008651621.2| 40S ribosomal protein SA [Zea mays]
Length = 288
Score = 58.9 bits (141), Expect = 4e-07
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Frame = -3
Query: 521 APVSSISSTDWAAAQAPV-SGEGWDSVAAP-PAEGLAAPVVDAPSGWDAAAPVPSATGWE 348
AP + + +W AA APV +G+GWD AP PA+G PV+ AP+GWD AA P+A GWE
Sbjct: 231 APSVAPTGAEWGAAPAPVPTGDGWDQTGAPVPADGAVPPVI-APTGWDQAAQ-PTAQGWE 288
>gb|ONL94285.1| 40S ribosomal protein Sa-1 [Zea mays]
Length = 310
Score = 58.9 bits (141), Expect = 5e-07
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Frame = -3
Query: 521 APVSSISSTDWAAAQAPV-SGEGWDSVAAP-PAEGLAAPVVDAPSGWDAAAPVPSATGWE 348
AP + + +W AA APV +G+GWD AP PA+G PV+ AP+GWD AA P+A GWE
Sbjct: 253 APSVAPTGAEWGAAPAPVPTGDGWDQTGAPVPADGAVPPVI-APTGWDQAAQ-PTAQGWE 310
>ref|XP_008660474.1| 40S ribosomal protein SA [Zea mays]
gb|AQL09207.1| 40S ribosomal protein Sa-1 [Zea mays]
Length = 308
Score = 58.5 bits (140), Expect = 6e-07
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Frame = -3
Query: 521 APVSSISSTDWAAAQAPV-SGEGWDSVAAP-PAEGLAAPVVDAPSGWDAAAPVPSATGWE 348
AP + + DW AA APV +G+GWD AP P +G PVV AP+GW++AA P+A GWE
Sbjct: 251 APPVAPTGADWGAAPAPVPTGDGWDQTVAPVPVDGTVPPVV-APTGWESAAQ-PTAQGWE 308