BLASTX nr result
ID: Ophiopogon25_contig00015176
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00015176
(415 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020250698.1| pre-mRNA cleavage factor Im 25 kDa subunit 1... 151 2e-56
ref|XP_010925042.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD... 139 7e-52
ref|XP_009392936.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD... 145 1e-51
ref|XP_021650177.1| pre-mRNA cleavage factor Im 25 kDa subunit 1... 142 3e-51
gb|POF26955.1| pre-mrna cleavage factor im 25 kda subunit 1 [Que... 142 5e-51
ref|XP_023905572.1| pre-mRNA cleavage factor Im 25 kDa subunit 1... 142 5e-51
ref|XP_006451545.1| pre-mRNA cleavage factor Im 25 kDa subunit 1... 140 5e-51
ref|XP_012076986.1| pre-mRNA cleavage factor Im 25 kDa subunit 1... 145 9e-51
gb|KDP33872.1| hypothetical protein JCGZ_07443 [Jatropha curcas] 145 9e-51
dbj|GAV72979.1| NUDIX_2 domain-containing protein [Cephalotus fo... 141 2e-50
ref|XP_020220928.1| pre-mRNA cleavage factor Im 25 kDa subunit 1... 136 2e-50
gb|KYP62233.1| Cleavage and polyadenylation specificity factor s... 136 2e-50
ref|XP_015889257.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD... 145 3e-50
gb|OAO97209.1| CFIM-25 [Arabidopsis thaliana] 135 3e-50
ref|NP_567835.1| homolog of CFIM-25 [Arabidopsis thaliana] >gi|7... 135 3e-50
gb|EOY30353.1| CFIM-25 isoform 1 [Theobroma cacao] 141 3e-50
gb|OAY78491.1| Pre-mRNA cleavage factor Im 25 kDa subunit 1 [Ana... 140 5e-50
ref|XP_022730162.1| pre-mRNA cleavage factor Im 25 kDa subunit 1... 140 8e-50
ref|XP_010447806.1| PREDICTED: pre-mRNA cleavage factor Im 25 kD... 134 1e-49
ref|XP_020872508.1| pre-mRNA cleavage factor Im 25 kDa subunit 1... 137 1e-49
>ref|XP_020250698.1| pre-mRNA cleavage factor Im 25 kDa subunit 1 [Asparagus
officinalis]
gb|ONK54898.1| uncharacterized protein A4U43_UnF9920 [Asparagus officinalis]
Length = 190
Score = 151 bits (381), Expect(2) = 2e-56
Identities = 69/84 (82%), Positives = 76/84 (90%)
Frame = -3
Query: 254 VGDCIGMWWKSDFETLPYPYMPRRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQLHD 75
VG+CIGMWW+SDFETLPYPYMPR+ KECTKLFLV LPM QFVVPRNMKLLAVP+ QLHD
Sbjct: 105 VGECIGMWWRSDFETLPYPYMPRKPKECTKLFLVSLPMAWQFVVPRNMKLLAVPIRQLHD 164
Query: 74 NNKTYGPIISGIPQLLSKYSFSII 3
N KTYGPIISGIPQLLSK++ I+
Sbjct: 165 NCKTYGPIISGIPQLLSKFTIKIM 188
Score = 96.3 bits (238), Expect(2) = 2e-56
Identities = 45/54 (83%), Positives = 49/54 (90%)
Frame = -1
Query: 415 YAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGLKXR 254
Y AHGLRTCV+GVLLVEL++QPHVLLLQVRNS FSLPGGRLRPGE DT GLK +
Sbjct: 35 YGAHGLRTCVRGVLLVELYQQPHVLLLQVRNSTFSLPGGRLRPGESDTAGLKRK 88
>ref|XP_010925042.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 isoform X2
[Elaeis guineensis]
Length = 211
Score = 139 bits (350), Expect(2) = 7e-52
Identities = 63/90 (70%), Positives = 76/90 (84%), Gaps = 3/90 (3%)
Frame = -3
Query: 263 ETXVGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVP 93
E V +CIG+WW+S+FETLP+PY+P R KEC KLFLVRLP +QFVVP+N+KLLAVP
Sbjct: 120 EWQVDECIGIWWRSEFETLPFPYLPPNTHRPKECAKLFLVRLPRNRQFVVPKNLKLLAVP 179
Query: 92 LCQLHDNNKTYGPIISGIPQLLSKYSFSII 3
LCQ+HDN+KTYGPIISGIP LLSK+ F+ I
Sbjct: 180 LCQIHDNSKTYGPIISGIPHLLSKFYFNTI 209
Score = 92.8 bits (229), Expect(2) = 7e-52
Identities = 43/54 (79%), Positives = 48/54 (88%)
Frame = -1
Query: 415 YAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGLKXR 254
YAAHGLRTCV+GVLLVELF+ PHVLLLQV+NS F LPGGRLRPGE D +GLK +
Sbjct: 52 YAAHGLRTCVEGVLLVELFQHPHVLLLQVKNSFFKLPGGRLRPGESDIEGLKRK 105
>ref|XP_009392936.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 isoform X2
[Musa acuminata subsp. malaccensis]
Length = 215
Score = 145 bits (365), Expect(2) = 1e-51
Identities = 66/87 (75%), Positives = 79/87 (90%), Gaps = 3/87 (3%)
Frame = -3
Query: 254 VGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQ 84
+ + IGMWW+SDFETL +PY+P RR KECTKLFLV+LPMT+ F+VPRN+KLLAVPLCQ
Sbjct: 127 IDELIGMWWRSDFETLRFPYLPPNLRRPKECTKLFLVKLPMTRHFIVPRNLKLLAVPLCQ 186
Query: 83 LHDNNKTYGPIISGIPQLLSKYSFSII 3
LHDN++TYGPIISGIPQLLSK+SF+II
Sbjct: 187 LHDNSETYGPIISGIPQLLSKFSFNII 213
Score = 86.3 bits (212), Expect(2) = 1e-51
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = -1
Query: 415 YAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGLKXR 254
YAA G+RTCV G+LLVELF+ PHVLLLQVRNS F LPGGRLR GE D +GLK +
Sbjct: 56 YAARGMRTCVHGILLVELFQHPHVLLLQVRNSFFKLPGGRLRSGESDVEGLKRK 109
>ref|XP_021650177.1| pre-mRNA cleavage factor Im 25 kDa subunit 1-like [Hevea
brasiliensis]
ref|XP_021650178.1| pre-mRNA cleavage factor Im 25 kDa subunit 1-like [Hevea
brasiliensis]
Length = 212
Score = 142 bits (358), Expect(2) = 3e-51
Identities = 63/87 (72%), Positives = 79/87 (90%), Gaps = 3/87 (3%)
Frame = -3
Query: 254 VGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQ 84
VG+C+GMWW+ DFETL YPYMP + KECTKL+LVRLP++++F+VP+N+KLLAVPLCQ
Sbjct: 124 VGECLGMWWRPDFETLLYPYMPPDGKSPKECTKLYLVRLPVSRKFIVPKNLKLLAVPLCQ 183
Query: 83 LHDNNKTYGPIISGIPQLLSKYSFSII 3
+H+N KTYGPIISGIPQLLSK+SF+II
Sbjct: 184 IHENYKTYGPIISGIPQLLSKFSFNII 210
Score = 87.4 bits (215), Expect(2) = 3e-51
Identities = 38/54 (70%), Positives = 47/54 (87%)
Frame = -1
Query: 415 YAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGLKXR 254
Y AHGLRTCV+ V+LVELF+ PH+LLLQ++NS+F LPGGRLRPGE D +GLK +
Sbjct: 55 YQAHGLRTCVEAVILVELFKHPHLLLLQIKNSIFKLPGGRLRPGESDIEGLKRK 108
>gb|POF26955.1| pre-mrna cleavage factor im 25 kda subunit 1 [Quercus suber]
Length = 250
Score = 142 bits (359), Expect(2) = 5e-51
Identities = 63/87 (72%), Positives = 79/87 (90%), Gaps = 3/87 (3%)
Frame = -3
Query: 254 VGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQ 84
VG+C+GMWWK DFETL YPY+P + KECTKLFLVRLP +++F+VP+N+KLLAVPLCQ
Sbjct: 162 VGECLGMWWKPDFETLVYPYLPPNVKCPKECTKLFLVRLPESRKFIVPKNLKLLAVPLCQ 221
Query: 83 LHDNNKTYGPIISGIPQLLSKYSFSII 3
+H+N+KTYGPIISG+PQLLSK+SF+II
Sbjct: 222 IHENHKTYGPIISGVPQLLSKFSFNII 248
Score = 86.3 bits (212), Expect(2) = 5e-51
Identities = 40/54 (74%), Positives = 46/54 (85%)
Frame = -1
Query: 415 YAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGLKXR 254
YAAHGLRTCVQ V+LVELF+ PH+LLLQVRNS+F LPGGRLR GE D GL+ +
Sbjct: 91 YAAHGLRTCVQAVILVELFKHPHLLLLQVRNSIFKLPGGRLRLGESDIDGLRRK 144
>ref|XP_023905572.1| pre-mRNA cleavage factor Im 25 kDa subunit 1 [Quercus suber]
Length = 220
Score = 142 bits (359), Expect(2) = 5e-51
Identities = 63/87 (72%), Positives = 79/87 (90%), Gaps = 3/87 (3%)
Frame = -3
Query: 254 VGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQ 84
VG+C+GMWWK DFETL YPY+P + KECTKLFLVRLP +++F+VP+N+KLLAVPLCQ
Sbjct: 132 VGECLGMWWKPDFETLVYPYLPPNVKCPKECTKLFLVRLPESRKFIVPKNLKLLAVPLCQ 191
Query: 83 LHDNNKTYGPIISGIPQLLSKYSFSII 3
+H+N+KTYGPIISG+PQLLSK+SF+II
Sbjct: 192 IHENHKTYGPIISGVPQLLSKFSFNII 218
Score = 86.3 bits (212), Expect(2) = 5e-51
Identities = 40/54 (74%), Positives = 46/54 (85%)
Frame = -1
Query: 415 YAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGLKXR 254
YAAHGLRTCVQ V+LVELF+ PH+LLLQVRNS+F LPGGRLR GE D GL+ +
Sbjct: 61 YAAHGLRTCVQAVILVELFKHPHLLLLQVRNSIFKLPGGRLRLGESDIDGLRRK 114
>ref|XP_006451545.1| pre-mRNA cleavage factor Im 25 kDa subunit 1 isoform X1 [Citrus
clementina]
ref|XP_006475514.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 isoform X1
[Citrus sinensis]
ref|XP_015384947.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 isoform X2
[Citrus sinensis]
ref|XP_024048028.1| pre-mRNA cleavage factor Im 25 kDa subunit 1 isoform X1 [Citrus
clementina]
gb|ESR64785.1| hypothetical protein CICLE_v10009459mg [Citrus clementina]
gb|KDO55414.1| hypothetical protein CISIN_1g028063mg [Citrus sinensis]
dbj|GAY57278.1| hypothetical protein CUMW_178200 [Citrus unshiu]
Length = 214
Score = 140 bits (354), Expect(2) = 5e-51
Identities = 62/91 (68%), Positives = 80/91 (87%), Gaps = 3/91 (3%)
Frame = -3
Query: 266 IETXVGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAV 96
++ VG+C+GMWWK DFETL +PY P +R KECTKLFLV+LP++Q+F VP+N+KLLAV
Sbjct: 122 VDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAV 181
Query: 95 PLCQLHDNNKTYGPIISGIPQLLSKYSFSII 3
PLCQ+H+N+KTYG IISG+PQLLSK+SF+II
Sbjct: 182 PLCQIHENHKTYGQIISGVPQLLSKFSFNII 212
Score = 88.2 bits (217), Expect(2) = 5e-51
Identities = 41/54 (75%), Positives = 46/54 (85%)
Frame = -1
Query: 415 YAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGLKXR 254
Y AHGLRTCV+ VLLVELF+ PH+LLLQVRNS+F LPGGRLRPGE D GLK +
Sbjct: 55 YDAHGLRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRK 108
>ref|XP_012076986.1| pre-mRNA cleavage factor Im 25 kDa subunit 1 [Jatropha curcas]
Length = 212
Score = 145 bits (365), Expect(2) = 9e-51
Identities = 64/87 (73%), Positives = 79/87 (90%), Gaps = 3/87 (3%)
Frame = -3
Query: 254 VGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQ 84
V +C+GMWWK DFETLPYPYMP + KECTKLFLVRLPM+++F+VP+N+KLLA+PLCQ
Sbjct: 124 VDECLGMWWKPDFETLPYPYMPPNVKTPKECTKLFLVRLPMSRKFIVPKNLKLLAIPLCQ 183
Query: 83 LHDNNKTYGPIISGIPQLLSKYSFSII 3
+H+N+KTYG IISGIPQLLSK+SF+II
Sbjct: 184 IHENHKTYGSIISGIPQLLSKFSFNII 210
Score = 83.2 bits (204), Expect(2) = 9e-51
Identities = 38/54 (70%), Positives = 45/54 (83%)
Frame = -1
Query: 415 YAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGLKXR 254
Y AHGLRT V+ V+LVELF+ PH+LLLQ+RNS+F LPGGRLRPGE D GLK +
Sbjct: 55 YLAHGLRTYVEAVILVELFKHPHLLLLQIRNSIFRLPGGRLRPGESDIDGLKRK 108
>gb|KDP33872.1| hypothetical protein JCGZ_07443 [Jatropha curcas]
Length = 208
Score = 145 bits (365), Expect(2) = 9e-51
Identities = 64/87 (73%), Positives = 79/87 (90%), Gaps = 3/87 (3%)
Frame = -3
Query: 254 VGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQ 84
V +C+GMWWK DFETLPYPYMP + KECTKLFLVRLPM+++F+VP+N+KLLA+PLCQ
Sbjct: 120 VDECLGMWWKPDFETLPYPYMPPNVKTPKECTKLFLVRLPMSRKFIVPKNLKLLAIPLCQ 179
Query: 83 LHDNNKTYGPIISGIPQLLSKYSFSII 3
+H+N+KTYG IISGIPQLLSK+SF+II
Sbjct: 180 IHENHKTYGSIISGIPQLLSKFSFNII 206
Score = 83.2 bits (204), Expect(2) = 9e-51
Identities = 38/54 (70%), Positives = 45/54 (83%)
Frame = -1
Query: 415 YAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGLKXR 254
Y AHGLRT V+ V+LVELF+ PH+LLLQ+RNS+F LPGGRLRPGE D GLK +
Sbjct: 51 YLAHGLRTYVEAVILVELFKHPHLLLLQIRNSIFRLPGGRLRPGESDIDGLKRK 104
>dbj|GAV72979.1| NUDIX_2 domain-containing protein [Cephalotus follicularis]
Length = 221
Score = 141 bits (356), Expect(2) = 2e-50
Identities = 59/87 (67%), Positives = 80/87 (91%), Gaps = 3/87 (3%)
Frame = -3
Query: 254 VGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQ 84
VG+C+GMWWK DFE+L YPY+P +R KECTK+FLVRLP++++F+VP+N+KLL VPLC+
Sbjct: 133 VGECLGMWWKPDFESLVYPYLPPNVKRPKECTKIFLVRLPVSRKFIVPKNLKLLVVPLCE 192
Query: 83 LHDNNKTYGPIISGIPQLLSKYSFSII 3
+H+N+KTYGPIISG+PQLLSK+SF+I+
Sbjct: 193 IHENHKTYGPIISGVPQLLSKFSFNIV 219
Score = 85.9 bits (211), Expect(2) = 2e-50
Identities = 40/54 (74%), Positives = 46/54 (85%)
Frame = -1
Query: 415 YAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGLKXR 254
YAAHGLRT V+ V+LVELF+ PH+LLLQVRNS+F LPGGRLRPGE D GLK +
Sbjct: 62 YAAHGLRTYVEAVILVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDRDGLKRK 115
>ref|XP_020220928.1| pre-mRNA cleavage factor Im 25 kDa subunit 1 [Cajanus cajan]
Length = 213
Score = 136 bits (342), Expect(2) = 2e-50
Identities = 58/91 (63%), Positives = 81/91 (89%), Gaps = 3/91 (3%)
Frame = -3
Query: 266 IETXVGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAV 96
+E VG+C+GMWW+ DFETL YP++P ++ KECTK+FLV+LP +++F+VP+NM+LLAV
Sbjct: 121 LEWEVGECLGMWWRPDFETLLYPFLPPNVKQPKECTKVFLVKLPASRKFIVPKNMRLLAV 180
Query: 95 PLCQLHDNNKTYGPIISGIPQLLSKYSFSII 3
PLCQ+H+N+KTYG IISG+PQLLSK+SF++I
Sbjct: 181 PLCQVHENHKTYGQIISGVPQLLSKFSFNMI 211
Score = 90.9 bits (224), Expect(2) = 2e-50
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = -1
Query: 415 YAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGLKXR 254
YAA G+RTCVQ VLLVELF+ PH+LLLQVRNS++SLPGGRLRPGE DT GLK +
Sbjct: 54 YAARGMRTCVQAVLLVELFKHPHLLLLQVRNSIYSLPGGRLRPGESDTDGLKRK 107
>gb|KYP62233.1| Cleavage and polyadenylation specificity factor subunit 5, partial
[Cajanus cajan]
Length = 161
Score = 136 bits (342), Expect(2) = 2e-50
Identities = 58/91 (63%), Positives = 81/91 (89%), Gaps = 3/91 (3%)
Frame = -3
Query: 266 IETXVGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAV 96
+E VG+C+GMWW+ DFETL YP++P ++ KECTK+FLV+LP +++F+VP+NM+LLAV
Sbjct: 69 LEWEVGECLGMWWRPDFETLLYPFLPPNVKQPKECTKVFLVKLPASRKFIVPKNMRLLAV 128
Query: 95 PLCQLHDNNKTYGPIISGIPQLLSKYSFSII 3
PLCQ+H+N+KTYG IISG+PQLLSK+SF++I
Sbjct: 129 PLCQVHENHKTYGQIISGVPQLLSKFSFNMI 159
Score = 90.9 bits (224), Expect(2) = 2e-50
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = -1
Query: 415 YAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGLKXR 254
YAA G+RTCVQ VLLVELF+ PH+LLLQVRNS++SLPGGRLRPGE DT GLK +
Sbjct: 2 YAARGMRTCVQAVLLVELFKHPHLLLLQVRNSIYSLPGGRLRPGESDTDGLKRK 55
>ref|XP_015889257.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 [Ziziphus
jujuba]
ref|XP_015889258.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1 [Ziziphus
jujuba]
Length = 225
Score = 145 bits (366), Expect(2) = 3e-50
Identities = 63/91 (69%), Positives = 83/91 (91%), Gaps = 3/91 (3%)
Frame = -3
Query: 266 IETXVGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAV 96
I+ VG+C+GMWW+ DFETL YPY+P +R KECTKLFLV+LP++++F+VP+N+KLLAV
Sbjct: 133 IDWEVGECLGMWWRPDFETLLYPYLPPNVKRPKECTKLFLVKLPVSRKFIVPKNLKLLAV 192
Query: 95 PLCQLHDNNKTYGPIISGIPQLLSKYSFSII 3
PLCQ+H+N+KTYGPIISG+PQLLSK+SF+II
Sbjct: 193 PLCQIHENHKTYGPIISGVPQLLSKFSFNII 223
Score = 81.3 bits (199), Expect(2) = 3e-50
Identities = 37/54 (68%), Positives = 45/54 (83%)
Frame = -1
Query: 415 YAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGLKXR 254
YAAHGLRT V+ V++VELF+ PH+LLLQV+NS F LPGGRLRPGE D GL+ +
Sbjct: 66 YAAHGLRTSVEAVIVVELFKHPHLLLLQVKNSFFKLPGGRLRPGESDIDGLRRK 119
>gb|OAO97209.1| CFIM-25 [Arabidopsis thaliana]
Length = 223
Score = 135 bits (340), Expect(2) = 3e-50
Identities = 61/87 (70%), Positives = 76/87 (87%), Gaps = 3/87 (3%)
Frame = -3
Query: 254 VGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQ 84
VG+CIGMWW+ +FETL YP++P + KECTKLFLVRLP+ QQFVVP+N KLLAVPLCQ
Sbjct: 135 VGECIGMWWRPNFETLMYPFLPPNIKHPKECTKLFLVRLPVHQQFVVPKNFKLLAVPLCQ 194
Query: 83 LHDNNKTYGPIISGIPQLLSKYSFSII 3
LH+N KTYGPI+S IP+LLSK+SF+++
Sbjct: 195 LHENEKTYGPIMSQIPKLLSKFSFNMM 221
Score = 90.9 bits (224), Expect(2) = 3e-50
Identities = 42/54 (77%), Positives = 47/54 (87%)
Frame = -1
Query: 415 YAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGLKXR 254
YAAHGLRTCV+ VLLVELF+ PHVLLLQ RNS+F LPGGRLRPGE D +GLK +
Sbjct: 64 YAAHGLRTCVEAVLLVELFKHPHVLLLQYRNSIFKLPGGRLRPGESDIEGLKRK 117
>ref|NP_567835.1| homolog of CFIM-25 [Arabidopsis thaliana]
sp|Q94AF0.1|CFIS1_ARATH RecName: Full=Pre-mRNA cleavage factor Im 25 kDa subunit 1;
AltName: Full=Cleavage and polyadenylation specificity
factor 25 kDa subunit; Short=AtCFI-25; Short=CFIm-25;
Short=CPSF 25 kDa subunit; AltName: Full=Cleavage and
polyadenylation specificity factor subunit 25
gb|AAK82492.1| AT4g29820/F27B13_60 [Arabidopsis thaliana]
gb|AAM10303.1| AT4g29820/F27B13_60 [Arabidopsis thaliana]
gb|AAM63194.1| mRNA cleavage factor subunit-like protein [Arabidopsis thaliana]
gb|AEE85682.1| homolog of CFIM-25 [Arabidopsis thaliana]
Length = 222
Score = 135 bits (340), Expect(2) = 3e-50
Identities = 61/87 (70%), Positives = 76/87 (87%), Gaps = 3/87 (3%)
Frame = -3
Query: 254 VGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQ 84
VG+CIGMWW+ +FETL YP++P + KECTKLFLVRLP+ QQFVVP+N KLLAVPLCQ
Sbjct: 134 VGECIGMWWRPNFETLMYPFLPPNIKHPKECTKLFLVRLPVHQQFVVPKNFKLLAVPLCQ 193
Query: 83 LHDNNKTYGPIISGIPQLLSKYSFSII 3
LH+N KTYGPI+S IP+LLSK+SF+++
Sbjct: 194 LHENEKTYGPIMSQIPKLLSKFSFNMM 220
Score = 90.9 bits (224), Expect(2) = 3e-50
Identities = 42/54 (77%), Positives = 47/54 (87%)
Frame = -1
Query: 415 YAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGLKXR 254
YAAHGLRTCV+ VLLVELF+ PHVLLLQ RNS+F LPGGRLRPGE D +GLK +
Sbjct: 63 YAAHGLRTCVEAVLLVELFKHPHVLLLQYRNSIFKLPGGRLRPGESDIEGLKRK 116
>gb|EOY30353.1| CFIM-25 isoform 1 [Theobroma cacao]
Length = 219
Score = 141 bits (355), Expect(2) = 3e-50
Identities = 62/90 (68%), Positives = 80/90 (88%), Gaps = 3/90 (3%)
Frame = -3
Query: 263 ETXVGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVP 93
E VG+C+GMWW+ DFETL YPY+P ++ KECTKLFLVRLP +++F+VP+N+KLLAVP
Sbjct: 128 EWEVGECLGMWWRHDFETLLYPYLPPNVKKPKECTKLFLVRLPESRKFIVPKNLKLLAVP 187
Query: 92 LCQLHDNNKTYGPIISGIPQLLSKYSFSII 3
LCQ+H+N+KTYGPIISG+PQLLSK+S +II
Sbjct: 188 LCQVHENHKTYGPIISGVPQLLSKFSINII 217
Score = 85.1 bits (209), Expect(2) = 3e-50
Identities = 39/54 (72%), Positives = 46/54 (85%)
Frame = -1
Query: 415 YAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGLKXR 254
YAAHGLRT V+ V+LVELF+ PH+LLLQVRNS+F LPGGRLRPGE D GL+ +
Sbjct: 60 YAAHGLRTSVEAVILVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIDGLRRK 113
>gb|OAY78491.1| Pre-mRNA cleavage factor Im 25 kDa subunit 1 [Ananas comosus]
Length = 210
Score = 140 bits (352), Expect(2) = 5e-50
Identities = 62/87 (71%), Positives = 79/87 (90%), Gaps = 3/87 (3%)
Frame = -3
Query: 254 VGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQ 84
+G+C+GMWW+S+FETLP+PY P RR KECTK+FLVRLP+++QFVVPR++KLLAVPL Q
Sbjct: 121 IGECVGMWWRSEFETLPFPYPPPNSRRPKECTKVFLVRLPVSRQFVVPRHLKLLAVPLYQ 180
Query: 83 LHDNNKTYGPIISGIPQLLSKYSFSII 3
+HDN++ YGPIISGIP LLSK+SF+II
Sbjct: 181 IHDNSEVYGPIISGIPHLLSKFSFNII 207
Score = 85.9 bits (211), Expect(2) = 5e-50
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = -1
Query: 415 YAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGLKXR 254
+A+HGLRTCV GVLLVELF PHVL+LQV+NS F LPGGRLRPGE D GLK +
Sbjct: 50 FASHGLRTCVLGVLLVELFRHPHVLVLQVKNSFFKLPGGRLRPGEQDVDGLKRK 103
>ref|XP_022730162.1| pre-mRNA cleavage factor Im 25 kDa subunit 1-like isoform X2 [Durio
zibethinus]
Length = 221
Score = 140 bits (352), Expect(2) = 8e-50
Identities = 61/90 (67%), Positives = 80/90 (88%), Gaps = 3/90 (3%)
Frame = -3
Query: 263 ETXVGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVP 93
E VG+C+GMWW+ DFETL YPY+P ++ KECTKLFLVRLP +++F+VP+N+KLLAVP
Sbjct: 130 EWEVGECLGMWWRHDFETLLYPYLPPDVKKPKECTKLFLVRLPESRKFIVPKNLKLLAVP 189
Query: 92 LCQLHDNNKTYGPIISGIPQLLSKYSFSII 3
LC++H+N+KTYGPIISG+PQLLSK+S +II
Sbjct: 190 LCEVHENHKTYGPIISGVPQLLSKFSINII 219
Score = 85.1 bits (209), Expect(2) = 8e-50
Identities = 39/54 (72%), Positives = 47/54 (87%)
Frame = -1
Query: 415 YAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGLKXR 254
YAA+GLRT V+ V+LVELF+ PH+LLLQVRNS+F LPGGRLRPGE DT GL+ +
Sbjct: 62 YAAYGLRTSVEAVILVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDTDGLRRK 115
>ref|XP_010447806.1| PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 1-like
[Camelina sativa]
Length = 224
Score = 134 bits (336), Expect(2) = 1e-49
Identities = 60/87 (68%), Positives = 76/87 (87%), Gaps = 3/87 (3%)
Frame = -3
Query: 254 VGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQ 84
VG+CIGMWW+ +FETL YP++P + KEC+KLFLVRLP+ QQFVVP+N KLLAVPLCQ
Sbjct: 136 VGECIGMWWRPNFETLMYPFLPPNVKHPKECSKLFLVRLPVHQQFVVPKNFKLLAVPLCQ 195
Query: 83 LHDNNKTYGPIISGIPQLLSKYSFSII 3
LH+N KTYGPIIS IP+LLSK+S++++
Sbjct: 196 LHENEKTYGPIISQIPKLLSKFSYNMM 222
Score = 90.9 bits (224), Expect(2) = 1e-49
Identities = 42/54 (77%), Positives = 47/54 (87%)
Frame = -1
Query: 415 YAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGLKXR 254
YAAHGLRTCV+ VLLVELF+ PHVLLLQ RNS+F LPGGRLRPGE D +GLK +
Sbjct: 65 YAAHGLRTCVEAVLLVELFKHPHVLLLQYRNSIFKLPGGRLRPGESDIQGLKRK 118
>ref|XP_020872508.1| pre-mRNA cleavage factor Im 25 kDa subunit 1 [Arabidopsis lyrata
subsp. lyrata]
gb|EFH43645.1| hypothetical protein ARALYDRAFT_491776 [Arabidopsis lyrata subsp.
lyrata]
Length = 223
Score = 137 bits (345), Expect(2) = 1e-49
Identities = 62/87 (71%), Positives = 76/87 (87%), Gaps = 3/87 (3%)
Frame = -3
Query: 254 VGDCIGMWWKSDFETLPYPYMP---RRSKECTKLFLVRLPMTQQFVVPRNMKLLAVPLCQ 84
VG+CIGMWW+ +FETL YP++P + KECTKLFLVRLP+ QQFVVP+N KLLAVPLCQ
Sbjct: 135 VGECIGMWWRPNFETLMYPFLPPNVKHPKECTKLFLVRLPVNQQFVVPKNFKLLAVPLCQ 194
Query: 83 LHDNNKTYGPIISGIPQLLSKYSFSII 3
LH+N KTYGPIIS IP+LLSK+SF+++
Sbjct: 195 LHENEKTYGPIISQIPKLLSKFSFNMM 221
Score = 87.4 bits (215), Expect(2) = 1e-49
Identities = 40/54 (74%), Positives = 46/54 (85%)
Frame = -1
Query: 415 YAAHGLRTCVQGVLLVELFEQPHVLLLQVRNSVFSLPGGRLRPGEIDTKGLKXR 254
YAAHGLRTCV+ VLLVEL + PHVLLLQ RNS+F LPGGRLRPGE D +G+K +
Sbjct: 64 YAAHGLRTCVEAVLLVELLKHPHVLLLQYRNSIFKLPGGRLRPGESDIEGVKRK 117