BLASTX nr result
ID: Ophiopogon25_contig00015126
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00015126
(445 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EDL07831.1| RAB1, member RAS oncogene family, isoform CRA_c [... 188 1e-59
gb|EGW01236.1| Ras-like GTP-binding protein YPT1 [Cricetulus gri... 187 3e-59
gb|EAW99919.1| RAB1A, member RAS oncogene family, isoform CRA_c ... 188 3e-59
ref|XP_015758912.1| PREDICTED: ras-like GTP-binding protein YPT1... 187 6e-59
gb|ABS83488.1| RAB1, partial [Haliotis cracherodii] 188 7e-59
ref|XP_003227775.1| PREDICTED: ras-related protein ORAB-1 [Anoli... 187 1e-58
ref|XP_010808430.1| PREDICTED: ras-related protein Rab-1A isofor... 188 1e-58
ref|XP_014676662.1| PREDICTED: ras-related protein Rab-1A [Priap... 189 1e-58
gb|KJH49951.1| Ras family protein [Dictyocaulus viviparus] 187 2e-58
gb|ACU18790.1| unknown [Glycine max] 186 2e-58
pdb|4JVS|B Chain B, Crystal Structure Of Lepb Gap Domain From Le... 188 2e-58
gb|PKI38113.1| hypothetical protein CRG98_041478 [Punica granatum] 187 2e-58
ref|XP_013392768.1| ras-related protein ORAB-1 [Lingula anatina] 189 2e-58
emb|CAC21570.1| putative small GTP-binding protein (rab1b) [Homo... 187 2e-58
ref|XP_017745515.1| PREDICTED: ras-related protein Rab-1A [Rhino... 188 2e-58
gb|PAV80364.1| hypothetical protein WR25_20647 [Diploscapter pac... 187 2e-58
gb|ACD11937.1| hypothetical protein, partial [Isometrus maculatus] 188 2e-58
ref|XP_008797229.1| PREDICTED: ras-related protein RIC1-like [Ph... 187 2e-58
gb|KCW77838.1| hypothetical protein EUGRSUZ_D02119 [Eucalyptus g... 187 3e-58
pdb|3TKL|A Chain A, Crystal Structure Of The Gtp-Bound Rab1a In ... 188 3e-58
>gb|EDL07831.1| RAB1, member RAS oncogene family, isoform CRA_c [Mus musculus]
gb|EDL97933.1| rCG23301, isoform CRA_a [Rattus norvegicus]
Length = 99
Score = 188 bits (478), Expect = 1e-59
Identities = 91/95 (95%), Positives = 94/95 (98%)
Frame = -3
Query: 287 TNMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVEQDGKTIK 108
++MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRT+E DGKTIK
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 107 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 3
LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 96
>gb|EGW01236.1| Ras-like GTP-binding protein YPT1 [Cricetulus griseus]
Length = 96
Score = 187 bits (476), Expect = 3e-59
Identities = 91/93 (97%), Positives = 92/93 (98%)
Frame = -3
Query: 281 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVEQDGKTIKLQ 102
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 101 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 3
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 93
>gb|EAW99919.1| RAB1A, member RAS oncogene family, isoform CRA_c [Homo sapiens]
Length = 122
Score = 188 bits (478), Expect = 3e-59
Identities = 91/95 (95%), Positives = 94/95 (98%)
Frame = -3
Query: 287 TNMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVEQDGKTIK 108
++MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRT+E DGKTIK
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 107 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 3
LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 96
>ref|XP_015758912.1| PREDICTED: ras-like GTP-binding protein YPT1 isoform X1 [Acropora
digitifera]
Length = 124
Score = 187 bits (476), Expect = 6e-59
Identities = 91/93 (97%), Positives = 92/93 (98%)
Frame = -3
Query: 281 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVEQDGKTIKLQ 102
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 101 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 3
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 93
>gb|ABS83488.1| RAB1, partial [Haliotis cracherodii]
Length = 140
Score = 188 bits (477), Expect = 7e-59
Identities = 91/95 (95%), Positives = 93/95 (97%)
Frame = -3
Query: 287 TNMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVEQDGKTIK 108
+ MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRT+E DGKTIK
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 107 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 3
LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 96
>ref|XP_003227775.1| PREDICTED: ras-related protein ORAB-1 [Anolis carolinensis]
Length = 138
Score = 187 bits (476), Expect = 1e-58
Identities = 91/93 (97%), Positives = 92/93 (98%)
Frame = -3
Query: 281 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVEQDGKTIKLQ 102
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 101 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 3
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 93
>ref|XP_010808430.1| PREDICTED: ras-related protein Rab-1A isoform X2 [Bos taurus]
gb|ABX10871.1| RAB1A-like protein [Capra hircus]
Length = 161
Score = 188 bits (478), Expect = 1e-58
Identities = 91/95 (95%), Positives = 94/95 (98%)
Frame = -3
Query: 287 TNMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVEQDGKTIK 108
++MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRT+E DGKTIK
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 107 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 3
LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 96
>ref|XP_014676662.1| PREDICTED: ras-related protein Rab-1A [Priapulus caudatus]
Length = 205
Score = 189 bits (481), Expect = 1e-58
Identities = 92/95 (96%), Positives = 93/95 (97%)
Frame = -3
Query: 287 TNMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVEQDGKTIK 108
T MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRT+E DGKTIK
Sbjct: 2 TTMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 107 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 3
LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 96
>gb|KJH49951.1| Ras family protein [Dictyocaulus viviparus]
Length = 142
Score = 187 bits (475), Expect = 2e-58
Identities = 90/93 (96%), Positives = 92/93 (98%)
Frame = -3
Query: 281 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVEQDGKTIKLQ 102
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 63
Query: 101 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 3
IWDTAGQERFRTITSSYYRGAHGIIVVYD+TDQ
Sbjct: 64 IWDTAGQERFRTITSSYYRGAHGIIVVYDITDQ 96
>gb|ACU18790.1| unknown [Glycine max]
Length = 101
Score = 186 bits (471), Expect = 2e-58
Identities = 90/93 (96%), Positives = 92/93 (98%)
Frame = -3
Query: 281 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVEQDGKTIKLQ 102
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 101 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 3
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 93
>pdb|4JVS|B Chain B, Crystal Structure Of Lepb Gap Domain From Legionella
Drancourtii In Complex With Rab1-gdp And Alf3
Length = 181
Score = 188 bits (478), Expect = 2e-58
Identities = 91/95 (95%), Positives = 94/95 (98%)
Frame = -3
Query: 287 TNMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVEQDGKTIK 108
++MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRT+E DGKTIK
Sbjct: 6 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 65
Query: 107 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 3
LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ
Sbjct: 66 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 100
>gb|PKI38113.1| hypothetical protein CRG98_041478 [Punica granatum]
Length = 141
Score = 187 bits (474), Expect = 2e-58
Identities = 91/93 (97%), Positives = 92/93 (98%)
Frame = -3
Query: 281 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVEQDGKTIKLQ 102
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 101 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 3
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 93
>ref|XP_013392768.1| ras-related protein ORAB-1 [Lingula anatina]
Length = 207
Score = 189 bits (480), Expect = 2e-58
Identities = 91/95 (95%), Positives = 93/95 (97%)
Frame = -3
Query: 287 TNMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVEQDGKTIK 108
T MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRT+E DGKTIK
Sbjct: 2 TTMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 107 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 3
LQIWDTAGQERFRTITSSYYRGAHGII+VYDVTDQ
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQ 96
>emb|CAC21570.1| putative small GTP-binding protein (rab1b) [Homo sapiens]
Length = 163
Score = 187 bits (476), Expect = 2e-58
Identities = 91/93 (97%), Positives = 92/93 (98%)
Frame = -3
Query: 281 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVEQDGKTIKLQ 102
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 101 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 3
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 93
>ref|XP_017745515.1| PREDICTED: ras-related protein Rab-1A [Rhinopithecus bieti]
Length = 185
Score = 188 bits (478), Expect = 2e-58
Identities = 91/95 (95%), Positives = 94/95 (98%)
Frame = -3
Query: 287 TNMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVEQDGKTIK 108
++MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRT+E DGKTIK
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 107 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 3
LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 96
>gb|PAV80364.1| hypothetical protein WR25_20647 [Diploscapter pachys]
Length = 153
Score = 187 bits (475), Expect = 2e-58
Identities = 90/93 (96%), Positives = 92/93 (98%)
Frame = -3
Query: 281 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVEQDGKTIKLQ 102
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 63
Query: 101 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 3
IWDTAGQERFRTITSSYYRGAHGIIVVYD+TDQ
Sbjct: 64 IWDTAGQERFRTITSSYYRGAHGIIVVYDITDQ 96
>gb|ACD11937.1| hypothetical protein, partial [Isometrus maculatus]
Length = 177
Score = 188 bits (477), Expect = 2e-58
Identities = 91/95 (95%), Positives = 93/95 (97%)
Frame = -3
Query: 287 TNMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVEQDGKTIK 108
+ MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRT+E DGKTIK
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 107 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 3
LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 96
>ref|XP_008797229.1| PREDICTED: ras-related protein RIC1-like [Phoenix dactylifera]
Length = 146
Score = 187 bits (474), Expect = 2e-58
Identities = 91/93 (97%), Positives = 92/93 (98%)
Frame = -3
Query: 281 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVEQDGKTIKLQ 102
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 101 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 3
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 93
>gb|KCW77838.1| hypothetical protein EUGRSUZ_D02119 [Eucalyptus grandis]
gb|KCW77839.1| hypothetical protein EUGRSUZ_D02119 [Eucalyptus grandis]
Length = 149
Score = 187 bits (474), Expect = 3e-58
Identities = 91/93 (97%), Positives = 92/93 (98%)
Frame = -3
Query: 281 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVEQDGKTIKLQ 102
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 101 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 3
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 93
>pdb|3TKL|A Chain A, Crystal Structure Of The Gtp-Bound Rab1a In Complex With
The Coiled- Coil Domain Of Lida From Legionella
Pneumophila
Length = 196
Score = 188 bits (478), Expect = 3e-58
Identities = 91/95 (95%), Positives = 94/95 (98%)
Frame = -3
Query: 287 TNMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVEQDGKTIK 108
++MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRT+E DGKTIK
Sbjct: 7 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 66
Query: 107 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 3
LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ
Sbjct: 67 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ 101