BLASTX nr result

ID: Ophiopogon25_contig00014453 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00014453
         (491 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020251632.1| ribosomal RNA small subunit methyltransferas...    73   3e-12
ref|XP_009380338.1| PREDICTED: ribosomal RNA small subunit methy...    68   2e-10
ref|XP_010262358.1| PREDICTED: ribosomal RNA small subunit methy...    58   8e-07
ref|XP_010936775.1| PREDICTED: ribosomal RNA small subunit methy...    57   1e-06
gb|PIA63440.1| hypothetical protein AQUCO_00201051v1, partial [A...    57   1e-06
ref|XP_010936774.1| PREDICTED: ribosomal RNA small subunit methy...    57   2e-06
ref|XP_008782418.1| PREDICTED: ribosomal RNA small subunit methy...    55   7e-06

>ref|XP_020251632.1| ribosomal RNA small subunit methyltransferase nep-1 [Asparagus
           officinalis]
 ref|XP_020251633.1| ribosomal RNA small subunit methyltransferase nep-1 [Asparagus
           officinalis]
 ref|XP_020251634.1| ribosomal RNA small subunit methyltransferase nep-1 [Asparagus
           officinalis]
 ref|XP_020251635.1| ribosomal RNA small subunit methyltransferase nep-1 [Asparagus
           officinalis]
 gb|ONK81337.1| uncharacterized protein A4U43_C01F27950 [Asparagus officinalis]
          Length = 293

 Score = 72.8 bits (177), Expect = 3e-12
 Identities = 43/77 (55%), Positives = 52/77 (67%), Gaps = 6/77 (7%)
 Frame = -2

Query: 223 MVRPYAVRGRKK---RARVEEEPQQLEA---EVGDEVFAEENEQIAVEGGENPEESTVED 62
           MVRPYAV+GRKK   R RVEEE ++ E    E  DE  +E+  +  +E  E   EST ED
Sbjct: 1   MVRPYAVKGRKKPKKRPRVEEEEEEKEEQQQEENDEAVSEKENEETLEN-EEKGESTAED 59

Query: 61  EKKAEEAIDRMPGIPIA 11
           E+KAEEAI+ MPGIPIA
Sbjct: 60  ERKAEEAIEEMPGIPIA 76


>ref|XP_009380338.1| PREDICTED: ribosomal RNA small subunit methyltransferase nep-1
           [Musa acuminata subsp. malaccensis]
          Length = 288

 Score = 68.2 bits (165), Expect = 2e-10
 Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
 Frame = -2

Query: 223 MVRPYAVRGRKKRARVEEEPQQLEAEVGDEVFAEENEQIAVEG--GENPEESTVEDEKKA 50
           MVRPY V+GRK + R  EEP  +E E  +EV ++E E + VE   G   E +  EDEK+A
Sbjct: 1   MVRPYGVKGRKLKKRKVEEPAPVEEEE-EEVLSDEGEGVGVEEETGNGGEIAETEDEKRA 59

Query: 49  EEAIDRMPGIPIAGGI 2
           EEA++ MPGIPI   +
Sbjct: 60  EEAVNEMPGIPITAPV 75


>ref|XP_010262358.1| PREDICTED: ribosomal RNA small subunit methyltransferase nep-1
           [Nelumbo nucifera]
          Length = 296

 Score = 57.8 bits (138), Expect = 8e-07
 Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 10/81 (12%)
 Frame = -2

Query: 223 MVRPYAVRG--RKKRAR--------VEEEPQQLEAEVGDEVFAEENEQIAVEGGENPEES 74
           MVRPYAV+G  RKK+A         +EE+ +++  +   +   EE E+   E  E  EE 
Sbjct: 1   MVRPYAVKGIKRKKKAERYDIDEGEIEEQQEEMTTKRARQEEEEEEEEEEEEEEEEEEEK 60

Query: 73  TVEDEKKAEEAIDRMPGIPIA 11
             E+EKKAEEAI  +PGIP+A
Sbjct: 61  EEEEEKKAEEAIVVLPGIPVA 81


>ref|XP_010936775.1| PREDICTED: ribosomal RNA small subunit methyltransferase NEP1
           isoform X2 [Elaeis guineensis]
          Length = 250

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 33/72 (45%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
 Frame = -2

Query: 223 MVRPYAVRGRK-KRARVEEEPQQLEAEVGDEVFAEENEQIAVE-GGENPEESTVEDEKKA 50
           MVRPYAV+GRK K+ ++E+  ++ + EV +   AEE E +  E  G   E +  EDE++A
Sbjct: 1   MVRPYAVKGRKHKKRKIEKVVEEQKDEVLE---AEEEEGVKEEEAGSGGEAAEAEDERRA 57

Query: 49  EEAIDRMPGIPI 14
           EEA+++M GIPI
Sbjct: 58  EEAVEQMAGIPI 69


>gb|PIA63440.1| hypothetical protein AQUCO_00201051v1, partial [Aquilegia coerulea]
          Length = 326

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
 Frame = -2

Query: 232 EREMVRPYAVRGRKKRAR-----VEEEPQQLEAEVGDEVFAEENEQIAVEGGENPEESTV 68
           EREMVRP+AV+GRK++ R     VE++ +  E EV +E   EE EQ   +  +  E    
Sbjct: 34  EREMVRPFAVKGRKRKKRDDSYIVEKKIKDEEEEVVEE--EEEEEQTTPKKHKGEE---- 87

Query: 67  EDEKKAEEAIDRMPGIPI 14
           EDE+ AEEA++ +PGIPI
Sbjct: 88  EDERIAEEAVNELPGIPI 105


>ref|XP_010936774.1| PREDICTED: ribosomal RNA small subunit methyltransferase nep-1
           isoform X1 [Elaeis guineensis]
          Length = 287

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/72 (45%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
 Frame = -2

Query: 223 MVRPYAVRGRK-KRARVEEEPQQLEAEVGDEVFAEENEQIAVE-GGENPEESTVEDEKKA 50
           MVRPYAV+GRK K+ ++E+  ++ + EV +   AEE E +  E  G   E +  EDE++A
Sbjct: 1   MVRPYAVKGRKHKKRKIEKVVEEQKDEVLE---AEEEEGVKEEEAGSGGEAAEAEDERRA 57

Query: 49  EEAIDRMPGIPI 14
           EEA+++M GIPI
Sbjct: 58  EEAVEQMAGIPI 69


>ref|XP_008782418.1| PREDICTED: ribosomal RNA small subunit methyltransferase nep-1
           [Phoenix dactylifera]
          Length = 287

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
 Frame = -2

Query: 223 MVRPYAVRGRKKRARVEEEPQQLEAEVGDEVFAEENEQIAVEG-GENPEESTVEDEKKAE 47
           MVRP+AV+GRK + R  EE   +E E  + + AEE E +  E  G   E    EDE++AE
Sbjct: 1   MVRPHAVKGRKHKKRRMEEA--VEEEKDEVLEAEEEEGVKEEEVGNGGEAVAAEDEERAE 58

Query: 46  EAIDRMPGIPI 14
           EA+++M GIP+
Sbjct: 59  EAVEQMAGIPV 69


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