BLASTX nr result
ID: Ophiopogon25_contig00014319
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00014319
(1710 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PKA51732.1| Retrovirus-related Pol polyprotein from transposo... 50 2e-08
emb|CAN72171.1| hypothetical protein VITISV_036207 [Vitis vinifera] 40 4e-08
gb|AAT38766.2| Polyprotein, putative [Solanum demissum] 37 1e-07
ref|XP_012856116.1| PREDICTED: uncharacterized protein LOC105975... 37 6e-07
gb|PHT98668.1| hypothetical protein BC332_32459 [Capsicum chinense] 41 4e-06
emb|CAX68205.1| retrotransposon ribonuclease H, partial [Heliant... 46 6e-06
>gb|PKA51732.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Apostasia shenzhenica]
Length = 311
Score = 49.7 bits (117), Expect(2) = 2e-08
Identities = 28/78 (35%), Positives = 44/78 (56%)
Frame = +1
Query: 1282 RIIIMLLSYKNFYVVLEKYTNSNQIIVSNETRSTSGWILP*ATQFLGVQISKKQILILHS 1461
+I+ L Y ++ VLE Y++++ I +NE +STSGWI + + SKKQ I HS
Sbjct: 142 KIMYFKLHYNDYPAVLEGYSDASWITNANENKSTSGWIFTLGGGAIS-RASKKQTCISHS 200
Query: 1462 KVEFASFAMTTIVKEV*W 1515
+EF +++ KE W
Sbjct: 201 TMEFEFISLSAASKEEEW 218
Score = 39.3 bits (90), Expect(2) = 2e-08
Identities = 15/34 (44%), Positives = 26/34 (76%)
Frame = +3
Query: 1605 SKVYNGKSRHIKIKYSHVSEQSNKAVVTIIYVKS 1706
+ VYNGKSRHI ++++++ + ++TI+YVKS
Sbjct: 251 NNVYNGKSRHISLRHAYIRKLIKYDIITIMYVKS 284
>emb|CAN72171.1| hypothetical protein VITISV_036207 [Vitis vinifera]
Length = 1096
Score = 40.4 bits (93), Expect(3) = 4e-08
Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 7/181 (3%)
Frame = +2
Query: 683 CRGVEREMHCQELLVNLYAPR*APKHWHEKLDQMVFVE*FKNK*IW*VCLFLNKKYEVII 862
C +E + +L+ + Y APK WH K D + + N + +CL+++
Sbjct: 738 CVVPRKEKNVCKLVKSPYGLTQAPKQWHNKFDHFKYED---NTCVV-ICLYIDDMLIFGT 793
Query: 863 ISFI*CR*YVNFS***KYSIGNYYILSSCYDTKDTGEPNVTFAIKINRTP----*SQFH* 1030
+ C L S +D KD GE V IKI RTP SQ H
Sbjct: 794 NLEVVCE--------------TKKFLGSKFDMKDLGEAEVILGIKITRTPNGLKLSQEH- 838
Query: 1031 HGLNILRNC*RNSNRTVKMCLG-SGKLKKN-ERCMSQLKSSQITGNLMCAI-HIRLDTAF 1201
+ ILR + V + +LKKN E ++Q++ +QI G+LM + + R D A+
Sbjct: 839 YVEKILRKFEHFDCKPVSTPYDPNSQLKKNREHSVAQIEYAQIIGSLMYLMNYTRPDIAY 898
Query: 1202 A 1204
A
Sbjct: 899 A 899
Score = 33.9 bits (76), Expect(3) = 4e-08
Identities = 23/72 (31%), Positives = 37/72 (51%)
Frame = +1
Query: 1300 LSYKNFYVVLEKYTNSNQIIVSNETRSTSGWILP*ATQFLGVQISKKQILILHSKVEFAS 1479
L + F VLE ++++N I+ S+E +STSG++ + + S KQ I S +E
Sbjct: 920 LCFSGFPSVLEGFSDANWILDSDEMKSTSGYVFILGGSAVSWK-SAKQTCITQSIMEAKF 978
Query: 1480 FAMTTIVKEV*W 1515
A+ EV W
Sbjct: 979 IALENASSEVEW 990
Score = 33.1 bits (74), Expect(3) = 4e-08
Identities = 13/35 (37%), Positives = 26/35 (74%)
Frame = +3
Query: 1605 SKVYNGKSRHIKIKYSHVSEQSNKAVVTIIYVKSK 1709
SK++NGK+RHI ++++ V + V+++ +V+SK
Sbjct: 1023 SKIFNGKNRHICLRHNIVWQLLETGVISLEFVRSK 1057
>gb|AAT38766.2| Polyprotein, putative [Solanum demissum]
Length = 1355
Score = 37.0 bits (84), Expect(3) = 1e-07
Identities = 23/72 (31%), Positives = 36/72 (50%)
Frame = +1
Query: 1300 LSYKNFYVVLEKYTNSNQIIVSNETRSTSGWILP*ATQFLGVQISKKQILILHSKVEFAS 1479
L Y + ++E Y+++N I SNE +STSG++ + + S KQ I S +E
Sbjct: 1095 LHYNKYPAMIEGYSDANWITGSNEVKSTSGYVFTLGRGAVSWK-SSKQTCIARSTMESKF 1153
Query: 1480 FAMTTIVKEV*W 1515
A+ KE W
Sbjct: 1154 IALDKAGKEAEW 1165
Score = 35.8 bits (81), Expect(3) = 1e-07
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +3
Query: 1605 SKVYNGKSRHIKIKYSHVSEQSNKAVVTIIYVKS 1706
S +YNGKSRHI+ + + V + + ++TI YVKS
Sbjct: 1198 SVMYNGKSRHIRWRQNTVRQLLSSGIITIDYVKS 1231
Score = 32.7 bits (73), Expect(3) = 1e-07
Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 12/189 (6%)
Frame = +2
Query: 719 LLVNLYAPR*APKHWHEKLDQMVFVE*FK----NK*IW*VCLFLNKKYEVIIISFI*CR* 886
L+ + Y + APK WH K DQ + FK +K C+++ +I F+
Sbjct: 895 LVKSFYGLKQAPKQWHAKFDQTMLANGFKINECDK-----CVYIKNVLNHEVIVFLYVDD 949
Query: 887 YVNFS***KYSIGNYYILSSCYDTKDTGEPNVTFAIKINRTP----*SQFH*HGLNILRN 1054
+ S +LSS + KD G +V I+I +TP SQ H + IL
Sbjct: 950 MLIMSKDIDDINATKRMLSSKFAMKDLGVADVILGIRILKTPQGLALSQSH-YIEKILDK 1008
Query: 1055 C*RNSNRTVKMCLG-SGKLKKN-ERCMSQLKSSQITGNLMCAIH-IRLDTAFAVGILIKI 1225
+ VK+ + S +KN SQL+ +++ G+LM ++ R D + A+ L +
Sbjct: 1009 FKYLNFNVVKIPIDLSCTFQKNVGESDSQLEYARVLGSLMYIMNCTRPDISCAISKLSRF 1068
Query: 1226 -NYLDQVHW 1249
+ +Q HW
Sbjct: 1069 TSNPNQTHW 1077
>ref|XP_012856116.1| PREDICTED: uncharacterized protein LOC105975464 [Erythranthe guttata]
Length = 1203
Score = 36.6 bits (83), Expect(3) = 6e-07
Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 12/191 (6%)
Frame = +2
Query: 716 ELLVNLYAPR*APKHWHEKLDQMVFVE*FK----NK*IW*VCLFLNKKYEVIIISFI*CR 883
+L+ +LY + APK WHEK D+ + FK +K C+++ ++ +
Sbjct: 213 KLVKSLYGLKQAPKQWHEKFDRTILANGFKINECDK-----CVYIKNTPNEFVLICLSVD 267
Query: 884 *YVNFS***KYSIGNYYILSSCYDTKDTGEPNVTFAIKI----NRTP*SQFH*HGLNILR 1051
+ + + +LS+ +D KD G +V +KI N +Q H + +LR
Sbjct: 268 DMLIMGSNHEIIVKTKKMLSTHFDMKDMGLADVILGVKIIKNENGLVFTQSH-YIEKVLR 326
Query: 1052 NC*RNSN--RTVKMCLGSGKLKKNERCMSQLKSSQITGNLMCAIH-IRLDTAFAVGILIK 1222
+ T+ + L K + QLK SQI G+LM ++ R D A +V L +
Sbjct: 327 KFKMFDSPPATIPIDLKIHLAKNCGEPVDQLKYSQIIGSLMYVMNCTRPDIAHSVSKLSR 386
Query: 1223 INYLDQ-VHWN 1252
+ HWN
Sbjct: 387 FTSNPRNDHWN 397
Score = 35.4 bits (80), Expect(3) = 6e-07
Identities = 14/35 (40%), Positives = 25/35 (71%)
Frame = +3
Query: 1605 SKVYNGKSRHIKIKYSHVSEQSNKAVVTIIYVKSK 1709
S +YNGKSRHI+ +++ + + + +++I YVK K
Sbjct: 517 SSMYNGKSRHIRRRHNTIRQLISNGIISIDYVKFK 551
Score = 31.2 bits (69), Expect(3) = 6e-07
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +1
Query: 1300 LSYKNFYVVLEKYTNSNQIIVSNETRSTSGWILP*ATQFLGVQISKKQILILHSKVEFAS 1479
L Y + VLE Y+++N I + + +STSG++ + + S KQ I S +E
Sbjct: 414 LHYTRYPSVLEGYSDANWISDTKDYKSTSGYVFTIGGAAVSWK-STKQTCIARSTMESEF 472
Query: 1480 FAMTTIVKEV*W 1515
A+ I E W
Sbjct: 473 IALDKIGAEAEW 484
>gb|PHT98668.1| hypothetical protein BC332_32459 [Capsicum chinense]
Length = 569
Score = 41.2 bits (95), Expect(2) = 4e-06
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = +1
Query: 1300 LSYKNFYVVLEKYTNSNQIIVSNETRSTSGWILP*ATQFLGVQISKKQILILHSKVEFAS 1479
L Y +Y VLE+Y+++N I SNE +STSG++ + + + S KQ I S +E
Sbjct: 84 LHYNKYYAVLEEYSDANWITGSNEVKSTSGYVFTISRGAISWK-SSKQTCIALSIMESEF 142
Query: 1480 FAMTTIVKEV*W 1515
A+ +E W
Sbjct: 143 IALDKTGEEAEW 154
Score = 40.0 bits (92), Expect(2) = 4e-06
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +3
Query: 1605 SKVYNGKSRHIKIKYSHVSEQSNKAVVTIIYVKSK 1709
S +YNGKSRHI+ +++ + E + V+TI YVKSK
Sbjct: 187 SMMYNGKSRHIRRRHNTIRELLSSEVITIDYVKSK 221
>emb|CAX68205.1| retrotransposon ribonuclease H, partial [Helianthus annuus]
Length = 207
Score = 46.2 bits (108), Expect(2) = 6e-06
Identities = 28/75 (37%), Positives = 42/75 (56%)
Frame = +1
Query: 1300 LSYKNFYVVLEKYTNSNQIIVSNETRSTSGWILP*ATQFLGVQISKKQILILHSKVEFAS 1479
L+Y +F +LE Y++++ I +N+++STSGWI A + SKKQ I HS +E
Sbjct: 53 LTYTSFSRILEGYSDASWIDRTNDSKSTSGWIFTLAGGAVS-WASKKQTCIAHSTMEAEL 111
Query: 1480 FAMTTIVKEV*WQTD 1524
A+ KE W D
Sbjct: 112 IALAAAGKEAEWIRD 126
Score = 34.7 bits (78), Expect(2) = 6e-06
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +3
Query: 1593 SHMLSKVYNGKSRHIKIKYSHVSEQSNKAVVTIIYVKS 1706
S + + VYNG SRHI +++++V + + ++YVK+
Sbjct: 152 SKVYNAVYNGGSRHIGLRHNYVRQLLESGTIKVVYVKT 189