BLASTX nr result
ID: Ophiopogon25_contig00013603
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00013603
(810 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020276066.1| DNA repair protein UVH3 [Asparagus officinal... 139 2e-33
ref|XP_010942436.1| PREDICTED: DNA repair protein UVH3 [Elaeis g... 89 3e-16
ref|XP_018675319.1| PREDICTED: DNA repair protein UVH3 isoform X... 86 3e-15
ref|XP_018675317.1| PREDICTED: DNA repair protein UVH3 isoform X... 86 3e-15
ref|XP_018675318.1| PREDICTED: DNA repair protein UVH3 isoform X... 81 2e-13
>ref|XP_020276066.1| DNA repair protein UVH3 [Asparagus officinalis]
gb|ONK63702.1| uncharacterized protein A4U43_C07F18000 [Asparagus officinalis]
Length = 1495
Score = 139 bits (349), Expect = 2e-33
Identities = 88/197 (44%), Positives = 104/197 (52%), Gaps = 1/197 (0%)
Frame = +3
Query: 171 IDAHDLKDVAKEHESVEQGSSIRIGPTGDASNHKEGSSCSPQVSLSRDYLLSGGGFCTDA 350
+D D A++ E VEQG++IR T D S+ KEG + SP V LS DYL SGGGFC D
Sbjct: 1329 VDVDGSNDAAEKQEPVEQGNNIR---TADGSDQKEGDNHSPDVGLSGDYLQSGGGFCVDE 1385
Query: 351 SEAQGDALRPAASPAINSAEKDSAAGDRYSSALDRQPVHPTSLYDGSHSKDYRLTGGAFR 530
SE QG + LD Q HP L SHS D L GG F
Sbjct: 1386 SETQG-------------------------NTLDCQTGHPNMLTGNSHSGDCLLAGGGFC 1420
Query: 531 MDESEIQGD-ATHVDAGSGKEDQERYGRNTREPTGGNSLARMLMDSLYPXXXXXXXDGET 707
DE+E+Q D TH+DAGS K D+E G +EPTGGNS A DS +GE
Sbjct: 1421 TDENEVQVDTTTHLDAGSAKADKEPCGLTNKEPTGGNSRAIKHGDS--SCSEGAEDEGEI 1478
Query: 708 NFSLKAMPSLRKKRNKL 758
N L+AMPSLRKKR K+
Sbjct: 1479 NVGLRAMPSLRKKRRKV 1495
>ref|XP_010942436.1| PREDICTED: DNA repair protein UVH3 [Elaeis guineensis]
Length = 1567
Score = 89.4 bits (220), Expect = 3e-16
Identities = 72/214 (33%), Positives = 98/214 (45%), Gaps = 13/214 (6%)
Frame = +3
Query: 153 NSPNQQIDAHDLKDVAKEHESVEQ--GSSIRIGPTGDASNHKEGSSCSPQVSLSRDYLLS 326
N + Q+D +DL +VA EH+ E+ +IR +H E S LSRDYLL
Sbjct: 1366 NVSSNQMDENDLHEVAVEHKLAEEDGNGTIRDSIPDIGGSHSEDS-------LSRDYLLR 1418
Query: 327 GGGFCTDASEAQGDALRPAASPAINSAEKDSA-AGDRYSSALDRQPVHPTSLYDGSHSKD 503
GGGFC D S+ QG A +P +SA KD G+ ++ LD P G+ S D
Sbjct: 1419 GGGFCADRSDEQGGAFQPGDGQMQDSAGKDEDWVGE--AAGLDCGKESPLK---GNLSND 1473
Query: 504 YRLTGGAFRMDESEIQGDATHVDAGSGKEDQERYGRNT----------REPTGGNSLARM 653
Y +GG F MDES++QG+A AG + G + + G +
Sbjct: 1474 YLRSGGGFCMDESDLQGEAIQPAAGPVMDSLRPLGEMSCVSEDTQNLDLDSISGQQGTKR 1533
Query: 654 LMDSLYPXXXXXXXDGETNFSLKAMPSLRKKRNK 755
+ + L GE L AMPSLR+KR K
Sbjct: 1534 VSEDLV-SDDLLTLHGEVKPGLSAMPSLRRKRRK 1566
>ref|XP_018675319.1| PREDICTED: DNA repair protein UVH3 isoform X3 [Musa acuminata subsp.
malaccensis]
Length = 1511
Score = 86.3 bits (212), Expect = 3e-15
Identities = 72/204 (35%), Positives = 95/204 (46%), Gaps = 14/204 (6%)
Frame = +3
Query: 186 LKDVAKEHESVEQGSSIRIGPTGDASNHKEGSSCSPQVSLSRDYLLSGGGFCTDASEAQG 365
L VA E E +E + R+G D S+ +G+ + S S +YL SGGGFC D + QG
Sbjct: 1322 LLGVATEQEPIENDNRSRVG---DLSDVDKGAHTFSKDSSSGEYLFSGGGFCLDDNVLQG 1378
Query: 366 DALRPAASPAINSAEKDSAAGDRYSSALDRQPVHPTSLYDGSHSKDYRLTGGAFRMDESE 545
DA++ AASP SAE D DR +L D + S+ Y +GG F MDES+
Sbjct: 1379 DAIQLAASPIQGSAEMDRE---------DRDGCKQHALEDDT-SRGYLFSGGGFCMDESD 1428
Query: 546 IQGDATHVDAGSGKEDQERYGRNTRE-------------PTGGNSLARMLMD-SLYPXXX 683
Q DAT S + + R R T + P + L D SL
Sbjct: 1429 EQVDATR--PTSSQIENSRPSRVTSDISDDPQKFSGHSVPDDMKKTSEPLQDSSLLVENI 1486
Query: 684 XXXXDGETNFSLKAMPSLRKKRNK 755
DG++N L AM SLR+KR K
Sbjct: 1487 TSFQDGQSNLGLSAMSSLRRKRRK 1510
>ref|XP_018675317.1| PREDICTED: DNA repair protein UVH3 isoform X1 [Musa acuminata subsp.
malaccensis]
Length = 1576
Score = 86.3 bits (212), Expect = 3e-15
Identities = 72/204 (35%), Positives = 95/204 (46%), Gaps = 14/204 (6%)
Frame = +3
Query: 186 LKDVAKEHESVEQGSSIRIGPTGDASNHKEGSSCSPQVSLSRDYLLSGGGFCTDASEAQG 365
L VA E E +E + R+G D S+ +G+ + S S +YL SGGGFC D + QG
Sbjct: 1387 LLGVATEQEPIENDNRSRVG---DLSDVDKGAHTFSKDSSSGEYLFSGGGFCLDDNVLQG 1443
Query: 366 DALRPAASPAINSAEKDSAAGDRYSSALDRQPVHPTSLYDGSHSKDYRLTGGAFRMDESE 545
DA++ AASP SAE D DR +L D + S+ Y +GG F MDES+
Sbjct: 1444 DAIQLAASPIQGSAEMDRE---------DRDGCKQHALEDDT-SRGYLFSGGGFCMDESD 1493
Query: 546 IQGDATHVDAGSGKEDQERYGRNTRE-------------PTGGNSLARMLMD-SLYPXXX 683
Q DAT S + + R R T + P + L D SL
Sbjct: 1494 EQVDATR--PTSSQIENSRPSRVTSDISDDPQKFSGHSVPDDMKKTSEPLQDSSLLVENI 1551
Query: 684 XXXXDGETNFSLKAMPSLRKKRNK 755
DG++N L AM SLR+KR K
Sbjct: 1552 TSFQDGQSNLGLSAMSSLRRKRRK 1575
>ref|XP_018675318.1| PREDICTED: DNA repair protein UVH3 isoform X2 [Musa acuminata subsp.
malaccensis]
Length = 1534
Score = 80.9 bits (198), Expect = 2e-13
Identities = 66/190 (34%), Positives = 87/190 (45%)
Frame = +3
Query: 186 LKDVAKEHESVEQGSSIRIGPTGDASNHKEGSSCSPQVSLSRDYLLSGGGFCTDASEAQG 365
L VA E E +E + R+G D S+ +G+ + S S +YL SGGGFC D + QG
Sbjct: 1387 LLGVATEQEPIENDNRSRVG---DLSDVDKGAHTFSKDSSSGEYLFSGGGFCLDDNVLQG 1443
Query: 366 DALRPAASPAINSAEKDSAAGDRYSSALDRQPVHPTSLYDGSHSKDYRLTGGAFRMDESE 545
DA++ AASP SAE D DR +L D + S+ Y +GG F MDES+
Sbjct: 1444 DAIQLAASPIQGSAEMDRE---------DRDGCKQHALEDDT-SRGYLFSGGGFCMDESD 1493
Query: 546 IQGDATHVDAGSGKEDQERYGRNTREPTGGNSLARMLMDSLYPXXXXXXXDGETNFSLKA 725
Q DAT S + + R R DG++N L A
Sbjct: 1494 EQVDATRPT--SSQIENSRPSR----------------------------DGQSNLGLSA 1523
Query: 726 MPSLRKKRNK 755
M SLR+KR K
Sbjct: 1524 MSSLRRKRRK 1533