BLASTX nr result

ID: Ophiopogon25_contig00013040 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00013040
         (1380 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK79192.1| uncharacterized protein A4U43_C01F3860 [Asparagus...    91   8e-17
ref|XP_020272605.1| splicing factor, suppressor of white-apricot...    91   1e-15
ref|XP_010923405.1| PREDICTED: splicing factor, suppressor of wh...    61   3e-06
ref|XP_010923396.1| PREDICTED: splicing factor, suppressor of wh...    61   3e-06

>gb|ONK79192.1| uncharacterized protein A4U43_C01F3860 [Asparagus officinalis]
          Length = 271

 Score = 90.9 bits (224), Expect = 8e-17
 Identities = 42/56 (75%), Positives = 48/56 (85%)
 Frame = -1

Query: 168 DAGTTERSEATGSGSYQAVPFSYGNNHGSADSNSCGPNHSAFHPPFSVPTGLLNHL 1
           D  TTERSEATGSGSYQAVPFSYGNN G AD NS G +HS++HPPFSVPT L+++L
Sbjct: 88  DEETTERSEATGSGSYQAVPFSYGNNGGLADPNSYGQDHSSYHPPFSVPTSLISNL 143


>ref|XP_020272605.1| splicing factor, suppressor of white-apricot homolog [Asparagus
           officinalis]
          Length = 753

 Score = 90.9 bits (224), Expect = 1e-15
 Identities = 42/56 (75%), Positives = 48/56 (85%)
 Frame = -1

Query: 168 DAGTTERSEATGSGSYQAVPFSYGNNHGSADSNSCGPNHSAFHPPFSVPTGLLNHL 1
           D  TTERSEATGSGSYQAVPFSYGNN G AD NS G +HS++HPPFSVPT L+++L
Sbjct: 88  DEETTERSEATGSGSYQAVPFSYGNNGGLADPNSYGQDHSSYHPPFSVPTSLISNL 143


>ref|XP_010923405.1| PREDICTED: splicing factor, suppressor of white-apricot homolog
           isoform X2 [Elaeis guineensis]
          Length = 879

 Score = 61.2 bits (147), Expect = 3e-06
 Identities = 31/56 (55%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
 Frame = -1

Query: 162 GTTERSEATGSGSYQAVPFSYGNNHGSADSNS--CGPNHSAFHPPFSVPTGLLNHL 1
           GT    EAT SG+YQAVPFSY +   SAD  +   GPN S +HPPF VP  LL++L
Sbjct: 107 GTRNGPEATVSGAYQAVPFSYVDTDSSADPRNFGSGPNQSGYHPPFPVPESLLSNL 162


>ref|XP_010923396.1| PREDICTED: splicing factor, suppressor of white-apricot homolog
           isoform X1 [Elaeis guineensis]
          Length = 894

 Score = 61.2 bits (147), Expect = 3e-06
 Identities = 31/56 (55%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
 Frame = -1

Query: 162 GTTERSEATGSGSYQAVPFSYGNNHGSADSNS--CGPNHSAFHPPFSVPTGLLNHL 1
           GT    EAT SG+YQAVPFSY +   SAD  +   GPN S +HPPF VP  LL++L
Sbjct: 107 GTRNGPEATVSGAYQAVPFSYVDTDSSADPRNFGSGPNQSGYHPPFPVPESLLSNL 162


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