BLASTX nr result
ID: Ophiopogon25_contig00012480
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00012480
(1480 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK75253.1| uncharacterized protein A4U43_C03F14950 [Asparagu... 388 e-127
ref|XP_020257102.1| DNA-directed RNA polymerase III subunit RPC5... 388 e-126
ref|XP_020257101.1| DNA-directed RNA polymerase III subunit RPC5... 388 e-126
gb|PKU70089.1| hypothetical protein MA16_Dca016373 [Dendrobium c... 288 3e-86
ref|XP_020698342.1| DNA-directed RNA polymerase III subunit RPC5... 288 3e-86
ref|XP_008777120.1| PREDICTED: DNA-directed RNA polymerase III s... 282 1e-83
ref|XP_008777118.1| PREDICTED: DNA-directed RNA polymerase III s... 282 1e-83
ref|XP_020578730.1| DNA-directed RNA polymerase III subunit RPC5... 275 2e-81
ref|XP_020578729.1| DNA-directed RNA polymerase III subunit RPC5... 275 2e-81
ref|XP_010906546.1| PREDICTED: DNA-directed RNA polymerase III s... 271 9e-80
ref|XP_010906545.1| PREDICTED: DNA-directed RNA polymerase III s... 271 1e-79
ref|XP_010906544.1| PREDICTED: DNA-directed RNA polymerase III s... 271 1e-79
ref|XP_009392124.1| PREDICTED: DNA-directed RNA polymerase III s... 251 2e-72
gb|OVA04539.1| DNA-directed RNA polymerase III subunit Rpc5 [Mac... 244 7e-70
ref|XP_010254912.1| PREDICTED: DNA-directed RNA polymerase III s... 223 1e-61
gb|PKA54102.1| hypothetical protein AXF42_Ash018112 [Apostasia s... 214 6e-60
ref|XP_021847883.1| DNA-directed RNA polymerase III subunit RPC5... 216 5e-59
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s... 213 4e-58
ref|XP_010649170.1| PREDICTED: DNA-directed RNA polymerase III s... 213 5e-58
emb|CDP02819.1| unnamed protein product [Coffea canephora] 211 5e-57
>gb|ONK75253.1| uncharacterized protein A4U43_C03F14950 [Asparagus officinalis]
Length = 521
Score = 388 bits (997), Expect = e-127
Identities = 208/340 (61%), Positives = 249/340 (73%), Gaps = 6/340 (1%)
Frame = +2
Query: 5 VGPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLW 184
+GPS+R LL +PLEERLKKW SEGPQVNRF++LLHLAP +S+EDVLKVL+ +A LVQGLW
Sbjct: 186 LGPSKRDLLLLPLEERLKKWFSEGPQVNRFSALLHLAPTNSVEDVLKVLKLYAHLVQGLW 245
Query: 185 VSKSSLRCDGVLARARDYILYQFMKSPVIHYDKHRPPPPFFKQILVQLAIQRPTLNDWKF 364
V+KSSL GV A ARDYIL F K+ VI YD + PP +QIL ++A+ RP+LNDWKF
Sbjct: 246 VAKSSLVYIGVEASARDYILSLFAKNCVIRYDTEKRLPPLVQQILGRIAVHRPSLNDWKF 305
Query: 365 KESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNPHLLKK 544
KE DLSFIK YP+IVKEQE +W+GRV+QL SL GA KTKE+Q MD L+KSLNPHLLKK
Sbjct: 306 KEPTDLSFIKCYPDIVKEQEQAWAGRVKQLRDSLVGAQKTKESQFMDNLIKSLNPHLLKK 365
Query: 545 TVDL------GSNGANKIVSSTEMTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKELKGS 706
TVDL +G + V S+ TM NG RED+ K+L EIFHLHG L+AI K+L +
Sbjct: 366 TVDLREVKHTPKDGIDNTVISSTTTMLNGTREDINKALLEIFHLHGARRLDAIRKDLTAA 425
Query: 707 INXXXXXXXXXXXXXXXDIHGVYALKSLRNPTLDPLRKFFIDLFRKKNANVKFKEQDVRR 886
+ +IHGVY LKS RNP L LR F I LFR+K ANVKF+E DVR+
Sbjct: 426 TH----EVQSALSEVAVNIHGVYVLKSPRNPALKELRNFIISLFRQKKANVKFRELDVRK 481
Query: 887 AAHNFLKRNISDSEFKQVVHELCISKGGGLSLKTADSDQK 1006
AA N LKRNISDSEFK V++E CI GGG++LK+ DSDQK
Sbjct: 482 AAQNHLKRNISDSEFKLVINEFCICTGGGVALKSGDSDQK 521
>ref|XP_020257102.1| DNA-directed RNA polymerase III subunit RPC5 isoform X2 [Asparagus
officinalis]
Length = 589
Score = 388 bits (997), Expect = e-126
Identities = 208/340 (61%), Positives = 249/340 (73%), Gaps = 6/340 (1%)
Frame = +2
Query: 5 VGPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLW 184
+GPS+R LL +PLEERLKKW SEGPQVNRF++LLHLAP +S+EDVLKVL+ +A LVQGLW
Sbjct: 254 LGPSKRDLLLLPLEERLKKWFSEGPQVNRFSALLHLAPTNSVEDVLKVLKLYAHLVQGLW 313
Query: 185 VSKSSLRCDGVLARARDYILYQFMKSPVIHYDKHRPPPPFFKQILVQLAIQRPTLNDWKF 364
V+KSSL GV A ARDYIL F K+ VI YD + PP +QIL ++A+ RP+LNDWKF
Sbjct: 314 VAKSSLVYIGVEASARDYILSLFAKNCVIRYDTEKRLPPLVQQILGRIAVHRPSLNDWKF 373
Query: 365 KESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNPHLLKK 544
KE DLSFIK YP+IVKEQE +W+GRV+QL SL GA KTKE+Q MD L+KSLNPHLLKK
Sbjct: 374 KEPTDLSFIKCYPDIVKEQEQAWAGRVKQLRDSLVGAQKTKESQFMDNLIKSLNPHLLKK 433
Query: 545 TVDL------GSNGANKIVSSTEMTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKELKGS 706
TVDL +G + V S+ TM NG RED+ K+L EIFHLHG L+AI K+L +
Sbjct: 434 TVDLREVKHTPKDGIDNTVISSTTTMLNGTREDINKALLEIFHLHGARRLDAIRKDLTAA 493
Query: 707 INXXXXXXXXXXXXXXXDIHGVYALKSLRNPTLDPLRKFFIDLFRKKNANVKFKEQDVRR 886
+ +IHGVY LKS RNP L LR F I LFR+K ANVKF+E DVR+
Sbjct: 494 TH----EVQSALSEVAVNIHGVYVLKSPRNPALKELRNFIISLFRQKKANVKFRELDVRK 549
Query: 887 AAHNFLKRNISDSEFKQVVHELCISKGGGLSLKTADSDQK 1006
AA N LKRNISDSEFK V++E CI GGG++LK+ DSDQK
Sbjct: 550 AAQNHLKRNISDSEFKLVINEFCICTGGGVALKSGDSDQK 589
>ref|XP_020257101.1| DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Asparagus
officinalis]
Length = 590
Score = 388 bits (997), Expect = e-126
Identities = 208/340 (61%), Positives = 249/340 (73%), Gaps = 6/340 (1%)
Frame = +2
Query: 5 VGPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLW 184
+GPS+R LL +PLEERLKKW SEGPQVNRF++LLHLAP +S+EDVLKVL+ +A LVQGLW
Sbjct: 255 LGPSKRDLLLLPLEERLKKWFSEGPQVNRFSALLHLAPTNSVEDVLKVLKLYAHLVQGLW 314
Query: 185 VSKSSLRCDGVLARARDYILYQFMKSPVIHYDKHRPPPPFFKQILVQLAIQRPTLNDWKF 364
V+KSSL GV A ARDYIL F K+ VI YD + PP +QIL ++A+ RP+LNDWKF
Sbjct: 315 VAKSSLVYIGVEASARDYILSLFAKNCVIRYDTEKRLPPLVQQILGRIAVHRPSLNDWKF 374
Query: 365 KESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNPHLLKK 544
KE DLSFIK YP+IVKEQE +W+GRV+QL SL GA KTKE+Q MD L+KSLNPHLLKK
Sbjct: 375 KEPTDLSFIKCYPDIVKEQEQAWAGRVKQLRDSLVGAQKTKESQFMDNLIKSLNPHLLKK 434
Query: 545 TVDL------GSNGANKIVSSTEMTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKELKGS 706
TVDL +G + V S+ TM NG RED+ K+L EIFHLHG L+AI K+L +
Sbjct: 435 TVDLREVKHTPKDGIDNTVISSTTTMLNGTREDINKALLEIFHLHGARRLDAIRKDLTAA 494
Query: 707 INXXXXXXXXXXXXXXXDIHGVYALKSLRNPTLDPLRKFFIDLFRKKNANVKFKEQDVRR 886
+ +IHGVY LKS RNP L LR F I LFR+K ANVKF+E DVR+
Sbjct: 495 TH----EVQSALSEVAVNIHGVYVLKSPRNPALKELRNFIISLFRQKKANVKFRELDVRK 550
Query: 887 AAHNFLKRNISDSEFKQVVHELCISKGGGLSLKTADSDQK 1006
AA N LKRNISDSEFK V++E CI GGG++LK+ DSDQK
Sbjct: 551 AAQNHLKRNISDSEFKLVINEFCICTGGGVALKSGDSDQK 590
>gb|PKU70089.1| hypothetical protein MA16_Dca016373 [Dendrobium catenatum]
Length = 657
Score = 288 bits (736), Expect = 3e-86
Identities = 158/330 (47%), Positives = 213/330 (64%), Gaps = 3/330 (0%)
Frame = +2
Query: 8 GPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWV 187
GPS+R LL+ PLEERLK+WLSEGPQVNRF +LLHLAPNDS+EDVLK+LQ HA LVQGLWV
Sbjct: 325 GPSKRYLLTRPLEERLKQWLSEGPQVNRFVALLHLAPNDSVEDVLKLLQHHAYLVQGLWV 384
Query: 188 SKSSLRCDGVLARARDYILYQFMKSPVIHYD--KHRPPPPFFKQILVQLAIQRPTLNDWK 361
SKSSL DG+ A RDYIL QF K +H K P K +L LA++R L DWK
Sbjct: 385 SKSSLLHDGLSALYRDYILLQFSKKHAVHESILKLVKPEDLRKSLLKPLAVERSLLKDWK 444
Query: 362 FKESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNPHLLK 541
FKE DLSFIKQYP IVKEQE +WS R ++++ SL+G+GK + + ++ S + + K
Sbjct: 445 FKEDRDLSFIKQYPEIVKEQEQAWSVREKKILESLHGSGKNISSSLKSSVSPSTS-SITK 503
Query: 542 KTVDLGSN-GANKIVSSTEMTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKELKGSINXX 718
+++LG + N + SS TM +E L K++ E+ + VLSLN+I++ L+G+ N
Sbjct: 504 GSIELGHHKDRNDVRSSVVSTMPTKGQEALEKAILELLRTYKVLSLNSIVQGLQGNANAG 563
Query: 719 XXXXXXXXXXXXXDIHGVYALKSLRNPTLDPLRKFFIDLFRKKNANVKFKEQDVRRAAHN 898
+H VY LKSL P+LD R I+ K N K K+Q+++ AA
Sbjct: 564 LPEIENVADQIAMKVHDVYVLKSLGKPSLDKFRHVVIEYLIGKGRNAKVKKQEIKLAAQY 623
Query: 899 FLKRNISDSEFKQVVHELCISKGGGLSLKT 988
LK+++SD+E+ V++ELC+S GG LK+
Sbjct: 624 RLKKDVSDAEYSMVMNELCLSSGGSWMLKS 653
>ref|XP_020698342.1| DNA-directed RNA polymerase III subunit RPC5 [Dendrobium catenatum]
Length = 657
Score = 288 bits (736), Expect = 3e-86
Identities = 158/330 (47%), Positives = 213/330 (64%), Gaps = 3/330 (0%)
Frame = +2
Query: 8 GPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWV 187
GPS+R LL+ PLEERLK+WLSEGPQVNRF +LLHLAPNDS+EDVLK+LQ HA LVQGLWV
Sbjct: 325 GPSKRYLLTRPLEERLKQWLSEGPQVNRFVALLHLAPNDSVEDVLKLLQHHAYLVQGLWV 384
Query: 188 SKSSLRCDGVLARARDYILYQFMKSPVIHYD--KHRPPPPFFKQILVQLAIQRPTLNDWK 361
SKSSL DG+ A RDYIL QF K +H K P K +L LA++R L DWK
Sbjct: 385 SKSSLLHDGLSALYRDYILLQFSKKHAVHESILKLVKPEDLRKSLLKPLAVERSLLKDWK 444
Query: 362 FKESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNPHLLK 541
FKE DLSFIKQYP IVKEQE +WS R ++++ SL+G+GK + + ++ S + + K
Sbjct: 445 FKEDRDLSFIKQYPEIVKEQEQAWSVREKKILESLHGSGKNISSSLKSSVSPSTS-SITK 503
Query: 542 KTVDLGSN-GANKIVSSTEMTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKELKGSINXX 718
+++LG + N + SS TM +E L K++ E+ + VLSLN+I++ L+G+ N
Sbjct: 504 GSIELGHHKDRNDVRSSVVSTMPTKGQEALEKAILELLRTYKVLSLNSIVQGLQGNANAG 563
Query: 719 XXXXXXXXXXXXXDIHGVYALKSLRNPTLDPLRKFFIDLFRKKNANVKFKEQDVRRAAHN 898
+H VY LKSL P+LD R I+ K N K K+Q+++ AA
Sbjct: 564 LPEIENVADQIAMKVHDVYVLKSLGKPSLDKFRHVVIEYLIGKGRNAKVKKQEIKLAAQY 623
Query: 899 FLKRNISDSEFKQVVHELCISKGGGLSLKT 988
LK+++SD+E+ V++ELC+S GG LK+
Sbjct: 624 RLKKDVSDAEYSMVMNELCLSSGGSWMLKS 653
>ref|XP_008777120.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2
[Phoenix dactylifera]
Length = 701
Score = 282 bits (721), Expect = 1e-83
Identities = 170/362 (46%), Positives = 217/362 (59%), Gaps = 33/362 (9%)
Frame = +2
Query: 8 GPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWV 187
GP RRVLLSMPLEERLKKWL+EG QVNRF +L+HLAP +S +DVLKVLQ HA LVQGLWV
Sbjct: 346 GPPRRVLLSMPLEERLKKWLTEGSQVNRFDALMHLAPTNSEKDVLKVLQLHAYLVQGLWV 405
Query: 188 SKSSLRCDGVLARARDYILYQFMKSPVIHYDKH---RPPPPFFKQILVQLAIQRPTLNDW 358
+KSSL +G A ARD IL+ F +PVIH D R P K IL LA++R +DW
Sbjct: 406 TKSSLLYEGFNALARDRILFLFSTNPVIHSDNLKTLRSAP--LKHILSPLAVERSVFSDW 463
Query: 359 KFKESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNPHLL 538
KFKE+ D+SF+K+YP+IVKEQE +WS R EQ M +L GK + SL+P+++
Sbjct: 464 KFKEATDISFLKRYPDIVKEQECAWSSREEQFMDNLRRFGKNIHMMTKN----SLSPNIV 519
Query: 539 KKTVDLG------SNGANKIVSSTEMTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKEL- 697
K T LG + +SS TMS+ RE+L ++L +IF V SLN+I+ L
Sbjct: 520 KNTGALGRVDPDANRSKEGTMSSAGTTMSSETRENLPRALFKIFQEKRVRSLNSIVSGLR 579
Query: 698 -----------------------KGSINXXXXXXXXXXXXXXXDIHGVYALKSLRNPTLD 808
K + +IHG+Y LKS+ NPTLD
Sbjct: 580 DLAISSSSRPRDDAKTKALANAAKNGADAPLPELQSVISQVAANIHGLYVLKSMGNPTLD 639
Query: 809 PLRKFFIDLFRKKNANVKFKEQDVRRAAHNFLKRNISDSEFKQVVHELCISKGGGLSLKT 988
PLR IDLFR K N K K+Q++ +AA LKRNI+DSE+ QVV+ELC+S G L++
Sbjct: 640 PLRNVVIDLFRGKEPNAKLKKQEISKAAEFRLKRNITDSEYNQVVNELCVSSKGAWVLRS 699
Query: 989 AD 994
D
Sbjct: 700 DD 701
>ref|XP_008777118.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
[Phoenix dactylifera]
ref|XP_008777119.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
[Phoenix dactylifera]
Length = 702
Score = 282 bits (721), Expect = 1e-83
Identities = 170/362 (46%), Positives = 217/362 (59%), Gaps = 33/362 (9%)
Frame = +2
Query: 8 GPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWV 187
GP RRVLLSMPLEERLKKWL+EG QVNRF +L+HLAP +S +DVLKVLQ HA LVQGLWV
Sbjct: 347 GPPRRVLLSMPLEERLKKWLTEGSQVNRFDALMHLAPTNSEKDVLKVLQLHAYLVQGLWV 406
Query: 188 SKSSLRCDGVLARARDYILYQFMKSPVIHYDKH---RPPPPFFKQILVQLAIQRPTLNDW 358
+KSSL +G A ARD IL+ F +PVIH D R P K IL LA++R +DW
Sbjct: 407 TKSSLLYEGFNALARDRILFLFSTNPVIHSDNLKTLRSAP--LKHILSPLAVERSVFSDW 464
Query: 359 KFKESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNPHLL 538
KFKE+ D+SF+K+YP+IVKEQE +WS R EQ M +L GK + SL+P+++
Sbjct: 465 KFKEATDISFLKRYPDIVKEQECAWSSREEQFMDNLRRFGKNIHMMTKN----SLSPNIV 520
Query: 539 KKTVDLG------SNGANKIVSSTEMTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKEL- 697
K T LG + +SS TMS+ RE+L ++L +IF V SLN+I+ L
Sbjct: 521 KNTGALGRVDPDANRSKEGTMSSAGTTMSSETRENLPRALFKIFQEKRVRSLNSIVSGLR 580
Query: 698 -----------------------KGSINXXXXXXXXXXXXXXXDIHGVYALKSLRNPTLD 808
K + +IHG+Y LKS+ NPTLD
Sbjct: 581 DLAISSSSRPRDDAKTKALANAAKNGADAPLPELQSVISQVAANIHGLYVLKSMGNPTLD 640
Query: 809 PLRKFFIDLFRKKNANVKFKEQDVRRAAHNFLKRNISDSEFKQVVHELCISKGGGLSLKT 988
PLR IDLFR K N K K+Q++ +AA LKRNI+DSE+ QVV+ELC+S G L++
Sbjct: 641 PLRNVVIDLFRGKEPNAKLKKQEISKAAEFRLKRNITDSEYNQVVNELCVSSKGAWVLRS 700
Query: 989 AD 994
D
Sbjct: 701 DD 702
>ref|XP_020578730.1| DNA-directed RNA polymerase III subunit RPC5 isoform X2 [Phalaenopsis
equestris]
Length = 650
Score = 275 bits (703), Expect = 2e-81
Identities = 158/333 (47%), Positives = 209/333 (62%), Gaps = 5/333 (1%)
Frame = +2
Query: 5 VGPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLW 184
+G +R LL+ PLE+RLK+WLSEGPQVNRF +LLHLAPNDS+EDVL LQ++A LVQGLW
Sbjct: 317 IGSLKRDLLTKPLEDRLKQWLSEGPQVNRFTALLHLAPNDSVEDVLTQLQRYAYLVQGLW 376
Query: 185 VSKSSLRCDGVLARARDYILYQFMKSPVIHYDKHR--PPPPFFKQILVQLAIQRPTLNDW 358
VSKSSL DG+ A RDYIL QF K +H K + P K +L LA++RP L DW
Sbjct: 377 VSKSSLFHDGLPALYRDYILLQFSKLHAVHDSKLKVVKPEDLRKSLLKPLAVERPLLQDW 436
Query: 359 KFKESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMD--TLVKSLNPH 532
KFKE D SFIKQYP IVKEQE +WS R ++++ SL G++ + + + L S P+
Sbjct: 437 KFKEDTDSSFIKQYPEIVKEQELAWSVREKEILESLPAGGRSFSSVLKNYANLGISSKPN 496
Query: 533 LLKKTVDLGSN-GANKIVSSTEMTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKELKGSI 709
+++ G N + + SS M N +E L KS+ E+ HL+ VLSLN+II+ L+G
Sbjct: 497 ---GSIEPGHNRDRSDLKSSVFANMPNKRQEPLAKSILELLHLYKVLSLNSIIQGLQGKT 553
Query: 710 NXXXXXXXXXXXXXXXDIHGVYALKSLRNPTLDPLRKFFIDLFRKKNANVKFKEQDVRRA 889
N IH +Y LKSL PTLD R I+ F K N K K+Q+++ A
Sbjct: 554 NAGSAEVQSAADQIALKIHDIYVLKSLGKPTLDQFRNVVIEYFIGKGRNAKVKKQEIKLA 613
Query: 890 AHNFLKRNISDSEFKQVVHELCISKGGGLSLKT 988
A LKR +SD ++ QV++ELC+S GG LK+
Sbjct: 614 AQYRLKRVVSDVDYGQVMNELCVSSGGSWMLKS 646
>ref|XP_020578729.1| DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Phalaenopsis
equestris]
Length = 655
Score = 275 bits (703), Expect = 2e-81
Identities = 158/333 (47%), Positives = 209/333 (62%), Gaps = 5/333 (1%)
Frame = +2
Query: 5 VGPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLW 184
+G +R LL+ PLE+RLK+WLSEGPQVNRF +LLHLAPNDS+EDVL LQ++A LVQGLW
Sbjct: 322 IGSLKRDLLTKPLEDRLKQWLSEGPQVNRFTALLHLAPNDSVEDVLTQLQRYAYLVQGLW 381
Query: 185 VSKSSLRCDGVLARARDYILYQFMKSPVIHYDKHR--PPPPFFKQILVQLAIQRPTLNDW 358
VSKSSL DG+ A RDYIL QF K +H K + P K +L LA++RP L DW
Sbjct: 382 VSKSSLFHDGLPALYRDYILLQFSKLHAVHDSKLKVVKPEDLRKSLLKPLAVERPLLQDW 441
Query: 359 KFKESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMD--TLVKSLNPH 532
KFKE D SFIKQYP IVKEQE +WS R ++++ SL G++ + + + L S P+
Sbjct: 442 KFKEDTDSSFIKQYPEIVKEQELAWSVREKEILESLPAGGRSFSSVLKNYANLGISSKPN 501
Query: 533 LLKKTVDLGSN-GANKIVSSTEMTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKELKGSI 709
+++ G N + + SS M N +E L KS+ E+ HL+ VLSLN+II+ L+G
Sbjct: 502 ---GSIEPGHNRDRSDLKSSVFANMPNKRQEPLAKSILELLHLYKVLSLNSIIQGLQGKT 558
Query: 710 NXXXXXXXXXXXXXXXDIHGVYALKSLRNPTLDPLRKFFIDLFRKKNANVKFKEQDVRRA 889
N IH +Y LKSL PTLD R I+ F K N K K+Q+++ A
Sbjct: 559 NAGSAEVQSAADQIALKIHDIYVLKSLGKPTLDQFRNVVIEYFIGKGRNAKVKKQEIKLA 618
Query: 890 AHNFLKRNISDSEFKQVVHELCISKGGGLSLKT 988
A LKR +SD ++ QV++ELC+S GG LK+
Sbjct: 619 AQYRLKRVVSDVDYGQVMNELCVSSGGSWMLKS 651
>ref|XP_010906546.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X3
[Elaeis guineensis]
Length = 695
Score = 271 bits (694), Expect = 9e-80
Identities = 165/362 (45%), Positives = 218/362 (60%), Gaps = 33/362 (9%)
Frame = +2
Query: 8 GPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWV 187
GP RRVLLSMPLEERL KWL+E QVN F +L++LAP +S +DVLK+LQ HA LVQGLWV
Sbjct: 340 GPPRRVLLSMPLEERLNKWLTECSQVNHFDALMYLAPTNSEKDVLKLLQLHAYLVQGLWV 399
Query: 188 SKSSLRCDGVLARARDYILYQFMKSPVIHYDKH---RPPPPFFKQILVQLAIQRPTLNDW 358
+KSSL +G A ARD+IL+ F K+PVIH DK R P K IL LA++R +DW
Sbjct: 400 TKSSLLYEGFNALARDHILFLFSKNPVIHSDKLKTLRSAP--LKHILSTLAVERSVFSDW 457
Query: 359 KFKESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNPHLL 538
KFKE D+SF+K+YP+IVKEQE +WS R EQ M +L G+ + SL+P+++
Sbjct: 458 KFKEPTDISFLKRYPDIVKEQECAWSSREEQFMDNLRRFGRNIHMMTKN----SLSPNIM 513
Query: 539 KKT-----VDLGSNGANK-IVSSTEMTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKEL- 697
K T VD +N + + +SS TMS+ RE+L ++L +IF V S+N+I+ L
Sbjct: 514 KNTGAAGRVDPDANRSKEGTMSSAGTTMSSETRENLPRALLKIFQEKRVRSINSIVSGLR 573
Query: 698 -----------------------KGSINXXXXXXXXXXXXXXXDIHGVYALKSLRNPTLD 808
K + +IHG+Y LKS+ NP LD
Sbjct: 574 DLAISSSSRPRDDPKTKALVNAAKSGADAPLPELQSVISQVAVNIHGLYVLKSMGNPALD 633
Query: 809 PLRKFFIDLFRKKNANVKFKEQDVRRAAHNFLKRNISDSEFKQVVHELCISKGGGLSLKT 988
PLR IDLFR K N K K+Q++ +AA LKRNI+DSE+ QVV+ELC+S G L++
Sbjct: 634 PLRNVVIDLFRGKEPNAKLKKQEICKAAEFRLKRNITDSEYNQVVNELCVSSKGAWVLRS 693
Query: 989 AD 994
D
Sbjct: 694 DD 695
>ref|XP_010906545.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2
[Elaeis guineensis]
Length = 701
Score = 271 bits (694), Expect = 1e-79
Identities = 165/362 (45%), Positives = 218/362 (60%), Gaps = 33/362 (9%)
Frame = +2
Query: 8 GPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWV 187
GP RRVLLSMPLEERL KWL+E QVN F +L++LAP +S +DVLK+LQ HA LVQGLWV
Sbjct: 346 GPPRRVLLSMPLEERLNKWLTECSQVNHFDALMYLAPTNSEKDVLKLLQLHAYLVQGLWV 405
Query: 188 SKSSLRCDGVLARARDYILYQFMKSPVIHYDKH---RPPPPFFKQILVQLAIQRPTLNDW 358
+KSSL +G A ARD+IL+ F K+PVIH DK R P K IL LA++R +DW
Sbjct: 406 TKSSLLYEGFNALARDHILFLFSKNPVIHSDKLKTLRSAP--LKHILSTLAVERSVFSDW 463
Query: 359 KFKESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNPHLL 538
KFKE D+SF+K+YP+IVKEQE +WS R EQ M +L G+ + SL+P+++
Sbjct: 464 KFKEPTDISFLKRYPDIVKEQECAWSSREEQFMDNLRRFGRNIHMMTKN----SLSPNIM 519
Query: 539 KKT-----VDLGSNGANK-IVSSTEMTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKEL- 697
K T VD +N + + +SS TMS+ RE+L ++L +IF V S+N+I+ L
Sbjct: 520 KNTGAAGRVDPDANRSKEGTMSSAGTTMSSETRENLPRALLKIFQEKRVRSINSIVSGLR 579
Query: 698 -----------------------KGSINXXXXXXXXXXXXXXXDIHGVYALKSLRNPTLD 808
K + +IHG+Y LKS+ NP LD
Sbjct: 580 DLAISSSSRPRDDPKTKALVNAAKSGADAPLPELQSVISQVAVNIHGLYVLKSMGNPALD 639
Query: 809 PLRKFFIDLFRKKNANVKFKEQDVRRAAHNFLKRNISDSEFKQVVHELCISKGGGLSLKT 988
PLR IDLFR K N K K+Q++ +AA LKRNI+DSE+ QVV+ELC+S G L++
Sbjct: 640 PLRNVVIDLFRGKEPNAKLKKQEICKAAEFRLKRNITDSEYNQVVNELCVSSKGAWVLRS 699
Query: 989 AD 994
D
Sbjct: 700 DD 701
>ref|XP_010906544.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
[Elaeis guineensis]
Length = 702
Score = 271 bits (694), Expect = 1e-79
Identities = 165/362 (45%), Positives = 218/362 (60%), Gaps = 33/362 (9%)
Frame = +2
Query: 8 GPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWV 187
GP RRVLLSMPLEERL KWL+E QVN F +L++LAP +S +DVLK+LQ HA LVQGLWV
Sbjct: 347 GPPRRVLLSMPLEERLNKWLTECSQVNHFDALMYLAPTNSEKDVLKLLQLHAYLVQGLWV 406
Query: 188 SKSSLRCDGVLARARDYILYQFMKSPVIHYDKH---RPPPPFFKQILVQLAIQRPTLNDW 358
+KSSL +G A ARD+IL+ F K+PVIH DK R P K IL LA++R +DW
Sbjct: 407 TKSSLLYEGFNALARDHILFLFSKNPVIHSDKLKTLRSAP--LKHILSTLAVERSVFSDW 464
Query: 359 KFKESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNPHLL 538
KFKE D+SF+K+YP+IVKEQE +WS R EQ M +L G+ + SL+P+++
Sbjct: 465 KFKEPTDISFLKRYPDIVKEQECAWSSREEQFMDNLRRFGRNIHMMTKN----SLSPNIM 520
Query: 539 KKT-----VDLGSNGANK-IVSSTEMTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKEL- 697
K T VD +N + + +SS TMS+ RE+L ++L +IF V S+N+I+ L
Sbjct: 521 KNTGAAGRVDPDANRSKEGTMSSAGTTMSSETRENLPRALLKIFQEKRVRSINSIVSGLR 580
Query: 698 -----------------------KGSINXXXXXXXXXXXXXXXDIHGVYALKSLRNPTLD 808
K + +IHG+Y LKS+ NP LD
Sbjct: 581 DLAISSSSRPRDDPKTKALVNAAKSGADAPLPELQSVISQVAVNIHGLYVLKSMGNPALD 640
Query: 809 PLRKFFIDLFRKKNANVKFKEQDVRRAAHNFLKRNISDSEFKQVVHELCISKGGGLSLKT 988
PLR IDLFR K N K K+Q++ +AA LKRNI+DSE+ QVV+ELC+S G L++
Sbjct: 641 PLRNVVIDLFRGKEPNAKLKKQEICKAAEFRLKRNITDSEYNQVVNELCVSSKGAWVLRS 700
Query: 989 AD 994
D
Sbjct: 701 DD 702
>ref|XP_009392124.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Musa
acuminata subsp. malaccensis]
Length = 672
Score = 251 bits (642), Expect = 2e-72
Identities = 152/359 (42%), Positives = 205/359 (57%), Gaps = 30/359 (8%)
Frame = +2
Query: 8 GPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWV 187
GPSRR+LL++PLEERLKKWLSEG Q+NRF +L+HLAP+ S EDVL L +A LVQGLWV
Sbjct: 323 GPSRRLLLTLPLEERLKKWLSEGCQINRFDALMHLAPDSSKEDVLNALPLYAVLVQGLWV 382
Query: 188 SKSSLRCDGVLARARDYILYQFMKSPVIHYDKHRPPP-PFFKQILVQLAIQRPTLNDWKF 364
SKS+L +G +A RD+IL F ++P+IH DK + K ++ LA++R +DWKF
Sbjct: 383 SKSTLLYEGKVALVRDFILCLFSRNPIIHLDKLKMIKFDGLKSLMSSLAVERRAFSDWKF 442
Query: 365 KESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNPHLLKK 544
KE+ D SFIK+YP+IVK QE WS + +L G K+ M SLNP K+
Sbjct: 443 KEATDFSFIKKYPDIVKNQECVWS----DIEKTLPGFCKS-----MPMSKSSLNPSSSKR 493
Query: 545 TVDLGSNG-----ANKIVSSTEMTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKEL---- 697
+ + ++ VS+ +MS+ +E L K+L +IF + SLN+++ L
Sbjct: 494 VTSVKVDADAHVVKDRAVSTAVTSMSSETQEHLPKALLKIFQEKRIRSLNSVVHGLRELA 553
Query: 698 --------------------KGSINXXXXXXXXXXXXXXXDIHGVYALKSLRNPTLDPLR 817
K + ++HGVY LKS NP LDPLR
Sbjct: 554 ISKSFRPRDDSKIKALISAAKSGASAPASELQSIVSQIAMNVHGVYVLKSTGNPALDPLR 613
Query: 818 KFFIDLFRKKNANVKFKEQDVRRAAHNFLKRNISDSEFKQVVHELCISKGGGLSLKTAD 994
IDLFR K N K +Q++R AA LK++ISDSE+ QVVHELC+S G LK+ D
Sbjct: 614 NVVIDLFRGKEPNAKINKQEIRIAAQTRLKKDISDSEYNQVVHELCVSSRGSWILKSGD 672
>gb|OVA04539.1| DNA-directed RNA polymerase III subunit Rpc5 [Macleaya cordata]
Length = 646
Score = 244 bits (623), Expect = 7e-70
Identities = 156/363 (42%), Positives = 206/363 (56%), Gaps = 30/363 (8%)
Frame = +2
Query: 8 GPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWV 187
GPSRR LS+PLEER K WLSEGP VNRF +L HLAP+DS E VL VLQ HADLVQGLWV
Sbjct: 291 GPSRRFFLSLPLEERFKTWLSEGPHVNRFNALKHLAPDDSNEIVLGVLQHHADLVQGLWV 350
Query: 188 SKSS-LRCDGVLARARDYILYQFMKSPVIH---YDKHRPPPPFFKQILVQLAIQRPTLND 355
SKSS L+ GV A RDY+L F K+ +I+ D P K++L+ LA+ RPT D
Sbjct: 351 SKSSLLQHKGVEALTRDYVLLLFRKNALINQKKLDDSGLPKDVLKRVLIPLAVYRPTFKD 410
Query: 356 WKFKESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNPHL 535
WKFKE DL+FIK + +IV+EQE W R +++M ++ G G++ + SL P
Sbjct: 411 WKFKEPTDLAFIKDHADIVQEQEKLWGIREKKVMETV-GPGRSGPVR------NSLRPST 463
Query: 536 LKKTVDLG--SNGANKIVSST--EMTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKELKG 703
K+ G GA K V+ T +TMS+ RE L K+L E+ H V SL I + L+
Sbjct: 464 ATKSAASGKADQGAKKNVNGTPSTVTMSDETREALPKALEELLRRHKVCSLQLIRQGLRD 523
Query: 704 ---------------------SINXXXXXXXXXXXXXXXDIHGVYALKSLRNPTLDPLRK 820
+ +IHGVY K+ NPTL+PLR
Sbjct: 524 LAVSKSALPKLHPKAAVAAGYGADAPPSELQSVISQVAINIHGVYVSKTSENPTLNPLRS 583
Query: 821 FFIDLFRKKNANVKFKEQDVRRAAHNFLKRNISDSEFKQVVHELCIS-KGGGLSLKTADS 997
I+LF K N K K+ D+ AA LKR+IS++E+ QVV+E+C+S +G LK+ D
Sbjct: 584 VVINLFSGKEPNAKLKKADIVEAAKIILKRDISNAEYNQVVNEICVSVRGNSWVLKSGDG 643
Query: 998 DQK 1006
++K
Sbjct: 644 NEK 646
>ref|XP_010254912.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Nelumbo
nucifera]
Length = 680
Score = 223 bits (568), Expect = 1e-61
Identities = 141/355 (39%), Positives = 191/355 (53%), Gaps = 26/355 (7%)
Frame = +2
Query: 8 GPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWV 187
GPSRR LLS+PLEER K +LS+G QV RF +L H AP+ S ED+L VLQ +ADLVQGLWV
Sbjct: 329 GPSRRFLLSLPLEERFKIFLSKGTQVYRFTALKHFAPDKSDEDLLAVLQGYADLVQGLWV 388
Query: 188 SKSSLRCDGVLARARDYILYQFMKSPVIHYDKHRP---PPPFFKQILVQLAIQRPTLNDW 358
+KS+L C+GV A ARDY+L F K P+I Y+K K++L LAI+RP+ DW
Sbjct: 389 TKSALLCEGVQALARDYVLLCFSKGPLISYEKLNETGLSRDILKRVLNSLAIERPSFKDW 448
Query: 359 KFKESADLSFIKQYPNIVKEQEFSWSGR---VEQLMASLYGAGKTKETQVMDTLVKSLNP 529
KFKE D+ F K +P+IV+EQ+ W R ++ LM G T + + + S N
Sbjct: 449 KFKEPTDMLFTKNFPDIVREQQHRWEIREKKIKDLMHRPVKGGPTMKQNITNRPRTSSNA 508
Query: 530 HLLKKTVDLGSNGANKIVSSTEMTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKELKG-- 703
K G+ G + TMS+ RE L K+L E+F +H V SL I + L+
Sbjct: 509 DQSAKVNVNGTLGCGTV------TMSDETREALPKALRELFRIHKVCSLQLICQGLRDLA 562
Query: 704 -----------------SINXXXXXXXXXXXXXXXDIHGVYALKSL-RNPTLDPLRKFFI 829
++ ++HGVY LKS +P LDPLR I
Sbjct: 563 VSKNNKAHARAAVAAAQGVSAPLPELQAVIDQVAINVHGVYVLKSSEEHPELDPLRNVVI 622
Query: 830 DLFRKKNANVKFKEQDVRRAAHNFLKRNISDSEFKQVVHELCISKGGGLSLKTAD 994
+LF K N K +++ AA L+R I+ +E +V ELCIS+ LK+ D
Sbjct: 623 NLFCAKGPNACLKREEIFEAAKIALERTITPNELMKVTSELCISRSNAWFLKSGD 677
>gb|PKA54102.1| hypothetical protein AXF42_Ash018112 [Apostasia shenzhenica]
Length = 511
Score = 214 bits (546), Expect = 6e-60
Identities = 140/355 (39%), Positives = 183/355 (51%), Gaps = 27/355 (7%)
Frame = +2
Query: 11 PSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWVS 190
P R LL MPLE RLKKW SE QVNRF +L+HL S +D+LKVL A LVQG+WV
Sbjct: 157 PLIRSLLGMPLEARLKKWFSEVSQVNRFDTLIHLIHGHSEDDLLKVLHPLAYLVQGVWVC 216
Query: 191 KSSLRCDGVLARARDYILYQFMKSPVIHYDKHRP---PPPFFKQILVQLAIQRPTLNDWK 361
KSS+ C G A RD+IL F K+ I + K + P +L LA R L DWK
Sbjct: 217 KSSVLCSGDEAIQRDFILLLFTKANTISHRKLKELKLNPVALNSLLSGLAYNREILGDWK 276
Query: 362 FKESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNPHLLK 541
FKE ADLSFIK+YP +V+EQ +WS + + S++ K + ++ +
Sbjct: 277 FKEPADLSFIKRYPRVVQEQRDAWSSLEKLTLESIHKLVKKIPQTARASPALNVKRTSTR 336
Query: 542 KTVDLGSNGANKIVSSTEMTMSNGFREDLIKSLSEIFHLHGVLSLNAI------------ 685
K + + + SS TMS+ RE L K+L EIF+ V S+ +I
Sbjct: 337 KVEPVTNKSRDVKGSSAVQTMSSETREHLPKALLEIFNAQKVRSVASIRRGLREMALYRS 396
Query: 686 ------------IKELKGSINXXXXXXXXXXXXXXXDIHGVYALKSLRNPTLDPLRKFFI 829
IK + DIHG Y LKS NP LDPLR I
Sbjct: 397 SRPKEDPRSELLIKAASNGASASEHDLLSVIGQVTVDIHGAYVLKSSGNPVLDPLRDVVI 456
Query: 830 DLFRKKNANVKFKEQDVRRAAHNFLKRNISDSEFKQVVHELCISKGGGLSLKTAD 994
+LFR K N K ++Q+++ A + LKR I+DSE QVV+ELCIS G L LK+ +
Sbjct: 457 NLFRGKQPNSKLRKQEIKTALQSSLKREITDSECNQVVNELCISSKGELELKSGE 511
>ref|XP_021847883.1| DNA-directed RNA polymerase III subunit RPC5 [Spinacia oleracea]
gb|KNA22786.1| hypothetical protein SOVF_031230 [Spinacia oleracea]
Length = 663
Score = 216 bits (549), Expect = 5e-59
Identities = 136/360 (37%), Positives = 186/360 (51%), Gaps = 27/360 (7%)
Frame = +2
Query: 8 GPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWV 187
GPSRR LLS+PLEERLK WL EGP V RF ++ HLAP+D +EDVL++LQ++A LVQGLWV
Sbjct: 316 GPSRRSLLSLPLEERLKTWLVEGPSVQRFNAIKHLAPDDPVEDVLEILQKYACLVQGLWV 375
Query: 188 SKSSLRCD---GVLARARDYILYQFMKSPVI---HYDKHRPPPPFFKQILVQLAIQRPTL 349
SKSS+R G RDY L F +SPVI D K +L ++A++RP
Sbjct: 376 SKSSIRHPTGKGPEVLVRDYALLLFSQSPVIKDSELDILGSQKSTGKVVLREIAVERPNC 435
Query: 350 NDWKFKESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNP 529
DWKFKE D+SFIK YP++V++Q W R + ++ + G LN
Sbjct: 436 KDWKFKEPTDVSFIKLYPDVVEQQLKLWQDREQVILQRIMGRRP------------KLNR 483
Query: 530 HLLKKTVDLGSNGANKIVSSTEMTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKELKG-- 703
D GS A + S ++MS +E L K L ++F H V S I + L+
Sbjct: 484 PGSSMQSDEGSVKATNVARSASISMSKETQEALPKILKKLFQSHKVCSFQTICQGLRDMA 543
Query: 704 -------------------SINXXXXXXXXXXXXXXXDIHGVYALKSLRNPTLDPLRKFF 826
++ ++HGVY LKS +P D LRK
Sbjct: 544 VSMSALPKTDGRAAVAAAKGVDAPQEELQAAICEIAYNVHGVYVLKSSEHPEFDSLRKLV 603
Query: 827 IDLFRKKNANVKFKEQDVRRAAHNFLKRNISDSEFKQVVHELCISKGGGLSLKTADSDQK 1006
IDLF N K K+ + AA L++ ++SEF++V+ E+C+SKGG LK+ D K
Sbjct: 604 IDLFLGSGPNAKLKKGEFMEAAKIRLQKEPTNSEFQKVITEMCVSKGGAWVLKSGDGVPK 663
>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X4
[Vitis vinifera]
Length = 672
Score = 213 bits (543), Expect = 4e-58
Identities = 141/364 (38%), Positives = 186/364 (51%), Gaps = 31/364 (8%)
Frame = +2
Query: 8 GPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWV 187
G SRR LLSMPLEER K L EGP V+RF++L H AP++S+EDVL VL +HA LVQGLWV
Sbjct: 314 GLSRRFLLSMPLEERFKTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWV 373
Query: 188 SKSSLRC---DGVLARARDYILYQFMKSPVIHYDKHRPPPPF---FKQILVQLAIQRPTL 349
KSSL GV ARDYIL F K P+I+Y + P K L LA++RP+
Sbjct: 374 PKSSLLFPGGQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSF 433
Query: 350 NDWKFKESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNP 529
DWKFKE D+SF+K +P+IV+EQ W +Q+ ++G G+ S P
Sbjct: 434 RDWKFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRG-----PVTKNSGKP 488
Query: 530 HLLKKT-VDLGSNGANKIVSSTEM---TMSNGFREDLIKSLSEIFHLHGVLSLNAIIKEL 697
+ KT S+GA + + T + MS RE L K+L E+F LH V S I + L
Sbjct: 489 SIANKTGTSTKSDGATRATNGTPVRRTAMSAETREALPKALEEVFRLHKVCSFQLICQAL 548
Query: 698 KG---------------------SINXXXXXXXXXXXXXXXDIHGVYALKSLRNPTLDPL 814
+ + +HGVY K+ + +PL
Sbjct: 549 RDLAVSKSTSPKVDPRTFVAAAYGADAPQEELHAIISKYATTVHGVYVWKTSEHSEHNPL 608
Query: 815 RKFFIDLFRKKNANVKFKEQDVRRAAHNFLKRNISDSEFKQVVHELCISKGGGLSLKTAD 994
RK +DLF K N K K D+ AA LK+ I+ E+ +VV ELC S+G LK+ D
Sbjct: 609 RKVVVDLFCGKEPNAKLKRADIMEAAKIALKKEITTHEYNKVVSELCESRGSLWVLKSGD 668
Query: 995 SDQK 1006
K
Sbjct: 669 GKPK 672
>ref|XP_010649170.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2
[Vitis vinifera]
emb|CBI17549.3| unnamed protein product, partial [Vitis vinifera]
Length = 688
Score = 213 bits (543), Expect = 5e-58
Identities = 141/364 (38%), Positives = 186/364 (51%), Gaps = 31/364 (8%)
Frame = +2
Query: 8 GPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWV 187
G SRR LLSMPLEER K L EGP V+RF++L H AP++S+EDVL VL +HA LVQGLWV
Sbjct: 330 GLSRRFLLSMPLEERFKTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWV 389
Query: 188 SKSSLRC---DGVLARARDYILYQFMKSPVIHYDKHRPPPPF---FKQILVQLAIQRPTL 349
KSSL GV ARDYIL F K P+I+Y + P K L LA++RP+
Sbjct: 390 PKSSLLFPGGQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSF 449
Query: 350 NDWKFKESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNP 529
DWKFKE D+SF+K +P+IV+EQ W +Q+ ++G G+ S P
Sbjct: 450 RDWKFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRG-----PVTKNSGKP 504
Query: 530 HLLKKT-VDLGSNGANKIVSSTEM---TMSNGFREDLIKSLSEIFHLHGVLSLNAIIKEL 697
+ KT S+GA + + T + MS RE L K+L E+F LH V S I + L
Sbjct: 505 SIANKTGTSTKSDGATRATNGTPVRRTAMSAETREALPKALEEVFRLHKVCSFQLICQAL 564
Query: 698 KG---------------------SINXXXXXXXXXXXXXXXDIHGVYALKSLRNPTLDPL 814
+ + +HGVY K+ + +PL
Sbjct: 565 RDLAVSKSTSPKVDPRTFVAAAYGADAPQEELHAIISKYATTVHGVYVWKTSEHSEHNPL 624
Query: 815 RKFFIDLFRKKNANVKFKEQDVRRAAHNFLKRNISDSEFKQVVHELCISKGGGLSLKTAD 994
RK +DLF K N K K D+ AA LK+ I+ E+ +VV ELC S+G LK+ D
Sbjct: 625 RKVVVDLFCGKEPNAKLKRADIMEAAKIALKKEITTHEYNKVVSELCESRGSLWVLKSGD 684
Query: 995 SDQK 1006
K
Sbjct: 685 GKPK 688
>emb|CDP02819.1| unnamed protein product [Coffea canephora]
Length = 687
Score = 211 bits (536), Expect = 5e-57
Identities = 134/361 (37%), Positives = 189/361 (52%), Gaps = 28/361 (7%)
Frame = +2
Query: 8 GPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWV 187
GPSRRVLLS+PLEER + WL +GP ++RF +L HLAP+ S+ED+L VL QHA LVQGLW+
Sbjct: 329 GPSRRVLLSLPLEERFRTWLLQGPPIHRFDALKHLAPDASVEDILAVLSQHAQLVQGLWI 388
Query: 188 SKSSL---RCDGVLARARDYILYQFMKSPVIH---YDKHRPPPPFFKQILVQLAIQRPTL 349
KSSL + G+ A ARDY+L F ++P+I+ + + + +L +A +R +L
Sbjct: 389 PKSSLLYGKDQGIDALARDYVLLLFSRTPIINNSQLPQQQKLNRAMRDVLNTVAFERASL 448
Query: 350 NDWKFKESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNP 529
NDWKFKE D++FIK IV+EQE +W + + ++G T+ + + NP
Sbjct: 449 NDWKFKEPPDMTFIKLNSKIVREQEQTWERLEKLITEKIFGDKNRPATKNSSRPLTTNNP 508
Query: 530 HLLKKTVDLGSNGANKIVSSTEMTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKELK--- 700
K SN N V MS RE L K+L ++F H V S I + L+
Sbjct: 509 ATSKSLSKHASNSLNAGV--PRRPMSEETREALPKALQKLFQSHKVCSFQQICQRLREMA 566
Query: 701 ------------------GSINXXXXXXXXXXXXXXXDIHGVYALKSLR-NPTLDPLRKF 823
+ +IHGVY LKS +P D RK
Sbjct: 567 VSESSRPKGFAREAIAAAHGVEAPPEELQAIISQVAINIHGVYVLKSSPVHPEHDEFRKV 626
Query: 824 FIDLFRKKNANVKFKEQDVRRAAHNFLKRNISDSEFKQVVHELCISKGGGLSLKTADSDQ 1003
IDLF + N K K+ + AA LKR+I+ E+++VV ELC+S+G LK+ D +
Sbjct: 627 VIDLFIAEGPNAKLKKASMIEAAKLQLKRDINSLEYQKVVQELCVSQGSAWVLKSGDGNP 686
Query: 1004 K 1006
K
Sbjct: 687 K 687