BLASTX nr result

ID: Ophiopogon25_contig00012409 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00012409
         (443 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020266362.1| LOW QUALITY PROTEIN: uncharacterized protein...    69   7e-11

>ref|XP_020266362.1| LOW QUALITY PROTEIN: uncharacterized protein LOC109841836
           [Asparagus officinalis]
          Length = 619

 Score = 69.3 bits (168), Expect = 7e-11
 Identities = 35/43 (81%), Positives = 39/43 (90%), Gaps = 1/43 (2%)
 Frame = -3

Query: 423 HNLGALIESTMDGNKGIITQTPQHVRAVQS-HQNSLIQAQAAQ 298
           +NLG LIEST DGNKGIITQTPQ +RAVQS HQN+L+QAQAAQ
Sbjct: 405 NNLGGLIESTKDGNKGIITQTPQQIRAVQSQHQNALLQAQAAQ 447


Top