BLASTX nr result

ID: Ophiopogon25_contig00012219 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00012219
         (549 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020261259.1| replication factor C subunit 3-like [Asparag...    66   3e-09
gb|ONK72191.1| uncharacterized protein A4U43_C04F16720 [Asparagu...    66   3e-09

>ref|XP_020261259.1| replication factor C subunit 3-like [Asparagus officinalis]
          Length = 462

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 36/69 (52%), Positives = 45/69 (65%)
 Frame = -2

Query: 251 LIFELKKLLDKQFHDKIDAMYQEYRIRDSGPIMSREKS*ASSLDRQEDSSDKSSDQRRNV 72
           L+ ELKK +  QFH KIDAMYQEY++  +G   S E      L  QE S DKS DQR+NV
Sbjct: 375 LVCELKKQVINQFHGKIDAMYQEYKLHVTGSNSSLEN---VGLYSQEVSGDKSHDQRKNV 431

Query: 71  QYFMRIKGY 45
            YFM+I+ +
Sbjct: 432 HYFMKIEEF 440


>gb|ONK72191.1| uncharacterized protein A4U43_C04F16720 [Asparagus officinalis]
          Length = 531

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 36/69 (52%), Positives = 45/69 (65%)
 Frame = -2

Query: 251 LIFELKKLLDKQFHDKIDAMYQEYRIRDSGPIMSREKS*ASSLDRQEDSSDKSSDQRRNV 72
           L+ ELKK +  QFH KIDAMYQEY++  +G   S E      L  QE S DKS DQR+NV
Sbjct: 444 LVCELKKQVINQFHGKIDAMYQEYKLHVTGSNSSLEN---VGLYSQEVSGDKSHDQRKNV 500

Query: 71  QYFMRIKGY 45
            YFM+I+ +
Sbjct: 501 HYFMKIEEF 509


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