BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00012134
         (673 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020274285.1| LOW QUALITY PROTEIN: putative RNA polymerase...   152   1e-45
gb|ONK63108.1| uncharacterized protein A4U43_C07F11500 [Asparagu...   152   1e-45
ref|XP_008781193.1| PREDICTED: LOW QUALITY PROTEIN: putative RNA...    90   2e-27
ref|XP_009389521.1| PREDICTED: putative RNA polymerase II subuni...    84   4e-26
ref|XP_010921352.1| PREDICTED: putative RNA polymerase II subuni...    82   1e-25
ref|XP_020581624.1| putative RNA polymerase II subunit B1 CTD ph...    81   1e-23
gb|PKU82998.1| Putative RNA polymerase II subunit B1 CTD phospha...    73   8e-22
ref|XP_020672864.1| putative RNA polymerase II subunit B1 CTD ph...    73   8e-22
ref|XP_020672866.1| putative RNA polymerase II subunit B1 CTD ph...    73   8e-22
gb|OAY73545.1| putative RNA polymerase II subunit B1 CTD phospha...    65   1e-20
ref|XP_020087323.1| putative RNA polymerase II subunit B1 CTD ph...    64   3e-20
ref|XP_020087324.1| putative RNA polymerase II subunit B1 CTD ph...    64   3e-20
sp|A2Y040.1|RPAP2_ORYSI RecName: Full=Putative RNA polymerase II...    64   3e-20
ref|XP_015640837.1| PREDICTED: putative RNA polymerase II subuni...    64   1e-19
ref|XP_020672867.1| putative RNA polymerase II subunit B1 CTD ph...    73   1e-19
gb|PKA54703.1| Putative RNA polymerase II subunit B1 CTD phospha...    60   4e-18
ref|XP_006654013.1| PREDICTED: putative RNA polymerase II subuni...    63   2e-17
ref|XP_004960407.1| putative RNA polymerase II subunit B1 CTD ph...    61   9e-17
ref|XP_002440538.1| putative RNA polymerase II subunit B1 CTD ph...    60   3e-16
gb|OQU77343.1| hypothetical protein SORBI_3009G032500 [Sorghum b...    60   3e-16

>ref|XP_020274285.1| LOW QUALITY PROTEIN: putative RNA polymerase II subunit B1 CTD
           phosphatase RPAP2 homolog [Asparagus officinalis]
          Length = 736

 Score =  152 bits (383), Expect(2) = 1e-45
 Identities = 93/193 (48%), Positives = 108/193 (55%)
 Frame = -2

Query: 672 DKLDFQSIVIIGDXXXXXXXXXXXXXXXXXXXXSAKESEDNAHIKNKAESTSHVESVDVM 493
           DK+DFQS +I GD                     + +   N H+KNK E   + ES DVM
Sbjct: 349 DKIDFQSTIITGDLVNVTSGTSSTSSLDS-----SSKDSVNVHVKNKTEPLGYGESDDVM 403

Query: 492 CWEGANSEKKEVSHKTGLKPSLKTSRSKRGNRSVKRANERNNEALEDKKDTPQVMQEEDS 313
              G + EKK VS +  LK SLKTSRSK GNRSVK A+E   E LEDKKDTPQVM+EED 
Sbjct: 404 LSGGVSMEKKHVSQENELKSSLKTSRSKGGNRSVKWADEVILEVLEDKKDTPQVMREEDL 463

Query: 312 DTSLQYTSXXXXXXXXXXXXXXXXXXXXXXXXXVSETGIVILPQPQYGEGVDSQANEEAF 133
           D+SL+  S                         VSE GIVILPQPQY E  +S+A+EEA 
Sbjct: 464 DSSLRLASAEACAAALSHAASAAASGDVDAGDAVSEAGIVILPQPQYCEDRESEADEEAC 523

Query: 132 EIDQGVLKWPMKT 94
           E DQGVLKWP KT
Sbjct: 524 EFDQGVLKWPTKT 536



 Score = 60.1 bits (144), Expect(2) = 1e-45
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 95  LLLDTDMFDVEDSWHDTPPEGFSLILSSFAT 3
           +LLDTD+F+VEDSWHDTPPEGFSL LS FAT
Sbjct: 537 VLLDTDVFEVEDSWHDTPPEGFSLTLSPFAT 567


>gb|ONK63108.1| uncharacterized protein A4U43_C07F11500 [Asparagus officinalis]
          Length = 705

 Score =  152 bits (383), Expect(2) = 1e-45
 Identities = 93/193 (48%), Positives = 108/193 (55%)
 Frame = -2

Query: 672 DKLDFQSIVIIGDXXXXXXXXXXXXXXXXXXXXSAKESEDNAHIKNKAESTSHVESVDVM 493
           DK+DFQS +I GD                     + +   N H+KNK E   + ES DVM
Sbjct: 318 DKIDFQSTIITGDLVNVTSGTSSTSSLDS-----SSKDSVNVHVKNKTEPLGYGESDDVM 372

Query: 492 CWEGANSEKKEVSHKTGLKPSLKTSRSKRGNRSVKRANERNNEALEDKKDTPQVMQEEDS 313
              G + EKK VS +  LK SLKTSRSK GNRSVK A+E   E LEDKKDTPQVM+EED 
Sbjct: 373 LSGGVSMEKKHVSQENELKSSLKTSRSKGGNRSVKWADEVILEVLEDKKDTPQVMREEDL 432

Query: 312 DTSLQYTSXXXXXXXXXXXXXXXXXXXXXXXXXVSETGIVILPQPQYGEGVDSQANEEAF 133
           D+SL+  S                         VSE GIVILPQPQY E  +S+A+EEA 
Sbjct: 433 DSSLRLASAEACAAALSHAASAAASGDVDAGDAVSEAGIVILPQPQYCEDRESEADEEAC 492

Query: 132 EIDQGVLKWPMKT 94
           E DQGVLKWP KT
Sbjct: 493 EFDQGVLKWPTKT 505



 Score = 60.1 bits (144), Expect(2) = 1e-45
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 95  LLLDTDMFDVEDSWHDTPPEGFSLILSSFAT 3
           +LLDTD+F+VEDSWHDTPPEGFSL LS FAT
Sbjct: 506 VLLDTDVFEVEDSWHDTPPEGFSLTLSPFAT 536


>ref|XP_008781193.1| PREDICTED: LOW QUALITY PROTEIN: putative RNA polymerase II subunit
           B1 CTD phosphatase RPAP2 homolog [Phoenix dactylifera]
          Length = 689

 Score = 89.7 bits (221), Expect(2) = 2e-27
 Identities = 57/163 (34%), Positives = 84/163 (51%), Gaps = 6/163 (3%)
 Frame = -2

Query: 564 ESEDNAHIKNKAESTSHVESVDVMCWEGANSEKKEVSHKTGLKPSLKTSRSKRGNRSVKR 385
           E  DN ++ N+    + +E ++    E     K E   +T LK SLK S SK G R+VK 
Sbjct: 328 EQLDN-NLNNEVHLENEIEYLETAQKELKYRVKLEKKEETALKSSLKASGSKVGRRTVKW 386

Query: 384 ANERNNEALEDKKDTPQ------VMQEEDSDTSLQYTSXXXXXXXXXXXXXXXXXXXXXX 223
           A+E  ++ALE++KD P+         E+D D+SL+  S                      
Sbjct: 387 ADEEKDKALEERKDGPESNISTGASHEDDDDSSLRLASAEACAAALTQAAESVASGLSET 446

Query: 222 XXXVSETGIVILPQPQYGEGVDSQANEEAFEIDQGVLKWPMKT 94
              VSET IVILPQPQY +  D++ +E+ F+ D+G ++WP KT
Sbjct: 447 GDAVSETEIVILPQPQYAKEGDAEEDEDTFDFDRGFVQWPKKT 489



 Score = 61.2 bits (147), Expect(2) = 2e-27
 Identities = 27/31 (87%), Positives = 29/31 (93%)
 Frame = -3

Query: 95  LLLDTDMFDVEDSWHDTPPEGFSLILSSFAT 3
           +LLDTDMF+VEDSWHDTPPE FSL LSSFAT
Sbjct: 490 VLLDTDMFEVEDSWHDTPPESFSLTLSSFAT 520


>ref|XP_009389521.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
           RPAP2 homolog [Musa acuminata subsp. malaccensis]
          Length = 668

 Score = 84.0 bits (206), Expect(2) = 4e-26
 Identities = 60/161 (37%), Positives = 79/161 (49%), Gaps = 7/161 (4%)
 Frame = -2

Query: 555 DNAHIKNKAESTSHVESVDVMCWEGANSEKKEVSHKTG-LKPSLKTSRSKRGNRSVKRAN 379
           D   + ++ +S  H+ES           EKK    K   LK SLKTSRSK   RSVK A+
Sbjct: 313 DKESLISELDSGIHMESTTGSQKVAYEFEKKVSMDKGSVLKSSLKTSRSKNAGRSVKWAD 372

Query: 378 ERNNEALEDKKDT------PQVMQEEDSDTSLQYTSXXXXXXXXXXXXXXXXXXXXXXXX 217
           ER N A E++KD       P+  Q ED D+SL++ S                        
Sbjct: 373 ERENMAQEERKDDLKSSTKPEESQVED-DSSLRFASAEACAAALTQAAEAVASGIAEAGD 431

Query: 216 XVSETGIVILPQPQYGEGVDSQANEEAFEIDQGVLKWPMKT 94
             SE GIVILPQP+  +  D + +E+ FE D+G +KWP KT
Sbjct: 432 AASEAGIVILPQPKRVDEGDVEEDEDTFEFDRGYVKWPKKT 472



 Score = 62.8 bits (151), Expect(2) = 4e-26
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = -3

Query: 95  LLLDTDMFDVEDSWHDTPPEGFSLILSSFAT 3
           +LLDTDMFDVEDSWHDTPPEGF L LSSFAT
Sbjct: 473 VLLDTDMFDVEDSWHDTPPEGFDLKLSSFAT 503


>ref|XP_010921352.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
           RPAP2 homolog [Elaeis guineensis]
          Length = 681

 Score = 81.6 bits (200), Expect(2) = 1e-25
 Identities = 54/160 (33%), Positives = 82/160 (51%), Gaps = 6/160 (3%)
 Frame = -2

Query: 555 DNAHIKNKAESTSHVESVDVMCWEGANSEKKEVSHKTGLKPSLKTSRSKRGNRSVKRANE 376
           +  H++N+ ES   +E       +    EKKE    T LK SLK + SK G ++VK A+ 
Sbjct: 329 NEVHLENELES---LEIAQKELKDRVKMEKKE----TALKSSLKAAGSKVGRQTVKWADM 381

Query: 375 RNNEALEDKKDTPQ------VMQEEDSDTSLQYTSXXXXXXXXXXXXXXXXXXXXXXXXX 214
             ++A E++KD P+       +  +D  +SL++ S                         
Sbjct: 382 EKDKAPEERKDGPEGNISTGALHGDDDGSSLRFASAEACAAALTQAAESVASGLSEAGDA 441

Query: 213 VSETGIVILPQPQYGEGVDSQANEEAFEIDQGVLKWPMKT 94
           VSE GIVILPQPQ+ +  D++A+E+ FE D+G +KWP KT
Sbjct: 442 VSEAGIVILPQPQHVKEGDAEADEDTFEFDRGFVKWPQKT 481



 Score = 63.5 bits (153), Expect(2) = 1e-25
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = -3

Query: 95  LLLDTDMFDVEDSWHDTPPEGFSLILSSFAT 3
           +LLDTDMF+VEDSWHDTPPEGFSL LSSFAT
Sbjct: 482 VLLDTDMFEVEDSWHDTPPEGFSLTLSSFAT 512


>ref|XP_020581624.1| putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
           [Phalaenopsis equestris]
          Length = 721

 Score = 80.9 bits (198), Expect(2) = 1e-23
 Identities = 48/128 (37%), Positives = 70/128 (54%)
 Frame = -2

Query: 477 NSEKKEVSHKTGLKPSLKTSRSKRGNRSVKRANERNNEALEDKKDTPQVMQEEDSDTSLQ 298
           +SEKK +S +  LK  LKTS S+ G+ SVK A+E+   + EDK  TPQ   EE  D+S++
Sbjct: 399 SSEKKTISEEKLLKSCLKTSGSRVGDHSVKCADEKKTVSFEDKMTTPQESFEEYFDSSMR 458

Query: 297 YTSXXXXXXXXXXXXXXXXXXXXXXXXXVSETGIVILPQPQYGEGVDSQANEEAFEIDQG 118
           + S                         VSE G++ILPQ +   G + + +E+ FE D+G
Sbjct: 459 FASAEVCAAALAQAAESVASGKAKVGDAVSEAGVLILPQSESLHG-EREKDEDIFEFDRG 517

Query: 117 VLKWPMKT 94
           ++KWP KT
Sbjct: 518 IVKWPKKT 525



 Score = 57.4 bits (137), Expect(2) = 1e-23
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = -3

Query: 95  LLLDTDMFDVEDSWHDTPPEGFSLILSSFAT 3
           +LLDTD+FDVEDSWHDTPPEGF L LS FA+
Sbjct: 526 VLLDTDVFDVEDSWHDTPPEGFCLNLSPFAS 556


>gb|PKU82998.1| Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 like
           [Dendrobium catenatum]
          Length = 723

 Score = 73.2 bits (178), Expect(2) = 8e-22
 Identities = 48/128 (37%), Positives = 65/128 (50%)
 Frame = -2

Query: 477 NSEKKEVSHKTGLKPSLKTSRSKRGNRSVKRANERNNEALEDKKDTPQVMQEEDSDTSLQ 298
           +S KKE+S +  LK  LK S S+ G+  VK A+E+ N + EDK   PQ   EE  D+S++
Sbjct: 401 SSAKKEISKEKLLKSCLKNSGSRVGDHYVKWADEKRNASFEDKMTIPQESSEELFDSSVR 460

Query: 297 YTSXXXXXXXXXXXXXXXXXXXXXXXXXVSETGIVILPQPQYGEGVDSQANEEAFEIDQG 118
             S                         V E GI+ILPQ Q  EG +   +E  F+ DQG
Sbjct: 461 IASAEVCAVALTQAAESVVSGKAEVGDAVLEAGILILPQLQCLEG-ERVDDENIFKFDQG 519

Query: 117 VLKWPMKT 94
           ++KWP KT
Sbjct: 520 IVKWPKKT 527



 Score = 58.9 bits (141), Expect(2) = 8e-22
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 95  LLLDTDMFDVEDSWHDTPPEGFSLILSSFAT 3
           +LLDT+MF+VEDSWHDTPPEGFSL LS FAT
Sbjct: 528 VLLDTNMFEVEDSWHDTPPEGFSLNLSPFAT 558


>ref|XP_020672864.1| putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
           isoform X1 [Dendrobium catenatum]
          Length = 723

 Score = 73.2 bits (178), Expect(2) = 8e-22
 Identities = 48/128 (37%), Positives = 65/128 (50%)
 Frame = -2

Query: 477 NSEKKEVSHKTGLKPSLKTSRSKRGNRSVKRANERNNEALEDKKDTPQVMQEEDSDTSLQ 298
           +S KKE+S +  LK  LK S S+ G+  VK A+E+ N + EDK   PQ   EE  D+S++
Sbjct: 401 SSAKKEISKEKLLKSCLKNSGSRVGDHYVKWADEKRNASFEDKMTIPQESSEELFDSSVR 460

Query: 297 YTSXXXXXXXXXXXXXXXXXXXXXXXXXVSETGIVILPQPQYGEGVDSQANEEAFEIDQG 118
             S                         V E GI+ILPQ Q  EG +   +E  F+ DQG
Sbjct: 461 IASAEVCAVALTQAAESVVSGKAEVGDAVLEAGILILPQLQCLEG-ERVDDENIFKFDQG 519

Query: 117 VLKWPMKT 94
           ++KWP KT
Sbjct: 520 IVKWPKKT 527



 Score = 58.9 bits (141), Expect(2) = 8e-22
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 95  LLLDTDMFDVEDSWHDTPPEGFSLILSSFAT 3
           +LLDT+MF+VEDSWHDTPPEGFSL LS FAT
Sbjct: 528 VLLDTNMFEVEDSWHDTPPEGFSLNLSPFAT 558


>ref|XP_020672866.1| putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
           isoform X2 [Dendrobium catenatum]
          Length = 704

 Score = 73.2 bits (178), Expect(2) = 8e-22
 Identities = 48/128 (37%), Positives = 65/128 (50%)
 Frame = -2

Query: 477 NSEKKEVSHKTGLKPSLKTSRSKRGNRSVKRANERNNEALEDKKDTPQVMQEEDSDTSLQ 298
           +S KKE+S +  LK  LK S S+ G+  VK A+E+ N + EDK   PQ   EE  D+S++
Sbjct: 401 SSAKKEISKEKLLKSCLKNSGSRVGDHYVKWADEKRNASFEDKMTIPQESSEELFDSSVR 460

Query: 297 YTSXXXXXXXXXXXXXXXXXXXXXXXXXVSETGIVILPQPQYGEGVDSQANEEAFEIDQG 118
             S                         V E GI+ILPQ Q  EG +   +E  F+ DQG
Sbjct: 461 IASAEVCAVALTQAAESVVSGKAEVGDAVLEAGILILPQLQCLEG-ERVDDENIFKFDQG 519

Query: 117 VLKWPMKT 94
           ++KWP KT
Sbjct: 520 IVKWPKKT 527



 Score = 58.9 bits (141), Expect(2) = 8e-22
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 95  LLLDTDMFDVEDSWHDTPPEGFSLILSSFAT 3
           +LLDT+MF+VEDSWHDTPPEGFSL LS FAT
Sbjct: 528 VLLDTNMFEVEDSWHDTPPEGFSLNLSPFAT 558


>gb|OAY73545.1| putative RNA polymerase II subunit B1 CTD phosphatase RPAP, partial
           [Ananas comosus]
          Length = 708

 Score = 65.5 bits (158), Expect(2) = 1e-20
 Identities = 46/136 (33%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
 Frame = -2

Query: 483 GANSEKKEVSHKTGLKPSLKTSRSKRGNRSVKRANERNNEALEDKKDTPQ------VMQE 322
           G +S +K++     L+ SLKT  SK    SVK A+E    +  ++K T +      V  E
Sbjct: 381 GIDSREKKIP---ALRSSLKTKGSKTRRNSVKWADEVTTASGMERKGTHEGSTNSHVSSE 437

Query: 321 EDSDTSLQYTSXXXXXXXXXXXXXXXXXXXXXXXXXVSETGIVILPQPQYGEGVDSQANE 142
            D   SL+  S                         VSE GIV+LPQPQ+ +G   +  E
Sbjct: 438 GDDGDSLRLASAEACAAALTWAAEAVTSGTSEVEDAVSEAGIVLLPQPQHVDGRGGEEGE 497

Query: 141 EAFEIDQGVLKWPMKT 94
           + FE D+GV+KWP KT
Sbjct: 498 DNFEFDRGVVKWPKKT 513



 Score = 62.8 bits (151), Expect(2) = 1e-20
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = -3

Query: 95  LLLDTDMFDVEDSWHDTPPEGFSLILSSFAT 3
           ++LDTDMF+VEDSWHDTPPEGFSL LSSFAT
Sbjct: 514 VILDTDMFEVEDSWHDTPPEGFSLTLSSFAT 544


>ref|XP_020087323.1| putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
           isoform X1 [Ananas comosus]
          Length = 673

 Score = 64.3 bits (155), Expect(2) = 3e-20
 Identities = 45/136 (33%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
 Frame = -2

Query: 483 GANSEKKEVSHKTGLKPSLKTSRSKRGNRSVKRANERNNEALEDKKDTPQ------VMQE 322
           G +S +K++     L+ SLKT  SK    SVK A+E    +  ++K   +      V  E
Sbjct: 346 GIDSREKKIP---ALRSSLKTKGSKNRRNSVKWADEVTTASGMERKGAHEGSTNSHVSSE 402

Query: 321 EDSDTSLQYTSXXXXXXXXXXXXXXXXXXXXXXXXXVSETGIVILPQPQYGEGVDSQANE 142
            D   SL+  S                         VSE GIV+LPQPQ+ +G   +  E
Sbjct: 403 GDDGASLRLASAEACAAALTWAAEAVTSGTSEVEDAVSEAGIVLLPQPQHVDGRGGEEGE 462

Query: 141 EAFEIDQGVLKWPMKT 94
           + FE D+GV+KWP KT
Sbjct: 463 DNFEFDRGVVKWPKKT 478



 Score = 62.8 bits (151), Expect(2) = 3e-20
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = -3

Query: 95  LLLDTDMFDVEDSWHDTPPEGFSLILSSFAT 3
           ++LDTDMF+VEDSWHDTPPEGFSL LSSFAT
Sbjct: 479 VILDTDMFEVEDSWHDTPPEGFSLTLSSFAT 509


>ref|XP_020087324.1| putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
           isoform X2 [Ananas comosus]
          Length = 607

 Score = 64.3 bits (155), Expect(2) = 3e-20
 Identities = 45/136 (33%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
 Frame = -2

Query: 483 GANSEKKEVSHKTGLKPSLKTSRSKRGNRSVKRANERNNEALEDKKDTPQ------VMQE 322
           G +S +K++     L+ SLKT  SK    SVK A+E    +  ++K   +      V  E
Sbjct: 346 GIDSREKKIP---ALRSSLKTKGSKNRRNSVKWADEVTTASGMERKGAHEGSTNSHVSSE 402

Query: 321 EDSDTSLQYTSXXXXXXXXXXXXXXXXXXXXXXXXXVSETGIVILPQPQYGEGVDSQANE 142
            D   SL+  S                         VSE GIV+LPQPQ+ +G   +  E
Sbjct: 403 GDDGASLRLASAEACAAALTWAAEAVTSGTSEVEDAVSEAGIVLLPQPQHVDGRGGEEGE 462

Query: 141 EAFEIDQGVLKWPMKT 94
           + FE D+GV+KWP KT
Sbjct: 463 DNFEFDRGVVKWPKKT 478



 Score = 62.8 bits (151), Expect(2) = 3e-20
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = -3

Query: 95  LLLDTDMFDVEDSWHDTPPEGFSLILSSFAT 3
           ++LDTDMF+VEDSWHDTPPEGFSL LSSFAT
Sbjct: 479 VILDTDMFEVEDSWHDTPPEGFSLTLSSFAT 509


>sp|A2Y040.1|RPAP2_ORYSI RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase
           RPAP2 homolog; AltName: Full=RNA polymerase
           II-associated protein 2 homolog
 gb|EAY96450.1| hypothetical protein OsI_18345 [Oryza sativa Indica Group]
          Length = 726

 Score = 63.9 bits (154), Expect(2) = 3e-20
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = -3

Query: 95  LLLDTDMFDVEDSWHDTPPEGFSLILSSFAT 3
           +LLDTDMFDV+DSWHDTPPEGFSL LSSFAT
Sbjct: 528 VLLDTDMFDVDDSWHDTPPEGFSLTLSSFAT 558



 Score = 62.8 bits (151), Expect(2) = 3e-20
 Identities = 57/204 (27%), Positives = 82/204 (40%), Gaps = 12/204 (5%)
 Frame = -2

Query: 669 KLDFQSIVIIGDXXXXXXXXXXXXXXXXXXXXSAKESEDNAHIKNKAESTSHVESVDVMC 490
           ++DF S +I+GD                     A E   ++         ++ E +D + 
Sbjct: 325 EVDFTSTIIMGDHGSEMMDHGALGQYNFSSSILANEQPSSSQYAAIDSVQAYTEELDELF 384

Query: 489 WEGANSEKKEVSHKTG---LKPSLKTSRSKRGNRSVKRANERNNEALEDKKD--TPQVMQ 325
               N  K E S  +G   L+ SLK   SK   RSVK A+E N   LE  +   +     
Sbjct: 385 SNAVNIAKDETSDDSGRCTLRSSLKAVGSKNAGRSVKWADE-NGSVLETSRAFVSHSSKS 443

Query: 324 EEDSDTSLQYTSXXXXXXXXXXXXXXXXXXXXXXXXXVSETGIVILP----QPQYGEGVD 157
           +E  D+S++  S                         VS+ GI+ILP    Q QY    D
Sbjct: 444 QESMDSSVRRESAEACAAALIEAAEAISSGTSEVEDAVSKAGIIILPDMVNQQQYNNDYD 503

Query: 156 SQAN---EEAFEIDQGVLKWPMKT 94
           +  +    E FEID+GV+KWP KT
Sbjct: 504 NDKDAGENEIFEIDRGVVKWPKKT 527


>ref|XP_015640837.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
           RPAP2 homolog [Oryza sativa Japonica Group]
 sp|Q6AVZ9.1|RPAP2_ORYSJ RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase
           RPAP2 homolog; AltName: Full=RNA polymerase
           II-associated protein 2 homolog
 gb|AAT94046.1| unknown protein [Oryza sativa Japonica Group]
 gb|EEE62232.1| hypothetical protein OsJ_17019 [Oryza sativa Japonica Group]
 dbj|BAS92137.1| Os05g0134300 [Oryza sativa Japonica Group]
          Length = 726

 Score = 63.9 bits (154), Expect(2) = 1e-19
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = -3

Query: 95  LLLDTDMFDVEDSWHDTPPEGFSLILSSFAT 3
           +LLDTDMFDV+DSWHDTPPEGFSL LSSFAT
Sbjct: 528 VLLDTDMFDVDDSWHDTPPEGFSLTLSSFAT 558



 Score = 60.8 bits (146), Expect(2) = 1e-19
 Identities = 56/204 (27%), Positives = 81/204 (39%), Gaps = 12/204 (5%)
 Frame = -2

Query: 669 KLDFQSIVIIGDXXXXXXXXXXXXXXXXXXXXSAKESEDNAHIKNKAESTSHVESVDVMC 490
           ++DF S +I+GD                     A E   ++         ++ E +D + 
Sbjct: 325 EVDFTSTIIMGDRGSEMMDHGALGQYNFSSSILANEQPSSSQYAAIDSVQAYTEELDELF 384

Query: 489 WEGANSEKKEVSHKTG---LKPSLKTSRSKRGNRSVKRANERNNEALEDKKD--TPQVMQ 325
               N  K E S  +G   L+ SLK   SK    SVK A+E N   LE  +   +     
Sbjct: 385 SNAVNIAKDETSDDSGRCTLRSSLKAVGSKNAGHSVKWADE-NGSVLETSRAFVSHSSKS 443

Query: 324 EEDSDTSLQYTSXXXXXXXXXXXXXXXXXXXXXXXXXVSETGIVILP----QPQYGEGVD 157
           +E  D+S++  S                         VS+ GI+ILP    Q QY    D
Sbjct: 444 QESMDSSVRRESAEACAAALIEAAEAISSGTSEVEDAVSKAGIIILPDMVNQQQYNNDYD 503

Query: 156 SQAN---EEAFEIDQGVLKWPMKT 94
           +  +    E FEID+GV+KWP KT
Sbjct: 504 NDKDAGENEIFEIDRGVVKWPKKT 527


>ref|XP_020672867.1| putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
           isoform X3 [Dendrobium catenatum]
          Length = 635

 Score = 73.2 bits (178), Expect(2) = 1e-19
 Identities = 48/128 (37%), Positives = 65/128 (50%)
 Frame = -2

Query: 477 NSEKKEVSHKTGLKPSLKTSRSKRGNRSVKRANERNNEALEDKKDTPQVMQEEDSDTSLQ 298
           +S KKE+S +  LK  LK S S+ G+  VK A+E+ N + EDK   PQ   EE  D+S++
Sbjct: 401 SSAKKEISKEKLLKSCLKNSGSRVGDHYVKWADEKRNASFEDKMTIPQESSEELFDSSVR 460

Query: 297 YTSXXXXXXXXXXXXXXXXXXXXXXXXXVSETGIVILPQPQYGEGVDSQANEEAFEIDQG 118
             S                         V E GI+ILPQ Q  EG +   +E  F+ DQG
Sbjct: 461 IASAEVCAVALTQAAESVVSGKAEVGDAVLEAGILILPQLQCLEG-ERVDDENIFKFDQG 519

Query: 117 VLKWPMKT 94
           ++KWP KT
Sbjct: 520 IVKWPKKT 527



 Score = 51.6 bits (122), Expect(2) = 1e-19
 Identities = 21/24 (87%), Positives = 24/24 (100%)
 Frame = -3

Query: 95  LLLDTDMFDVEDSWHDTPPEGFSL 24
           +LLDT+MF+VEDSWHDTPPEGFSL
Sbjct: 528 VLLDTNMFEVEDSWHDTPPEGFSL 551


>gb|PKA54703.1| Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 like
           [Apostasia shenzhenica]
          Length = 817

 Score = 60.5 bits (145), Expect(2) = 4e-18
 Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 3/161 (1%)
 Frame = -2

Query: 567 KESEDNAHIKNKAESTSH--VESVDVMCWEGANS-EKKEVSHKTGLKPSLKTSRSKRGNR 397
           KE E+ A  K+   S S      V V  ++G  S E+   S +   K SLKTS+S+ G+R
Sbjct: 461 KEIEETAIYKSLVPSGSKKACSQVSVEEFDGVISLERNTASEEKQRKSSLKTSQSRDGHR 520

Query: 396 SVKRANERNNEALEDKKDTPQVMQEEDSDTSLQYTSXXXXXXXXXXXXXXXXXXXXXXXX 217
           SVK A+E     +EDK+   + +  ED+  S+++ S                        
Sbjct: 521 SVKWADENEIGTVEDKRFIQESL--EDTGDSIRFASAEACAAALAEASASVASGKAEVED 578

Query: 216 XVSETGIVILPQPQYGEGVDSQANEEAFEIDQGVLKWPMKT 94
            V +  I+ILPQ Q  +  + + +++ FE D+G++KWP KT
Sbjct: 579 AVLKADILILPQLQPVQR-EMKEDDDFFEFDRGIVKWPTKT 618



 Score = 59.3 bits (142), Expect(2) = 4e-18
 Identities = 25/31 (80%), Positives = 29/31 (93%)
 Frame = -3

Query: 95  LLLDTDMFDVEDSWHDTPPEGFSLILSSFAT 3
           +LLDTDMF++EDSWHDTPPEGF+L LS FAT
Sbjct: 619 VLLDTDMFEIEDSWHDTPPEGFNLNLSPFAT 649


>ref|XP_006654013.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
           RPAP2 homolog, partial [Oryza brachyantha]
          Length = 660

 Score = 62.8 bits (151), Expect(2) = 2e-17
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = -3

Query: 95  LLLDTDMFDVEDSWHDTPPEGFSLILSSFAT 3
           +LLDTDMFDV+DSWHDTPPEGFSL LS+FAT
Sbjct: 462 VLLDTDMFDVDDSWHDTPPEGFSLTLSTFAT 492



 Score = 54.3 bits (129), Expect(2) = 2e-17
 Identities = 50/206 (24%), Positives = 78/206 (37%), Gaps = 14/206 (6%)
 Frame = -2

Query: 669 KLDFQSIVIIGDXXXXXXXXXXXXXXXXXXXXSAKESEDNAHIKNKAESTSHVESVDVMC 490
           ++DF S +I+GD                       E   ++         ++ E +  + 
Sbjct: 256 EVDFTSTIIMGDHDSGKMDHGSVGQYNFSSSILTNEQPSSSQYSAIDLVQAYTEELHEVF 315

Query: 489 WEGANSEKKEVSHKTG---LKPSLKTSRSKRGNRSVKRANERNN----EALEDKKDTPQV 331
               N  K E    +G   +K SLKT  SK    SV  A+E+ +      + D   +   
Sbjct: 316 SNAVNIAKDETGDDSGRLAIKSSLKTVGSKNARHSVTWADEKGSVLEASRVFDSHSSDDK 375

Query: 330 MQEEDSDTSLQYTSXXXXXXXXXXXXXXXXXXXXXXXXXVSETGIVILP----QPQYGEG 163
             +E  D+S++  S                         VS+ GI+I+P    Q QY   
Sbjct: 376 QSQEGMDSSIRRASAEACAAALIEAAEAISSGTSEVDDAVSKAGIIIVPDMVNQKQYNND 435

Query: 162 VDSQAN---EEAFEIDQGVLKWPMKT 94
            D+  +    E FEID+GV+KWP KT
Sbjct: 436 YDNDKDAGENEIFEIDRGVVKWPKKT 461


>ref|XP_004960407.1| putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
           [Setaria italica]
 gb|KQL13231.1| hypothetical protein SETIT_021318mg [Setaria italica]
          Length = 739

 Score = 60.8 bits (146), Expect(2) = 9e-17
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = -3

Query: 95  LLLDTDMFDVEDSWHDTPPEGFSLILSSFAT 3
           +LLDTDMF+V+DSWHDTPPEGFSL LS FAT
Sbjct: 543 VLLDTDMFEVDDSWHDTPPEGFSLTLSGFAT 573



 Score = 54.3 bits (129), Expect(2) = 9e-17
 Identities = 59/204 (28%), Positives = 79/204 (38%), Gaps = 12/204 (5%)
 Frame = -2

Query: 669 KLDFQSIVIIGDXXXXXXXXXXXXXXXXXXXXSAKESEDNAHIKNKAESTSHVESVDVMC 490
           ++DF S +IIGD                           ++    K     + E +    
Sbjct: 341 EVDFTSTIIIGDASTNMEQGTMNQYNYFSSSILTDNYASSSQSGAKGPMQGYAEQLYREF 400

Query: 489 WEGANSEKKEVSH---KTGLKPSLKTSRSKRGNRSVKRANERNNEALEDKK--DTPQV-- 331
            E  +  K E S    K  LK S+K   SK G++SV  A+E N   LE  K  ++P    
Sbjct: 401 SEAVSIGKDETSDEKMKPALKSSMKAPGSKSGSQSVTWADE-NGSVLETSKLYESPSSSI 459

Query: 330 -MQEEDSDTSLQYTSXXXXXXXXXXXXXXXXXXXXXXXXXVSETGIVILPQP----QYGE 166
              EE  D SL+  S                         VS+ GI+ILP      QY  
Sbjct: 460 KQSEEGMDISLRRASAEACAAAFIEAAEAISSGTSEVDDAVSKAGIIILPDTLHPKQYSN 519

Query: 165 GVDSQANEEAFEIDQGVLKWPMKT 94
              S A+EE+ EID+ VLKWP KT
Sbjct: 520 EKSSGADEES-EIDRDVLKWPKKT 542


>ref|XP_002440538.1| putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
           [Sorghum bicolor]
          Length = 746

 Score = 59.7 bits (143), Expect(2) = 3e-16
 Identities = 25/31 (80%), Positives = 29/31 (93%)
 Frame = -3

Query: 95  LLLDTDMFDVEDSWHDTPPEGFSLILSSFAT 3
           +LLDTDMF+V+DSWHDTPPEGFSL LS+F T
Sbjct: 550 VLLDTDMFEVDDSWHDTPPEGFSLTLSAFGT 580



 Score = 53.5 bits (127), Expect(2) = 3e-16
 Identities = 53/203 (26%), Positives = 82/203 (40%), Gaps = 12/203 (5%)
 Frame = -2

Query: 669 KLDFQSIVIIGDXXXXXXXXXXXXXXXXXXXXSAKESEDNAHIKNKAESTSHVESVDVMC 490
           ++DF S +IIGD                           ++    K  + ++ E +    
Sbjct: 348 EVDFTSTIIIGDASTNREESAMNQYNYLSSSVLVDNHPSSSQSSAKDSTQAYAEQLCEEF 407

Query: 489 WEGAN---SEKKEVSHKTGLKPSLKTSRSKRGNRSVKRANERNNEALEDKK--DTPQ--- 334
            E  N    E  +   +  LKPSLK + SK G +SV  A+E N   LE  K  ++P    
Sbjct: 408 SEAVNIGNDETTDEKMRPALKPSLKVTGSKSGRQSVTWADE-NGSVLETSKAYESPSSSI 466

Query: 333 VMQEEDSDTSLQYTSXXXXXXXXXXXXXXXXXXXXXXXXXVSETGIVILP----QPQYGE 166
               E  D+SL+  S                         VS+ GI+ILP    Q +YG+
Sbjct: 467 KQPNEGIDSSLRRASAEACAAALIEAAEAISSGTAETEDAVSKAGIIILPDMLNQKEYGD 526

Query: 165 GVDSQANEEAFEIDQGVLKWPMK 97
             ++  +++  EID+ V+KWP K
Sbjct: 527 AKNNGGDDDP-EIDRDVIKWPKK 548


>gb|OQU77343.1| hypothetical protein SORBI_3009G032500 [Sorghum bicolor]
          Length = 722

 Score = 59.7 bits (143), Expect(2) = 3e-16
 Identities = 25/31 (80%), Positives = 29/31 (93%)
 Frame = -3

Query: 95  LLLDTDMFDVEDSWHDTPPEGFSLILSSFAT 3
           +LLDTDMF+V+DSWHDTPPEGFSL LS+F T
Sbjct: 526 VLLDTDMFEVDDSWHDTPPEGFSLTLSAFGT 556



 Score = 53.5 bits (127), Expect(2) = 3e-16
 Identities = 53/203 (26%), Positives = 82/203 (40%), Gaps = 12/203 (5%)
 Frame = -2

Query: 669 KLDFQSIVIIGDXXXXXXXXXXXXXXXXXXXXSAKESEDNAHIKNKAESTSHVESVDVMC 490
           ++DF S +IIGD                           ++    K  + ++ E +    
Sbjct: 324 EVDFTSTIIIGDASTNREESAMNQYNYLSSSVLVDNHPSSSQSSAKDSTQAYAEQLCEEF 383

Query: 489 WEGAN---SEKKEVSHKTGLKPSLKTSRSKRGNRSVKRANERNNEALEDKK--DTPQ--- 334
            E  N    E  +   +  LKPSLK + SK G +SV  A+E N   LE  K  ++P    
Sbjct: 384 SEAVNIGNDETTDEKMRPALKPSLKVTGSKSGRQSVTWADE-NGSVLETSKAYESPSSSI 442

Query: 333 VMQEEDSDTSLQYTSXXXXXXXXXXXXXXXXXXXXXXXXXVSETGIVILP----QPQYGE 166
               E  D+SL+  S                         VS+ GI+ILP    Q +YG+
Sbjct: 443 KQPNEGIDSSLRRASAEACAAALIEAAEAISSGTAETEDAVSKAGIIILPDMLNQKEYGD 502

Query: 165 GVDSQANEEAFEIDQGVLKWPMK 97
             ++  +++  EID+ V+KWP K
Sbjct: 503 AKNNGGDDDP-EIDRDVIKWPKK 524