BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00011829
         (2488 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020270910.1| uncharacterized protein LOC109846096 [Aspara...   125   4e-58
ref|XP_020242946.1| uncharacterized protein LOC109821168 [Aspara...   132   9e-43
ref|XP_020266186.1| uncharacterized protein LOC109841648 [Aspara...   107   3e-39
ref|XP_020257167.1| uncharacterized protein LOC109833769 [Aspara...   114   2e-33
ref|XP_020250446.1| uncharacterized protein LOC109827835 [Aspara...    94   7e-28
ref|XP_020250169.1| uncharacterized protein LOC109827576 [Aspara...   110   5e-26
gb|AAN01245.1| Putative retroelement [Oryza sativa Japonica Grou...    75   2e-25
emb|CAD40058.3| OSJNBa0085C10.10 [Oryza sativa Japonica Group]         74   3e-25
gb|ABF95995.1| retrotransposon protein, putative, Ty3-gypsy subc...    74   4e-25
gb|AAT73680.1| putative polyprotein [Oryza sativa Japonica Group]      74   4e-25
gb|ABA97793.1| retrotransposon protein, putative, Ty3-gypsy subc...    76   4e-25
gb|AAX94880.1| retrotransposon protein, putative, Ty3-gypsy sub-...    74   5e-25
gb|AAS90688.2| putative polyprotein [Oryza sativa Japonica Group]      76   5e-25
gb|AAT73646.1| putative polyprotein [Oryza sativa Japonica Group]      75   5e-25
gb|ABG65986.1| retrotransposon protein, putative, Ty3-gypsy subc...    77   7e-25
gb|AAK51574.1|AC022352_10 Putative retroelement [Oryza sativa Ja...    74   7e-25
gb|ABA99289.1| retrotransposon protein, putative, Ty3-gypsy subc...    74   7e-25
gb|AAM01156.1|AC113336_8 Putative retroelement [Oryza sativa Jap...    74   7e-25
gb|ABA98482.1| retrotransposon protein, putative, Ty3-gypsy subc...    74   1e-24
gb|AAM14686.1|AC097446_15 Putative polyprotein [Oryza sativa Jap...    74   1e-24

>ref|XP_020270910.1| uncharacterized protein LOC109846096 [Asparagus officinalis]
          Length = 583

 Score =  125 bits (315), Expect(4) = 4e-58
 Identities = 73/175 (41%), Positives = 92/175 (52%), Gaps = 1/175 (0%)
 Frame = -1

Query: 880 GLCLSCGFADHLIGECPRNTKLCXXXXXXXXXXXXXXXXXXXXXAEKPPLPGMQRAFNAA 701
           GLCL CG ADH +  CP                           A  P  PG       A
Sbjct: 286 GLCLICGAADHQLTTCPSRR----------------VPGGASGGAIVPRRPGQYD--QQA 327

Query: 700 LRGAGCGQAYNLTTE-AERSNDVVAGKVSVNSVPIMPLFDSGASHCFISSRFVSMHSIHC 524
            +    GQ   LT E A+ S DVV G + V SVP   LFDSGASHCFIS++F++ H+I C
Sbjct: 328 QQQQRQGQVLTLTAEQADTSGDVVTGTILVYSVPAFTLFDSGASHCFISAQFIARHTIPC 387

Query: 523 TKLDNAWKISTDNGVIATNRMCESCTVEVCGRVMHVDMFVLDTQGCNAILGMTWL 359
            KLD +W I T +GV+ ++R C+ C V VCGR +  D+ V+DT   + ILGM WL
Sbjct: 388 DKLDASWNIHTGSGVLTSSRECKKCPVVVCGRELFADLLVIDTNRFDVILGMDWL 442



 Score = 86.3 bits (212), Expect(4) = 4e-58
 Identities = 57/161 (35%), Positives = 86/161 (53%), Gaps = 18/161 (11%)
 Frame = -2

Query: 1320 SYKESFLERFFPKSA*QEMADQFCTLKQYDKFVDAYAAEFIRLSRFAPHMIAEE-KRASR 1144
            +++ESFLE FFPK++  +M  QF  L+Q    VD YAAEF +LSRFAP MI+ E  +  R
Sbjct: 121  TFRESFLETFFPKTSRLDMQRQFAMLRQRANTVDEYAAEFAKLSRFAPGMISNEVDKGQR 180

Query: 1143 FLRDLTWGIQ*KLTAIE-MDTYEQVLKVACRCKSL-----SERRNKEKMN---------Q 1009
            F++ L + IQ ++ + + +DTY  VL+ A + + L     S RR   K +         Q
Sbjct: 181  FMQGLNFEIQTQIYSQKGVDTYADVLEAAQKAEQLIGIMNSVRRGANKRHAGQTSGSNQQ 240

Query: 1008 KP--GKRPVPPAKSNQDQKSAKRTTRFCTFCNMTGHSRNEC 892
            KP  G  P    ++   + + + T   C +C   GH   +C
Sbjct: 241  KPQTGGAPAKRQQTGTSRPAPQPTNMVCHYCKKPGHLMKDC 281



 Score = 43.5 bits (101), Expect(4) = 4e-58
 Identities = 17/22 (77%), Positives = 21/22 (95%)
 Frame = -1

Query: 67  KQIQKYQDKEYIRLSTSPWGAP 2
           KQ+Q+Y DK++IRLSTSPWGAP
Sbjct: 552 KQVQEYLDKQFIRLSTSPWGAP 573



 Score = 42.7 bits (99), Expect(4) = 4e-58
 Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 11/106 (10%)
 Frame = -3

Query: 350 HAVINCRE-NVTFKIPGETEFQFIGEGQTERCSKLISTWQRHKNLFQ-SRRSLRMF*VKF 177
           +A I+CR  +V FKIP   +F+F+   +     +  +  +      +   + +     +F
Sbjct: 446 YATIDCRRRSVVFKIPDHPDFEFMSGSKVMEHPEYRAGVEGVLTCIEVEEKPIPEIVKEF 505

Query: 176 QDCHRSE---------IEFTIDLLPETAPIFKPPHRMTPIELAELK 66
            D   +E         IEF IDL+P  +PI KPP+RM   +L EL+
Sbjct: 506 LDVFPNELPGLPPDRDIEFVIDLIPGVSPISKPPYRMPIADLEELR 551


>ref|XP_020242946.1| uncharacterized protein LOC109821168 [Asparagus officinalis]
          Length = 348

 Score =  132 bits (333), Expect(4) = 9e-43
 Identities = 75/185 (40%), Positives = 96/185 (51%), Gaps = 11/185 (5%)
 Frame = -1

Query: 880 GLCLSCGFADHLIGECPRNTKLCXXXXXXXXXXXXXXXXXXXXXAEKPPLPGMQRAFNAA 701
           GLCL CG ADH +  CP                             +P LP  Q+ F   
Sbjct: 21  GLCLICGAADHQLTTCPSRR---VSGEASGGTIVPAGQARQDVQQRRPALPTQQQMFQNQ 77

Query: 700 LRGAGC----------GQAYNLTTE-AERSNDVVAGKVSVNSVPIMPLFDSGASHCFISS 554
            R +G           GQ   LT E A+ S DVV G + V SVP   LFDSGASHCFIS+
Sbjct: 78  QRRSGQYGQRTQQQRQGQVLTLTAEQADTSGDVVTGTILVYSVPAFTLFDSGASHCFISA 137

Query: 553 RFVSMHSIHCTKLDNAWKISTDNGVIATNRMCESCTVEVCGRVMHVDMFVLDTQGCNAIL 374
           +F+S H+I C +LD +W I T +GV+ + R C+ C + VCGR +  D+ V+DT G + IL
Sbjct: 138 QFISRHTIPCDRLDASWNIHTGSGVLMSCRECKKCPLVVCGRELITDLLVIDTNGFDVIL 197

Query: 373 GMTWL 359
           GM WL
Sbjct: 198 GMDWL 202



 Score = 48.9 bits (115), Expect(4) = 9e-43
 Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
 Frame = -3

Query: 350 HAVINCRE-NVTFKIPGETEFQFIGEGQTERCSKL------ISTWQRHKNLFQSRRSLRM 192
           HA INCR  +V FKIP   EF+F+   +     +       + TW   ++     + +  
Sbjct: 206 HATINCRRRSVVFKIPDHPEFEFMSGSKVMEQPEYRAGVNGVLTWIEVED-----KPIPE 260

Query: 191 F*VKFQDCHRSE---------IEFTIDLLPETAPIFKPPHRMTPIELAELK 66
              +F D    E         IEF IDL+P  API KPP+RM   +L +L+
Sbjct: 261 IIKEFLDVFPDELPGLPPDRDIEFVIDLIPGVAPISKPPYRMPIADLEDLR 311



 Score = 43.1 bits (100), Expect(4) = 9e-43
 Identities = 17/22 (77%), Positives = 21/22 (95%)
 Frame = -1

Query: 67  KQIQKYQDKEYIRLSTSPWGAP 2
           KQ+Q+Y DK++IRLSTSPWGAP
Sbjct: 312 KQVQEYLDKKFIRLSTSPWGAP 333



 Score = 21.6 bits (44), Expect(4) = 9e-43
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = -2

Query: 933 CTFCNMTGHSRNECR 889
           C +C   GH   +CR
Sbjct: 3   CHYCKKPGHLMKDCR 17


>ref|XP_020266186.1| uncharacterized protein LOC109841648 [Asparagus officinalis]
          Length = 1038

 Score =  107 bits (268), Expect(3) = 3e-39
 Identities = 61/180 (33%), Positives = 88/180 (48%), Gaps = 7/180 (3%)
 Frame = -1

Query: 877 LCLSCGFADHLIGECPRNTKLCXXXXXXXXXXXXXXXXXXXXXAEKP------PLPGMQR 716
           LC S G  DH+  +CP+  +                        +        PLP  Q+
Sbjct: 308 LCFSYGSPDHMSQDCPQKQQARLPPPPVRAAPPAPPRPAPAAQPQHRSYPRTGPLPPQQQ 367

Query: 715 AFNAALRGAGCGQAYNLTT-EAERSNDVVAGKVSVNSVPIMPLFDSGASHCFISSRFVSM 539
            +  A       Q + ++  EAE ++ V+ GKV V+SVP + LFDSGASHCF+S RF + 
Sbjct: 368 LYQEAQTQQPPRQTFMMSAVEAEANDQVITGKVLVSSVPALSLFDSGASHCFLSRRFATA 427

Query: 538 HSIHCTKLDNAWKISTDNGVIATNRMCESCTVEVCGRVMHVDMFVLDTQGCNAILGMTWL 359
           HS+  T L   W I+T +GV+  +   ESC V + GR +  D  V+D    +A+ GM WL
Sbjct: 428 HSLPITPLTTGWNINTGSGVLVASSGYESCPVVISGRELFADFLVIDLPSFDAVFGMDWL 487



 Score = 62.4 bits (150), Expect(3) = 3e-39
 Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 36/180 (20%)
 Frame = -2

Query: 1311 ESFLERF----FPKSA*QEMADQFCTLKQYDKFVDAYAAEFIRLSRFAPHMIAEEK-RAS 1147
            E+F++RF    FP+SA  E+  +F  LKQ  + VD Y AEF  LSR+APH++ +   R  
Sbjct: 129  ETFIDRFNRKYFPQSARDELLRKFVELKQGGRSVDEYEAEFSSLSRYAPHLVTDPTIRRH 188

Query: 1146 RFLRDLTWGIQ*KLTAIEMDTYEQVLKVACRCKSLSERRNKEKMNQKPGKRPVPPAKS-- 973
            +F + L   I+  L    + T++ VL  A   +S+ +      + Q   + P  P +S  
Sbjct: 189  QFQKGLDKYIRLALAGRALTTHDAVLDAAREIESVQKEPEDSHLIQS--RTPTAPTRSVE 246

Query: 972  ----NQDQKSAKRTTRF-------------------------CTFCNMTGHSRNECRLKL 880
                 Q Q++ +R                             C++C+  GH++ +C  +L
Sbjct: 247  RLPPRQQQQNPQRQQHSQRQPFHQSHPYQRPGVQTRGQPSVRCSYCSYPGHTQQDCPRRL 306



 Score = 44.3 bits (103), Expect(3) = 3e-39
 Identities = 39/113 (34%), Positives = 54/113 (47%), Gaps = 12/113 (10%)
 Frame = -3

Query: 368 DLVSKNHAVINCRE-NVTFKIPGETEFQFIGEGQTE------RCSKLISTWQRHKNLFQS 210
           D +    A I+CR  +V F+IP    F+F+  G T       R     +T+   +   + 
Sbjct: 485 DWLGSFFATIDCRRRSVVFEIPDHPRFEFL-SGSTSAGPVEYRARPKKATFVAMQVEPEK 543

Query: 209 RRSLRMF*VKFQD-----CHRSEIEFTIDLLPETAPIFKPPHRMTPIELAELK 66
              +R F   F D          IEF+I+L P TAPI K P+RM P ELAEL+
Sbjct: 544 PIVVREFEDVFPDDIYGLPPDRAIEFSIELKPGTAPISKTPYRMPPAELAELR 596


>ref|XP_020257167.1| uncharacterized protein LOC109833769 [Asparagus officinalis]
          Length = 718

 Score =  114 bits (286), Expect(2) = 2e-33
 Identities = 63/180 (35%), Positives = 89/180 (49%), Gaps = 7/180 (3%)
 Frame = -1

Query: 877 LCLSCGFADHLIGECPRN------TKLCXXXXXXXXXXXXXXXXXXXXXAEKPPLPGMQR 716
           LC SCG  DH+  +CP+       T                            PLP  Q+
Sbjct: 309 LCFSCGSPDHISRDCPQKQQARLPTPPVRTTLLAPPRPAPAAQPQHRSYPRAGPLPPQQQ 368

Query: 715 AFNAALRGAGCGQAYNLTT-EAERSNDVVAGKVSVNSVPIMPLFDSGASHCFISSRFVSM 539
            +  A R     Q + ++  EAE ++ V+ GKV V+SVP + LFDSGASHCF+S RF + 
Sbjct: 369 RYQEAHRQQPQRQTFMMSAVEAEANDRVITGKVLVSSVPALSLFDSGASHCFLSRRFANT 428

Query: 538 HSIHCTKLDNAWKISTDNGVIATNRMCESCTVEVCGRVMHVDMFVLDTQGCNAILGMTWL 359
           HS+    L   W I+T +GV+  +   E+C V +CGR +  D  V+D    +A+ GM WL
Sbjct: 429 HSLPIAPLTTGWNINTGSGVLVASSGYEACPVVICGRELFADFLVIDLPSFDAVFGMDWL 488



 Score = 59.7 bits (143), Expect(2) = 2e-33
 Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 32/179 (17%)
 Frame = -2

Query: 1320 SYKESFLERFFPKSA*QEMADQFCTLKQYDKFVDAYAAEFIRLSRFAPHMIAEEK-RASR 1144
            ++ + F  ++FP+SA  E+  +F  LKQ  + VD Y AEF  LSR+APH++ +   R  +
Sbjct: 131  TFTDRFNMKYFPQSARDELLRRFVELKQGSRSVDEYEAEFSSLSRYAPHLVTDPAIRRHQ 190

Query: 1143 FLRDLTWGIQ*KLTAIEMDTYEQVLKVACRCKSLSERRNKEKMNQKPGKRPVPPAKS--- 973
            F + L   I+  L    + T++ VL  A   +S+ +      + Q   + P  PA++   
Sbjct: 191  FQKGLDKYIRMALAGRALATHDAVLDAAREIESVHKEPEDSHVIQS--RTPAAPARNVER 248

Query: 972  ---NQDQKSAKRTTRF-------------------------CTFCNMTGHSRNECRLKL 880
                Q Q+  +R                             C++C+  GH+  +C  +L
Sbjct: 249  PPPRQQQQGPQRQQHSQRQPFPQSHPYQRPGVQTRGQPSVRCSYCSYPGHTLQDCPRRL 307


>ref|XP_020250446.1| uncharacterized protein LOC109827835 [Asparagus officinalis]
          Length = 632

 Score = 94.0 bits (232), Expect(2) = 7e-28
 Identities = 52/157 (33%), Positives = 77/157 (49%), Gaps = 7/157 (4%)
 Frame = -1

Query: 877 LCLSCGFADHLIGECPRNTKLCXXXXXXXXXXXXXXXXXXXXXAEKP------PLPGMQR 716
           LC +CG   H+  +CP+  +                        +        PLP  Q+
Sbjct: 309 LCFTCGSPGHISRDCPQQQQAHLPPPPVRAALPAPPRPVPAAQPQHRSYPRAGPLPPQQQ 368

Query: 715 AFNAALRGAGCGQAYNLTT-EAERSNDVVAGKVSVNSVPIMPLFDSGASHCFISSRFVSM 539
            +  A R     Q + ++  EAE ++ V+ GKV V+SVP + LFDSGASHCF+S RF S 
Sbjct: 369 LYQEAHRQQPQRQMFMMSAVEAEANDQVITGKVLVSSVPALSLFDSGASHCFLSRRFASA 428

Query: 538 HSIHCTKLDNAWKISTDNGVIATNRMCESCTVEVCGR 428
           HS+    L   W I+T +G++  +   E+C V +CGR
Sbjct: 429 HSLPIASLTTGWNINTGSGILVASSGYEACPVVICGR 465



 Score = 61.6 bits (148), Expect(2) = 7e-28
 Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 36/183 (19%)
 Frame = -2

Query: 1320 SYKESFLERFFPKSA*QEMADQFCTLKQYDKFVDAYAAEFIRLSRFAPHMIAEEK-RASR 1144
            ++ + F  ++FP+SA  E+  +F  LKQ  + VD Y AEF  LSR+APH++ +   R  +
Sbjct: 131  TFTDRFNRKYFPQSARDELLRRFVELKQGGRSVDEYEAEFSSLSRYAPHLVTDPTIRKHQ 190

Query: 1143 FLRDLTWGIQ*KLTAIEMDTYEQVLKVACRCKSLSER----------------RNKEKMN 1012
            F + L   I+  L    + T++ VL  A   +S+ +                 RN E+  
Sbjct: 191  FQKGLDKYIRLALAGRALATHDAVLDAAREIESVQKEPEDSHLIQSRTPAAPTRNVERPP 250

Query: 1011 QKPGKRPVP-------------------PAKSNQDQKSAKRTTRFCTFCNMTGHSRNECR 889
            Q+  ++ VP                   P    Q Q S K     CT+C+  GH + +C 
Sbjct: 251  QRQ-QQQVPQRQQHSQRQPIHQAHPYQRPGVQFQSQPSVK-----CTYCSHAGHIQQDCP 304

Query: 888  LKL 880
             +L
Sbjct: 305  RRL 307


>ref|XP_020250169.1| uncharacterized protein LOC109827576 [Asparagus officinalis]
          Length = 239

 Score =  110 bits (275), Expect(3) = 5e-26
 Identities = 49/99 (49%), Positives = 68/99 (68%)
 Frame = -1

Query: 655 AERSNDVVAGKVSVNSVPIMPLFDSGASHCFISSRFVSMHSIHCTKLDNAWKISTDNGVI 476
           A+ S+DVV G + V S+P   LFDSGASHCFIS++F++ H+I C  LD +W I T + V+
Sbjct: 31  ADTSDDVVIGTILVYSIPAFTLFDSGASHCFISAQFIARHTIPCDNLDVSWNIHTSSRVL 90

Query: 475 ATNRMCESCTVEVCGRVMHVDMFVLDTQGCNAILGMTWL 359
            ++R C+ C V VCG  +  D+ V+DT G + ILGM WL
Sbjct: 91  TSSRECKKCPVVVCGMELFADLLVIDTNGFDVILGMDWL 129



 Score = 33.9 bits (76), Expect(3) = 5e-26
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = -3

Query: 158 EIEFTIDLLPETAPIFKPPHRMTPIELAELK 66
           +IEF IDL+P  +PI K P++M   +L EL+
Sbjct: 208 DIEFVIDLIPGVSPISKLPYQMPIADLEELR 238



 Score = 25.0 bits (53), Expect(3) = 5e-26
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -2

Query: 276 RADRKMQQADIHMAEAQESIPVAEEFTDVL-GEVPGLPPKRD 154
           RAD++     I + E  +   + +EF D+   ++PGLPP +D
Sbjct: 168 RADKEGVVTCIEVEEKHKP-EIIKEFLDIFPDDLPGLPPDKD 208


>gb|AAN01245.1| Putative retroelement [Oryza sativa Japonica Group]
 gb|AAP53126.1| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
            [Oryza sativa Japonica Group]
          Length = 1785

 Score = 75.1 bits (183), Expect(4) = 2e-25
 Identities = 42/117 (35%), Positives = 61/117 (52%)
 Frame = -1

Query: 640  DVVAGKVSVNSVPIMPLFDSGASHCFISSRFVSMHSIHCTKLDNAWKISTDNGVIATNRM 461
            DV+ G   V+S+P   LFDSGASH FIS  FV  + +   +L N   I+T  GV+     
Sbjct: 674  DVIVGTFLVHSIPATILFDSGASHSFISVPFVGKNQLGVERLRNPLLITTPGGVMTAKYY 733

Query: 460  CESCTVEVCGRVMHVDMFVLDTQGCNAILGMTWLARTMQLSTVARTLPSRFRAKPNS 290
              +  +E+ G     D+ +LDT+  + ILGM WLA+   +   AR   + +R    S
Sbjct: 734  SPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWLAQFQGVVDCARRTVTLYRGPEQS 790



 Score = 42.0 bits (97), Expect(4) = 2e-25
 Identities = 19/33 (57%), Positives = 24/33 (72%)
 Frame = -3

Query: 164 RSEIEFTIDLLPETAPIFKPPHRMTPIELAELK 66
           + EIEF IDL P T P++K P+RM   ELAE+K
Sbjct: 833 KREIEFRIDLAPGTTPLYKRPYRMAANELAEVK 865



 Score = 35.8 bits (81), Expect(4) = 2e-25
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = -1

Query: 67  KQIQKYQDKEYIRLSTSPWGAP 2
           KQ+++ ++K YIR STSPWGAP
Sbjct: 866 KQLEELKEKGYIRPSTSPWGAP 887



 Score = 34.3 bits (77), Expect(4) = 2e-25
 Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
 Frame = -2

Query: 261 MQQADIHMAEAQESIPVAEEFTDVLGE-VPGLPPKRD 154
           ++ +++H  E  E IP+  EF DV  E +PG+PPKR+
Sbjct: 800 VRSSELHQIELSE-IPIVREFGDVFPEELPGMPPKRE 835


>emb|CAD40058.3| OSJNBa0085C10.10 [Oryza sativa Japonica Group]
          Length = 1785

 Score = 73.9 bits (180), Expect(4) = 3e-25
 Identities = 40/112 (35%), Positives = 60/112 (53%)
 Frame = -1

Query: 640  DVVAGKVSVNSVPIMPLFDSGASHCFISSRFVSMHSIHCTKLDNAWKISTDNGVIATNRM 461
            D++ G   V+S+P   LFDSGASH FIS  FV  + +   +L N   I+T  GV+     
Sbjct: 674  DIIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYY 733

Query: 460  CESCTVEVCGRVMHVDMFVLDTQGCNAILGMTWLARTMQLSTVARTLPSRFR 305
              +  +E+ G     D+ +LDT+  + ILGM WLA+   +   AR   + +R
Sbjct: 734  SPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWLAQFQGVVDCARRTVTLYR 785



 Score = 42.0 bits (97), Expect(4) = 3e-25
 Identities = 19/33 (57%), Positives = 24/33 (72%)
 Frame = -3

Query: 164 RSEIEFTIDLLPETAPIFKPPHRMTPIELAELK 66
           + EIEF IDL P T P++K P+RM   ELAE+K
Sbjct: 833 KREIEFRIDLAPGTTPLYKRPYRMAANELAEVK 865



 Score = 38.5 bits (88), Expect(4) = 3e-25
 Identities = 15/22 (68%), Positives = 20/22 (90%)
 Frame = -1

Query: 67  KQIQKYQDKEYIRLSTSPWGAP 2
           KQ+++ ++KEYIR STSPWGAP
Sbjct: 866 KQLEELKEKEYIRPSTSPWGAP 887



 Score = 32.0 bits (71), Expect(4) = 3e-25
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = -2

Query: 291 PIHWRRADRKMQQADIHMAEAQESIPVAEEFTDVLGE-VPGLPPKRD 154
           P+ +      ++ +++H     E IP+  EF DV  E +PG+PPKR+
Sbjct: 790 PVVFFAPPTSVRSSELHQIGLSE-IPIVREFGDVFPEELPGMPPKRE 835


>gb|ABF95995.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1804

 Score = 74.3 bits (181), Expect(4) = 4e-25
 Identities = 41/112 (36%), Positives = 60/112 (53%)
 Frame = -1

Query: 640  DVVAGKVSVNSVPIMPLFDSGASHCFISSRFVSMHSIHCTKLDNAWKISTDNGVIATNRM 461
            DV+ G   V+S+P   LFDSGASH FIS  FV  + +   +L N   I+T  GV+     
Sbjct: 693  DVIVGTFLVHSIPATILFDSGASHSFISVPFVGKNQLGVERLRNPLLITTPGGVMTAKYY 752

Query: 460  CESCTVEVCGRVMHVDMFVLDTQGCNAILGMTWLARTMQLSTVARTLPSRFR 305
              +  +E+ G     D+ +LDT+  + ILGM WLA+   +   AR   + +R
Sbjct: 753  SPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWLAQFQGVVDCARRTVTLYR 804



 Score = 41.2 bits (95), Expect(4) = 4e-25
 Identities = 19/33 (57%), Positives = 24/33 (72%)
 Frame = -3

Query: 164 RSEIEFTIDLLPETAPIFKPPHRMTPIELAELK 66
           + EIEF IDL+P T P+ K P+RM   ELAE+K
Sbjct: 852 KREIEFRIDLVPGTTPLHKRPYRMAANELAEVK 884



 Score = 35.8 bits (81), Expect(4) = 4e-25
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = -1

Query: 67  KQIQKYQDKEYIRLSTSPWGAP 2
           KQ+++ ++K YIR STSPWGAP
Sbjct: 885 KQLEELKEKGYIRPSTSPWGAP 906



 Score = 34.7 bits (78), Expect(4) = 4e-25
 Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = -2

Query: 291 PIHWRRADRKMQQADIHMAEAQESIPVAEEFTDVLGE-VPGLPPKRD 154
           P+ +      ++ +++H  E  E IP+  EF DV  E +PG+PPKR+
Sbjct: 809 PVVFFAPPTSVRSSELHQIELSE-IPIVREFGDVFPEELPGMPPKRE 854


>gb|AAT73680.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1499

 Score = 73.9 bits (180), Expect(4) = 4e-25
 Identities = 41/112 (36%), Positives = 59/112 (52%)
 Frame = -1

Query: 640 DVVAGKVSVNSVPIMPLFDSGASHCFISSRFVSMHSIHCTKLDNAWKISTDNGVIATNRM 461
           DV+ G   V S+P   LFDSGASH FIS  FV  + +   +L N   I+T  GV+     
Sbjct: 388 DVIVGTFLVQSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYY 447

Query: 460 CESCTVEVCGRVMHVDMFVLDTQGCNAILGMTWLARTMQLSTVARTLPSRFR 305
             +  +E+ G     D+ +LDT+  + ILGM WLA+   +   AR   + +R
Sbjct: 448 SPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWLAQFQGVVDCARRTVTLYR 499



 Score = 42.0 bits (97), Expect(4) = 4e-25
 Identities = 19/33 (57%), Positives = 24/33 (72%)
 Frame = -3

Query: 164 RSEIEFTIDLLPETAPIFKPPHRMTPIELAELK 66
           + EIEF IDL P T P++K P+RM   ELAE+K
Sbjct: 547 KREIEFRIDLAPGTTPLYKRPYRMAANELAEVK 579



 Score = 35.8 bits (81), Expect(4) = 4e-25
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = -1

Query: 67  KQIQKYQDKEYIRLSTSPWGAP 2
           KQ+++ ++K YIR STSPWGAP
Sbjct: 580 KQLEELKEKGYIRPSTSPWGAP 601



 Score = 34.3 bits (77), Expect(4) = 4e-25
 Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
 Frame = -2

Query: 261 MQQADIHMAEAQESIPVAEEFTDVLGE-VPGLPPKRD 154
           ++ +++H  E  E IP+  EF DV  E +PG+PPKR+
Sbjct: 514 VRSSELHQIELSE-IPIVREFGDVFPEELPGMPPKRE 549


>gb|ABA97793.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1435

 Score = 76.3 bits (186), Expect(4) = 4e-25
 Identities = 42/112 (37%), Positives = 61/112 (54%)
 Frame = -1

Query: 640 DVVAGKVSVNSVPIMPLFDSGASHCFISSRFVSMHSIHCTKLDNAWKISTDNGVIATNRM 461
           DV+ G   V+S+P   LFDSGASH FIS  FV  + +   +L N   I+T  GV+ T   
Sbjct: 395 DVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTTKYY 454

Query: 460 CESCTVEVCGRVMHVDMFVLDTQGCNAILGMTWLARTMQLSTVARTLPSRFR 305
             +  +E+ G     D+ +LDT+  + ILGM WLA+   +   AR   + +R
Sbjct: 455 SPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWLAQFQGVVDCARRTVTLYR 506



 Score = 42.0 bits (97), Expect(4) = 4e-25
 Identities = 19/33 (57%), Positives = 24/33 (72%)
 Frame = -3

Query: 164 RSEIEFTIDLLPETAPIFKPPHRMTPIELAELK 66
           + EIEF IDL P T P++K P+RM   ELAE+K
Sbjct: 554 KREIEFRIDLAPGTTPLYKRPYRMAANELAEVK 586



 Score = 35.8 bits (81), Expect(4) = 4e-25
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = -1

Query: 67  KQIQKYQDKEYIRLSTSPWGAP 2
           KQ+++ ++K YIR STSPWGAP
Sbjct: 587 KQLEELKEKGYIRPSTSPWGAP 608



 Score = 32.0 bits (71), Expect(4) = 4e-25
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = -2

Query: 291 PIHWRRADRKMQQADIHMAEAQESIPVAEEFTDVLGE-VPGLPPKRD 154
           P+ +      ++ +++H     E IP+  EF DV  E +PG+PPKR+
Sbjct: 511 PVVFFAPPTSVRSSELHQIGLSE-IPIVREFGDVFPEELPGMPPKRE 556


>gb|AAX94880.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group]
 gb|ABA92248.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1849

 Score = 74.3 bits (181), Expect(4) = 5e-25
 Identities = 41/112 (36%), Positives = 60/112 (53%)
 Frame = -1

Query: 640  DVVAGKVSVNSVPIMPLFDSGASHCFISSRFVSMHSIHCTKLDNAWKISTDNGVIATNRM 461
            DV+ G   V+S+P   LFDSGASH FIS  FV  + +   +L N   I+T  GV+     
Sbjct: 738  DVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYY 797

Query: 460  CESCTVEVCGRVMHVDMFVLDTQGCNAILGMTWLARTMQLSTVARTLPSRFR 305
              +  +E+ G     D+ +LDT+  + ILGM WLA+   +   AR   + +R
Sbjct: 798  SPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWLAQFQGVVDCARRTVTLYR 849



 Score = 42.0 bits (97), Expect(4) = 5e-25
 Identities = 20/41 (48%), Positives = 27/41 (65%)
 Frame = -3

Query: 164  RSEIEFTIDLLPETAPIFKPPHRMTPIELAELKADSKVSRQ 42
            + EIEF IDL P T P+ K P+RM   ELAE+K   +V ++
Sbjct: 897  KREIEFRIDLAPGTTPLHKRPYRMAANELAEVKKQLEVLKE 937



 Score = 34.7 bits (78), Expect(4) = 5e-25
 Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = -2

Query: 291 PIHWRRADRKMQQADIHMAEAQESIPVAEEFTDVLGE-VPGLPPKRD 154
           P+ +      ++ +++H  E  E IP+  EF DV  E +PG+PPKR+
Sbjct: 854 PVVFFAPPTSVRSSELHQIELSE-IPIVREFGDVFPEELPGMPPKRE 899



 Score = 34.7 bits (78), Expect(4) = 5e-25
 Identities = 14/22 (63%), Positives = 18/22 (81%)
 Frame = -1

Query: 67  KQIQKYQDKEYIRLSTSPWGAP 2
           KQ++  ++K YIR STSPWGAP
Sbjct: 930 KQLEVLKEKGYIRPSTSPWGAP 951


>gb|AAS90688.2| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1789

 Score = 75.9 bits (185), Expect(4) = 5e-25
 Identities = 53/192 (27%), Positives = 83/192 (43%), Gaps = 1/192 (0%)
 Frame = -1

Query: 877  LCLSCGFADHLIGECPRNTKLCXXXXXXXXXXXXXXXXXXXXXAEKPPLPGMQRAFNAAL 698
            LC +C    H   +CP+  +                        + PP P      N   
Sbjct: 625  LCFNCFEPGHFADKCPKPRR---------------------QQGQAPPRP------NNGG 657

Query: 697  RGAGCGQAYNLTTEAERSN-DVVAGKVSVNSVPIMPLFDSGASHCFISSRFVSMHSIHCT 521
            +    G+  ++T E   +  DV+ G   ++S+P   LFDSGASH FIS  FV  + +   
Sbjct: 658  KDVSRGRVNHVTAEDVLTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVE 717

Query: 520  KLDNAWKISTDNGVIATNRMCESCTVEVCGRVMHVDMFVLDTQGCNAILGMTWLARTMQL 341
            +L N   I+T  GV+       +  +E+ G     D+ +LDT+  + ILGM WLA+   +
Sbjct: 718  RLRNPLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWLAQFQGV 777

Query: 340  STVARTLPSRFR 305
               AR   + +R
Sbjct: 778  VDCARRTVTLYR 789



 Score = 42.0 bits (97), Expect(4) = 5e-25
 Identities = 19/33 (57%), Positives = 24/33 (72%)
 Frame = -3

Query: 164 RSEIEFTIDLLPETAPIFKPPHRMTPIELAELK 66
           + EIEF IDL P T P++K P+RM   ELAE+K
Sbjct: 837 KREIEFRIDLAPGTTPLYKRPYRMAANELAEVK 869



 Score = 35.8 bits (81), Expect(4) = 5e-25
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = -1

Query: 67  KQIQKYQDKEYIRLSTSPWGAP 2
           KQ+++ ++K YIR STSPWGAP
Sbjct: 870 KQLEELKEKGYIRPSTSPWGAP 891



 Score = 32.0 bits (71), Expect(4) = 5e-25
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = -2

Query: 291 PIHWRRADRKMQQADIHMAEAQESIPVAEEFTDVLGE-VPGLPPKRD 154
           P+ +      ++ +++H     E IP+  EF DV  E +PG+PPKR+
Sbjct: 794 PVVFFAPPTSVRSSELHQIGLSE-IPIVREFGDVFPEELPGMPPKRE 839


>gb|AAT73646.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1764

 Score = 74.7 bits (182), Expect(4) = 5e-25
 Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 1/192 (0%)
 Frame = -1

Query: 877  LCLSCGFADHLIGECPRNTKLCXXXXXXXXXXXXXXXXXXXXXAEKPPLPGMQRAFNAAL 698
            LC +C    H   +CP+  +                        + PP P      N   
Sbjct: 600  LCFNCFEPGHFADKCPKPRR---------------------QQGQAPPRP------NNGG 632

Query: 697  RGAGCGQAYNLTTEAERSN-DVVAGKVSVNSVPIMPLFDSGASHCFISSRFVSMHSIHCT 521
            +    G+  ++T E   +  DV+ G   V+S+P   LFDSGASH FIS  FV  + +   
Sbjct: 633  KDVIRGRVNHVTAEDVLTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGKNQLGVE 692

Query: 520  KLDNAWKISTDNGVIATNRMCESCTVEVCGRVMHVDMFVLDTQGCNAILGMTWLARTMQL 341
            +L N   I+T  GV+       +  +E+ G     D+ +LDT+  + ILGM WLA+   +
Sbjct: 693  RLRNPLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWLAQFQGV 752

Query: 340  STVARTLPSRFR 305
               AR   + +R
Sbjct: 753  VDCARRTVTLYR 764



 Score = 40.4 bits (93), Expect(4) = 5e-25
 Identities = 19/33 (57%), Positives = 23/33 (69%)
 Frame = -3

Query: 164 RSEIEFTIDLLPETAPIFKPPHRMTPIELAELK 66
           + EIEF IDL P T P+ K P+RM   ELAE+K
Sbjct: 812 KREIEFRIDLAPGTTPLHKRPYRMAANELAEVK 844



 Score = 35.8 bits (81), Expect(4) = 5e-25
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = -1

Query: 67  KQIQKYQDKEYIRLSTSPWGAP 2
           KQ+++ ++K YIR STSPWGAP
Sbjct: 845 KQLEELKEKGYIRPSTSPWGAP 866



 Score = 34.7 bits (78), Expect(4) = 5e-25
 Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = -2

Query: 291 PIHWRRADRKMQQADIHMAEAQESIPVAEEFTDVLGE-VPGLPPKRD 154
           P+ +      ++ +++H  E  E IP+  EF DV  E +PG+PPKR+
Sbjct: 769 PVVFFAPPTSVRSSELHQIELSE-IPIVREFGDVFPEELPGMPPKRE 814


>gb|ABG65986.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1840

 Score = 77.0 bits (188), Expect(4) = 7e-25
 Identities = 45/127 (35%), Positives = 68/127 (53%), Gaps = 1/127 (0%)
 Frame = -1

Query: 682  GQAYNLTTEAERSN-DVVAGKVSVNSVPIMPLFDSGASHCFISSRFVSMHSIHCTKLDNA 506
            G+  ++T E E +  DV+ G   V+S+P   LFDSGASH FIS  FV  + +   +L N 
Sbjct: 714  GRVNHVTAEDELTTPDVIVGTFLVHSIPATILFDSGASHSFISVPFVGKNQLGVERLRNP 773

Query: 505  WKISTDNGVIATNRMCESCTVEVCGRVMHVDMFVLDTQGCNAILGMTWLARTMQLSTVAR 326
              I+T  GV+       +  +E+ G     D+ +LDT+  + ILGM WLA+   +   AR
Sbjct: 774  LLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWLAQFQGVVDCAR 833

Query: 325  TLPSRFR 305
               + +R
Sbjct: 834  RTVTLYR 840



 Score = 40.4 bits (93), Expect(4) = 7e-25
 Identities = 19/33 (57%), Positives = 23/33 (69%)
 Frame = -3

Query: 164 RSEIEFTIDLLPETAPIFKPPHRMTPIELAELK 66
           + EIEF IDL P T P+ K P+RM   ELAE+K
Sbjct: 888 KREIEFRIDLAPGTTPLHKRPYRMAANELAEVK 920



 Score = 35.8 bits (81), Expect(4) = 7e-25
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = -1

Query: 67  KQIQKYQDKEYIRLSTSPWGAP 2
           KQ+++ ++K YIR STSPWGAP
Sbjct: 921 KQLEELKEKGYIRPSTSPWGAP 942



 Score = 32.0 bits (71), Expect(4) = 7e-25
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = -2

Query: 291 PIHWRRADRKMQQADIHMAEAQESIPVAEEFTDVLGE-VPGLPPKRD 154
           P+ +      ++ +++H     E IP+  EF DV  E +PG+PPKR+
Sbjct: 845 PVVFFAPPTSVRSSELHQIGLSE-IPIVREFGDVFPEELPGMPPKRE 890


>gb|AAK51574.1|AC022352_10 Putative retroelement [Oryza sativa Japonica Group]
 gb|AAP52842.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1810

 Score = 74.3 bits (181), Expect(4) = 7e-25
 Identities = 41/112 (36%), Positives = 60/112 (53%)
 Frame = -1

Query: 640  DVVAGKVSVNSVPIMPLFDSGASHCFISSRFVSMHSIHCTKLDNAWKISTDNGVIATNRM 461
            DV+ G   V+S+P   LFDSGASH FIS  FV  + +   +L N   I+T  GV+     
Sbjct: 699  DVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYY 758

Query: 460  CESCTVEVCGRVMHVDMFVLDTQGCNAILGMTWLARTMQLSTVARTLPSRFR 305
              +  +E+ G     D+ +LDT+  + ILGM WLA+   +   AR   + +R
Sbjct: 759  SPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWLAQFQGVVDCARRTVTLYR 810



 Score = 40.4 bits (93), Expect(4) = 7e-25
 Identities = 19/33 (57%), Positives = 23/33 (69%)
 Frame = -3

Query: 164 RSEIEFTIDLLPETAPIFKPPHRMTPIELAELK 66
           + EIEF IDL P T P+ K P+RM   ELAE+K
Sbjct: 858 KREIEFRIDLAPGTTPLHKRPYRMAANELAEVK 890



 Score = 35.8 bits (81), Expect(4) = 7e-25
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = -1

Query: 67  KQIQKYQDKEYIRLSTSPWGAP 2
           KQ+++ ++K YIR STSPWGAP
Sbjct: 891 KQLEELKEKGYIRPSTSPWGAP 912



 Score = 34.7 bits (78), Expect(4) = 7e-25
 Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = -2

Query: 291 PIHWRRADRKMQQADIHMAEAQESIPVAEEFTDVLGE-VPGLPPKRD 154
           P+ +      ++ +++H  E  E IP+  EF DV  E +PG+PPKR+
Sbjct: 815 PVVFFAPPTSVRSSELHQIELSE-IPIVREFGDVFPEELPGMPPKRE 860


>gb|ABA99289.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1805

 Score = 74.3 bits (181), Expect(4) = 7e-25
 Identities = 41/112 (36%), Positives = 60/112 (53%)
 Frame = -1

Query: 640  DVVAGKVSVNSVPIMPLFDSGASHCFISSRFVSMHSIHCTKLDNAWKISTDNGVIATNRM 461
            DV+ G   V+S+P   LFDSGASH FIS  FV  + +   +L N   I+T  GV+     
Sbjct: 694  DVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYY 753

Query: 460  CESCTVEVCGRVMHVDMFVLDTQGCNAILGMTWLARTMQLSTVARTLPSRFR 305
              +  +E+ G     D+ +LDT+  + ILGM WLA+   +   AR   + +R
Sbjct: 754  SPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWLAQFQGVVDCARRTVTLYR 805



 Score = 40.4 bits (93), Expect(4) = 7e-25
 Identities = 19/33 (57%), Positives = 23/33 (69%)
 Frame = -3

Query: 164 RSEIEFTIDLLPETAPIFKPPHRMTPIELAELK 66
           + EIEF IDL P T P+ K P+RM   ELAE+K
Sbjct: 853 KREIEFRIDLAPGTTPLHKRPYRMAANELAEVK 885



 Score = 35.8 bits (81), Expect(4) = 7e-25
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = -1

Query: 67  KQIQKYQDKEYIRLSTSPWGAP 2
           KQ+++ ++K YIR STSPWGAP
Sbjct: 886 KQLEELKEKGYIRPSTSPWGAP 907



 Score = 34.7 bits (78), Expect(4) = 7e-25
 Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = -2

Query: 291 PIHWRRADRKMQQADIHMAEAQESIPVAEEFTDVLGE-VPGLPPKRD 154
           P+ +      ++ +++H  E  E IP+  EF DV  E +PG+PPKR+
Sbjct: 810 PVVFFAPPTSVRSSELHQIELSE-IPIVREFGDVFPEELPGMPPKRE 855


>gb|AAM01156.1|AC113336_8 Putative retroelement [Oryza sativa Japonica Group]
 gb|AAP52371.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1784

 Score = 73.9 bits (180), Expect(4) = 7e-25
 Identities = 40/112 (35%), Positives = 60/112 (53%)
 Frame = -1

Query: 640  DVVAGKVSVNSVPIMPLFDSGASHCFISSRFVSMHSIHCTKLDNAWKISTDNGVIATNRM 461
            DV+ G   ++S+P   LFDSGASH FIS  FV  + +   +L N   I+T  GV+     
Sbjct: 673  DVIVGTFLIHSIPATILFDSGASHSFISVPFVGKNQLGVERLRNPLLITTPGGVMTAKYY 732

Query: 460  CESCTVEVCGRVMHVDMFVLDTQGCNAILGMTWLARTMQLSTVARTLPSRFR 305
              +  +E+ G     D+ +LDT+  + ILGM WLA+   +   AR   + +R
Sbjct: 733  SPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWLAQFQGVVDCARRTVTLYR 784



 Score = 40.4 bits (93), Expect(4) = 7e-25
 Identities = 19/33 (57%), Positives = 23/33 (69%)
 Frame = -3

Query: 164 RSEIEFTIDLLPETAPIFKPPHRMTPIELAELK 66
           + EIEF IDL P T P+ K P+RM   ELAE+K
Sbjct: 832 KREIEFRIDLAPGTTPLHKRPYRMAANELAEVK 864



 Score = 35.8 bits (81), Expect(4) = 7e-25
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = -1

Query: 67  KQIQKYQDKEYIRLSTSPWGAP 2
           KQ+++ ++K YIR STSPWGAP
Sbjct: 865 KQLEELKEKGYIRPSTSPWGAP 886



 Score = 35.0 bits (79), Expect(4) = 7e-25
 Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = -2

Query: 291 PIHWRRADRKMQQADIHMAEAQESIPVAEEFTDVLGE-VPGLPPKRD 154
           P+ +      ++ +++H  E  E IPV  EF DV  E +PG+PPKR+
Sbjct: 789 PVVFFAPPTSVRSSELHQIELSE-IPVVREFGDVFPEELPGMPPKRE 834


>gb|ABA98482.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1803

 Score = 74.3 bits (181), Expect(4) = 1e-24
 Identities = 41/112 (36%), Positives = 60/112 (53%)
 Frame = -1

Query: 640  DVVAGKVSVNSVPIMPLFDSGASHCFISSRFVSMHSIHCTKLDNAWKISTDNGVIATNRM 461
            DV+ G   V+S+P   LFDSGASH FIS  FV  + +   +L N   I+T  GV+     
Sbjct: 692  DVIVGTFLVHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYY 751

Query: 460  CESCTVEVCGRVMHVDMFVLDTQGCNAILGMTWLARTMQLSTVARTLPSRFR 305
              +  +E+ G     D+ +LDT+  + ILGM WLA+   +   AR   + +R
Sbjct: 752  SPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWLAQFQGVVDCARRTVTLYR 803



 Score = 42.0 bits (97), Expect(4) = 1e-24
 Identities = 19/33 (57%), Positives = 24/33 (72%)
 Frame = -3

Query: 164 RSEIEFTIDLLPETAPIFKPPHRMTPIELAELK 66
           + EIEF IDL P T P++K P+RM   ELAE+K
Sbjct: 851 KREIEFRIDLAPGTTPLYKRPYRMAANELAEVK 883



 Score = 35.8 bits (81), Expect(4) = 1e-24
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = -1

Query: 67  KQIQKYQDKEYIRLSTSPWGAP 2
           KQ+++ ++K YIR STSPWGAP
Sbjct: 884 KQLEELKEKGYIRPSTSPWGAP 905



 Score = 32.3 bits (72), Expect(4) = 1e-24
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = -2

Query: 291 PIHWRRADRKMQQADIHMAEAQESIPVAEEFTDVLGE-VPGLPPKRD 154
           P+ +      ++ +++H     E IPV  EF DV  E +PG+PPKR+
Sbjct: 808 PVVFFAPPTSVRSSELHQIGLSE-IPVVREFGDVFPEELPGMPPKRE 853


>gb|AAM14686.1|AC097446_15 Putative polyprotein [Oryza sativa Japonica Group]
 gb|AAP52176.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1859

 Score = 74.3 bits (181), Expect(4) = 1e-24
 Identities = 40/112 (35%), Positives = 60/112 (53%)
 Frame = -1

Query: 640  DVVAGKVSVNSVPIMPLFDSGASHCFISSRFVSMHSIHCTKLDNAWKISTDNGVIATNRM 461
            DV+ G   ++S+P   LFDSGASH FIS  FV  + +   +L N   I+T  GV+     
Sbjct: 807  DVIVGTFLIHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYF 866

Query: 460  CESCTVEVCGRVMHVDMFVLDTQGCNAILGMTWLARTMQLSTVARTLPSRFR 305
              +  +E+ G     D+ +LDT+  + ILGM WLA+   +   AR   + +R
Sbjct: 867  SPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWLAQFQGVVDCARRTVTLYR 918



 Score = 42.0 bits (97), Expect(4) = 1e-24
 Identities = 19/33 (57%), Positives = 24/33 (72%)
 Frame = -3

Query: 164  RSEIEFTIDLLPETAPIFKPPHRMTPIELAELK 66
            + EIEF IDL P T P++K P+RM   ELAE+K
Sbjct: 966  KREIEFRIDLAPGTTPLYKRPYRMAANELAEVK 998



 Score = 35.8 bits (81), Expect(4) = 1e-24
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = -1

Query: 67   KQIQKYQDKEYIRLSTSPWGAP 2
            KQ+++ ++K YIR STSPWGAP
Sbjct: 999  KQLEELKEKGYIRPSTSPWGAP 1020



 Score = 32.0 bits (71), Expect(4) = 1e-24
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = -2

Query: 291  PIHWRRADRKMQQADIHMAEAQESIPVAEEFTDVLGE-VPGLPPKRD 154
            P+ +      ++ +++H     E IP+  EF DV  E +PG+PPKR+
Sbjct: 923  PVVFFAPPTSVRSSELHQIGLSE-IPIVREFGDVFPEELPGMPPKRE 968