BLASTX nr result
ID: Ophiopogon25_contig00011813
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00011813
(846 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|OMO63131.1| Integrase, catalytic core [Corchorus capsularis] 208 1e-57
gb|OMO83306.1| Integrase, catalytic core [Corchorus capsularis] 199 5e-54
gb|ABB47665.1| retrotransposon protein, putative, unclassified, ... 193 4e-52
gb|OMO90284.1| Integrase, catalytic core [Corchorus capsularis] 182 3e-48
emb|CAC95126.1| gag-pol polyprotein [Populus deltoides] 179 2e-47
gb|OMO56344.1| Integrase, catalytic core [Corchorus capsularis] 175 9e-46
gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group] 173 4e-45
gb|OMO50708.1| Zinc finger, CCHC-type [Corchorus capsularis] 170 6e-44
gb|AAT47108.1| putative polyprotein [Oryza sativa Japonica Group] 162 2e-41
gb|KYP55818.1| Retrovirus-related Pol polyprotein from transposo... 159 2e-40
gb|KYP62834.1| Retrovirus-related Pol polyprotein from transposo... 154 2e-40
gb|KYP40139.1| Retrovirus-related Pol polyprotein from transposo... 150 3e-40
gb|KYP40130.1| Retrovirus-related Pol polyprotein from transposo... 149 1e-39
emb|CAN74794.1| hypothetical protein VITISV_041689 [Vitis vinifera] 157 1e-39
gb|KYP77410.1| Retrovirus-related Pol polyprotein from transposo... 155 3e-39
gb|PNX73744.1| gag-pol polyprotein, partial [Trifolium pratense] 155 3e-39
emb|CAN61929.1| hypothetical protein VITISV_014855 [Vitis vinifera] 155 8e-39
emb|CAN79492.1| hypothetical protein VITISV_033373 [Vitis vinifera] 155 9e-39
gb|KYP72724.1| Retrovirus-related Pol polyprotein from transposo... 154 2e-38
emb|CAN71267.1| hypothetical protein VITISV_017889 [Vitis vinifera] 154 2e-38
>gb|OMO63131.1| Integrase, catalytic core [Corchorus capsularis]
Length = 1000
Score = 208 bits (530), Expect = 1e-57
Identities = 108/271 (39%), Positives = 167/271 (61%), Gaps = 10/271 (3%)
Frame = -1
Query: 798 SYVALNLSVTEASSTSDFTTMSATSRGSIR--WIFDSGATHHMTFDHSILAHRSPVSDST 625
S + +L+ + A S D A S G+ W+ DSGA++HMT D SIL + +S
Sbjct: 248 SCIRNDLANSSAMSAVDQGINRAPSSGTSPSPWVLDSGASYHMTSDSSILENCLDLSQPL 307
Query: 624 YIYTANGTPIAATQTGNITLTSDPSSRFTLPSVFCIAKLIMQLLSIKKITDCNCNVLFTP 445
I TANG+ + ++ G++T S PS +F++P++F +L LLS+ ++ D C++ F+
Sbjct: 308 DIQTANGSLMQISKVGSVTTKSYPSGKFSIPNIFYAPQLSANLLSVGQLADLGCDIWFSD 367
Query: 444 TSYIVQD-HIGLKIGTGRKVNGLYQLEYLHSPSSPHSDVSLLI-------TSYMWHRRFG 289
+VQD H G +IG GR+ GLY LE+L P + V + ++WH R G
Sbjct: 368 VFCVVQDRHTGKQIGIGRREGGLYMLEFLFVPPIKQNFVMPAFVLDKNSSSFHLWHSRLG 427
Query: 288 HLSNSRLKILSDSGVLENFQFSSLYNCESCRFAKQTAVPFAPSNHTSSEIFDLVHSDIWG 109
H+S+SRL+ +S G+L N ++S + +C++C+ AK +A+PF S S+ FDLVHSD+WG
Sbjct: 428 HVSSSRLRYMSSVGLLGNVKYSDISDCKACKLAKFSALPFNKSTSVSNAAFDLVHSDVWG 487
Query: 108 PAPVSSLSGYNYYVCFVDDYSRYTWVYFLRN 16
P+PV++ G YYV FVDDYSRY+W++ LR+
Sbjct: 488 PSPVATKGGSLYYVLFVDDYSRYSWIFLLRH 518
>gb|OMO83306.1| Integrase, catalytic core [Corchorus capsularis]
Length = 1165
Score = 199 bits (505), Expect = 5e-54
Identities = 104/267 (38%), Positives = 161/267 (60%), Gaps = 19/267 (7%)
Frame = -1
Query: 759 STSDFTTMSATSRGSIR-----------WIFDSGATHHMTFDHSILAHRSPVSDSTYIYT 613
+T++F+ MS +G+ + WI DSGA+HHMT + S L + S +S I+
Sbjct: 370 ATANFSAMSVADQGTNKILPSPPSGNSPWILDSGASHHMTSNSSFLENCSHLSQPIDIHI 429
Query: 612 ANGTPIAATQTGNITLTSDPSSRFTLPSVFCIAKLIMQLLSIKKITDCNCNVLFTPTSYI 433
ANG+ + ++ G+IT S P +F +P+V +L + LLS+ ++ D C++ F+ +
Sbjct: 430 ANGSSMQVSKVGSITTKSYPLGKFYVPNVLYAPQLSVNLLSVGQLADFGCDIWFSDIFCV 489
Query: 432 VQD-HIGLKIGTGRKVNGLYQLEYLHSPSSPHS-DVSLLITS------YMWHRRFGHLSN 277
VQD H G +IG GR+ GLY L++L P + +S + ++WH R GH+S+
Sbjct: 490 VQDRHTGKQIGIGRREGGLYVLDFLFVPQIQQNFAMSAFVLDKNSSSFHLWHSRLGHVSS 549
Query: 276 SRLKILSDSGVLENFQFSSLYNCESCRFAKQTAVPFAPSNHTSSEIFDLVHSDIWGPAPV 97
SRL+ + G+L N ++S + +C+ C AK +A+PF S S+ FDLVHSD+WGP+PV
Sbjct: 550 SRLRYMLSVGLLGNVKYSDISDCKGCILAKFSALPFNKSTSISNAPFDLVHSDVWGPSPV 609
Query: 96 SSLSGYNYYVCFVDDYSRYTWVYFLRN 16
++ G YYV FVDDYSRY WVY +R+
Sbjct: 610 ATKGGSVYYVSFVDDYSRYCWVYLMRH 636
>gb|ABB47665.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
gb|ABB47666.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1682
Score = 193 bits (491), Expect = 4e-52
Identities = 111/261 (42%), Positives = 148/261 (56%), Gaps = 12/261 (4%)
Frame = -1
Query: 762 SSTSDFTTMSATSRGSIRWIFDSGATHHMTFDHSILAHRSPVSDSTYIYTANGTPIAATQ 583
+S S +T+ T S WI DSGA+ HM+FD S L V + ++TANGT T
Sbjct: 168 ASCSSISTV--TPIASQPWILDSGASFHMSFDDSWLTSCRLVKNGATVHTANGTLCKVTH 225
Query: 582 TGNITLTSDPSSRFTLPSVFCIAKLIMQLLSIKKITDCNCNVLFTPTSYIVQD-HIGLKI 406
G+I+ S +FT+P+V + KL M L+S+ ++TD NC V F TS VQD H G I
Sbjct: 226 QGSIS-----SPQFTVPNVSLVPKLSMNLISVGQLTDTNCFVGFDDTSCFVQDRHTGAVI 280
Query: 405 GTGRKVN---GLYQLEYLHSPSSPHSDVSLLITSY--------MWHRRFGHLSNSRLKIL 259
GTG + GLY L+ L PSS + S+ WH R GHL SRL L
Sbjct: 281 GTGHRQKRSCGLYILDSLSLPSSSTNTPSVYSPMCSTACKSFPQWHHRLGHLCGSRLATL 340
Query: 258 SDSGVLENFQFSSLYNCESCRFAKQTAVPFAPSNHTSSEIFDLVHSDIWGPAPVSSLSGY 79
+ GVL + + + C+ C+ KQ +P+ S SS FDLVHSD+WG +P S G+
Sbjct: 341 INQGVLGSVPVDTTFVCKGCKLGKQVQLPYPSSTSRSSRPFDLVHSDVWGKSPFPSKGGH 400
Query: 78 NYYVCFVDDYSRYTWVYFLRN 16
NYYV FVDDYSRYTW+YF+++
Sbjct: 401 NYYVIFVDDYSRYTWIYFMKH 421
>gb|OMO90284.1| Integrase, catalytic core [Corchorus capsularis]
Length = 1323
Score = 182 bits (462), Expect = 3e-48
Identities = 110/281 (39%), Positives = 155/281 (55%), Gaps = 18/281 (6%)
Frame = -1
Query: 804 ITSYVALNLSVTEASSTSDFTTMSATSRG--SIRWIFDSGATHHMTFDHSILAHRSPVSD 631
I V ++S + S + +TS G S WI DSGA +HMTFD SIL P+S
Sbjct: 300 IIRQVISSMSNNSMGNNSITASALSTSPGISSKDWIIDSGAFNHMTFDSSILESSKPISY 359
Query: 630 STYIYTANGTPIAATQTGNITLTSDPSSRFTLPSVFCIAKLIMQLLSIKKITDCNCNVLF 451
S+ I+TANG+ + AT G+++ + + S L V + L M LLS+ ++ D +V+F
Sbjct: 360 SSSIHTANGSSMFATHIGSVSCSKNVS----LDDVLLVPSLSMNLLSVGQLCDLGLDVIF 415
Query: 450 TPTSYIVQDHI-GLKIGTGRKVNGLYQLEYLHSP---------------SSPHSDVSLLI 319
+VQD + G +GTGRK L+ LE LH P S + V L
Sbjct: 416 RSHGCVVQDCLTGRVVGTGRKFGRLFVLETLHIPYRLFDQKLNSFCVQKSLLAATVQKLS 475
Query: 318 TSYMWHRRFGHLSNSRLKILSDSGVLENFQFSSLYNCESCRFAKQTAVPFAPSNHTSSEI 139
+WHRR H+S SRL+ L SG L + + + C SC+ AKQ+A+PF S S
Sbjct: 476 PFSLWHRRLAHISCSRLQYLVSSGKLGSVKPEASTFCISCKLAKQSALPFNTSESVSLSP 535
Query: 138 FDLVHSDIWGPAPVSSLSGYNYYVCFVDDYSRYTWVYFLRN 16
FDL+HSD+WGP+ + ++ G YYV FVDD+SRYTW+Y R+
Sbjct: 536 FDLIHSDVWGPSRLPTMGGSCYYVIFVDDFSRYTWLYLFRH 576
>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
Length = 1382
Score = 179 bits (455), Expect = 2e-47
Identities = 111/294 (37%), Positives = 166/294 (56%), Gaps = 30/294 (10%)
Frame = -1
Query: 807 HITSYVALNLSVTEASSTSDF---------TTMSATSRGSI----------RWIFDSGAT 685
H T+ VA S+T+ ++ ++ MSA+S G + W+ DSGA+
Sbjct: 290 HNTAAVASPGSITDPNTLAEQFQKFLSLQPQAMSASSIGQLPHSSSGISHSEWVLDSGAS 349
Query: 684 HHMTFDHSILAHRSPVSDSTYIYTANGTPIAATQTGNITLTSDPSSRFTLPSVFCIAKLI 505
HHM+ D S SP+S S + TA+GTP+ G++ + +LP+V+ I KL
Sbjct: 350 HHMSPDSSSFTSVSPLS-SIPVMTADGTPMPLAGVGSVV-----TLHLSLPNVYLIPKLK 403
Query: 504 MQLLSIKKITDC-NCNVLFTPTSYIVQDHIGLK-IGTGRKVNGLYQLEYLHSP---SSPH 340
+ L SI +I D + V+F+ + VQD K IGTGR+ NGLY L+ L P ++
Sbjct: 404 LNLASIGQICDSGDYLVMFSGSFCCVQDLQSQKLIGTGRRENGLYILDELKVPVVVAATT 463
Query: 339 SDVSLLITS------YMWHRRFGHLSNSRLKILSDSGVLENFQFSSLYNCESCRFAKQTA 178
D+S S Y+WH R GH+S+SRL+ L+ +G L N + + +C C+ AK +A
Sbjct: 464 VDLSFFRLSLSSSSFYLWHSRLGHVSSSRLRFLASTGALGNLKTCDISDCSGCKLAKFSA 523
Query: 177 VPFAPSNHTSSEIFDLVHSDIWGPAPVSSLSGYNYYVCFVDDYSRYTWVYFLRN 16
+PF S SS FDL+HSD+WGP+PVS+ G YYV F+DD++RY WVY +++
Sbjct: 524 LPFNRSTSVSSSPFDLIHSDVWGPSPVSTKGGSRYYVSFIDDHTRYCWVYLMKH 577
>gb|OMO56344.1| Integrase, catalytic core [Corchorus capsularis]
Length = 1095
Score = 175 bits (443), Expect = 9e-46
Identities = 97/264 (36%), Positives = 152/264 (57%), Gaps = 3/264 (1%)
Frame = -1
Query: 798 SYVALNLSVTEASSTSDFTTMSATSRGSIR--WIFDSGATHHMTFDHSILAHRSPVSDST 625
S + +L+ + A S D A S G+ W+ DSGA++HMT D SIL + +S
Sbjct: 327 SCIRNDLANSSAMSAVDQGINRALSSGTSPSPWVLDSGASYHMTSDSSILENCLDLSQPL 386
Query: 624 YIYTANGTPIAATQTGNITLTSDPSSRFTLPSVFCIAKLIMQLLSIKKITDCNCNVLFTP 445
I TANG + ++ G++T S PS +F++P++F +L LLS+ ++ D C++ F+
Sbjct: 387 DIQTANGPLMQISKVGSVTTKSYPSGKFSIPNIFYAPQLSANLLSVGQLADLGCDIWFSD 446
Query: 444 TSYIVQD-HIGLKIGTGRKVNGLYQLEYLHSPSSPHSDVSLLITSYMWHRRFGHLSNSRL 268
+VQD H G +IG GR+ G++ H+S+SRL
Sbjct: 447 VFCVVQDRHTGKQIGIGRR-EGVF---------------------------ICHVSSSRL 478
Query: 267 KILSDSGVLENFQFSSLYNCESCRFAKQTAVPFAPSNHTSSEIFDLVHSDIWGPAPVSSL 88
+ +S G+L N ++S + +C++C+ AK +A+PF S S+ FDLVHSD+WGP+PV++
Sbjct: 479 RYMSSVGLLGNVKYSDISDCKACKLAKFSALPFNKSTSVSNAAFDLVHSDVWGPSPVATK 538
Query: 87 SGYNYYVCFVDDYSRYTWVYFLRN 16
G YYV FVDDYSRY+W++ LR+
Sbjct: 539 GGSLYYVLFVDDYSRYSWIFLLRH 562
>gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1419
Score = 173 bits (438), Expect = 4e-45
Identities = 95/253 (37%), Positives = 140/253 (55%), Gaps = 22/253 (8%)
Frame = -1
Query: 708 WIFDSGATHHMTFDHSILAHRSPVSDSTYIYTANGTPIAATQTGNITLTSDPSSRFTLPS 529
WI DSGA+ HMT D S L S ++ ++ + TA+GT + + G + + +T+P
Sbjct: 488 WILDSGASFHMTPDISQLQSCS-LTKASSVQTADGTILPVSLQGTLQ-----TKEYTIPD 541
Query: 528 VFCIAKLIMQLLSIKKITDCNCNVLFTPTS-YIVQDHIGLKIGTGRKVNG---LYQLEYL 361
VF + L M+L+S+ ++TD C+V+F + Y++ G +G G ++NG LY L++L
Sbjct: 542 VFYVPNLSMKLISVGQLTDMKCHVVFDEAACYVLDRATGNLVGAGHRLNGPRGLYVLDHL 601
Query: 360 HSPSSPHSDV------------------SLLITSYMWHRRFGHLSNSRLKILSDSGVLEN 235
H P+S S SL + WH R GHL SRL L GVL N
Sbjct: 602 HLPTSTSSGFPGNSASATSITSNSSVYSSLSASFPQWHHRLGHLCGSRLSTLVQQGVLGN 661
Query: 234 FQFSSLYNCESCRFAKQTAVPFAPSNHTSSEIFDLVHSDIWGPAPVSSLSGYNYYVCFVD 55
+ + C+ C+ KQ +P+ S S+ F LVHSD+WGPAP S G+ YYV FVD
Sbjct: 662 VSIETDFVCKGCKLGKQVQLPYRSSMSRSTSPFALVHSDVWGPAPFHSKGGHRYYVIFVD 721
Query: 54 DYSRYTWVYFLRN 16
D+SRYTW+YF+++
Sbjct: 722 DFSRYTWIYFMKH 734
>gb|OMO50708.1| Zinc finger, CCHC-type [Corchorus capsularis]
Length = 2413
Score = 170 bits (430), Expect = 6e-44
Identities = 90/241 (37%), Positives = 144/241 (59%), Gaps = 10/241 (4%)
Frame = -1
Query: 783 NLSVTEASSTSDFTTMSATSRGSIR--WIFDSGATHHMTFDHSILAHRSPVSDSTYIYTA 610
+L+ + A S D A S G+ W+ DSGA++HMT D SIL + +S I A
Sbjct: 1421 DLANSSAMSAVDQGINRAPSSGTSPSPWVLDSGASYHMTSDSSILENCLDLSQPLDIQIA 1480
Query: 609 NGTPIAATQTGNITLTSDPSSRFTLPSVFCIAKLIMQLLSIKKITDCNCNVLFTPTSYIV 430
NG+ + ++ G++T S PS +F++P++F +L LLS+ ++ D C++ F+ +V
Sbjct: 1481 NGSLMQISKVGSVTTKSYPSGKFSIPNIFYAPQLSANLLSVGQLADLGCDIWFSDVFCVV 1540
Query: 429 QD-HIGLKIGTGRKVNGLYQLEYLHSPSSPHSDVSLLI-------TSYMWHRRFGHLSNS 274
QD H G +IG GR+ GLY LE+L P + V + ++WH R GH+S+S
Sbjct: 1541 QDRHTGKQIGIGRREGGLYMLEFLFVPPIKQNFVMPAFVLDKNSSSFHLWHSRLGHVSSS 1600
Query: 273 RLKILSDSGVLENFQFSSLYNCESCRFAKQTAVPFAPSNHTSSEIFDLVHSDIWGPAPVS 94
RL+ +S G+L N ++S + +C++C+ AK + +PF S S+ FDLVHSD+WGP+PV+
Sbjct: 1601 RLRYMSSVGLLGNVKYSDISDCKACKLAKFSTLPFNKSTSVSNAAFDLVHSDVWGPSPVA 1660
Query: 93 S 91
+
Sbjct: 1661 T 1661
>gb|AAT47108.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1204
Score = 162 bits (410), Expect = 2e-41
Identities = 88/218 (40%), Positives = 127/218 (58%), Gaps = 10/218 (4%)
Frame = -1
Query: 645 SPVSDSTYIYTANGTPIAATQTGNITLTSDPSSRFTLPSVFCIAKLIMQLLSIKKITDCN 466
S S T ++TA+GTP+A G ++++S F++P+V + KL MQL+S ++TD
Sbjct: 380 SSASVPTTVHTADGTPLAIVGRGTLSISS-----FSVPAVSYVPKLAMQLMSAGQLTDHG 434
Query: 465 CNVLFTPTSYIVQDH-IGLKIGTG---RKVNGLYQLEYLHSPSSPH-----SDVSLLITS 313
C V+ S VQDH GL +GTG R L++L++L PS+ S S ++
Sbjct: 435 CRVILDSDSCCVQDHRTGLLVGTGPRRRDSQRLWELDWLRLPSAAPASLLASTASSTVSF 494
Query: 312 YMWHRRFGHLSNSRLKILSDSGVLENFQFS-SLYNCESCRFAKQTAVPFAPSNHTSSEIF 136
WH R GHL SRL L G+L + + SL C+ C+ KQ +P+ S S F
Sbjct: 495 AQWHHRLGHLCGSRLSALVRRGLLGSVSGAVSLNQCQGCKLGKQIQLPYHSSESVSKRPF 554
Query: 135 DLVHSDIWGPAPVSSLSGYNYYVCFVDDYSRYTWVYFL 22
DLVHSD+WGPAP S G+ YY+ F+DD+SR+TW+YF+
Sbjct: 555 DLVHSDVWGPAPFVSKGGHRYYIIFIDDFSRHTWIYFM 592
>gb|KYP55818.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1103
Score = 159 bits (403), Expect = 2e-40
Identities = 84/234 (35%), Positives = 136/234 (58%), Gaps = 2/234 (0%)
Frame = -1
Query: 711 RWIFDSGATHHMTFDHSILAHRSPVSDSTYIYTANGTPIAATQTGNITLTSDPSSRFTLP 532
RW FDS +HMT + + S ++I+TA+G+ + + G I+ S ++P
Sbjct: 155 RWYFDSACCNHMTSASHVFSDLSSRDRISHIHTADGSLMEVSHKGPISTPS-----LSMP 209
Query: 531 SVFCIAKLIMQLLSIKKITDCNCNVLFTPTSYIVQD-HIGLKIGTGRKVNGLYQLEYLHS 355
+ I KL L+S+ ++ D + F+ T VQD G IG GRK+ +++L LH
Sbjct: 210 DAYLIPKLNFNLVSVGQLCDLGYILTFSSTGCSVQDPRTGKIIGNGRKIGRMFELTTLHV 269
Query: 354 PSSPHSDVSLLITS-YMWHRRFGHLSNSRLKILSDSGVLENFQFSSLYNCESCRFAKQTA 178
PSS + + +S ++WH+R GH S S+L+ L G L + + L +C +C+ AKQ A
Sbjct: 270 PSSNNLCAASTPSSIHLWHQRLGHTSLSKLRPLISMGSLGSIKEDKL-DCTACQTAKQAA 328
Query: 177 VPFAPSNHTSSEIFDLVHSDIWGPAPVSSLSGYNYYVCFVDDYSRYTWVYFLRN 16
+PF S +S +FDLVH D+WGPAP ++ G Y++ F+DD+SR+TW+Y +++
Sbjct: 329 LPFNDSTSSSVSLFDLVHYDVWGPAPTPTMGGCRYFIIFIDDFSRFTWIYLMKS 382
>gb|KYP62834.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 396
Score = 154 bits (388), Expect = 2e-40
Identities = 91/268 (33%), Positives = 140/268 (52%), Gaps = 8/268 (2%)
Frame = -1
Query: 801 TSYVALNLSVTEASSTSDFTTMSATSRGSIRWIFDSGATHHMTFDHSILAHRSPVSDSTY 622
T+ L L + + S F+ + + + S W FDSGA++HMT + L + +
Sbjct: 73 TAVPTLTLEMVQQMIISTFSALGFSGKSSSPWYFDSGASNHMTNNTRFLTNIKKYLGNLN 132
Query: 621 IYTANGTPIAATQTGNITLTSDPSSRFTLPSVFCIAKLIMQLLSIKKITDCNCNVLFTPT 442
I+TA G + T TG+I+ + L +VF L L+S+ ++ D C V F+ +
Sbjct: 133 IHTAGGNQLPITATGDISSS--------LTNVFVAPGLTSNLISVGQLVDNYCRVQFSQS 184
Query: 441 SYIVQD-HIGLKIGTGRKVNGLYQLEYLHSPSSPHSDVSL---LITSYMWHRRFGHLSNS 274
+VQD H G I G KV L+ + + SPS VS ++ +WHRR GH +++
Sbjct: 185 GCLVQDQHSGTIIAKGPKVGRLFPIHFSLSPSLSLPLVSCNSAIVDYQVWHRRLGHPNSN 244
Query: 273 RLKILSDSGVLENFQFSSL----YNCESCRFAKQTAVPFAPSNHTSSEIFDLVHSDIWGP 106
L + S L N SL ++C C+ K +PF ++ FD++HSD+WG
Sbjct: 245 VLHDMLKSSFLGNKHTPSLNDIHFDCIPCKLGKSKILPFPTHQSHVTQPFDIIHSDVWGI 304
Query: 105 APVSSLSGYNYYVCFVDDYSRYTWVYFL 22
APV+S + Y Y+V F+DDYS +TWVYFL
Sbjct: 305 APVTSHAYYKYFVTFIDDYSHFTWVYFL 332
>gb|KYP40139.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
gb|KYP40141.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 300
Score = 150 bits (380), Expect = 3e-40
Identities = 88/254 (34%), Positives = 138/254 (54%), Gaps = 8/254 (3%)
Frame = -1
Query: 753 SDFTTMSATSRGSIRWIFDSGATHHMTFDHSILAHRSPVSDSTYIYTANGTPIAATQTGN 574
S F+ + + + S W FDSGA++HMT + L + + I+TA G + TG+
Sbjct: 4 STFSALGFSGKSSSPWYFDSGASNHMTNNTRFLTNIKRYLGNLNIHTAGGNQLPIIATGD 63
Query: 573 ITLTSDPSSRFTLPSVFCIAKLIMQLLSIKKITDCNCNVLFTPTSYIVQD-HIGLKIGTG 397
I+ + L +VF L L+SI ++ + +C V F+ + +V D H G+ I G
Sbjct: 64 ISSS--------LTNVFVAPGLTSNLISIGQLVNNDCRVQFSQSGCLVLDQHSGMIIAKG 115
Query: 396 RKVNGLYQLEYLHSPSS--PHSDVSLLITSY-MWHRRFGHLSNSRLKILSDSGVLENFQF 226
+V L+ + + SPS P + +I Y +WHRR GH +++ L + G L N
Sbjct: 116 LQVRRLFPIHFSLSPSLSLPLVSCNFVIVDYQVWHRRLGHPNSNVLHDMLKYGFLGNKHT 175
Query: 225 SSL----YNCESCRFAKQTAVPFAPSNHTSSEIFDLVHSDIWGPAPVSSLSGYNYYVCFV 58
SL ++C C+ K +PF ++ FD++HSD+WG APV+S + Y Y+V F+
Sbjct: 176 PSLNDIHFHCIPCKLGKSKILPFPTHQSHVTQPFDIIHSDVWGVAPVTSHAHYKYFVTFI 235
Query: 57 DDYSRYTWVYFLRN 16
DDYSR+TWVYFLR+
Sbjct: 236 DDYSRFTWVYFLRS 249
>gb|KYP40130.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 300
Score = 149 bits (377), Expect = 1e-39
Identities = 87/254 (34%), Positives = 138/254 (54%), Gaps = 8/254 (3%)
Frame = -1
Query: 753 SDFTTMSATSRGSIRWIFDSGATHHMTFDHSILAHRSPVSDSTYIYTANGTPIAATQTGN 574
S F+ + + + S W FD+GA++HMT + L + + I+TA G + TG+
Sbjct: 4 STFSALGFSDKSSSPWYFDAGASNHMTNNTRFLTNIKRYLGNLNIHTAGGNQLPIIATGD 63
Query: 573 ITLTSDPSSRFTLPSVFCIAKLIMQLLSIKKITDCNCNVLFTPTSYIVQD-HIGLKIGTG 397
I+ + L +VF L L+SI ++ + +C V F+ + +V D H G+ I G
Sbjct: 64 ISSS--------LTNVFVAPGLTSNLISIGQLVNNDCRVQFSQSGCLVLDQHSGMIIAKG 115
Query: 396 RKVNGLYQLEYLHSPSS--PHSDVSLLITSY-MWHRRFGHLSNSRLKILSDSGVLENFQF 226
+V L+ + + SPS P + +I Y +WHRR GH +++ L + G L N
Sbjct: 116 LQVRRLFPIHFSLSPSLSLPLVSCNFVIVDYQVWHRRLGHPNSNVLHDMLKYGFLGNKHT 175
Query: 225 SSL----YNCESCRFAKQTAVPFAPSNHTSSEIFDLVHSDIWGPAPVSSLSGYNYYVCFV 58
SL ++C C+ K +PF ++ FD++HSD+WG APV+S + Y Y+V F+
Sbjct: 176 PSLNDIHFHCIPCKLGKSKILPFPTHQSHVTQPFDIIHSDVWGVAPVTSHAHYKYFVTFI 235
Query: 57 DDYSRYTWVYFLRN 16
DDYSR+TWVYFLR+
Sbjct: 236 DDYSRFTWVYFLRS 249
>emb|CAN74794.1| hypothetical protein VITISV_041689 [Vitis vinifera]
Length = 845
Score = 157 bits (396), Expect = 1e-39
Identities = 91/239 (38%), Positives = 129/239 (53%), Gaps = 8/239 (3%)
Frame = -1
Query: 708 WIFDSGATHHMTFDHSILAHRSPVSDSTYIYTANGTPIAATQTGNITLTSDPSSRFTLPS 529
W DSGA++HMT + + L H P + + I TANG+ + G D SS+FT
Sbjct: 339 WYVDSGASNHMTNNPTALCHVRPYAGQSSIQTANGSSLPIAAIG------DASSKFT--D 390
Query: 528 VFCIAKLIMQLLSIKKITDCNCNVLFTPTSYIVQDHI-GLKIGTGRKVNGLYQLEYLHSP 352
VF +L L+S+ ++ D NC V F+ +VQD + G I G KV L+ L
Sbjct: 391 VFLAPQLSTNLISVGQLVDNNCAVNFSGNGCVVQDQVTGKPIAKGPKVGRLFPLFLPIPD 450
Query: 351 SSPHSDVSLLIT------SYMWHRRFGHLSNSRLKILSDSGVLENF-QFSSLYNCESCRF 193
SP S + S +WHRR GH + L + +S + N ++S C+SC+
Sbjct: 451 FSPRSSIKSFACNNVSDLSMVWHRRLGHPNTQILSHVLNSDLPGNKDRYSLSLECDSCKL 510
Query: 192 AKQTAVPFAPSNHTSSEIFDLVHSDIWGPAPVSSLSGYNYYVCFVDDYSRYTWVYFLRN 16
K +PF +S FDL+HSD+WGP+PVSS + YYV F+DD+SR+TWVYFLR+
Sbjct: 511 GKSKTLPFPLHASRASHCFDLIHSDVWGPSPVSSHEKFKYYVTFIDDHSRFTWVYFLRS 569
>gb|KYP77410.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 672
Score = 155 bits (391), Expect = 3e-39
Identities = 87/250 (34%), Positives = 142/250 (56%), Gaps = 2/250 (0%)
Frame = -1
Query: 759 STSDFTTMSATSRGSIRWIFDSGATHHMTFDHSILAHRSPVSDSTYIYTANGTPIAATQT 580
S+S+ T AT+ G+ RW FDS +HMT + + S ++I+TA+G+ + +
Sbjct: 145 SSSNPPTALATTPGNTRWYFDSTCCNHMTSSSHVFSDLSSRDRISHIHTADGSLMEVSHK 204
Query: 579 GNITLTSDPSSRFTLPSVFCIAKLIMQLLSIKKITDCNCNVLFTPTSYIVQD-HIGLKIG 403
G I++ S ++P + I KL L+S+ ++ D + F+ T VQD G IG
Sbjct: 205 GPISIPS-----LSMPDAYLIPKLNFNLVSVGQLCDLGYILTFSSTGCSVQDPRTGKIIG 259
Query: 402 TGRKVNGLYQLEYLHSPSSPHSDVSLLITS-YMWHRRFGHLSNSRLKILSDSGVLENFQF 226
GRK+ +++L LH PSS + + +S ++WH+ GH S S+L+ L G L + +
Sbjct: 260 NGRKIGRMFELTTLHVPSSNNLCATSTPSSIHLWHQGLGHTSLSKLRPLISMGSLGSIKE 319
Query: 225 SSLYNCESCRFAKQTAVPFAPSNHTSSEIFDLVHSDIWGPAPVSSLSGYNYYVCFVDDYS 46
L +C +C+ KQ A+ F S +S FDLVHSD+WG AP ++ G Y+V +DD+S
Sbjct: 320 DKL-DCTACQTTKQAALLFNDSISSSISPFDLVHSDVWGSAPTPTMGGCRYFVILIDDFS 378
Query: 45 RYTWVYFLRN 16
R+TW+Y +++
Sbjct: 379 RFTWIYLMKS 388
>gb|PNX73744.1| gag-pol polyprotein, partial [Trifolium pratense]
Length = 737
Score = 155 bits (392), Expect = 3e-39
Identities = 89/241 (36%), Positives = 132/241 (54%), Gaps = 2/241 (0%)
Frame = -1
Query: 732 ATSRGSIRWIFDSGATHHMTFDHSILAHRSPVSDSTYIYTANGTPIAATQTGNITLTSDP 553
+T+ G+ +W DS +HMT + + + + I+TA+G+ + T G+I+L
Sbjct: 340 STTPGNSKWYLDSACCNHMTSTSHLFSSLYENTTTQSIHTADGSLMPVTHKGSISL---- 395
Query: 552 SSRFTLPSVFCIAKLIMQLLSIKKITDCNCNVLFTPTSYIVQD-HIGLKIGTGRKVNGLY 376
S +LP + I KL L+S+ ++ D + F+ + VQD G IGTG K L+
Sbjct: 396 -SNLSLPDTYLIPKLSFNLISVGQLCDLGYELTFSSSGCRVQDPRTGQLIGTGCKTGRLF 454
Query: 375 QLEYLHSPSSPHSDVSLLITSY-MWHRRFGHLSNSRLKILSDSGVLENFQFSSLYNCESC 199
+L LH P P+ + +S +WH R H S +++ L G L + SL C SC
Sbjct: 455 ELTKLHVPQVPNICAASKDSSIRLWHCRLAHSSIGKMRHLVSQGHLGSVANESL-ECTSC 513
Query: 198 RFAKQTAVPFAPSNHTSSEIFDLVHSDIWGPAPVSSLSGYNYYVCFVDDYSRYTWVYFLR 19
+ AKQ A+ F S S FDLVHSDIWGPAP S+ G Y+V FVDDYSR+TW++ ++
Sbjct: 514 QTAKQPALSFNKSTSISISSFDLVHSDIWGPAPTPSMGGSRYFVIFVDDYSRFTWIFMMK 573
Query: 18 N 16
N
Sbjct: 574 N 574
>emb|CAN61929.1| hypothetical protein VITISV_014855 [Vitis vinifera]
Length = 1271
Score = 155 bits (391), Expect = 8e-39
Identities = 84/262 (32%), Positives = 144/262 (54%), Gaps = 8/262 (3%)
Frame = -1
Query: 777 SVTEASSTSDFTTMSATSRGSIRWIFDSGATHHMTFDHSILAHRSPVSDSTYIYTANGTP 598
+V + S T +S S W+FDS +HMT S+ + P I+ A+G+
Sbjct: 315 AVRMVGNASLSTALSVLPGKSQTWLFDSACCNHMTPHSSLFTNLDPAPHPLNIHIADGST 374
Query: 597 IAATQTGNITLTSDPSSRFTLPSVFCIAKLIMQLLSIKKITDCNCNVLFTPTSYIVQD-H 421
+ G ++ +S ++P VF + L L S+ ++ + ++F + IVQD
Sbjct: 375 MHGNSLGFVS-----TSTLSVPGVFHVPDLSYNLCSVGQLAELGYRLIFXYSGCIVQDPR 429
Query: 420 IGLKIGTGRKVNGLYQLEYLHSP-------SSPHSDVSLLITSYMWHRRFGHLSNSRLKI 262
G ++GTG +V ++ + LH P ++ + VS L + +WH R GH +SR++
Sbjct: 430 TGQELGTGPRVGRMFPVNNLHLPPVAPVSVAAATAAVSSLPSLALWHSRLGHAPSSRVQQ 489
Query: 261 LSDSGVLENFQFSSLYNCESCRFAKQTAVPFAPSNHTSSEIFDLVHSDIWGPAPVSSLSG 82
L G+L + + ++C SC+ KQ A+PF S+ S IF+L+HSD+WGP+PV+S+ G
Sbjct: 490 LVSRGLLGSVSKDN-FDCTSCQLGKQPALPFNNSDSISKSIFELIHSDVWGPSPVASIGG 548
Query: 81 YNYYVCFVDDYSRYTWVYFLRN 16
Y+V F+DDYSRY+W++ +++
Sbjct: 549 SRYFVVFIDDYSRYSWIFPMKS 570
>emb|CAN79492.1| hypothetical protein VITISV_033373 [Vitis vinifera]
Length = 2116
Score = 155 bits (391), Expect = 9e-39
Identities = 92/240 (38%), Positives = 132/240 (55%), Gaps = 9/240 (3%)
Frame = -1
Query: 708 WIFDSGATHHMTFDHSILAHRSPVSDSTYIYTANGTPIAATQTGNITLTSDPSSRFTLPS 529
W DSGA++HMT + + L H P + + I TANG+ + G D SS+FT
Sbjct: 1124 WYVDSGASNHMTNNPTALCHVRPYTGQSSIQTANGSSLPIAAIG------DASSKFT--D 1175
Query: 528 VFCIAKLIMQLLSIKKITDCNCNVLFTPTSYIVQDHI-GLKIGTGRKVNGLYQLEYLHSP 352
VF +L L+S+ ++ D NC V F+ +VQD + G I G KV L+ L +L P
Sbjct: 1176 VFLAPQLSTTLISVGQLVDNNCAVNFSGNGCVVQDQVTGKPIAKGPKVGRLFPL-FLPVP 1234
Query: 351 S-SPHSDVSLLIT------SYMWHRRFGHLSNSRLKILSDSGVLENF-QFSSLYNCESCR 196
+ SP S + S +WHRR GH + L + +S + N ++S C+SC+
Sbjct: 1235 NFSPLSSIKSFACNNVSDLSMVWHRRLGHPNTQILSHVLNSDLPGNKDRYSLSLECDSCK 1294
Query: 195 FAKQTAVPFAPSNHTSSEIFDLVHSDIWGPAPVSSLSGYNYYVCFVDDYSRYTWVYFLRN 16
K +PF +S FDL+HSD WGP+P+SS + YYV F+DD+SR+TWVYFLR+
Sbjct: 1295 LGKSKTLPFPLHASRASHCFDLIHSDFWGPSPISSYEKFKYYVTFIDDHSRFTWVYFLRS 1354
>gb|KYP72724.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1282
Score = 154 bits (389), Expect = 2e-38
Identities = 91/260 (35%), Positives = 138/260 (53%), Gaps = 8/260 (3%)
Frame = -1
Query: 771 TEASSTSDFTTMSATSRGSIRWIFDSGATHHMTFDHSILAHRSPVSDSTYIYTANGTPIA 592
T +S + T + S W FDSGA++HMT + L + + S + I+TA+G +
Sbjct: 232 TTSSKDDEQTNICKPFSISSPWYFDSGASNHMTNNAQFLTNITKYSGNLNIHTADGNSLP 291
Query: 591 ATQTGNITLTSDPSSRFTLPSVFCIAKLIMQLLSIKKITDCNCNVLFTPTSYIVQD-HIG 415
TG+I+ + L VF L L+S+ ++ D +C V F+ + +VQD H G
Sbjct: 292 IIATGDISSS--------LTDVFVSPSLTSNLISVGQLVDNDCRVEFSKSGCLVQDQHSG 343
Query: 414 LKIGTGRKVNGLYQLEYLHSPSSPHSDVSLL---ITSYMWHRRFGHLSNSRLKILSDSGV 244
I G K+ L+ L+ SPS P VS I +WH+R GH S++ L ++ SG
Sbjct: 344 TIIAKGPKLGRLFPLQSSLSPSLPLPFVSCNSAHIDYQLWHKRLGHPSSNVLHVILKSGF 403
Query: 243 LENFQFSSL----YNCESCRFAKQTAVPFAPSNHTSSEIFDLVHSDIWGPAPVSSLSGYN 76
L N L ++C C+ K +PF + FD++HSD+WG AP+ S + Y
Sbjct: 404 LGNKNSPPLHAVHFDCIPCKLGKSKTLPFPTHQSNVRKPFDMIHSDVWGVAPIISHAKYK 463
Query: 75 YYVCFVDDYSRYTWVYFLRN 16
Y+V F+DDY+R+TWVYFLR+
Sbjct: 464 YFVTFIDDYTRFTWVYFLRS 483
>emb|CAN71267.1| hypothetical protein VITISV_017889 [Vitis vinifera]
Length = 1576
Score = 154 bits (389), Expect = 2e-38
Identities = 90/239 (37%), Positives = 129/239 (53%), Gaps = 8/239 (3%)
Frame = -1
Query: 708 WIFDSGATHHMTFDHSILAHRSPVSDSTYIYTANGTPIAATQTGNITLTSDPSSRFTLPS 529
W DSGA++HMT + + L + P + + I TANG+ + G D SS+FT
Sbjct: 504 WYVDSGASNHMTNNPTALCYVRPYAGQSSIQTANGSSLPIAAIG------DASSKFT--D 555
Query: 528 VFCIAKLIMQLLSIKKITDCNCNVLFTPTSYIVQDHI-GLKIGTGRKVNGLYQLEYLHSP 352
VF +L L+S+ ++ D NC V F+ +VQD + G I G KV L+ L
Sbjct: 556 VFLAPQLSTNLISVGQLVDNNCAVNFSGNGCVVQDQVTGKPIAKGPKVGRLFPLFLPIPD 615
Query: 351 SSPHSDVSLLIT------SYMWHRRFGHLSNSRLKILSDSGVLENF-QFSSLYNCESCRF 193
SP S + S +WHRR GH + L + +S + N ++S C+SC+
Sbjct: 616 FSPXSSIKSFACNNVSDLSMVWHRRLGHPNTQILSHVLNSDLPGNKDRYSLSLECDSCKL 675
Query: 192 AKQTAVPFAPSNHTSSEIFDLVHSDIWGPAPVSSLSGYNYYVCFVDDYSRYTWVYFLRN 16
K +PF +S FDL+HSD+WGP+PVSS + YYV F+DD+SR+TWVYFLR+
Sbjct: 676 GKSKTLPFPLHASRASHCFDLIHSDVWGPSPVSSHEKFKYYVTFIDDHSRFTWVYFLRS 734