BLASTX nr result
ID: Ophiopogon25_contig00011803
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00011803
(1041 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020270531.1| LOW QUALITY PROTEIN: tyrosine--tRNA ligase, ... 102 2e-20
ref|XP_020268918.1| tyrosine--tRNA ligase, chloroplastic/mitocho... 100 2e-19
ref|XP_020100830.1| tyrosine--tRNA ligase, chloroplastic/mitocho... 83 8e-14
ref|XP_008801775.1| PREDICTED: tyrosine--tRNA ligase, chloroplas... 83 1e-13
ref|XP_009414004.1| PREDICTED: tyrosine--tRNA ligase, chloroplas... 82 2e-13
ref|XP_010500171.1| PREDICTED: tyrosine--tRNA ligase, chloroplas... 81 4e-13
ref|XP_010485586.1| PREDICTED: tyrosine--tRNA ligase, chloroplas... 81 4e-13
ref|XP_010500039.1| PREDICTED: tyrosine--tRNA ligase, chloroplas... 81 4e-13
gb|OAY62593.1| Tyrosine--tRNA ligase, chloroplastic/mitochondria... 81 4e-13
ref|XP_010927782.1| PREDICTED: tyrosine--tRNA ligase, chloroplas... 80 9e-13
ref|XP_010463686.1| PREDICTED: tyrosine--tRNA ligase, chloroplas... 80 1e-12
ref|XP_023641509.1| tyrosine--tRNA ligase, chloroplastic/mitocho... 78 5e-12
gb|EOA30268.1| hypothetical protein CARUB_v10013389mg, partial [... 78 5e-12
ref|XP_002884331.1| tyrosine--tRNA ligase, chloroplastic/mitocho... 77 7e-12
gb|PKA46071.1| tyrosyl-tRNA synthetase [Apostasia shenzhenica] 77 9e-12
ref|XP_003574045.1| PREDICTED: tyrosine--tRNA ligase, chloroplas... 77 9e-12
gb|KQK15695.2| hypothetical protein BRADI_1g24431v3, partial [Br... 77 1e-11
gb|PON92591.1| Tyrosine-tRNA ligase, bacterial-type [Trema orien... 77 1e-11
ref|XP_020173181.1| tyrosine--tRNA ligase, chloroplastic/mitocho... 76 2e-11
ref|XP_008783116.1| PREDICTED: tyrosine--tRNA ligase, chloroplas... 76 2e-11
>ref|XP_020270531.1| LOW QUALITY PROTEIN: tyrosine--tRNA ligase,
chloroplastic/mitochondrial-like [Asparagus officinalis]
Length = 533
Score = 102 bits (255), Expect = 2e-20
Identities = 52/61 (85%), Positives = 55/61 (90%)
Frame = -3
Query: 973 VALIGGATGRVGDPSGKSLERPELDVQTLENNSRAIKQLISKILGKSPGASAKDAILDAD 794
VA+IGGATGRVGDPSGKSLERPELD++TLENNSRAIKQLISKILG S G AKDAILD
Sbjct: 159 VAVIGGATGRVGDPSGKSLERPELDIETLENNSRAIKQLISKILGNSAGVFAKDAILDVG 218
Query: 793 S 791
S
Sbjct: 219 S 219
>ref|XP_020268918.1| tyrosine--tRNA ligase, chloroplastic/mitochondrial-like [Asparagus
officinalis]
gb|ONK66059.1| uncharacterized protein A4U43_C06F3740 [Asparagus officinalis]
Length = 481
Score = 99.8 bits (247), Expect = 2e-19
Identities = 51/61 (83%), Positives = 54/61 (88%)
Frame = -3
Query: 973 VALIGGATGRVGDPSGKSLERPELDVQTLENNSRAIKQLISKILGKSPGASAKDAILDAD 794
VA+IGGATGRVGDPSGKSLERPELD++TLENNSRAIKQLISKILG S AKDAILD
Sbjct: 107 VAVIGGATGRVGDPSGKSLERPELDIETLENNSRAIKQLISKILGNSAEGFAKDAILDVG 166
Query: 793 S 791
S
Sbjct: 167 S 167
>ref|XP_020100830.1| tyrosine--tRNA ligase, chloroplastic/mitochondrial [Ananas comosus]
Length = 513
Score = 83.2 bits (204), Expect = 8e-14
Identities = 44/72 (61%), Positives = 54/72 (75%), Gaps = 9/72 (12%)
Frame = -3
Query: 976 AVALIGGATGRVGDPSGKSLERPELDVQTLENNSRAIKQLISKILGKSPGASA------- 818
AVA+IGGATGRVGDPSGKS+ERPELD+ TLE NS IK +I+KILG++ G S+
Sbjct: 129 AVAVIGGATGRVGDPSGKSIERPELDLGTLEKNSEGIKSIIAKILGRNAGHSSLGVGSEN 188
Query: 817 --KDAILDADSL 788
KDAIL + S+
Sbjct: 189 GGKDAILSSSSM 200
>ref|XP_008801775.1| PREDICTED: tyrosine--tRNA ligase, chloroplastic/mitochondrial-like
[Phoenix dactylifera]
Length = 544
Score = 82.8 bits (203), Expect = 1e-13
Identities = 43/64 (67%), Positives = 49/64 (76%), Gaps = 2/64 (3%)
Frame = -3
Query: 976 AVALIGGATGRVGDPSGKSLERPELDVQTLENNSRAIKQLISKIL--GKSPGASAKDAIL 803
AVA+IGGATGR+GDPSGKSLERPELD++TLE NS IK LISKIL G S + K+ L
Sbjct: 130 AVAVIGGATGRIGDPSGKSLERPELDIETLEKNSAGIKNLISKILGGGNSDAGTGKEKAL 189
Query: 802 DADS 791
D S
Sbjct: 190 DVGS 193
>ref|XP_009414004.1| PREDICTED: tyrosine--tRNA ligase, chloroplastic/mitochondrial [Musa
acuminata subsp. malaccensis]
ref|XP_018686097.1| PREDICTED: tyrosine--tRNA ligase, chloroplastic/mitochondrial [Musa
acuminata subsp. malaccensis]
Length = 535
Score = 82.4 bits (202), Expect = 2e-13
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = -3
Query: 976 AVALIGGATGRVGDPSGKSLERPELDVQTLENNSRAIKQLISKILGKSPG 827
AVALIGGATGRVGDPSGKSLERPELDV+TL+ NS +IK LISKILG+ G
Sbjct: 138 AVALIGGATGRVGDPSGKSLERPELDVETLDKNSASIKDLISKILGRRGG 187
>ref|XP_010500171.1| PREDICTED: tyrosine--tRNA ligase, chloroplastic/mitochondrial-like
isoform X2 [Camelina sativa]
Length = 505
Score = 81.3 bits (199), Expect = 4e-13
Identities = 41/64 (64%), Positives = 47/64 (73%)
Frame = -3
Query: 976 AVALIGGATGRVGDPSGKSLERPELDVQTLENNSRAIKQLISKILGKSPGASAKDAILDA 797
AV LIGGATGRVGDPSGKSLERPELD TLE N IK++I KILG +P +S+ IL+
Sbjct: 143 AVGLIGGATGRVGDPSGKSLERPELDADTLEKNISGIKKIIIKILGSNPSSSSSYMILNN 202
Query: 796 DSLW 785
W
Sbjct: 203 YDWW 206
>ref|XP_010485586.1| PREDICTED: tyrosine--tRNA ligase, chloroplastic/mitochondrial-like
[Camelina sativa]
ref|XP_010485587.1| PREDICTED: tyrosine--tRNA ligase, chloroplastic/mitochondrial-like
[Camelina sativa]
Length = 511
Score = 81.3 bits (199), Expect = 4e-13
Identities = 41/64 (64%), Positives = 47/64 (73%)
Frame = -3
Query: 976 AVALIGGATGRVGDPSGKSLERPELDVQTLENNSRAIKQLISKILGKSPGASAKDAILDA 797
AV LIGGATGRVGDPSGKSLERPELD TLE N IK++I KILG +P +S+ IL+
Sbjct: 149 AVGLIGGATGRVGDPSGKSLERPELDADTLEKNIAGIKKIIIKILGSNPSSSSSYMILNN 208
Query: 796 DSLW 785
W
Sbjct: 209 YDWW 212
>ref|XP_010500039.1| PREDICTED: tyrosine--tRNA ligase, chloroplastic/mitochondrial-like
isoform X1 [Camelina sativa]
ref|XP_010500108.1| PREDICTED: tyrosine--tRNA ligase, chloroplastic/mitochondrial-like
isoform X1 [Camelina sativa]
Length = 511
Score = 81.3 bits (199), Expect = 4e-13
Identities = 41/64 (64%), Positives = 47/64 (73%)
Frame = -3
Query: 976 AVALIGGATGRVGDPSGKSLERPELDVQTLENNSRAIKQLISKILGKSPGASAKDAILDA 797
AV LIGGATGRVGDPSGKSLERPELD TLE N IK++I KILG +P +S+ IL+
Sbjct: 149 AVGLIGGATGRVGDPSGKSLERPELDADTLEKNISGIKKIIIKILGSNPSSSSSYMILNN 208
Query: 796 DSLW 785
W
Sbjct: 209 YDWW 212
>gb|OAY62593.1| Tyrosine--tRNA ligase, chloroplastic/mitochondrial [Ananas comosus]
Length = 517
Score = 81.3 bits (199), Expect = 4e-13
Identities = 43/72 (59%), Positives = 53/72 (73%), Gaps = 9/72 (12%)
Frame = -3
Query: 976 AVALIGGATGRVGDPSGKSLERPELDVQTLENNSRAIKQLISKILGKSPGASA------- 818
AVA+IGGATGRVGDPSGKS+ERPELD+ TLE NS I +I+KILG++ G S+
Sbjct: 133 AVAVIGGATGRVGDPSGKSIERPELDLGTLEKNSEGINSIIAKILGRNAGHSSLGVGSEN 192
Query: 817 --KDAILDADSL 788
KDAIL + S+
Sbjct: 193 GGKDAILSSSSM 204
>ref|XP_010927782.1| PREDICTED: tyrosine--tRNA ligase, chloroplastic/mitochondrial
[Elaeis guineensis]
Length = 544
Score = 80.1 bits (196), Expect = 9e-13
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = -3
Query: 976 AVALIGGATGRVGDPSGKSLERPELDVQTLENNSRAIKQLISKILG 839
AVA+IGGATGR+GDPSGKSLERPELDV+TLE NS IK LISKILG
Sbjct: 130 AVAMIGGATGRIGDPSGKSLERPELDVETLEKNSAGIKNLISKILG 175
>ref|XP_010463686.1| PREDICTED: tyrosine--tRNA ligase, chloroplastic/mitochondrial
[Camelina sativa]
ref|XP_010463687.1| PREDICTED: tyrosine--tRNA ligase, chloroplastic/mitochondrial
[Camelina sativa]
Length = 511
Score = 79.7 bits (195), Expect = 1e-12
Identities = 40/64 (62%), Positives = 46/64 (71%)
Frame = -3
Query: 976 AVALIGGATGRVGDPSGKSLERPELDVQTLENNSRAIKQLISKILGKSPGASAKDAILDA 797
AV LIGGATGRVGDPSGKSLERPELD TLE N IK++I KILG +P + + IL+
Sbjct: 149 AVGLIGGATGRVGDPSGKSLERPELDADTLEKNIAGIKKIIIKILGSNPSSGSSYMILNN 208
Query: 796 DSLW 785
W
Sbjct: 209 YDWW 212
>ref|XP_023641509.1| tyrosine--tRNA ligase, chloroplastic/mitochondrial [Capsella
rubella]
ref|XP_023641510.1| tyrosine--tRNA ligase, chloroplastic/mitochondrial [Capsella
rubella]
ref|XP_023641512.1| tyrosine--tRNA ligase, chloroplastic/mitochondrial [Capsella
rubella]
ref|XP_006297370.2| tyrosine--tRNA ligase, chloroplastic/mitochondrial [Capsella
rubella]
Length = 511
Score = 77.8 bits (190), Expect = 5e-12
Identities = 39/64 (60%), Positives = 45/64 (70%)
Frame = -3
Query: 976 AVALIGGATGRVGDPSGKSLERPELDVQTLENNSRAIKQLISKILGKSPGASAKDAILDA 797
AV LIGGATGRVGDPSGKSLERPELD TL+ N IK++I KILG +P + IL+
Sbjct: 149 AVGLIGGATGRVGDPSGKSLERPELDADTLDKNIAGIKKIIIKILGSNPSPGSSYMILNN 208
Query: 796 DSLW 785
W
Sbjct: 209 YDWW 212
>gb|EOA30268.1| hypothetical protein CARUB_v10013389mg, partial [Capsella rubella]
Length = 548
Score = 77.8 bits (190), Expect = 5e-12
Identities = 39/64 (60%), Positives = 45/64 (70%)
Frame = -3
Query: 976 AVALIGGATGRVGDPSGKSLERPELDVQTLENNSRAIKQLISKILGKSPGASAKDAILDA 797
AV LIGGATGRVGDPSGKSLERPELD TL+ N IK++I KILG +P + IL+
Sbjct: 186 AVGLIGGATGRVGDPSGKSLERPELDADTLDKNIAGIKKIIIKILGSNPSPGSSYMILNN 245
Query: 796 DSLW 785
W
Sbjct: 246 YDWW 249
>ref|XP_002884331.1| tyrosine--tRNA ligase, chloroplastic/mitochondrial [Arabidopsis
lyrata subsp. lyrata]
ref|XP_020887114.1| tyrosine--tRNA ligase, chloroplastic/mitochondrial [Arabidopsis
lyrata subsp. lyrata]
gb|EFH60590.1| tRNA synthetase class I family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 511
Score = 77.4 bits (189), Expect = 7e-12
Identities = 39/64 (60%), Positives = 44/64 (68%)
Frame = -3
Query: 976 AVALIGGATGRVGDPSGKSLERPELDVQTLENNSRAIKQLISKILGKSPGASAKDAILDA 797
AV LIGGATGRVGDPSGKSLERPELD TLE N IK++I KILG +P + I +
Sbjct: 149 AVGLIGGATGRVGDPSGKSLERPELDADTLEKNIAGIKRIIIKILGGNPSSGGSYVIFNN 208
Query: 796 DSLW 785
W
Sbjct: 209 YDWW 212
>gb|PKA46071.1| tyrosyl-tRNA synthetase [Apostasia shenzhenica]
Length = 508
Score = 77.0 bits (188), Expect = 9e-12
Identities = 41/67 (61%), Positives = 50/67 (74%), Gaps = 6/67 (8%)
Frame = -3
Query: 973 VALIGGATGRVGDPSGKSLERPELDVQTLENNSRAIKQLISKILGKSPG------ASAKD 812
+ALIGGATGRVGDPSGKS+ERPELDV+T+ENN I+ LI ILG++ S K
Sbjct: 128 IALIGGATGRVGDPSGKSIERPELDVETIENNCAGIRALIYGILGRTCSKRDLSLGSIKK 187
Query: 811 AILDADS 791
AIL++DS
Sbjct: 188 AILNSDS 194
>ref|XP_003574045.1| PREDICTED: tyrosine--tRNA ligase, chloroplastic/mitochondrial-like
[Brachypodium distachyon]
gb|KQJ97056.1| hypothetical protein BRADI_3g28520v3 [Brachypodium distachyon]
Length = 512
Score = 77.0 bits (188), Expect = 9e-12
Identities = 41/64 (64%), Positives = 49/64 (76%), Gaps = 5/64 (7%)
Frame = -3
Query: 976 AVALIGGATGRVGDPSGKSLERPELDVQTLENNSRAIKQLISKILGKSP-----GASAKD 812
AVAL+GGATGRVGDPSGKS ERPELD+ + NS AIK LI++ILG++P S K+
Sbjct: 118 AVALVGGATGRVGDPSGKSAERPELDLAAVAANSDAIKSLIAQILGRAPEPSHYSKSGKN 177
Query: 811 AILD 800
AILD
Sbjct: 178 AILD 181
>gb|KQK15695.2| hypothetical protein BRADI_1g24431v3, partial [Brachypodium
distachyon]
Length = 590
Score = 77.0 bits (188), Expect = 1e-11
Identities = 41/64 (64%), Positives = 49/64 (76%), Gaps = 5/64 (7%)
Frame = -3
Query: 976 AVALIGGATGRVGDPSGKSLERPELDVQTLENNSRAIKQLISKILGKSP-----GASAKD 812
AVAL+GGATGRVGDPSGKS ERPELD+ + NS AIK LI++ILG++P S K+
Sbjct: 254 AVALVGGATGRVGDPSGKSAERPELDLAAVAANSDAIKSLIAQILGRAPEPSHYSKSGKN 313
Query: 811 AILD 800
AILD
Sbjct: 314 AILD 317
>gb|PON92591.1| Tyrosine-tRNA ligase, bacterial-type [Trema orientalis]
Length = 501
Score = 76.6 bits (187), Expect = 1e-11
Identities = 36/49 (73%), Positives = 44/49 (89%)
Frame = -3
Query: 976 AVALIGGATGRVGDPSGKSLERPELDVQTLENNSRAIKQLISKILGKSP 830
AVALIGGAT RVGDPSGKSLERPELD +TL NN++ I ++IS+ILG++P
Sbjct: 133 AVALIGGATARVGDPSGKSLERPELDPETLVNNTKGITEIISRILGRTP 181
>ref|XP_020173181.1| tyrosine--tRNA ligase, chloroplastic/mitochondrial [Aegilops
tauschii subsp. tauschii]
Length = 512
Score = 76.3 bits (186), Expect = 2e-11
Identities = 41/64 (64%), Positives = 48/64 (75%), Gaps = 5/64 (7%)
Frame = -3
Query: 976 AVALIGGATGRVGDPSGKSLERPELDVQTLENNSRAIKQLISKILGKSP-----GASAKD 812
AVAL+GGATGRVGDPSGKS ERPELD+ + NS AIK LI++IL ++P G S K
Sbjct: 115 AVALVGGATGRVGDPSGKSAERPELDLAAVVANSDAIKSLIAQILSRAPEPSHHGQSGKS 174
Query: 811 AILD 800
AILD
Sbjct: 175 AILD 178
>ref|XP_008783116.1| PREDICTED: tyrosine--tRNA ligase, chloroplastic/mitochondrial-like
[Phoenix dactylifera]
Length = 543
Score = 75.9 bits (185), Expect = 2e-11
Identities = 41/64 (64%), Positives = 47/64 (73%), Gaps = 2/64 (3%)
Frame = -3
Query: 976 AVALIGGATGRVGDPSGKSLERPELDVQTLENNSRAIKQLISKIL--GKSPGASAKDAIL 803
AVA+IGGATG +GDPSGKSLERPELDV+TLE NS IK +ISKIL S + K+ L
Sbjct: 129 AVAVIGGATGCIGDPSGKSLERPELDVETLEKNSAGIKNIISKILRDENSVAGTGKEKAL 188
Query: 802 DADS 791
D S
Sbjct: 189 DVGS 192