BLASTX nr result
ID: Ophiopogon25_contig00011784
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00011784
(541 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020256373.1| mediator of RNA polymerase II transcription ... 148 8e-42
ref|XP_020256372.1| mediator of RNA polymerase II transcription ... 148 1e-41
ref|XP_017700136.1| PREDICTED: mediator of RNA polymerase II tra... 140 1e-38
ref|XP_008800293.1| PREDICTED: mediator of RNA polymerase II tra... 140 1e-38
ref|XP_019702908.1| PREDICTED: mediator of RNA polymerase II tra... 139 6e-38
ref|XP_010909088.1| PREDICTED: mediator of RNA polymerase II tra... 139 6e-38
ref|XP_020103598.1| mediator of RNA polymerase II transcription ... 136 5e-37
ref|XP_020103597.1| mediator of RNA polymerase II transcription ... 136 5e-37
ref|XP_018679922.1| PREDICTED: mediator of RNA polymerase II tra... 135 6e-37
ref|XP_020103596.1| mediator of RNA polymerase II transcription ... 136 6e-37
ref|XP_020103595.1| mediator of RNA polymerase II transcription ... 136 6e-37
ref|XP_020103593.1| mediator of RNA polymerase II transcription ... 136 7e-37
ref|XP_020103592.1| mediator of RNA polymerase II transcription ... 136 8e-37
ref|XP_018679921.1| PREDICTED: mediator of RNA polymerase II tra... 135 1e-36
gb|PKA50862.1| Mediator of RNA polymerase II transcription subun... 135 2e-36
ref|XP_009397400.1| PREDICTED: mediator of RNA polymerase II tra... 135 2e-36
gb|OMO68067.1| putative RNA binding protein [Corchorus olitorius] 129 3e-35
gb|KJB06939.1| hypothetical protein B456_001G226200 [Gossypium r... 132 3e-35
ref|XP_021321589.1| mediator of RNA polymerase II transcription ... 131 5e-35
ref|XP_021321588.1| probable mediator of RNA polymerase II trans... 131 6e-35
>ref|XP_020256373.1| mediator of RNA polymerase II transcription subunit 19a-like
isoform X2 [Asparagus officinalis]
Length = 193
Score = 148 bits (373), Expect = 8e-42
Identities = 68/75 (90%), Positives = 73/75 (97%)
Frame = +2
Query: 2 VDLISHYRLLPHHDFFCKRALPLAISDTHYLHNVVGDTEIRKGEGMELDQLLQTAPYLRE 181
VDLISHY+L+ HHDFFCKR+LPL+ISDTHYLHNVVGDTEIRKGEGMELDQL QTAPYLRE
Sbjct: 18 VDLISHYKLVAHHDFFCKRSLPLSISDTHYLHNVVGDTEIRKGEGMELDQLFQTAPYLRE 77
Query: 182 TTAHIQPFDLDALGQ 226
TTAHIQPFDLD+LGQ
Sbjct: 78 TTAHIQPFDLDSLGQ 92
>ref|XP_020256372.1| mediator of RNA polymerase II transcription subunit 19a-like
isoform X1 [Asparagus officinalis]
gb|ONK74557.1| uncharacterized protein A4U43_C03F7640 [Asparagus officinalis]
Length = 205
Score = 148 bits (373), Expect = 1e-41
Identities = 68/75 (90%), Positives = 73/75 (97%)
Frame = +2
Query: 2 VDLISHYRLLPHHDFFCKRALPLAISDTHYLHNVVGDTEIRKGEGMELDQLLQTAPYLRE 181
VDLISHY+L+ HHDFFCKR+LPL+ISDTHYLHNVVGDTEIRKGEGMELDQL QTAPYLRE
Sbjct: 18 VDLISHYKLVAHHDFFCKRSLPLSISDTHYLHNVVGDTEIRKGEGMELDQLFQTAPYLRE 77
Query: 182 TTAHIQPFDLDALGQ 226
TTAHIQPFDLD+LGQ
Sbjct: 78 TTAHIQPFDLDSLGQ 92
>ref|XP_017700136.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like isoform X2 [Phoenix dactylifera]
Length = 200
Score = 140 bits (353), Expect = 1e-38
Identities = 64/75 (85%), Positives = 70/75 (93%)
Frame = +2
Query: 2 VDLISHYRLLPHHDFFCKRALPLAISDTHYLHNVVGDTEIRKGEGMELDQLLQTAPYLRE 181
VDLI+HY+L HHDFFCKR+LPL+ISDTHYLHNVVGDTEIRKG+GMELDQL Q APYLRE
Sbjct: 19 VDLINHYKLWAHHDFFCKRSLPLSISDTHYLHNVVGDTEIRKGDGMELDQLFQNAPYLRE 78
Query: 182 TTAHIQPFDLDALGQ 226
TTAHI+PFDLD LGQ
Sbjct: 79 TTAHIRPFDLDILGQ 93
>ref|XP_008800293.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like isoform X1 [Phoenix dactylifera]
Length = 212
Score = 140 bits (353), Expect = 1e-38
Identities = 64/75 (85%), Positives = 70/75 (93%)
Frame = +2
Query: 2 VDLISHYRLLPHHDFFCKRALPLAISDTHYLHNVVGDTEIRKGEGMELDQLLQTAPYLRE 181
VDLI+HY+L HHDFFCKR+LPL+ISDTHYLHNVVGDTEIRKG+GMELDQL Q APYLRE
Sbjct: 19 VDLINHYKLWAHHDFFCKRSLPLSISDTHYLHNVVGDTEIRKGDGMELDQLFQNAPYLRE 78
Query: 182 TTAHIQPFDLDALGQ 226
TTAHI+PFDLD LGQ
Sbjct: 79 TTAHIRPFDLDILGQ 93
>ref|XP_019702908.1| PREDICTED: mediator of RNA polymerase II transcription subunit 19a
[Elaeis guineensis]
Length = 212
Score = 139 bits (349), Expect = 6e-38
Identities = 64/75 (85%), Positives = 70/75 (93%)
Frame = +2
Query: 2 VDLISHYRLLPHHDFFCKRALPLAISDTHYLHNVVGDTEIRKGEGMELDQLLQTAPYLRE 181
VDLI+HY+L HHDFFCKR LPL+ISDTHYLHNVVGDTEIRKGEGMELDQL Q+APYLRE
Sbjct: 19 VDLINHYKLWAHHDFFCKRTLPLSISDTHYLHNVVGDTEIRKGEGMELDQLFQSAPYLRE 78
Query: 182 TTAHIQPFDLDALGQ 226
TTA+I+PFDLD LGQ
Sbjct: 79 TTANIRPFDLDILGQ 93
>ref|XP_010909088.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like [Elaeis guineensis]
Length = 212
Score = 139 bits (349), Expect = 6e-38
Identities = 64/75 (85%), Positives = 69/75 (92%)
Frame = +2
Query: 2 VDLISHYRLLPHHDFFCKRALPLAISDTHYLHNVVGDTEIRKGEGMELDQLLQTAPYLRE 181
VDLI+HY+LL HHDFFCKR LPL+ISDTHYLHN+VGDTEIRKGEGMELDQL Q AP LRE
Sbjct: 19 VDLINHYKLLAHHDFFCKRTLPLSISDTHYLHNMVGDTEIRKGEGMELDQLFQNAPNLRE 78
Query: 182 TTAHIQPFDLDALGQ 226
TTAHIQPFDLD LG+
Sbjct: 79 TTAHIQPFDLDILGK 93
>ref|XP_020103598.1| mediator of RNA polymerase II transcription subunit 19a isoform X6
[Ananas comosus]
Length = 205
Score = 136 bits (342), Expect = 5e-37
Identities = 63/75 (84%), Positives = 67/75 (89%)
Frame = +2
Query: 2 VDLISHYRLLPHHDFFCKRALPLAISDTHYLHNVVGDTEIRKGEGMELDQLLQTAPYLRE 181
VDLISHY+LL HHDFFCKR+LP++ISDTHYLHNVVGDTEIRKGEGMELDQL Q PYLRE
Sbjct: 19 VDLISHYKLLAHHDFFCKRSLPVSISDTHYLHNVVGDTEIRKGEGMELDQLFQNTPYLRE 78
Query: 182 TTAHIQPFDLDALGQ 226
T A IQ FDLD LGQ
Sbjct: 79 TAARIQQFDLDTLGQ 93
>ref|XP_020103597.1| mediator of RNA polymerase II transcription subunit 19a isoform X5
[Ananas comosus]
Length = 207
Score = 136 bits (342), Expect = 5e-37
Identities = 63/75 (84%), Positives = 67/75 (89%)
Frame = +2
Query: 2 VDLISHYRLLPHHDFFCKRALPLAISDTHYLHNVVGDTEIRKGEGMELDQLLQTAPYLRE 181
VDLISHY+LL HHDFFCKR+LP++ISDTHYLHNVVGDTEIRKGEGMELDQL Q PYLRE
Sbjct: 19 VDLISHYKLLAHHDFFCKRSLPVSISDTHYLHNVVGDTEIRKGEGMELDQLFQNTPYLRE 78
Query: 182 TTAHIQPFDLDALGQ 226
T A IQ FDLD LGQ
Sbjct: 79 TAARIQQFDLDTLGQ 93
>ref|XP_018679922.1| PREDICTED: mediator of RNA polymerase II transcription subunit 19a
isoform X3 [Musa acuminata subsp. malaccensis]
Length = 183
Score = 135 bits (340), Expect = 6e-37
Identities = 62/75 (82%), Positives = 68/75 (90%)
Frame = +2
Query: 2 VDLISHYRLLPHHDFFCKRALPLAISDTHYLHNVVGDTEIRKGEGMELDQLLQTAPYLRE 181
VDLI+HY+LL HHDFFCKR LPL+I DTHYLHNVVG+TEIRKGEGMELDQL APYLRE
Sbjct: 19 VDLINHYKLLTHHDFFCKRNLPLSILDTHYLHNVVGETEIRKGEGMELDQLFHNAPYLRE 78
Query: 182 TTAHIQPFDLDALGQ 226
+TAHIQPFDL+ LGQ
Sbjct: 79 STAHIQPFDLELLGQ 93
>ref|XP_020103596.1| mediator of RNA polymerase II transcription subunit 19a isoform X4
[Ananas comosus]
Length = 208
Score = 136 bits (342), Expect = 6e-37
Identities = 63/75 (84%), Positives = 67/75 (89%)
Frame = +2
Query: 2 VDLISHYRLLPHHDFFCKRALPLAISDTHYLHNVVGDTEIRKGEGMELDQLLQTAPYLRE 181
VDLISHY+LL HHDFFCKR+LP++ISDTHYLHNVVGDTEIRKGEGMELDQL Q PYLRE
Sbjct: 19 VDLISHYKLLAHHDFFCKRSLPVSISDTHYLHNVVGDTEIRKGEGMELDQLFQNTPYLRE 78
Query: 182 TTAHIQPFDLDALGQ 226
T A IQ FDLD LGQ
Sbjct: 79 TAARIQQFDLDTLGQ 93
>ref|XP_020103595.1| mediator of RNA polymerase II transcription subunit 19a isoform X3
[Ananas comosus]
gb|OAY74958.1| Mediator of RNA polymerase II transcription subunit 19a [Ananas
comosus]
Length = 211
Score = 136 bits (342), Expect = 6e-37
Identities = 63/75 (84%), Positives = 67/75 (89%)
Frame = +2
Query: 2 VDLISHYRLLPHHDFFCKRALPLAISDTHYLHNVVGDTEIRKGEGMELDQLLQTAPYLRE 181
VDLISHY+LL HHDFFCKR+LP++ISDTHYLHNVVGDTEIRKGEGMELDQL Q PYLRE
Sbjct: 19 VDLISHYKLLAHHDFFCKRSLPVSISDTHYLHNVVGDTEIRKGEGMELDQLFQNTPYLRE 78
Query: 182 TTAHIQPFDLDALGQ 226
T A IQ FDLD LGQ
Sbjct: 79 TAARIQQFDLDTLGQ 93
>ref|XP_020103593.1| mediator of RNA polymerase II transcription subunit 19a isoform X2
[Ananas comosus]
Length = 214
Score = 136 bits (342), Expect = 7e-37
Identities = 63/75 (84%), Positives = 67/75 (89%)
Frame = +2
Query: 2 VDLISHYRLLPHHDFFCKRALPLAISDTHYLHNVVGDTEIRKGEGMELDQLLQTAPYLRE 181
VDLISHY+LL HHDFFCKR+LP++ISDTHYLHNVVGDTEIRKGEGMELDQL Q PYLRE
Sbjct: 19 VDLISHYKLLAHHDFFCKRSLPVSISDTHYLHNVVGDTEIRKGEGMELDQLFQNTPYLRE 78
Query: 182 TTAHIQPFDLDALGQ 226
T A IQ FDLD LGQ
Sbjct: 79 TAARIQQFDLDTLGQ 93
>ref|XP_020103592.1| mediator of RNA polymerase II transcription subunit 19a isoform X1
[Ananas comosus]
Length = 219
Score = 136 bits (342), Expect = 8e-37
Identities = 63/75 (84%), Positives = 67/75 (89%)
Frame = +2
Query: 2 VDLISHYRLLPHHDFFCKRALPLAISDTHYLHNVVGDTEIRKGEGMELDQLLQTAPYLRE 181
VDLISHY+LL HHDFFCKR+LP++ISDTHYLHNVVGDTEIRKGEGMELDQL Q PYLRE
Sbjct: 19 VDLISHYKLLAHHDFFCKRSLPVSISDTHYLHNVVGDTEIRKGEGMELDQLFQNTPYLRE 78
Query: 182 TTAHIQPFDLDALGQ 226
T A IQ FDLD LGQ
Sbjct: 79 TAARIQQFDLDTLGQ 93
>ref|XP_018679921.1| PREDICTED: mediator of RNA polymerase II transcription subunit 19a
isoform X2 [Musa acuminata subsp. malaccensis]
Length = 206
Score = 135 bits (340), Expect = 1e-36
Identities = 62/75 (82%), Positives = 68/75 (90%)
Frame = +2
Query: 2 VDLISHYRLLPHHDFFCKRALPLAISDTHYLHNVVGDTEIRKGEGMELDQLLQTAPYLRE 181
VDLI+HY+LL HHDFFCKR LPL+I DTHYLHNVVG+TEIRKGEGMELDQL APYLRE
Sbjct: 19 VDLINHYKLLTHHDFFCKRNLPLSILDTHYLHNVVGETEIRKGEGMELDQLFHNAPYLRE 78
Query: 182 TTAHIQPFDLDALGQ 226
+TAHIQPFDL+ LGQ
Sbjct: 79 STAHIQPFDLELLGQ 93
>gb|PKA50862.1| Mediator of RNA polymerase II transcription subunit 19a [Apostasia
shenzhenica]
Length = 208
Score = 135 bits (339), Expect = 2e-36
Identities = 63/75 (84%), Positives = 68/75 (90%)
Frame = +2
Query: 2 VDLISHYRLLPHHDFFCKRALPLAISDTHYLHNVVGDTEIRKGEGMELDQLLQTAPYLRE 181
VDLISHY+LL HHDFFCK++LP +ISDTHYLHNVVGDTEIRKGEGMELDQL Q APY RE
Sbjct: 19 VDLISHYKLLGHHDFFCKKSLPPSISDTHYLHNVVGDTEIRKGEGMELDQLFQNAPYFRE 78
Query: 182 TTAHIQPFDLDALGQ 226
TTA+IQ FDL ALGQ
Sbjct: 79 TTAYIQTFDLQALGQ 93
>ref|XP_009397400.1| PREDICTED: mediator of RNA polymerase II transcription subunit 19a
isoform X1 [Musa acuminata subsp. malaccensis]
Length = 227
Score = 135 bits (340), Expect = 2e-36
Identities = 62/75 (82%), Positives = 68/75 (90%)
Frame = +2
Query: 2 VDLISHYRLLPHHDFFCKRALPLAISDTHYLHNVVGDTEIRKGEGMELDQLLQTAPYLRE 181
VDLI+HY+LL HHDFFCKR LPL+I DTHYLHNVVG+TEIRKGEGMELDQL APYLRE
Sbjct: 19 VDLINHYKLLTHHDFFCKRNLPLSILDTHYLHNVVGETEIRKGEGMELDQLFHNAPYLRE 78
Query: 182 TTAHIQPFDLDALGQ 226
+TAHIQPFDL+ LGQ
Sbjct: 79 STAHIQPFDLELLGQ 93
>gb|OMO68067.1| putative RNA binding protein [Corchorus olitorius]
Length = 113
Score = 129 bits (323), Expect = 3e-35
Identities = 58/73 (79%), Positives = 66/73 (90%)
Frame = +2
Query: 2 VDLISHYRLLPHHDFFCKRALPLAISDTHYLHNVVGDTEIRKGEGMELDQLLQTAPYLRE 181
VDLISHY+LLPHHDFFCKR+LPL+I+DTHYLHNVVGDTEIRKGEGM+LDQL+Q + R+
Sbjct: 19 VDLISHYKLLPHHDFFCKRSLPLSIADTHYLHNVVGDTEIRKGEGMQLDQLIQNTSHNRD 78
Query: 182 TTAHIQPFDLDAL 220
T A IQPFDLD L
Sbjct: 79 TNARIQPFDLDVL 91
>gb|KJB06939.1| hypothetical protein B456_001G226200 [Gossypium raimondii]
Length = 215
Score = 132 bits (331), Expect = 3e-35
Identities = 65/103 (63%), Positives = 77/103 (74%), Gaps = 11/103 (10%)
Frame = +2
Query: 2 VDLISHYRLLPHHDFFCKRALPLAISDTHYLHNVVGDTEIRKGEGMELDQLLQTAPYLRE 181
VDLISHY+LLPHHDFFCKR LP++ISDTHYLHNVVGDTEIRKGEGM+LDQL+Q + R+
Sbjct: 19 VDLISHYKLLPHHDFFCKRPLPVSISDTHYLHNVVGDTEIRKGEGMQLDQLIQNTSHNRD 78
Query: 182 TTAHIQPFDLDALGQQ-----------KKGHLLLVGNQKVTLK 277
+ IQPFDLD L + G LLL+G+Q+V LK
Sbjct: 79 SNVRIQPFDLDILKEAFQLSETTPVELSVGFLLLLGSQRVKLK 121
>ref|XP_021321589.1| mediator of RNA polymerase II transcription subunit 19a-like
isoform X2 [Sorghum bicolor]
Length = 210
Score = 131 bits (329), Expect = 5e-35
Identities = 61/75 (81%), Positives = 69/75 (92%)
Frame = +2
Query: 2 VDLISHYRLLPHHDFFCKRALPLAISDTHYLHNVVGDTEIRKGEGMELDQLLQTAPYLRE 181
VDLISHY+LLPHHDFFCK+ LPLAISDTHYLHNVVGDTEIRKGEGMELDQL+Q A Y+R+
Sbjct: 12 VDLISHYKLLPHHDFFCKKPLPLAISDTHYLHNVVGDTEIRKGEGMELDQLVQNA-YMRD 70
Query: 182 TTAHIQPFDLDALGQ 226
A+IQPFD++ LGQ
Sbjct: 71 KPAYIQPFDMETLGQ 85
>ref|XP_021321588.1| probable mediator of RNA polymerase II transcription subunit 19b
isoform X1 [Sorghum bicolor]
gb|KXG23999.1| hypothetical protein SORBI_3008G170000 [Sorghum bicolor]
Length = 217
Score = 131 bits (329), Expect = 6e-35
Identities = 61/75 (81%), Positives = 69/75 (92%)
Frame = +2
Query: 2 VDLISHYRLLPHHDFFCKRALPLAISDTHYLHNVVGDTEIRKGEGMELDQLLQTAPYLRE 181
VDLISHY+LLPHHDFFCK+ LPLAISDTHYLHNVVGDTEIRKGEGMELDQL+Q A Y+R+
Sbjct: 19 VDLISHYKLLPHHDFFCKKPLPLAISDTHYLHNVVGDTEIRKGEGMELDQLVQNA-YMRD 77
Query: 182 TTAHIQPFDLDALGQ 226
A+IQPFD++ LGQ
Sbjct: 78 KPAYIQPFDMETLGQ 92