BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00011749
         (642 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP63120.1| Retrovirus-related Pol polyprotein from transposo...   319   e-104
gb|PRQ29843.1| putative RNA-directed DNA polymerase [Rosa chinen...   315   e-102
gb|KYP50580.1| Retrovirus-related Pol polyprotein from transposo...   311   e-101
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]         326   e-100
emb|CAN81756.1| hypothetical protein VITISV_020923 [Vitis vinifera]   297   3e-99
gb|PPS03068.1| hypothetical protein GOBAR_AA17590 [Gossypium bar...   311   1e-98
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]           321   2e-98
gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]            308   5e-98
gb|KYP76811.1| Retrovirus-related Pol polyprotein from transposo...   318   1e-97
gb|KYP76810.1| Retrovirus-related Pol polyprotein from transposo...   318   1e-97
gb|KYP59970.1| Retrovirus-related Pol polyprotein from transposo...   299   1e-97
gb|OTG37990.1| putative pleckstrin (PH) domain, Reverse transcri...   298   7e-97
ref|XP_017609491.1| PREDICTED: retrovirus-related Pol polyprotei...   313   2e-96
gb|PRQ60431.1| putative RNA-directed DNA polymerase [Rosa chinen...   315   4e-96
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   313   1e-95
gb|KYP31853.1| Retrovirus-related Pol polyprotein from transposo...   312   3e-95
gb|KYP52741.1| Retrovirus-related Pol polyprotein from transposo...   294   4e-95
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]      312   7e-95
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]   305   3e-93
gb|PKI73919.1| hypothetical protein CRG98_005683 [Punica granatum]    285   7e-93

>gb|KYP63120.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 501

 Score =  319 bits (817), Expect = e-104
 Identities = 156/214 (72%), Positives = 180/214 (84%)
 Frame = +1

Query: 1   KIEKLKKELSMSFEMKDLGSARQILGMSISRDRKTRRLWISQESYIEKVLERFSMQKAKP 180
           KI  LKK+LS SF MKDLG A+QILGM I+RDR  R LW+SQE YIEKVLE+F+M K KP
Sbjct: 192 KIAALKKDLSKSFAMKDLGPAKQILGMRITRDRSKRLLWLSQERYIEKVLEQFNMDKCKP 251

Query: 181 VSSPLASHFKLSSQQCPSTEIEKEEMKAVPYASAVGSLMYAMVCTRPDIAHAVGVVSRFI 360
           V++PLA HF+LSS+Q P++E E EEMK +PY+S VGSLMYAM+CTRPDIA+AVGVVSRF+
Sbjct: 252 VNTPLAGHFRLSSKQSPTSEREMEEMKKIPYSSVVGSLMYAMICTRPDIAYAVGVVSRFL 311

Query: 361 SNPGKEHWTAVKWIMRYLRGTTKANLCFGDRSHRLVCYSDADWAGDVDTRRSTSGYLVTF 540
           +NPG EHW AVKWI+RYLRGT+K  LCFG     L  Y+DAD AGD+D+R+STSGYL TF
Sbjct: 312 ANPGNEHWLAVKWILRYLRGTSKRCLCFGKGKPVLEGYTDADLAGDIDSRKSTSGYLTTF 371

Query: 541 AGGAVSWQSKLQKCVALSTTEAEYIAVTEASKEM 642
            GGAVSWQSKLQKCVALSTTEAEYIA TEA KEM
Sbjct: 372 VGGAVSWQSKLQKCVALSTTEAEYIAATEACKEM 405


>gb|PRQ29843.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 501

 Score =  315 bits (806), Expect = e-102
 Identities = 148/213 (69%), Positives = 182/213 (85%)
 Frame = +1

Query: 4   IEKLKKELSMSFEMKDLGSARQILGMSISRDRKTRRLWISQESYIEKVLERFSMQKAKPV 183
           I KLK +LS SF+MKDLG A+QILGM I+RDR+ ++LW+SQE Y+E+VLERF+M++AK V
Sbjct: 193 IRKLKADLSKSFDMKDLGPAKQILGMEITRDRQAKKLWLSQERYVERVLERFNMKEAKSV 252

Query: 184 SSPLASHFKLSSQQCPSTEIEKEEMKAVPYASAVGSLMYAMVCTRPDIAHAVGVVSRFIS 363
           SSPL +HFKLS   CP+T++EK++M  +PY+SAVGSLMYAMVCTRPDIAHAVGVVSR++S
Sbjct: 253 SSPLGNHFKLSRLSCPTTQVEKDKMAGIPYSSAVGSLMYAMVCTRPDIAHAVGVVSRYLS 312

Query: 364 NPGKEHWTAVKWIMRYLRGTTKANLCFGDRSHRLVCYSDADWAGDVDTRRSTSGYLVTFA 543
           NPG+EHW AVKWI++YLRGT+K  LCFG     L  ++DAD AGD+D R+STS YL TF+
Sbjct: 313 NPGREHWEAVKWILKYLRGTSKLCLCFGGSEPILEGFTDADLAGDLDNRKSTSAYLFTFS 372

Query: 544 GGAVSWQSKLQKCVALSTTEAEYIAVTEASKEM 642
           GGAVSWQSKLQKCVALSTTE+EY+A  EA KEM
Sbjct: 373 GGAVSWQSKLQKCVALSTTESEYLAANEAGKEM 405


>gb|KYP50580.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 478

 Score =  311 bits (797), Expect = e-101
 Identities = 149/214 (69%), Positives = 180/214 (84%)
 Frame = +1

Query: 1   KIEKLKKELSMSFEMKDLGSARQILGMSISRDRKTRRLWISQESYIEKVLERFSMQKAKP 180
           KI++LKK+L  SF MKD+G+A++ILG+SI RDRK ++LW+SQE YI+ VL+RF M+  K 
Sbjct: 218 KIDRLKKQLGESFSMKDMGAAKKILGISIIRDRKDKKLWLSQEHYIQNVLQRFHMENVKA 277

Query: 181 VSSPLASHFKLSSQQCPSTEIEKEEMKAVPYASAVGSLMYAMVCTRPDIAHAVGVVSRFI 360
           VS+PLA+HFKLS +QCPS E+EK  M  VPYA AVGSLMYAMVCTRPDIAHAVG VSRF+
Sbjct: 278 VSTPLAAHFKLSVKQCPSNEVEKINMSRVPYAYAVGSLMYAMVCTRPDIAHAVGTVSRFL 337

Query: 361 SNPGKEHWTAVKWIMRYLRGTTKANLCFGDRSHRLVCYSDADWAGDVDTRRSTSGYLVTF 540
           SNPG+EHW AVKWI+RYLRGT+   L FG     LV YSD+D AGD+D+R+STSGYLV F
Sbjct: 338 SNPGREHWNAVKWILRYLRGTSGLKLYFGGDKPTLVGYSDSDMAGDIDSRKSTSGYLVKF 397

Query: 541 AGGAVSWQSKLQKCVALSTTEAEYIAVTEASKEM 642
           AGG V+WQS+LQKCVALSTTEAE+IA+TEA KE+
Sbjct: 398 AGGVVAWQSRLQKCVALSTTEAEFIALTEACKEL 431


>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score =  326 bits (835), Expect = e-100
 Identities = 156/214 (72%), Positives = 185/214 (86%)
 Frame = +1

Query: 1    KIEKLKKELSMSFEMKDLGSARQILGMSISRDRKTRRLWISQESYIEKVLERFSMQKAKP 180
            +I++LK+ELS SF MKD+G A+QILGM I RDR+ ++LW+SQE YIEKVLERF M +AKP
Sbjct: 1019 RIQELKQELSKSFSMKDMGPAKQILGMKIIRDRQNKKLWLSQEKYIEKVLERFHMNEAKP 1078

Query: 181  VSSPLASHFKLSSQQCPSTEIEKEEMKAVPYASAVGSLMYAMVCTRPDIAHAVGVVSRFI 360
            VS+PL  HFKL  +QCPS+E EKEEM+ VPY+SAVGSLMYAMVCTRPDIAHAVGVVSRF+
Sbjct: 1079 VSTPLDMHFKLCKKQCPSSEKEKEEMQRVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFL 1138

Query: 361  SNPGKEHWTAVKWIMRYLRGTTKANLCFGDRSHRLVCYSDADWAGDVDTRRSTSGYLVTF 540
            SNPG+EHW AVKWI+RYLRGT+  +LCFG     L  Y+D+D AGD+DTR+STSGYL+T+
Sbjct: 1139 SNPGREHWDAVKWILRYLRGTSSLSLCFGTGKPILTGYTDSDMAGDIDTRKSTSGYLITY 1198

Query: 541  AGGAVSWQSKLQKCVALSTTEAEYIAVTEASKEM 642
            AGGAVSWQS+LQKCV LSTTEAE+IA  EASKEM
Sbjct: 1199 AGGAVSWQSRLQKCVDLSTTEAEFIASVEASKEM 1232


>emb|CAN81756.1| hypothetical protein VITISV_020923 [Vitis vinifera]
          Length = 256

 Score =  297 bits (761), Expect = 3e-99
 Identities = 151/214 (70%), Positives = 176/214 (82%)
 Frame = +1

Query: 1   KIEKLKKELSMSFEMKDLGSARQILGMSISRDRKTRRLWISQESYIEKVLERFSMQKAKP 180
           KI+KLKKELS SFEMKDLG A QIL + I +DR   +LW+SQESY+EKVL++F+M KAKP
Sbjct: 30  KIDKLKKELSKSFEMKDLGPASQILSIKIFQDRTNVKLWLSQESYMEKVLDKFNMGKAKP 89

Query: 181 VSSPLASHFKLSSQQCPSTEIEKEEMKAVPYASAVGSLMYAMVCTRPDIAHAVGVVSRFI 360
           VS PL SH KLSS+Q PS+E EKEEM+ VPYASAVGSLMY MVCTR DIAH V VV++F+
Sbjct: 90  VSYPLRSHLKLSSKQSPSSEKEKEEMRKVPYASAVGSLMYVMVCTRLDIAHVVRVVNKFL 149

Query: 361 SNPGKEHWTAVKWIMRYLRGTTKANLCFGDRSHRLVCYSDADWAGDVDTRRSTSGYLVTF 540
           SNP KEHW AVKWI R+LRGT+K  LCFG     LV  +DAD A DVD+R+STSGYL+TF
Sbjct: 150 SNPCKEHWAAVKWIHRFLRGTSKTCLCFGTNKLVLVRCTDADMARDVDSRKSTSGYLITF 209

Query: 541 AGGAVSWQSKLQKCVALSTTEAEYIAVTEASKEM 642
           +GGAVSWQS+LQK VALST E EYIA T+ASKE+
Sbjct: 210 SGGAVSWQSRLQKYVALSTMEVEYIAFTKASKEL 243


>gb|PPS03068.1| hypothetical protein GOBAR_AA17590 [Gossypium barbadense]
          Length = 770

 Score =  311 bits (798), Expect = 1e-98
 Identities = 146/214 (68%), Positives = 181/214 (84%)
 Frame = +1

Query: 1    KIEKLKKELSMSFEMKDLGSARQILGMSISRDRKTRRLWISQESYIEKVLERFSMQKAKP 180
            +IEKLK+ELS SF MKDLG  +QILG+ ++ DRK ++LW+SQE YIEKVL+RFSM KAK 
Sbjct: 466  RIEKLKQELSKSFAMKDLGPVKQILGIRLTHDRKAKKLWLSQERYIEKVLQRFSMDKAKA 525

Query: 181  VSSPLASHFKLSSQQCPSTEIEKEEMKAVPYASAVGSLMYAMVCTRPDIAHAVGVVSRFI 360
            V++P A HF+LS +  PSTE EKEEM+ +PY+S VGSLMY +VCTRPD+ +AVG VSRF+
Sbjct: 526  VNTPFAMHFRLSVKHSPSTEKEKEEMQKIPYSSTVGSLMYPIVCTRPDLTYAVGTVSRFL 585

Query: 361  SNPGKEHWTAVKWIMRYLRGTTKANLCFGDRSHRLVCYSDADWAGDVDTRRSTSGYLVTF 540
            SNPG+EHW A+KWIMRYLRGT+   LCFG+    LV Y+D+D AGD+D+RRSTSGYL+T+
Sbjct: 586  SNPGREHWNALKWIMRYLRGTSNMKLCFGNEKPVLVGYTDSDMAGDIDSRRSTSGYLITY 645

Query: 541  AGGAVSWQSKLQKCVALSTTEAEYIAVTEASKEM 642
            AGGAV+WQS+LQKCVALSTTE+E+IA TEA KEM
Sbjct: 646  AGGAVAWQSRLQKCVALSTTESEFIAATEACKEM 679


>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score =  321 bits (822), Expect = 2e-98
 Identities = 154/214 (71%), Positives = 186/214 (86%)
 Frame = +1

Query: 1    KIEKLKKELSMSFEMKDLGSARQILGMSISRDRKTRRLWISQESYIEKVLERFSMQKAKP 180
            +I  LK++LS  F MKDLG A+QILGM I RDR+ ++LW+SQE YIEKVL+RF+M+K K 
Sbjct: 1022 RINSLKEQLSKFFAMKDLGPAKQILGMRIMRDREAKKLWLSQEKYIEKVLQRFNMEKTKA 1081

Query: 181  VSSPLASHFKLSSQQCPSTEIEKEEMKAVPYASAVGSLMYAMVCTRPDIAHAVGVVSRFI 360
            VS PLA+HF+LS++Q PST+ E+ +M+ +PYASAVGSLMYAMVCTRPDIAHAVGVVSRF+
Sbjct: 1082 VSCPLANHFRLSTKQSPSTDDERRKMERIPYASAVGSLMYAMVCTRPDIAHAVGVVSRFL 1141

Query: 361  SNPGKEHWTAVKWIMRYLRGTTKANLCFGDRSHRLVCYSDADWAGDVDTRRSTSGYLVTF 540
            SNPGKEHW AVKWI+RYLRGT+K  LCFG+ +  LV Y+DAD AGDVD+R+STSGYL+ F
Sbjct: 1142 SNPGKEHWDAVKWILRYLRGTSKLCLCFGEDNPVLVGYTDADMAGDVDSRKSTSGYLINF 1201

Query: 541  AGGAVSWQSKLQKCVALSTTEAEYIAVTEASKEM 642
            +GGAVSWQSKLQKCVALSTTEAE+IA TEA KE+
Sbjct: 1202 SGGAVSWQSKLQKCVALSTTEAEFIAATEACKEL 1235


>gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]
          Length = 687

 Score =  308 bits (789), Expect = 5e-98
 Identities = 147/211 (69%), Positives = 178/211 (84%)
 Frame = +1

Query: 10   KLKKELSMSFEMKDLGSARQILGMSISRDRKTRRLWISQESYIEKVLERFSMQKAKPVSS 189
            +LK++LS SF+MKDLG A+QILGM I+RDRK  +LW+SQE+YIE+VLERF+M+ AKPV++
Sbjct: 384  RLKEDLSKSFDMKDLGPAKQILGMEIARDRKAGKLWLSQENYIERVLERFNMKNAKPVNT 443

Query: 190  PLASHFKLSSQQCPSTEIEKEEMKAVPYASAVGSLMYAMVCTRPDIAHAVGVVSRFISNP 369
            PLA+HFKLS + CP+TE EKE M  +PY+S VGSLMYAMVCTRPDIAHAVG+VSR+++NP
Sbjct: 444  PLAAHFKLSKRCCPTTEKEKESMSHIPYSSVVGSLMYAMVCTRPDIAHAVGLVSRYLANP 503

Query: 370  GKEHWTAVKWIMRYLRGTTKANLCFGDRSHRLVCYSDADWAGDVDTRRSTSGYLVTFAGG 549
             K HW AVKWI+RYLRGT+  +LCFG     L  ++DAD AGD+D R+STSGYL  FA G
Sbjct: 504  SKVHWEAVKWILRYLRGTSNLSLCFGGGEPILEGFTDADMAGDLDNRKSTSGYLFKFARG 563

Query: 550  AVSWQSKLQKCVALSTTEAEYIAVTEASKEM 642
            A+SWQSKLQKCVALSTTE EYIA  EASKEM
Sbjct: 564  AISWQSKLQKCVALSTTEVEYIAAVEASKEM 594


>gb|KYP76811.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1305

 Score =  318 bits (816), Expect = 1e-97
 Identities = 156/214 (72%), Positives = 181/214 (84%)
 Frame = +1

Query: 1    KIEKLKKELSMSFEMKDLGSARQILGMSISRDRKTRRLWISQESYIEKVLERFSMQKAKP 180
            KI  LKK+LS SF MKDLG A+QILGM I+RDR  R LW+SQE YIEKVLE+F+M K KP
Sbjct: 996  KIAALKKDLSKSFAMKDLGPAKQILGMRITRDRSKRLLWLSQERYIEKVLEQFNMDKCKP 1055

Query: 181  VSSPLASHFKLSSQQCPSTEIEKEEMKAVPYASAVGSLMYAMVCTRPDIAHAVGVVSRFI 360
            V++PLA HF+LSS+Q P++E E EEMK +PY+S VGSLMYAM+CTRPDIA+AVGVVSRF+
Sbjct: 1056 VNTPLAGHFRLSSKQSPTSEREMEEMKKIPYSSVVGSLMYAMICTRPDIAYAVGVVSRFL 1115

Query: 361  SNPGKEHWTAVKWIMRYLRGTTKANLCFGDRSHRLVCYSDADWAGDVDTRRSTSGYLVTF 540
            ++PG EHW AVKWI+RYLRGT+K  LCFG     L  Y+DAD AGD+D+R+STSGYL TF
Sbjct: 1116 ADPGNEHWLAVKWILRYLRGTSKRCLCFGKGKPVLQGYTDADLAGDIDSRKSTSGYLTTF 1175

Query: 541  AGGAVSWQSKLQKCVALSTTEAEYIAVTEASKEM 642
            AGGAVSWQSKLQKCVALSTTEAEYIA TEA KEM
Sbjct: 1176 AGGAVSWQSKLQKCVALSTTEAEYIAATEACKEM 1209


>gb|KYP76810.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1305

 Score =  318 bits (816), Expect = 1e-97
 Identities = 156/214 (72%), Positives = 181/214 (84%)
 Frame = +1

Query: 1    KIEKLKKELSMSFEMKDLGSARQILGMSISRDRKTRRLWISQESYIEKVLERFSMQKAKP 180
            KI  LKK+LS SF MKDLG A+QILGM I+RDR  R LW+SQE YIEKVLE+F+M K KP
Sbjct: 996  KIAALKKDLSKSFAMKDLGPAKQILGMRITRDRSKRLLWLSQERYIEKVLEQFNMDKCKP 1055

Query: 181  VSSPLASHFKLSSQQCPSTEIEKEEMKAVPYASAVGSLMYAMVCTRPDIAHAVGVVSRFI 360
            V++PLA HF+LSS+Q P++E E EEMK +PY+S VGSLMYAM+CTRPDIA+AVGVVSRF+
Sbjct: 1056 VNTPLAGHFRLSSKQSPTSEREMEEMKKIPYSSVVGSLMYAMICTRPDIAYAVGVVSRFL 1115

Query: 361  SNPGKEHWTAVKWIMRYLRGTTKANLCFGDRSHRLVCYSDADWAGDVDTRRSTSGYLVTF 540
            ++PG EHW AVKWI+RYLRGT+K  LCFG     L  Y+DAD AGD+D+R+STSGYL TF
Sbjct: 1116 ADPGNEHWLAVKWILRYLRGTSKRCLCFGKGKPVLQGYTDADLAGDIDSRKSTSGYLTTF 1175

Query: 541  AGGAVSWQSKLQKCVALSTTEAEYIAVTEASKEM 642
            AGGAVSWQSKLQKCVALSTTEAEYIA TEA KEM
Sbjct: 1176 AGGAVSWQSKLQKCVALSTTEAEYIAATEACKEM 1209


>gb|KYP59970.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 412

 Score =  299 bits (765), Expect = 1e-97
 Identities = 142/214 (66%), Positives = 178/214 (83%)
 Frame = +1

Query: 1   KIEKLKKELSMSFEMKDLGSARQILGMSISRDRKTRRLWISQESYIEKVLERFSMQKAKP 180
           +I++LKK+L  SF MKD+G+A+QILG+ I RDR+  +LW+SQE YI++VL+RF ++ AK 
Sbjct: 101 RIDRLKKKLGESFAMKDMGAAKQILGIRIIRDREKWKLWLSQEQYIKRVLQRFQIENAKA 160

Query: 181 VSSPLASHFKLSSQQCPSTEIEKEEMKAVPYASAVGSLMYAMVCTRPDIAHAVGVVSRFI 360
           VS+P A+HFKLS +Q PS + EK +M+ VPYASAVGSLMYAMVCTRP IAHAVG VSRF+
Sbjct: 161 VSTPFATHFKLSVKQSPSNKAEKLDMERVPYASAVGSLMYAMVCTRPYIAHAVGTVSRFL 220

Query: 361 SNPGKEHWTAVKWIMRYLRGTTKANLCFGDRSHRLVCYSDADWAGDVDTRRSTSGYLVTF 540
           SNPG+EHW +VKWI+RYL GT    LCFG     LV YSD+D AGDVD+R+STSGYL+ F
Sbjct: 221 SNPGREHWNSVKWILRYLHGTVDMKLCFGGDKPTLVGYSDSDMAGDVDSRKSTSGYLIKF 280

Query: 541 AGGAVSWQSKLQKCVALSTTEAEYIAVTEASKEM 642
           AGGAV+WQS+LQ+CV LSTTEAE+IA+TEA KE+
Sbjct: 281 AGGAVAWQSRLQRCVTLSTTEAEFIAITEACKEL 314


>gb|OTG37990.1| putative pleckstrin (PH) domain, Reverse transcriptase,
           RNA-dependent DNA polymerase [Helianthus annuus]
          Length = 436

 Score =  298 bits (762), Expect = 7e-97
 Identities = 148/214 (69%), Positives = 178/214 (83%)
 Frame = +1

Query: 1   KIEKLKKELSMSFEMKDLGSARQILGMSISRDRKTRRLWISQESYIEKVLERFSMQKAKP 180
           +I +LKKELS SF MKDLG A+QILG+ I+RDR +++L +SQE YIEKVL RF+M KAK 
Sbjct: 166 RIVQLKKELSKSFSMKDLGPAKQILGIRITRDRASKKLHMSQEQYIEKVLSRFNMAKAKA 225

Query: 181 VSSPLASHFKLSSQQCPSTEIEKEEMKAVPYASAVGSLMYAMVCTRPDIAHAVGVVSRFI 360
           VSSPL  +FKL+ + CPS++ E E+M  VPYASAVGSLMYAMVCTRPDIAHAVGVVSRF+
Sbjct: 226 VSSPLTPNFKLTDKDCPSSKEEIEDMDKVPYASAVGSLMYAMVCTRPDIAHAVGVVSRFL 285

Query: 361 SNPGKEHWTAVKWIMRYLRGTTKANLCFGDRSHRLVCYSDADWAGDVDTRRSTSGYLVTF 540
           SNPGK+HW AVKWI RYLRG++K  + FG+    LV Y+D+D AG+ D  +STSGYL+TF
Sbjct: 286 SNPGKKHWEAVKWIFRYLRGSSKLGITFGNGKPMLVGYTDSDLAGNKDNMKSTSGYLMTF 345

Query: 541 AGGAVSWQSKLQKCVALSTTEAEYIAVTEASKEM 642
           AGGAVSWQS+LQK VALSTTEAEY+A TEA KE+
Sbjct: 346 AGGAVSWQSRLQKYVALSTTEAEYVAATEACKEL 379


>ref|XP_017609491.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
            1-94 [Gossypium arboreum]
          Length = 1184

 Score =  313 bits (803), Expect = 2e-96
 Identities = 149/214 (69%), Positives = 183/214 (85%)
 Frame = +1

Query: 1    KIEKLKKELSMSFEMKDLGSARQILGMSISRDRKTRRLWISQESYIEKVLERFSMQKAKP 180
            +IEKLK+ELS SF MKDLG A+QILG+ ++RDRK ++LW+SQE YIEKVL++FSM KAK 
Sbjct: 875  RIEKLKQELSKSFAMKDLGPAKQILGIRLTRDRKAKKLWLSQERYIEKVLQKFSMDKAKA 934

Query: 181  VSSPLASHFKLSSQQCPSTEIEKEEMKAVPYASAVGSLMYAMVCTRPDIAHAVGVVSRFI 360
            V++P A HF+LS +  PSTE EKEEM+ +PY+SAVGSLMYAMVCTRPD+A+AVG VSRF+
Sbjct: 935  VNTPFAMHFRLSVKHSPSTEKEKEEMQKIPYSSAVGSLMYAMVCTRPDLAYAVGTVSRFL 994

Query: 361  SNPGKEHWTAVKWIMRYLRGTTKANLCFGDRSHRLVCYSDADWAGDVDTRRSTSGYLVTF 540
            SN G+EHW AVKWIMRYLRGT+   LCFG+     V Y+D+D AGD+D+RRSTSGYL+T+
Sbjct: 995  SNLGREHWNAVKWIMRYLRGTSNMKLCFGNEKPVTVGYTDSDMAGDIDSRRSTSGYLITY 1054

Query: 541  AGGAVSWQSKLQKCVALSTTEAEYIAVTEASKEM 642
            AGGAV+WQS+ QKCVALSTTE+E+IA TEA KEM
Sbjct: 1055 AGGAVAWQSRQQKCVALSTTESEFIAATEACKEM 1088


>gb|PRQ60431.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1340

 Score =  315 bits (806), Expect = 4e-96
 Identities = 148/213 (69%), Positives = 182/213 (85%)
 Frame = +1

Query: 4    IEKLKKELSMSFEMKDLGSARQILGMSISRDRKTRRLWISQESYIEKVLERFSMQKAKPV 183
            I KLK +LS SF+MKDLG A+QILGM I+RDR+ ++LW+SQE Y+E+VLERF+M++AK V
Sbjct: 1032 IHKLKADLSKSFDMKDLGPAKQILGMEITRDRQAKKLWLSQERYVERVLERFNMKEAKSV 1091

Query: 184  SSPLASHFKLSSQQCPSTEIEKEEMKAVPYASAVGSLMYAMVCTRPDIAHAVGVVSRFIS 363
            SSPL +HFKLS   CP+T++EK++M  +PY+SAVGSLMYAMVCTRPDIAHAVGVVSR++S
Sbjct: 1092 SSPLGNHFKLSRLSCPTTQVEKDKMAGIPYSSAVGSLMYAMVCTRPDIAHAVGVVSRYLS 1151

Query: 364  NPGKEHWTAVKWIMRYLRGTTKANLCFGDRSHRLVCYSDADWAGDVDTRRSTSGYLVTFA 543
            NPG+EHW AVKWI++YLRGT+K  LCFG     L  ++DAD AGD+D R+STS YL TF+
Sbjct: 1152 NPGREHWEAVKWILKYLRGTSKLCLCFGGSEPILEGFTDADLAGDLDNRKSTSAYLFTFS 1211

Query: 544  GGAVSWQSKLQKCVALSTTEAEYIAVTEASKEM 642
            GGAVSWQSKLQKCVALSTTE+EY+A  EA KEM
Sbjct: 1212 GGAVSWQSKLQKCVALSTTESEYLAANEAGKEM 1244


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease
 emb|CAA32025.1| unnamed protein product [Nicotiana tabacum]
          Length = 1328

 Score =  313 bits (802), Expect = 1e-95
 Identities = 153/213 (71%), Positives = 176/213 (82%)
 Frame = +1

Query: 4    IEKLKKELSMSFEMKDLGSARQILGMSISRDRKTRRLWISQESYIEKVLERFSMQKAKPV 183
            I KLK +LS SF+MKDLG A+QILGM I R+R +R+LW+SQE YIE+VLERF+M+ AKPV
Sbjct: 1022 IAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPV 1081

Query: 184  SSPLASHFKLSSQQCPSTEIEKEEMKAVPYASAVGSLMYAMVCTRPDIAHAVGVVSRFIS 363
            S+PLA H KLS + CP+T  EK  M  VPY+SAVGSLMYAMVCTRPDIAHAVGVVSRF+ 
Sbjct: 1082 STPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLE 1141

Query: 364  NPGKEHWTAVKWIMRYLRGTTKANLCFGDRSHRLVCYSDADWAGDVDTRRSTSGYLVTFA 543
            NPGKEHW AVKWI+RYLRGTT   LCFG     L  Y+DAD AGD+D R+S++GYL TF+
Sbjct: 1142 NPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFS 1201

Query: 544  GGAVSWQSKLQKCVALSTTEAEYIAVTEASKEM 642
            GGA+SWQSKLQKCVALSTTEAEYIA TE  KEM
Sbjct: 1202 GGAISWQSKLQKCVALSTTEAEYIAATETGKEM 1234


>gb|KYP31853.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1314

 Score =  312 bits (799), Expect = 3e-95
 Identities = 154/214 (71%), Positives = 177/214 (82%)
 Frame = +1

Query: 1    KIEKLKKELSMSFEMKDLGSARQILGMSISRDRKTRRLWISQESYIEKVLERFSMQKAKP 180
            KI  LKK LS SF MKDLGS ++ILGM I RDR  R LW+SQE YI+KVLERF+M  AK 
Sbjct: 1006 KIAALKKALSKSFAMKDLGSVKKILGMKIIRDRSKRMLWMSQEDYIKKVLERFNMHNAKS 1065

Query: 181  VSSPLASHFKLSSQQCPSTEIEKEEMKAVPYASAVGSLMYAMVCTRPDIAHAVGVVSRFI 360
            V  PL  H KLS +QCP  E EKEEM  VPY+SAVGSLMYAMVCTRPDIA+AVGVVSRF+
Sbjct: 1066 VHVPLPGHLKLSKKQCPVNE-EKEEMSKVPYSSAVGSLMYAMVCTRPDIAYAVGVVSRFL 1124

Query: 361  SNPGKEHWTAVKWIMRYLRGTTKANLCFGDRSHRLVCYSDADWAGDVDTRRSTSGYLVTF 540
            SNPGKEHW AVKWI+RYL+GT K+ LCFG+ +  L  YSDAD AGDVD+R+STSGYL+TF
Sbjct: 1125 SNPGKEHWNAVKWILRYLKGTAKSCLCFGNGNLMLTGYSDADMAGDVDSRKSTSGYLITF 1184

Query: 541  AGGAVSWQSKLQKCVALSTTEAEYIAVTEASKEM 642
            AGGA+SWQS+LQKC+ALSTTEAE+IA+TE  KE+
Sbjct: 1185 AGGAISWQSRLQKCIALSTTEAEFIAITEGCKEI 1218


>gb|KYP52741.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 468

 Score =  294 bits (753), Expect = 4e-95
 Identities = 140/212 (66%), Positives = 174/212 (82%)
 Frame = +1

Query: 1   KIEKLKKELSMSFEMKDLGSARQILGMSISRDRKTRRLWISQESYIEKVLERFSMQKAKP 180
           +I+KLKK+L  SF MKD+G A+QIL + I RDR+  + W+SQE YI++VL+RF M+ AK 
Sbjct: 254 RIDKLKKQLGESFVMKDMGVAKQILSIRIIRDREKGKFWLSQEQYIKRVLQRFQMENAKA 313

Query: 181 VSSPLASHFKLSSQQCPSTEIEKEEMKAVPYASAVGSLMYAMVCTRPDIAHAVGVVSRFI 360
           VS+PLA+HFKLS +Q P+ E EK +M+ VPYASAVGSLMYAMVCTRPDIAHAVG V+RF+
Sbjct: 314 VSTPLATHFKLSVKQSPTNEAEKLDMERVPYASAVGSLMYAMVCTRPDIAHAVGTVNRFL 373

Query: 361 SNPGKEHWTAVKWIMRYLRGTTKANLCFGDRSHRLVCYSDADWAGDVDTRRSTSGYLVTF 540
           SNPG++HW AVKWI+R+L GT    LCFG     LV YSD+D AGDVD+R+STSGYL+ F
Sbjct: 374 SNPGRKHWNAVKWILRFLHGTVDMKLCFGGDKPTLVGYSDSDMAGDVDSRKSTSGYLIKF 433

Query: 541 AGGAVSWQSKLQKCVALSTTEAEYIAVTEASK 636
           AGG V+WQS+LQ+CVALST EAE+IA+TEA K
Sbjct: 434 AGGVVAWQSRLQRCVALSTIEAEFIAITEACK 465


>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
          Length = 1556

 Score =  312 bits (800), Expect = 7e-95
 Identities = 146/213 (68%), Positives = 183/213 (85%)
 Frame = +1

Query: 4    IEKLKKELSMSFEMKDLGSARQILGMSISRDRKTRRLWISQESYIEKVLERFSMQKAKPV 183
            I +LKK+LS SF MKD+G+A+QILG+ I RDR+ ++LW+SQE+Y+++VL+RF M+ AK V
Sbjct: 966  INRLKKQLSESFAMKDMGAAKQILGIRIMRDRQEKKLWLSQENYVKRVLQRFQMENAKVV 1025

Query: 184  SSPLASHFKLSSQQCPSTEIEKEEMKAVPYASAVGSLMYAMVCTRPDIAHAVGVVSRFIS 363
            S+PLA+HFKLS++Q PS E EK +M+ +PYASAVGSLMYAMVCTRPDIAH VG VSRF+S
Sbjct: 1026 STPLATHFKLSTKQSPSYEYEKSDMQRIPYASAVGSLMYAMVCTRPDIAHVVGTVSRFMS 1085

Query: 364  NPGKEHWTAVKWIMRYLRGTTKANLCFGDRSHRLVCYSDADWAGDVDTRRSTSGYLVTFA 543
            NPG+EHW AVKWI+RYLRGTT   LCFG     LV Y+D+D  GD+D+RRSTSGY++ FA
Sbjct: 1086 NPGREHWNAVKWILRYLRGTTCLRLCFGGDKPTLVGYTDSDMGGDIDSRRSTSGYVIKFA 1145

Query: 544  GGAVSWQSKLQKCVALSTTEAEYIAVTEASKEM 642
            GGAV+WQS+LQKCVALSTTEAE+IA+TEA KE+
Sbjct: 1146 GGAVAWQSRLQKCVALSTTEAEFIAITEACKEL 1178


>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
          Length = 1207

 Score =  305 bits (782), Expect = 3e-93
 Identities = 151/214 (70%), Positives = 178/214 (83%)
 Frame = +1

Query: 1    KIEKLKKELSMSFEMKDLGSARQILGMSISRDRKTRRLWISQESYIEKVLERFSMQKAKP 180
            +I+ LKK+LS SF MKDLG  ++ILG+ I RDR +++L + QE YIE VL RF+M KAK 
Sbjct: 873  RIDNLKKQLSKSFAMKDLGPVKRILGIRIERDRASKKLCMLQEQYIENVLARFNMSKAKV 932

Query: 181  VSSPLASHFKLSSQQCPSTEIEKEEMKAVPYASAVGSLMYAMVCTRPDIAHAVGVVSRFI 360
            VSSPLASHFKLSS+  PST+ EKE+M+ VPYASAVGSLMYAMVCTRPDIA+A+GVVSRF+
Sbjct: 933  VSSPLASHFKLSSRHSPSTDKEKEDMRRVPYASAVGSLMYAMVCTRPDIAYAIGVVSRFL 992

Query: 361  SNPGKEHWTAVKWIMRYLRGTTKANLCFGDRSHRLVCYSDADWAGDVDTRRSTSGYLVTF 540
            SNPG+ HW AVKWIMRYLRGT+K  L FG     LV Y+D+D AGDVD RR TSGYL+TF
Sbjct: 993  SNPGRHHWEAVKWIMRYLRGTSKLKLTFGSGKPILVGYTDSDMAGDVDNRRXTSGYLMTF 1052

Query: 541  AGGAVSWQSKLQKCVALSTTEAEYIAVTEASKEM 642
            +GGAVSWQS+LQKCVALSTTEA+YIA  EA KE+
Sbjct: 1053 SGGAVSWQSRLQKCVALSTTEAKYIATAEACKEL 1086


>gb|PKI73919.1| hypothetical protein CRG98_005683 [Punica granatum]
          Length = 350

 Score =  285 bits (728), Expect = 7e-93
 Identities = 145/214 (67%), Positives = 170/214 (79%)
 Frame = +1

Query: 1   KIEKLKKELSMSFEMKDLGSARQILGMSISRDRKTRRLWISQESYIEKVLERFSMQKAKP 180
           KI  L KEL+ SF MKDLG A+QILGM ISRDR + +LW+SQ+ YIEK+L+ F+M  AKP
Sbjct: 101 KIAYLNKELNKSFAMKDLGPAKQILGMHISRDRSSGKLWLSQKKYIEKILDPFNMGNAKP 160

Query: 181 VSSPLASHFKLSSQQCPSTEIEKEEMKAVPYASAVGSLMYAMVCTRPDIAHAVGVVSRFI 360
           VSSPL SHFKLSS+Q P++E EKEEMK V Y+S VGSLMYAMVCTRP+IAH+VGV     
Sbjct: 161 VSSPLVSHFKLSSKQYPTSEKEKEEMKKVLYSSTVGSLMYAMVCTRPNIAHSVGV----- 215

Query: 361 SNPGKEHWTAVKWIMRYLRGTTKANLCFGDRSHRLVCYSDADWAGDVDTRRSTSGYLVTF 540
                 HW AVKWI+RYLRGT+K  L FG     LV Y++ D AGD+D+R+STSGYL+TF
Sbjct: 216 ------HWNAVKWILRYLRGTSKVCLHFGTDKPELVGYTNTDIAGDIDSRKSTSGYLMTF 269

Query: 541 AGGAVSWQSKLQKCVALSTTEAEYIAVTEASKEM 642
           AGGA+SWQSKLQKC+ALSTTEAEYIAVTE  KEM
Sbjct: 270 AGGAISWQSKLQKCIALSTTEAEYIAVTEGCKEM 303