BLASTX nr result

ID: Ophiopogon25_contig00011737 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00011737
         (449 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020261925.1| squamous cell carcinoma antigen recognized b...    57   2e-06
ref|XP_020261924.1| squamous cell carcinoma antigen recognized b...    57   2e-06

>ref|XP_020261925.1| squamous cell carcinoma antigen recognized by T-cells 3 isoform X2
           [Asparagus officinalis]
          Length = 832

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
 Frame = -2

Query: 388 P*MNDRSDTSKPKPVSKEKHDDGVKLVGRTAFL--PRAVIPLGRTNKEAKAADDSEQPKS 215
           P  N+   TS+   V   + +  VK +GR  F   PRAV  L  +NKE K AD+ E+PKS
Sbjct: 762 PFRNEHGGTSRTAKVVVTEGESEVKPIGRNTFFAAPRAVRSLAGSNKEPKGADNIEEPKS 821

Query: 214 NDEFRAM 194
           NDEFRAM
Sbjct: 822 NDEFRAM 828


>ref|XP_020261924.1| squamous cell carcinoma antigen recognized by T-cells 3 isoform X1
           [Asparagus officinalis]
 gb|ONK73079.1| uncharacterized protein A4U43_C04F26940 [Asparagus officinalis]
          Length = 848

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
 Frame = -2

Query: 388 P*MNDRSDTSKPKPVSKEKHDDGVKLVGRTAFL--PRAVIPLGRTNKEAKAADDSEQPKS 215
           P  N+   TS+   V   + +  VK +GR  F   PRAV  L  +NKE K AD+ E+PKS
Sbjct: 778 PFRNEHGGTSRTAKVVVTEGESEVKPIGRNTFFAAPRAVRSLAGSNKEPKGADNIEEPKS 837

Query: 214 NDEFRAM 194
           NDEFRAM
Sbjct: 838 NDEFRAM 844


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