BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00011526
         (617 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020274150.1| LOW QUALITY PROTEIN: RNA pseudouridine synth...   300   5e-98
ref|XP_017701148.1| PREDICTED: RNA pseudouridine synthase 2, chl...   287   1e-93
ref|XP_019709777.1| PREDICTED: RNA pseudouridine synthase 2, chl...   284   7e-93
ref|XP_008806144.1| PREDICTED: RNA pseudouridine synthase 2, chl...   287   9e-93
ref|XP_019709776.1| PREDICTED: RNA pseudouridine synthase 2, chl...   284   1e-92
ref|XP_018675717.1| PREDICTED: RNA pseudouridine synthase 2, chl...   283   1e-91
ref|XP_010935174.1| PREDICTED: RNA pseudouridine synthase 2, chl...   284   2e-91
ref|XP_009382727.1| PREDICTED: RNA pseudouridine synthase 2, chl...   283   3e-91
ref|XP_020113504.1| RNA pseudouridine synthase 2, chloroplastic ...   279   4e-91
ref|XP_020113503.1| RNA pseudouridine synthase 2, chloroplastic ...   279   7e-90
gb|PKU65753.1| RNA pseudouridine synthase 2, chloroplastic [Dend...   265   5e-86
ref|XP_020704972.1| RNA pseudouridine synthase 2, chloroplastic-...   265   9e-85
ref|XP_020704971.1| RNA pseudouridine synthase 2, chloroplastic-...   265   2e-84
gb|PKA60768.1| RNA pseudouridine synthase 2, chloroplastic [Apos...   259   1e-81
ref|XP_010241330.1| PREDICTED: RNA pseudouridine synthase 2, chl...   254   4e-80
ref|XP_010241329.1| PREDICTED: RNA pseudouridine synthase 2, chl...   254   6e-80
gb|OVA15944.1| RNA-binding S4 domain [Macleaya cordata]               254   7e-80
ref|XP_010241328.1| PREDICTED: RNA pseudouridine synthase 2, chl...   254   9e-80
ref|XP_020578124.1| RNA pseudouridine synthase 2, chloroplastic-...   248   5e-78
ref|XP_018808137.1| PREDICTED: RNA pseudouridine synthase 2, chl...   240   1e-76

>ref|XP_020274150.1| LOW QUALITY PROTEIN: RNA pseudouridine synthase 2, chloroplastic
           [Asparagus officinalis]
          Length = 434

 Score =  300 bits (768), Expect = 5e-98
 Identities = 156/205 (76%), Positives = 169/205 (82%)
 Frame = -3

Query: 615 NPDPDPNPQSVRVNYTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAV 436
           N  P+PNPQ VR N+ G+RFE  VD GSAKAR+DSWIAS                GLVAV
Sbjct: 40  NSGPNPNPQPVRANHAGVRFEGIVDVGSAKARIDSWIASXXXXXXXXAX------GLVAV 93

Query: 435 NGITVHKVSHRIKEGDKVSCVVSELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPA 256
           NG TV KVSHRIKEGDKVSC VSELQPLRAEPEDIPLDIV+EDAHVLVVNKPAHMVVHPA
Sbjct: 94  NGRTVQKVSHRIKEGDKVSCTVSELQPLRAEPEDIPLDIVFEDAHVLVVNKPAHMVVHPA 153

Query: 255 PGNANGTLVNAVLNHCKLPMVAHTNNKRSMETEEYIESSDSENEDFLIDQSSVEEFKSEN 76
           PGNANGTLVNAVLNHC+LP  A T+NKR +E+EE I+SSD+E EDF IDQ S+EEF S+N
Sbjct: 154 PGNANGTLVNAVLNHCRLPTAACTDNKRCIESEECIDSSDNEIEDFPIDQ-SIEEFSSDN 212

Query: 75  NDALVRPGIVHRLDKGTSGLLVIAK 1
           NDALVRPGIVHRLDKGTSGLLVIAK
Sbjct: 213 NDALVRPGIVHRLDKGTSGLLVIAK 237


>ref|XP_017701148.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X4
           [Phoenix dactylifera]
          Length = 367

 Score =  287 bits (734), Expect = 1e-93
 Identities = 147/207 (71%), Positives = 172/207 (83%), Gaps = 2/207 (0%)
 Frame = -3

Query: 615 NPDPDPN-PQSV-RVNYTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLV 442
           NP+P P  PQ V R N+ GLR E SV+ G+ K R+DSWI+SRIQGVSRARI+SSIRSG V
Sbjct: 47  NPEPSPQRPQRVLRGNHAGLRLEESVEIGAEKTRLDSWISSRIQGVSRARIQSSIRSGFV 106

Query: 441 AVNGITVHKVSHRIKEGDKVSCVVSELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVH 262
            VNG TV KVSH IK GD VSC VSELQPLRA+ EDIPLDIVYEDA+VLVVNKPAHMVVH
Sbjct: 107 VVNGRTVDKVSHIIKGGDMVSCTVSELQPLRAKAEDIPLDIVYEDAYVLVVNKPAHMVVH 166

Query: 261 PAPGNANGTLVNAVLNHCKLPMVAHTNNKRSMETEEYIESSDSENEDFLIDQSSVEEFKS 82
           PAPGN NGTLV+A+L+HC+LP +A  +N ++ E+EE  ESSD+E +++  DQSSVE   S
Sbjct: 167 PAPGNVNGTLVSAILHHCRLPTIACVSNSKNSESEECSESSDNEMDNYYFDQSSVEGVSS 226

Query: 81  ENNDALVRPGIVHRLDKGTSGLLVIAK 1
           EN++ALVRPGIVHRLDKGTSGLLV+AK
Sbjct: 227 ENSEALVRPGIVHRLDKGTSGLLVVAK 253


>ref|XP_019709777.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X3
           [Elaeis guineensis]
 ref|XP_019709778.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X3
           [Elaeis guineensis]
          Length = 343

 Score =  284 bits (726), Expect = 7e-93
 Identities = 146/206 (70%), Positives = 167/206 (81%), Gaps = 1/206 (0%)
 Frame = -3

Query: 615 NPDPDPNPQSVRV-NYTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVA 439
           NP+P    Q V   N+ GLR E  V+ G+ K R+DSWI+SRI+ VSRARI+SSIRSGLV 
Sbjct: 58  NPEPFQRQQRVITGNHAGLRLEERVEIGAEKTRLDSWISSRIETVSRARIQSSIRSGLVT 117

Query: 438 VNGITVHKVSHRIKEGDKVSCVVSELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHP 259
           VNG TV KVSH IK GD VSC VSELQPLRAE EDIPLDIVYEDAHVLVVNKPAHMVVHP
Sbjct: 118 VNGRTVDKVSHIIKGGDMVSCTVSELQPLRAEAEDIPLDIVYEDAHVLVVNKPAHMVVHP 177

Query: 258 APGNANGTLVNAVLNHCKLPMVAHTNNKRSMETEEYIESSDSENEDFLIDQSSVEEFKSE 79
           APGNANGTLVNA+L+HC+LP +A  N  +  E+E+  ESSDSE +++  DQSSVE   SE
Sbjct: 178 APGNANGTLVNAILHHCRLPTIACVNKSKISESEDCSESSDSEMDNYYFDQSSVEGISSE 237

Query: 78  NNDALVRPGIVHRLDKGTSGLLVIAK 1
           N++ALVRPGIVHRLDKGTSGLLV+AK
Sbjct: 238 NSEALVRPGIVHRLDKGTSGLLVVAK 263


>ref|XP_008806144.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
           [Phoenix dactylifera]
          Length = 439

 Score =  287 bits (734), Expect = 9e-93
 Identities = 147/207 (71%), Positives = 172/207 (83%), Gaps = 2/207 (0%)
 Frame = -3

Query: 615 NPDPDPN-PQSV-RVNYTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLV 442
           NP+P P  PQ V R N+ GLR E SV+ G+ K R+DSWI+SRIQGVSRARI+SSIRSG V
Sbjct: 47  NPEPSPQRPQRVLRGNHAGLRLEESVEIGAEKTRLDSWISSRIQGVSRARIQSSIRSGFV 106

Query: 441 AVNGITVHKVSHRIKEGDKVSCVVSELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVH 262
            VNG TV KVSH IK GD VSC VSELQPLRA+ EDIPLDIVYEDA+VLVVNKPAHMVVH
Sbjct: 107 VVNGRTVDKVSHIIKGGDMVSCTVSELQPLRAKAEDIPLDIVYEDAYVLVVNKPAHMVVH 166

Query: 261 PAPGNANGTLVNAVLNHCKLPMVAHTNNKRSMETEEYIESSDSENEDFLIDQSSVEEFKS 82
           PAPGN NGTLV+A+L+HC+LP +A  +N ++ E+EE  ESSD+E +++  DQSSVE   S
Sbjct: 167 PAPGNVNGTLVSAILHHCRLPTIACVSNSKNSESEECSESSDNEMDNYYFDQSSVEGVSS 226

Query: 81  ENNDALVRPGIVHRLDKGTSGLLVIAK 1
           EN++ALVRPGIVHRLDKGTSGLLV+AK
Sbjct: 227 ENSEALVRPGIVHRLDKGTSGLLVVAK 253


>ref|XP_019709776.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
           [Elaeis guineensis]
          Length = 357

 Score =  284 bits (726), Expect = 1e-92
 Identities = 146/206 (70%), Positives = 167/206 (81%), Gaps = 1/206 (0%)
 Frame = -3

Query: 615 NPDPDPNPQSVRV-NYTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVA 439
           NP+P    Q V   N+ GLR E  V+ G+ K R+DSWI+SRI+ VSRARI+SSIRSGLV 
Sbjct: 58  NPEPFQRQQRVITGNHAGLRLEERVEIGAEKTRLDSWISSRIETVSRARIQSSIRSGLVT 117

Query: 438 VNGITVHKVSHRIKEGDKVSCVVSELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHP 259
           VNG TV KVSH IK GD VSC VSELQPLRAE EDIPLDIVYEDAHVLVVNKPAHMVVHP
Sbjct: 118 VNGRTVDKVSHIIKGGDMVSCTVSELQPLRAEAEDIPLDIVYEDAHVLVVNKPAHMVVHP 177

Query: 258 APGNANGTLVNAVLNHCKLPMVAHTNNKRSMETEEYIESSDSENEDFLIDQSSVEEFKSE 79
           APGNANGTLVNA+L+HC+LP +A  N  +  E+E+  ESSDSE +++  DQSSVE   SE
Sbjct: 178 APGNANGTLVNAILHHCRLPTIACVNKSKISESEDCSESSDSEMDNYYFDQSSVEGISSE 237

Query: 78  NNDALVRPGIVHRLDKGTSGLLVIAK 1
           N++ALVRPGIVHRLDKGTSGLLV+AK
Sbjct: 238 NSEALVRPGIVHRLDKGTSGLLVVAK 263


>ref|XP_018675717.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
           [Musa acuminata subsp. malaccensis]
          Length = 403

 Score =  283 bits (724), Expect = 1e-91
 Identities = 141/205 (68%), Positives = 170/205 (82%)
 Frame = -3

Query: 615 NPDPDPNPQSVRVNYTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAV 436
           +P+  P    +RVN+ G+R E  V+ G+ K R+DSWI+SRI+GVSRARI+SSIRSGLVAV
Sbjct: 46  DPESPPPRGEIRVNHAGVRLEERVEVGAEKTRIDSWISSRIRGVSRARIQSSIRSGLVAV 105

Query: 435 NGITVHKVSHRIKEGDKVSCVVSELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPA 256
           NG TV+KVSH IK GD VSC++S+L PL+AEPED+PLDIVYED HV+VVNKPAHMVVHPA
Sbjct: 106 NGRTVNKVSHIIKGGDMVSCMISKLLPLKAEPEDMPLDIVYEDEHVIVVNKPAHMVVHPA 165

Query: 255 PGNANGTLVNAVLNHCKLPMVAHTNNKRSMETEEYIESSDSENEDFLIDQSSVEEFKSEN 76
           PGNANGTLVNA+L+HC+LP+ A  NN +  +TEE  ESSDS+ E+   DQSS+EE   EN
Sbjct: 166 PGNANGTLVNAILHHCRLPIRAFANNIQISDTEECSESSDSDIEEVCADQSSMEEVGIEN 225

Query: 75  NDALVRPGIVHRLDKGTSGLLVIAK 1
            +ALVRPGIVHRLDKGTSGLLV+AK
Sbjct: 226 YEALVRPGIVHRLDKGTSGLLVVAK 250


>ref|XP_010935174.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
           [Elaeis guineensis]
          Length = 449

 Score =  284 bits (726), Expect = 2e-91
 Identities = 146/206 (70%), Positives = 167/206 (81%), Gaps = 1/206 (0%)
 Frame = -3

Query: 615 NPDPDPNPQSVRV-NYTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVA 439
           NP+P    Q V   N+ GLR E  V+ G+ K R+DSWI+SRI+ VSRARI+SSIRSGLV 
Sbjct: 58  NPEPFQRQQRVITGNHAGLRLEERVEIGAEKTRLDSWISSRIETVSRARIQSSIRSGLVT 117

Query: 438 VNGITVHKVSHRIKEGDKVSCVVSELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHP 259
           VNG TV KVSH IK GD VSC VSELQPLRAE EDIPLDIVYEDAHVLVVNKPAHMVVHP
Sbjct: 118 VNGRTVDKVSHIIKGGDMVSCTVSELQPLRAEAEDIPLDIVYEDAHVLVVNKPAHMVVHP 177

Query: 258 APGNANGTLVNAVLNHCKLPMVAHTNNKRSMETEEYIESSDSENEDFLIDQSSVEEFKSE 79
           APGNANGTLVNA+L+HC+LP +A  N  +  E+E+  ESSDSE +++  DQSSVE   SE
Sbjct: 178 APGNANGTLVNAILHHCRLPTIACVNKSKISESEDCSESSDSEMDNYYFDQSSVEGISSE 237

Query: 78  NNDALVRPGIVHRLDKGTSGLLVIAK 1
           N++ALVRPGIVHRLDKGTSGLLV+AK
Sbjct: 238 NSEALVRPGIVHRLDKGTSGLLVVAK 263


>ref|XP_009382727.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
           [Musa acuminata subsp. malaccensis]
 ref|XP_009382728.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
           [Musa acuminata subsp. malaccensis]
          Length = 440

 Score =  283 bits (724), Expect = 3e-91
 Identities = 141/205 (68%), Positives = 170/205 (82%)
 Frame = -3

Query: 615 NPDPDPNPQSVRVNYTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAV 436
           +P+  P    +RVN+ G+R E  V+ G+ K R+DSWI+SRI+GVSRARI+SSIRSGLVAV
Sbjct: 46  DPESPPPRGEIRVNHAGVRLEERVEVGAEKTRIDSWISSRIRGVSRARIQSSIRSGLVAV 105

Query: 435 NGITVHKVSHRIKEGDKVSCVVSELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPA 256
           NG TV+KVSH IK GD VSC++S+L PL+AEPED+PLDIVYED HV+VVNKPAHMVVHPA
Sbjct: 106 NGRTVNKVSHIIKGGDMVSCMISKLLPLKAEPEDMPLDIVYEDEHVIVVNKPAHMVVHPA 165

Query: 255 PGNANGTLVNAVLNHCKLPMVAHTNNKRSMETEEYIESSDSENEDFLIDQSSVEEFKSEN 76
           PGNANGTLVNA+L+HC+LP+ A  NN +  +TEE  ESSDS+ E+   DQSS+EE   EN
Sbjct: 166 PGNANGTLVNAILHHCRLPIRAFANNIQISDTEECSESSDSDIEEVCADQSSMEEVGIEN 225

Query: 75  NDALVRPGIVHRLDKGTSGLLVIAK 1
            +ALVRPGIVHRLDKGTSGLLV+AK
Sbjct: 226 YEALVRPGIVHRLDKGTSGLLVVAK 250


>ref|XP_020113504.1| RNA pseudouridine synthase 2, chloroplastic isoform X2 [Ananas
           comosus]
          Length = 333

 Score =  279 bits (714), Expect = 4e-91
 Identities = 140/204 (68%), Positives = 166/204 (81%), Gaps = 1/204 (0%)
 Frame = -3

Query: 609 DPDPNPQS-VRVNYTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAVN 433
           DPDPNP   +R ++ G R E +V+ GS ++R+D+W+ASRI+GVSRARI+SSIRSGLVAVN
Sbjct: 37  DPDPNPSPRLRSSHAGARLEEAVEVGSGRSRLDAWLASRIRGVSRARIQSSIRSGLVAVN 96

Query: 432 GITVHKVSHRIKEGDKVSCVVSELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPAP 253
           G TV KVSH +K GD +SC VSELQPLRAE EDIPLDIVYED HVLVVNKPAHMVVHPAP
Sbjct: 97  GRTVDKVSHMVKGGDMISCTVSELQPLRAEAEDIPLDIVYEDEHVLVVNKPAHMVVHPAP 156

Query: 252 GNANGTLVNAVLNHCKLPMVAHTNNKRSMETEEYIESSDSENEDFLIDQSSVEEFKSENN 73
           GNANGTLVNA+L+HC+LPMV   N+    E++E ++SSD E + +  DQ S EE   E  
Sbjct: 157 GNANGTLVNAILHHCRLPMVTCVNDSTMSESDESLDSSDEEIDVYHADQFSTEELSLEVP 216

Query: 72  DALVRPGIVHRLDKGTSGLLVIAK 1
           +ALVRPGIVHRLDKGTSGLLV+AK
Sbjct: 217 EALVRPGIVHRLDKGTSGLLVVAK 240


>ref|XP_020113503.1| RNA pseudouridine synthase 2, chloroplastic isoform X1 [Ananas
           comosus]
 gb|OAY68405.1| RNA pseudouridine synthase 2, chloroplastic [Ananas comosus]
          Length = 430

 Score =  279 bits (714), Expect = 7e-90
 Identities = 140/204 (68%), Positives = 166/204 (81%), Gaps = 1/204 (0%)
 Frame = -3

Query: 609 DPDPNPQS-VRVNYTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAVN 433
           DPDPNP   +R ++ G R E +V+ GS ++R+D+W+ASRI+GVSRARI+SSIRSGLVAVN
Sbjct: 37  DPDPNPSPRLRSSHAGARLEEAVEVGSGRSRLDAWLASRIRGVSRARIQSSIRSGLVAVN 96

Query: 432 GITVHKVSHRIKEGDKVSCVVSELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPAP 253
           G TV KVSH +K GD +SC VSELQPLRAE EDIPLDIVYED HVLVVNKPAHMVVHPAP
Sbjct: 97  GRTVDKVSHMVKGGDMISCTVSELQPLRAEAEDIPLDIVYEDEHVLVVNKPAHMVVHPAP 156

Query: 252 GNANGTLVNAVLNHCKLPMVAHTNNKRSMETEEYIESSDSENEDFLIDQSSVEEFKSENN 73
           GNANGTLVNA+L+HC+LPMV   N+    E++E ++SSD E + +  DQ S EE   E  
Sbjct: 157 GNANGTLVNAILHHCRLPMVTCVNDSTMSESDESLDSSDEEIDVYHADQFSTEELSLEVP 216

Query: 72  DALVRPGIVHRLDKGTSGLLVIAK 1
           +ALVRPGIVHRLDKGTSGLLV+AK
Sbjct: 217 EALVRPGIVHRLDKGTSGLLVVAK 240


>gb|PKU65753.1| RNA pseudouridine synthase 2, chloroplastic [Dendrobium catenatum]
          Length = 310

 Score =  265 bits (678), Expect = 5e-86
 Identities = 134/202 (66%), Positives = 163/202 (80%)
 Frame = -3

Query: 606 PDPNPQSVRVNYTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAVNGI 427
           P+  P++VR NYTG+R   +V+ G  + RVDSWI+SRI G+SRAR++SSIR+GLV VNG 
Sbjct: 42  PERPPEAVRSNYTGIRLAETVELGFERTRVDSWISSRIPGISRARVQSSIRTGLVTVNGR 101

Query: 426 TVHKVSHRIKEGDKVSCVVSELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPAPGN 247
            + KVSH +K GDKVSCVV EL+PL+AEPE+IPL+IVYED HVLVVNKPAHMVVHPAPGN
Sbjct: 102 IIDKVSHILKGGDKVSCVVCELEPLKAEPEEIPLNIVYEDEHVLVVNKPAHMVVHPAPGN 161

Query: 246 ANGTLVNAVLNHCKLPMVAHTNNKRSMETEEYIESSDSENEDFLIDQSSVEEFKSENNDA 67
           ANGTLVNA+LNHC+LP  A  N K S ET+   +SS++E  DF +   S EE K+ ++D 
Sbjct: 162 ANGTLVNAILNHCQLPAGACINRKGSSETDN-TDSSENEVGDFYVGH-SYEELKTSSSDE 219

Query: 66  LVRPGIVHRLDKGTSGLLVIAK 1
           LVRPGIVHRLDKGTSGLLV+AK
Sbjct: 220 LVRPGIVHRLDKGTSGLLVVAK 241


>ref|XP_020704972.1| RNA pseudouridine synthase 2, chloroplastic-like isoform X2
           [Dendrobium catenatum]
          Length = 404

 Score =  265 bits (678), Expect = 9e-85
 Identities = 134/202 (66%), Positives = 163/202 (80%)
 Frame = -3

Query: 606 PDPNPQSVRVNYTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAVNGI 427
           P+  P++VR NYTG+R   +V+ G  + RVDSWI+SRI G+SRAR++SSIR+GLV VNG 
Sbjct: 42  PERPPEAVRSNYTGIRLAETVELGFERTRVDSWISSRIPGISRARVQSSIRTGLVTVNGR 101

Query: 426 TVHKVSHRIKEGDKVSCVVSELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPAPGN 247
            + KVSH +K GDKVSCVV EL+PL+AEPE+IPL+IVYED HVLVVNKPAHMVVHPAPGN
Sbjct: 102 IIDKVSHILKGGDKVSCVVCELEPLKAEPEEIPLNIVYEDEHVLVVNKPAHMVVHPAPGN 161

Query: 246 ANGTLVNAVLNHCKLPMVAHTNNKRSMETEEYIESSDSENEDFLIDQSSVEEFKSENNDA 67
           ANGTLVNA+LNHC+LP  A  N K S ET+   +SS++E  DF +   S EE K+ ++D 
Sbjct: 162 ANGTLVNAILNHCQLPAGACINRKGSSETDN-TDSSENEVGDFYVGH-SYEELKTSSSDE 219

Query: 66  LVRPGIVHRLDKGTSGLLVIAK 1
           LVRPGIVHRLDKGTSGLLV+AK
Sbjct: 220 LVRPGIVHRLDKGTSGLLVVAK 241


>ref|XP_020704971.1| RNA pseudouridine synthase 2, chloroplastic-like isoform X1
           [Dendrobium catenatum]
          Length = 437

 Score =  265 bits (678), Expect = 2e-84
 Identities = 134/202 (66%), Positives = 163/202 (80%)
 Frame = -3

Query: 606 PDPNPQSVRVNYTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAVNGI 427
           P+  P++VR NYTG+R   +V+ G  + RVDSWI+SRI G+SRAR++SSIR+GLV VNG 
Sbjct: 42  PERPPEAVRSNYTGIRLAETVELGFERTRVDSWISSRIPGISRARVQSSIRTGLVTVNGR 101

Query: 426 TVHKVSHRIKEGDKVSCVVSELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPAPGN 247
            + KVSH +K GDKVSCVV EL+PL+AEPE+IPL+IVYED HVLVVNKPAHMVVHPAPGN
Sbjct: 102 IIDKVSHILKGGDKVSCVVCELEPLKAEPEEIPLNIVYEDEHVLVVNKPAHMVVHPAPGN 161

Query: 246 ANGTLVNAVLNHCKLPMVAHTNNKRSMETEEYIESSDSENEDFLIDQSSVEEFKSENNDA 67
           ANGTLVNA+LNHC+LP  A  N K S ET+   +SS++E  DF +   S EE K+ ++D 
Sbjct: 162 ANGTLVNAILNHCQLPAGACINRKGSSETDN-TDSSENEVGDFYVGH-SYEELKTSSSDE 219

Query: 66  LVRPGIVHRLDKGTSGLLVIAK 1
           LVRPGIVHRLDKGTSGLLV+AK
Sbjct: 220 LVRPGIVHRLDKGTSGLLVVAK 241


>gb|PKA60768.1| RNA pseudouridine synthase 2, chloroplastic [Apostasia shenzhenica]
          Length = 470

 Score =  259 bits (662), Expect = 1e-81
 Identities = 131/202 (64%), Positives = 154/202 (76%), Gaps = 10/202 (4%)
 Frame = -3

Query: 576 NYTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAVNGITVHK------ 415
           N++G+R E  V+ GS K R+DSWI++RI GVSRAR++SSIRSGLV VNG  +HK      
Sbjct: 76  NFSGIRLEEMVEIGSEKVRIDSWISTRISGVSRARVQSSIRSGLVTVNGRVIHKSKLPPN 135

Query: 414 ----VSHRIKEGDKVSCVVSELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPAPGN 247
                S  IK GDK+ C++SELQPLRAEPEDIPL+IVYEDAH+LVVNKPAHMVVHPAPGN
Sbjct: 136 SVLQASLIIKGGDKICCLISELQPLRAEPEDIPLNIVYEDAHLLVVNKPAHMVVHPAPGN 195

Query: 246 ANGTLVNAVLNHCKLPMVAHTNNKRSMETEEYIESSDSENEDFLIDQSSVEEFKSENNDA 67
            NGTLVNA+LNHC+LP+      K   ETE   +SSDSE +DF +D   VEE  S   +A
Sbjct: 196 VNGTLVNAILNHCQLPITTCMKRKSFSETEGATDSSDSEIDDFSLDYPLVEESNSSQKEA 255

Query: 66  LVRPGIVHRLDKGTSGLLVIAK 1
           LVRPGIVHRLDKGTSGLLV+AK
Sbjct: 256 LVRPGIVHRLDKGTSGLLVVAK 277


>ref|XP_010241330.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X3
           [Nelumbo nucifera]
          Length = 443

 Score =  254 bits (650), Expect = 4e-80
 Identities = 129/198 (65%), Positives = 156/198 (78%)
 Frame = -3

Query: 594 PQSVRVNYTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAVNGITVHK 415
           PQ+ R N+ G+  E +V+  S K+R+DSWI+SRI G+SRAR++SSI+SGLV+VNG  + K
Sbjct: 58  PQNRRGNFAGVCLEDTVEISSVKSRIDSWISSRIPGISRARVQSSIKSGLVSVNGRIIDK 117

Query: 414 VSHRIKEGDKVSCVVSELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPAPGNANGT 235
           VSH I+ GDKV+C + ELQPLRAEPEDIPLDIVYED  VLVVNKPAHMVVHPAPGNANGT
Sbjct: 118 VSHVIRAGDKVNCTIKELQPLRAEPEDIPLDIVYEDESVLVVNKPAHMVVHPAPGNANGT 177

Query: 234 LVNAVLNHCKLPMVAHTNNKRSMETEEYIESSDSENEDFLIDQSSVEEFKSENNDALVRP 55
           LVN +L+HC LPMVA TN+K   ET++    SD E++ F   Q S+EE  S   +  VRP
Sbjct: 178 LVNGILHHCSLPMVALTNSKVLSETDDI---SDDESDIFSSTQGSMEEVTSNICEVSVRP 234

Query: 54  GIVHRLDKGTSGLLVIAK 1
           GIVHRLDKGTSGLLV+AK
Sbjct: 235 GIVHRLDKGTSGLLVVAK 252


>ref|XP_010241329.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
           [Nelumbo nucifera]
          Length = 453

 Score =  254 bits (650), Expect = 6e-80
 Identities = 129/198 (65%), Positives = 156/198 (78%)
 Frame = -3

Query: 594 PQSVRVNYTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAVNGITVHK 415
           PQ+ R N+ G+  E +V+  S K+R+DSWI+SRI G+SRAR++SSI+SGLV+VNG  + K
Sbjct: 58  PQNRRGNFAGVCLEDTVEISSVKSRIDSWISSRIPGISRARVQSSIKSGLVSVNGRIIDK 117

Query: 414 VSHRIKEGDKVSCVVSELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPAPGNANGT 235
           VSH I+ GDKV+C + ELQPLRAEPEDIPLDIVYED  VLVVNKPAHMVVHPAPGNANGT
Sbjct: 118 VSHVIRAGDKVNCTIKELQPLRAEPEDIPLDIVYEDESVLVVNKPAHMVVHPAPGNANGT 177

Query: 234 LVNAVLNHCKLPMVAHTNNKRSMETEEYIESSDSENEDFLIDQSSVEEFKSENNDALVRP 55
           LVN +L+HC LPMVA TN+K   ET++    SD E++ F   Q S+EE  S   +  VRP
Sbjct: 178 LVNGILHHCSLPMVALTNSKVLSETDDI---SDDESDIFSSTQGSMEEVTSNICEVSVRP 234

Query: 54  GIVHRLDKGTSGLLVIAK 1
           GIVHRLDKGTSGLLV+AK
Sbjct: 235 GIVHRLDKGTSGLLVVAK 252


>gb|OVA15944.1| RNA-binding S4 domain [Macleaya cordata]
          Length = 458

 Score =  254 bits (650), Expect = 7e-80
 Identities = 127/194 (65%), Positives = 156/194 (80%)
 Frame = -3

Query: 582 RVNYTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAVNGITVHKVSHR 403
           R NY G+  E +V +G+ K+R+DSW++ RI G+SRAR++SSI+SGLV+VNG  ++KVSH 
Sbjct: 66  RSNYAGVTLEETVTNGTEKSRLDSWVSIRISGISRARVQSSIKSGLVSVNGRIINKVSHV 125

Query: 402 IKEGDKVSCVVSELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPAPGNANGTLVNA 223
           I+ GDKV+C +SELQPLRAEPEDIPLDIVYEDAHVLVVNKPA+MVVHPAPGN NGTLVN 
Sbjct: 126 IRAGDKVNCTISELQPLRAEPEDIPLDIVYEDAHVLVVNKPANMVVHPAPGNPNGTLVNG 185

Query: 222 VLNHCKLPMVAHTNNKRSMETEEYIESSDSENEDFLIDQSSVEEFKSENNDALVRPGIVH 43
           +L+HC+LP+V+  N++   ET +    SD E E F  DQS  EE  S +  ALVRPGIVH
Sbjct: 186 ILHHCRLPIVSSPNSEMLSETGDI---SDEEFESFSSDQSYSEEVSSSSCAALVRPGIVH 242

Query: 42  RLDKGTSGLLVIAK 1
           RLDKGTSGLLV+AK
Sbjct: 243 RLDKGTSGLLVVAK 256


>ref|XP_010241328.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
           [Nelumbo nucifera]
          Length = 471

 Score =  254 bits (650), Expect = 9e-80
 Identities = 129/198 (65%), Positives = 156/198 (78%)
 Frame = -3

Query: 594 PQSVRVNYTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAVNGITVHK 415
           PQ+ R N+ G+  E +V+  S K+R+DSWI+SRI G+SRAR++SSI+SGLV+VNG  + K
Sbjct: 58  PQNRRGNFAGVCLEDTVEISSVKSRIDSWISSRIPGISRARVQSSIKSGLVSVNGRIIDK 117

Query: 414 VSHRIKEGDKVSCVVSELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPAPGNANGT 235
           VSH I+ GDKV+C + ELQPLRAEPEDIPLDIVYED  VLVVNKPAHMVVHPAPGNANGT
Sbjct: 118 VSHVIRAGDKVNCTIKELQPLRAEPEDIPLDIVYEDESVLVVNKPAHMVVHPAPGNANGT 177

Query: 234 LVNAVLNHCKLPMVAHTNNKRSMETEEYIESSDSENEDFLIDQSSVEEFKSENNDALVRP 55
           LVN +L+HC LPMVA TN+K   ET++    SD E++ F   Q S+EE  S   +  VRP
Sbjct: 178 LVNGILHHCSLPMVALTNSKVLSETDDI---SDDESDIFSSTQGSMEEVTSNICEVSVRP 234

Query: 54  GIVHRLDKGTSGLLVIAK 1
           GIVHRLDKGTSGLLV+AK
Sbjct: 235 GIVHRLDKGTSGLLVVAK 252


>ref|XP_020578124.1| RNA pseudouridine synthase 2, chloroplastic-like isoform X2
           [Phalaenopsis equestris]
          Length = 390

 Score =  248 bits (632), Expect = 5e-78
 Identities = 129/202 (63%), Positives = 157/202 (77%)
 Frame = -3

Query: 606 PDPNPQSVRVNYTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAVNGI 427
           P+  P  V  NY+G+R   +V+ G  K RVDSWI+SRI G+SRAR++ SIRSGLV VNG 
Sbjct: 39  PERPPPQVGGNYSGIRLSETVELGFEKTRVDSWISSRIPGISRARVQHSIRSGLVTVNGR 98

Query: 426 TVHKVSHRIKEGDKVSCVVSELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPAPGN 247
            + KVSH IK GDKVSC V +L+PL+AEPE+IPL+IV+ED HVLVVNKPAHMVVHPAPG+
Sbjct: 99  IIEKVSHIIKGGDKVSCTVCQLEPLKAEPEEIPLNIVFEDEHVLVVNKPAHMVVHPAPGS 158

Query: 246 ANGTLVNAVLNHCKLPMVAHTNNKRSMETEEYIESSDSENEDFLIDQSSVEEFKSENNDA 67
           ANGTLVNA+LNHC+L  VA  N + S ETE+  +  D+E  DF     S E FK ++++A
Sbjct: 159 ANGTLVNALLNHCQLSAVACVNRQSSFETEDN-DLFDNEVNDFYFGH-SCEAFK-QSSEA 215

Query: 66  LVRPGIVHRLDKGTSGLLVIAK 1
           LVRPGIVHRLDKGTSGLLV+AK
Sbjct: 216 LVRPGIVHRLDKGTSGLLVVAK 237


>ref|XP_018808137.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X5
           [Juglans regia]
          Length = 267

 Score =  240 bits (612), Expect = 1e-76
 Identities = 122/194 (62%), Positives = 146/194 (75%)
 Frame = -3

Query: 582 RVNYTGLRFEASVDSGSAKARVDSWIASRIQGVSRARIESSIRSGLVAVNGITVHKVSHR 403
           R N+ G++ E +V   S K R+DSWI+SRI G+SRAR++SSIRSGLVAVNG  V KVSH 
Sbjct: 64  RANFGGVQLEDTVSLNSGKLRLDSWISSRIGGISRARVQSSIRSGLVAVNGRVVDKVSHN 123

Query: 402 IKEGDKVSCVVSELQPLRAEPEDIPLDIVYEDAHVLVVNKPAHMVVHPAPGNANGTLVNA 223
           +K GDKV+C +SELQPLRA PEDIPLDIV+ED HVLVVNKPAHMVVHPAPGNA GTLVN 
Sbjct: 124 VKTGDKVNCTISELQPLRAVPEDIPLDIVFEDEHVLVVNKPAHMVVHPAPGNATGTLVNG 183

Query: 222 VLNHCKLPMVAHTNNKRSMETEEYIESSDSENEDFLIDQSSVEEFKSENNDALVRPGIVH 43
           VL+HC  P+VA +N +   + E+    SD E   F   Q+  +   S  + A +RPGIVH
Sbjct: 184 VLHHCSPPVVAFSNEEVLSDAEDI---SDDELSSFSAGQNPNDGLYSRRSGASIRPGIVH 240

Query: 42  RLDKGTSGLLVIAK 1
           RLDKGTSGLLV+AK
Sbjct: 241 RLDKGTSGLLVVAK 254