BLASTX nr result
ID: Ophiopogon25_contig00011235
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00011235
(436 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020261492.1| COP9 signalosome complex subunit 3 [Asparagu... 69 6e-11
ref|XP_008812340.1| PREDICTED: COP9 signalosome complex subunit ... 66 1e-09
ref|XP_010943897.1| PREDICTED: COP9 signalosome complex subunit ... 65 1e-09
ref|XP_002263731.1| PREDICTED: COP9 signalosome complex subunit ... 59 2e-07
ref|XP_020578950.1| COP9 signalosome complex subunit 3 [Phalaeno... 56 2e-06
ref|XP_024031338.1| COP9 signalosome complex subunit 3 [Morus no... 56 2e-06
gb|EXC31360.1| COP9 signalosome complex subunit 3 [Morus notabilis] 56 2e-06
ref|XP_020678908.1| COP9 signalosome complex subunit 3-like isof... 56 3e-06
ref|XP_020678907.1| COP9 signalosome complex subunit 3-like isof... 56 3e-06
>ref|XP_020261492.1| COP9 signalosome complex subunit 3 [Asparagus officinalis]
Length = 422
Score = 69.3 bits (168), Expect = 6e-11
Identities = 37/51 (72%), Positives = 43/51 (84%), Gaps = 2/51 (3%)
Frame = -3
Query: 155 MDSIEAVVTYIQALSSKPQEI--LHALL*QSDNSLHSQSSRLAPFFERLDP 9
MDSIEA+V +IQALSS PQ+I LH LL QSD+SL SQ+ RLAPFF+RLDP
Sbjct: 1 MDSIEALVVHIQALSSNPQDISHLHPLLKQSDDSLKSQAPRLAPFFDRLDP 51
>ref|XP_008812340.1| PREDICTED: COP9 signalosome complex subunit 3 [Phoenix dactylifera]
Length = 424
Score = 65.9 bits (159), Expect = 1e-09
Identities = 32/53 (60%), Positives = 44/53 (83%), Gaps = 2/53 (3%)
Frame = -3
Query: 155 MDSIEAVVTYIQALSSKPQEI--LHALL*QSDNSLHSQSSRLAPFFERLDPAK 3
MDS+EA+V ++QALS P+E+ LH+LL QS++SL SQ+SRL PF E+LDP+K
Sbjct: 1 MDSVEALVAHVQALSGNPEEVSHLHSLLKQSEDSLRSQASRLLPFLEQLDPSK 53
>ref|XP_010943897.1| PREDICTED: COP9 signalosome complex subunit 3 [Elaeis guineensis]
ref|XP_010943898.1| PREDICTED: COP9 signalosome complex subunit 3 [Elaeis guineensis]
Length = 424
Score = 65.5 bits (158), Expect = 1e-09
Identities = 32/53 (60%), Positives = 44/53 (83%), Gaps = 2/53 (3%)
Frame = -3
Query: 155 MDSIEAVVTYIQALSSKPQEI--LHALL*QSDNSLHSQSSRLAPFFERLDPAK 3
MDS+EA+V ++QALS P+E+ LH+LL QS++SL SQ+SRL PF E+LDP+K
Sbjct: 1 MDSVEALVAHVQALSGNPEEVSHLHSLLKQSEDSLRSQASRLFPFLEQLDPSK 53
>ref|XP_002263731.1| PREDICTED: COP9 signalosome complex subunit 3 [Vitis vinifera]
emb|CBI40066.3| unnamed protein product, partial [Vitis vinifera]
Length = 424
Score = 59.3 bits (142), Expect = 2e-07
Identities = 31/52 (59%), Positives = 41/52 (78%), Gaps = 2/52 (3%)
Frame = -3
Query: 155 MDSIEAVVTYIQALSSKPQEI--LHALL*QSDNSLHSQSSRLAPFFERLDPA 6
MDS+EAVVT IQ LS +I LH+LL Q+D+ LH++S+RLAPF E+LDP+
Sbjct: 1 MDSVEAVVTQIQGLSGGSGDISLLHSLLKQADDLLHNESTRLAPFLEQLDPS 52
>ref|XP_020578950.1| COP9 signalosome complex subunit 3 [Phalaenopsis equestris]
Length = 422
Score = 56.2 bits (134), Expect = 2e-06
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 2/52 (3%)
Frame = -3
Query: 155 MDSIEAVVTYIQALSSKPQEI--LHALL*QSDNSLHSQSSRLAPFFERLDPA 6
M S+EA+V +IQ LS+ P EI LHA+L QS+ +L Q+SRL PF E+LDP+
Sbjct: 1 MGSVEALVAHIQGLSANPGEIAHLHAILKQSEETLRVQASRLVPFIEQLDPS 52
>ref|XP_024031338.1| COP9 signalosome complex subunit 3 [Morus notabilis]
Length = 424
Score = 56.2 bits (134), Expect = 2e-06
Identities = 29/53 (54%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Frame = -3
Query: 155 MDSIEAVVTYIQALSSKPQEI--LHALL*QSDNSLHSQSSRLAPFFERLDPAK 3
MDS+EA+VT IQ LSS ++ LH +L QSD+SLH +S+RL P ++LDP+K
Sbjct: 1 MDSVEALVTQIQGLSSTAGDVSRLHIILKQSDDSLHPESTRLFPALDQLDPSK 53
>gb|EXC31360.1| COP9 signalosome complex subunit 3 [Morus notabilis]
Length = 443
Score = 56.2 bits (134), Expect = 2e-06
Identities = 29/53 (54%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Frame = -3
Query: 155 MDSIEAVVTYIQALSSKPQEI--LHALL*QSDNSLHSQSSRLAPFFERLDPAK 3
MDS+EA+VT IQ LSS ++ LH +L QSD+SLH +S+RL P ++LDP+K
Sbjct: 1 MDSVEALVTQIQGLSSTAGDVSRLHIILKQSDDSLHPESTRLFPALDQLDPSK 53
>ref|XP_020678908.1| COP9 signalosome complex subunit 3-like isoform X2 [Dendrobium
catenatum]
Length = 401
Score = 55.8 bits (133), Expect = 3e-06
Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 2/52 (3%)
Frame = -3
Query: 155 MDSIEAVVTYIQALSSKPQEI--LHALL*QSDNSLHSQSSRLAPFFERLDPA 6
MDS+E +V +IQ LS P E+ LHA+L QS+++L Q+SRL PF E+LDP+
Sbjct: 1 MDSVEVLVAHIQDLSGNPVELAHLHAILKQSEDTLRVQASRLVPFIEQLDPS 52
>ref|XP_020678907.1| COP9 signalosome complex subunit 3-like isoform X1 [Dendrobium
catenatum]
gb|PKU75684.1| COP9 signalosome complex subunit 3 [Dendrobium catenatum]
Length = 422
Score = 55.8 bits (133), Expect = 3e-06
Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 2/52 (3%)
Frame = -3
Query: 155 MDSIEAVVTYIQALSSKPQEI--LHALL*QSDNSLHSQSSRLAPFFERLDPA 6
MDS+E +V +IQ LS P E+ LHA+L QS+++L Q+SRL PF E+LDP+
Sbjct: 1 MDSVEVLVAHIQDLSGNPVELAHLHAILKQSEDTLRVQASRLVPFIEQLDPS 52