BLASTX nr result
ID: Ophiopogon25_contig00010439
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00010439
(470 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AMO44331.1| RNA polymerase beta largest subunit, partial (chl... 308 e-106
gb|ANQ46316.1| rpoC1 (chloroplast) [Pogostemon cablin] 308 e-106
gb|AON75821.1| RNA polymerase beta' subunit (chloroplast) [Popul... 307 e-106
gb|AII18578.1| RNA polymerase beta subunit (chloroplast) [Viburn... 307 e-105
gb|AII18577.1| RNA polymerase beta subunit (chloroplast) [Viburn... 306 e-105
ref|YP_009049675.1| hypothetical protein (mitochondrion) [Capsic... 306 e-105
dbj|BAC77550.1| RNA polymerase beta' subunit, partial (chloropla... 305 e-105
gb|AON75811.1| RNA polymerase beta' subunit (chloroplast) [Popul... 305 e-105
gb|AJO25103.1| RNA polymerase beta (chloroplast) [Solanum lycope... 305 e-105
ref|WP_082924808.1| hypothetical protein [Paenarthrobacter nicot... 305 e-104
gb|AQM54407.1| RNA polymerase beta' subunit, partial (chloroplas... 303 e-104
ref|YP_009336368.1| RNA polymerase beta (chloroplast) [Nicotiana... 302 e-104
dbj|BAC77573.1| RNA polymerase beta' subunit, partial (chloropla... 302 e-103
ref|WP_042855006.1| hypothetical protein [Staphylococcus aureus] 300 e-103
gb|ALI91113.1| RpoC1, partial (chloroplast) [Cassinopsis madagas... 299 e-102
gb|ABU85440.1| RNA polymerase beta subunit, partial (chloroplast... 317 e-102
ref|YP_004769938.1| RNA polymerase beta (chloroplast) [Wolffia a... 316 e-102
ref|YP_004769803.1| RNA polymerase beta (chloroplast) [Wolffiell... 316 e-102
gb|KJB30917.1| hypothetical protein B456_005G1677001, partial [G... 306 e-102
gb|ACB29310.1| RNA polymerase beta' subunit, partial (chloroplas... 297 e-102
>gb|AMO44331.1| RNA polymerase beta largest subunit, partial (chloroplast) [Panax
ginseng]
gb|AMO44333.1| RNA polymerase beta largest subunit, partial (chloroplast) [Panax
ginseng]
Length = 151
Score = 308 bits (789), Expect = e-106
Identities = 144/151 (95%), Positives = 145/151 (96%)
Frame = -3
Query: 453 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 274
MNQNF SMIDRYKHQQLRIG VSPQQI WANKILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGSVSPQQISTWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 273 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 94
GLFCERIFGPIKSGICACGNYRVIG EKEDPKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGNEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 93 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 1
THVWYLKRLPSYIANLLDKPLKELEGLVYCD
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 151
>gb|ANQ46316.1| rpoC1 (chloroplast) [Pogostemon cablin]
Length = 152
Score = 308 bits (788), Expect = e-106
Identities = 144/151 (95%), Positives = 145/151 (96%)
Frame = -3
Query: 453 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 274
MN NFYSMID YKHQQLRIGLVSPQQI AWA KILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNPNFYSMIDWYKHQQLRIGLVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 273 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 94
GLFCERIFGPIKSGICACGNYRVIG EKEDPKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 93 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 1
THVWYLKRLPSYIANLLDKPLKELEGLVYCD
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 151
>gb|AON75821.1| RNA polymerase beta' subunit (chloroplast) [Populus adenopoda]
gb|AQM54413.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
tomentosa]
Length = 152
Score = 307 bits (787), Expect = e-106
Identities = 142/151 (94%), Positives = 146/151 (96%)
Frame = -3
Query: 453 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 274
MNQNF+SMIDRYKHQQLRIG VSPQQI AW NKILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFFSMIDRYKHQQLRIGSVSPQQISAWTNKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 273 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 94
GLFCERIFGPIKSGICACGNYRVIG EKE+PKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGDEKEEPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 93 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 1
THVWYLKRLPSYIANLLDKPLK+LEGLVYCD
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKQLEGLVYCD 151
>gb|AII18578.1| RNA polymerase beta subunit (chloroplast) [Viburnum amplificatum]
Length = 152
Score = 307 bits (786), Expect = e-105
Identities = 143/151 (94%), Positives = 144/151 (95%)
Frame = -3
Query: 453 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 274
MNQNF SMIDRYKHQQLRIG VSPQQI WANKILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGSVSPQQISTWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 273 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 94
GLFCERIFGPIKSGIC CGNYRVIG EKEDPKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICTCGNYRVIGEEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 93 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 1
THVWYLKRLPSYIANLLDKPLKELEGLVYCD
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 151
>gb|AII18577.1| RNA polymerase beta subunit (chloroplast) [Viburnum acerifolium]
gb|AII18579.1| RNA polymerase beta subunit (chloroplast) [Viburnum carlesii]
gb|AII18580.1| RNA polymerase beta subunit (chloroplast) [Viburnum cassinoides]
gb|AII18581.1| RNA polymerase beta subunit (chloroplast) [Viburnum clemensae]
gb|AII18582.1| RNA polymerase beta subunit (chloroplast) [Viburnum cylindricum]
gb|AII18583.1| RNA polymerase beta subunit (chloroplast) [Viburnum dentatum]
gb|AII18584.1| RNA polymerase beta subunit (chloroplast) [Viburnum dilatatum]
gb|AII18585.1| RNA polymerase beta subunit (chloroplast) [Viburnum erubescens]
gb|AII18586.1| RNA polymerase beta subunit (chloroplast) [Viburnum grandiflorum]
gb|AII18587.1| RNA polymerase beta subunit (chloroplast) [Viburnum lantanoides]
gb|AII18588.1| RNA polymerase beta subunit (chloroplast) [Viburnum lentago]
gb|AII18589.1| RNA polymerase beta subunit (chloroplast) [Viburnum lutescens]
gb|AII18590.1| RNA polymerase beta subunit (chloroplast) [Viburnum molle]
gb|AII18591.1| RNA polymerase beta subunit (chloroplast) [Viburnum opulus]
gb|AII18592.1| RNA polymerase beta subunit (chloroplast) [Viburnum plicatum]
gb|AII18593.1| RNA polymerase beta subunit (chloroplast) [Viburnum punctatum]
gb|AII18594.1| RNA polymerase beta subunit (chloroplast) [Viburnum sieboldii]
gb|AII18595.1| RNA polymerase beta subunit (chloroplast) [Viburnum taiwanianum]
gb|AII18596.1| RNA polymerase beta subunit (chloroplast) [Viburnum tinus]
gb|AII18597.1| RNA polymerase beta subunit (chloroplast) [Viburnum triphyllum]
gb|AII18598.1| RNA polymerase beta subunit (chloroplast) [Viburnum vernicosum]
Length = 152
Score = 306 bits (785), Expect = e-105
Identities = 143/151 (94%), Positives = 144/151 (95%)
Frame = -3
Query: 453 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 274
MNQNF SMIDRYKHQQLRIG VSPQQI WANKILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGSVSPQQISTWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 273 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 94
GLFCERIFGPIKSGIC CGNYRVIG EKEDPKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICTCGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 93 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 1
THVWYLKRLPSYIANLLDKPLKELEGLVYCD
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 151
>ref|YP_009049675.1| hypothetical protein (mitochondrion) [Capsicum annuum]
ref|YP_009049784.1| hypothetical protein (mitochondrion) [Capsicum annuum]
gb|AIG89836.1| hypothetical protein (mitochondrion) [Capsicum annuum]
gb|AIG90033.1| hypothetical protein (mitochondrion) [Capsicum annuum]
gb|AIG90142.1| hypothetical protein (mitochondrion) [Capsicum annuum]
Length = 152
Score = 306 bits (783), Expect = e-105
Identities = 143/151 (94%), Positives = 145/151 (96%)
Frame = -3
Query: 453 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 274
MN+NF SMIDRYKHQQLRIG VSPQQI AWA KILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNKNFSSMIDRYKHQQLRIGSVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 273 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 94
GLFCERIFGPIKSGICACGNYRVIG EKEDPKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 93 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 1
THVWYLKRLPSYIANLLDKPLKELEGLVYCD
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 151
>dbj|BAC77550.1| RNA polymerase beta' subunit, partial (chloroplast) [Nicotiana
sylvestris]
Length = 150
Score = 305 bits (782), Expect = e-105
Identities = 143/150 (95%), Positives = 144/150 (96%)
Frame = -3
Query: 453 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 274
MN NF SMIDRYKHQQLRIGLVSPQQI AWA KILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNNNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 273 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 94
GLFCERIFGPIKSGICACGNYRVIG EKEDPKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 93 THVWYLKRLPSYIANLLDKPLKELEGLVYC 4
THVWYLKRLPSYIANLLDKPLKELEGLVYC
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYC 150
>gb|AON75811.1| RNA polymerase beta' subunit (chloroplast) [Populus lasiocarpa]
gb|AON75813.1| RNA polymerase beta' subunit (chloroplast) [Populus tremuloides]
gb|AON75815.1| RNA polymerase beta' subunit (chloroplast) [Populus tremula]
gb|AON75817.1| RNA polymerase beta' subunit (chloroplast) [Populus davidiana]
gb|AON75819.1| RNA polymerase beta' subunit (chloroplast) [Populus euphratica]
gb|AON75823.1| RNA polymerase beta' subunit (chloroplast) [Salix arbutifolia]
gb|AON75825.1| RNA polymerase beta' subunit (chloroplast) [Salix triandra]
gb|AON75827.1| RNA polymerase beta' subunit (chloroplast) [Populus grandidentata]
gb|AON75829.1| RNA polymerase beta' subunit (chloroplast) [Populus hopeiensis]
gb|AQM54375.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
trichocarpa]
gb|AQM54377.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
heterophylla]
gb|AQM54379.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
ilicifolia]
gb|AQM54381.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
deltoides]
gb|AQM54383.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus nigra]
gb|AQM54385.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
pruinosa]
gb|AQM54387.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
balsamifera]
gb|AQM54389.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
angustifolia]
gb|AQM54391.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
mexicana]
gb|AQM54393.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
fremontii]
gb|AQM54395.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
wilsonii]
gb|AQM54397.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
pamirica]
gb|AQM54399.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
szechuanica]
gb|AQM54401.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
suaveolens]
gb|AQM54403.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
laurifolia]
gb|AQM54405.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
przewalskii]
gb|AQM54409.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
simonii]
gb|AQM54411.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
talassica]
gb|AQM54415.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
afghanica]
gb|AQM54417.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus alba]
Length = 152
Score = 305 bits (782), Expect = e-105
Identities = 142/151 (94%), Positives = 145/151 (96%)
Frame = -3
Query: 453 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 274
MNQNF SMIDRYKHQQLRIG VSPQQI AW NKILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGSVSPQQISAWTNKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 273 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 94
GLFCERIFGPIKSGICACGNYRVIG EKE+PKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGDEKEEPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 93 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 1
THVWYLKRLPSYIANLLDKPLK+LEGLVYCD
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKQLEGLVYCD 151
>gb|AJO25103.1| RNA polymerase beta (chloroplast) [Solanum lycopersicum]
gb|ALN11564.1| RNA polymerase beta (chloroplast) [Iochroma edule]
gb|AMX21679.1| RNA polymerase beta (chloroplast) [Iochroma parvifolium]
gb|PHT61089.1| hypothetical protein T459_35062 [Capsicum annuum]
gb|PHT87510.1| hypothetical protein T459_09616 [Capsicum annuum]
Length = 152
Score = 305 bits (782), Expect = e-105
Identities = 143/151 (94%), Positives = 144/151 (95%)
Frame = -3
Query: 453 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 274
MN NF SMIDRYKHQQLRIG VSPQQI AWA KILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNNNFSSMIDRYKHQQLRIGSVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 273 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 94
GLFCERIFGPIKSGICACGNYRVIG EKEDPKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 93 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 1
THVWYLKRLPSYIANLLDKPLKELEGLVYCD
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 151
>ref|WP_082924808.1| hypothetical protein [Paenarthrobacter nicotinovorans]
Length = 152
Score = 305 bits (780), Expect = e-104
Identities = 142/151 (94%), Positives = 144/151 (95%)
Frame = -3
Query: 453 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 274
MN NF SMIDRYKHQQLRIG VSPQQI AWA KILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNHNFSSMIDRYKHQQLRIGSVSPQQISAWAKKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 273 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 94
GLFCERIFGPIKSGICACGNYRVIG EKEDPKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 93 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 1
THVWYLKRLPSYIAN+LDKPLKELEGLVYCD
Sbjct: 121 THVWYLKRLPSYIANILDKPLKELEGLVYCD 151
>gb|AQM54407.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
ussuriensis]
Length = 152
Score = 303 bits (776), Expect = e-104
Identities = 141/151 (93%), Positives = 144/151 (95%)
Frame = -3
Query: 453 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 274
MNQNF SMIDRYKHQQLRIG VSPQQI AW NKILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGSVSPQQISAWTNKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 273 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 94
GLFCERIFGPIKSGICACGNYRVIG EKE+PKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGEEKEEPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 93 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 1
THVWYLKRLPSYIANLLDKP K+LEGLVYCD
Sbjct: 121 THVWYLKRLPSYIANLLDKPPKQLEGLVYCD 151
>ref|YP_009336368.1| RNA polymerase beta (chloroplast) [Nicotiana otophora]
gb|ALT14463.1| RNA polymerase beta (chloroplast) [Nicotiana otophora]
Length = 155
Score = 302 bits (774), Expect = e-104
Identities = 142/151 (94%), Positives = 143/151 (94%)
Frame = -3
Query: 453 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 274
MN NF SMIDRYKHQQLRIG VSPQQI AWA KILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNNNFSSMIDRYKHQQLRIGSVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 273 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 94
GLFCERIFGPIKSGICACGNYRVI EKEDPKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIEDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 93 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 1
THVWYLKRLPSYIANLLDKPLKELEGLVYCD
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 151
>dbj|BAC77573.1| RNA polymerase beta' subunit, partial (chloroplast) [Nicotiana
tomentosiformis]
Length = 149
Score = 302 bits (773), Expect = e-103
Identities = 142/149 (95%), Positives = 143/149 (95%)
Frame = -3
Query: 453 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 274
MN NF SMIDRYKHQQLRIGLVSPQQI AWA KILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNNNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 273 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 94
GLFCERIFGPIKSGICACGNYRVIG EKEDPKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 93 THVWYLKRLPSYIANLLDKPLKELEGLVY 7
THVWYLKRLPSYIANLLDKPLKELEGLVY
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVY 149
>ref|WP_042855006.1| hypothetical protein [Staphylococcus aureus]
Length = 152
Score = 300 bits (769), Expect = e-103
Identities = 140/151 (92%), Positives = 143/151 (94%)
Frame = -3
Query: 453 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 274
MNQNF SMIDRYKHQQLRIG VSPQQI AWA KILPNGE VGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGSVSPQQISAWAKKILPNGETVGEVTKPYTFHYKTNKPEKD 60
Query: 273 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 94
GLFCERIFGPIKSGICACGNYRVIG +KE PKFCE+CGV FVDSRIRRYQMGYI+LACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGNQKEGPKFCEQCGVEFVDSRIRRYQMGYIRLACPV 120
Query: 93 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 1
THVWYLKRLPSYIANLLDKPLKELEGLVYCD
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 151
>gb|ALI91113.1| RpoC1, partial (chloroplast) [Cassinopsis madagascariensis]
Length = 147
Score = 299 bits (766), Expect = e-102
Identities = 140/147 (95%), Positives = 142/147 (96%)
Frame = -3
Query: 453 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 274
MNQNF SMIDRYKHQQLRIG VSPQQI AWANKILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGSVSPQQISAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 273 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 94
GLFCERIFGPIKSGICACGNYRVIG EKEDPKFCE+CGV F+DSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFIDSRIRRYQMGYIKLACPV 120
Query: 93 THVWYLKRLPSYIANLLDKPLKELEGL 13
THVWYLKRLPSYIANLLDKPLKELEGL
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGL 147
>gb|ABU85440.1| RNA polymerase beta subunit, partial (chloroplast) [Musa acuminata]
Length = 695
Score = 317 bits (811), Expect = e-102
Identities = 148/151 (98%), Positives = 149/151 (98%)
Frame = -3
Query: 453 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 274
MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 273 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 94
GLFCERI GPIKSGICACGNYRVIGAEKEDPKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERISGPIKSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 93 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 1
THVWYLKRLPSYIANLLDKPLKELEGLVYCD
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 151
>ref|YP_004769938.1| RNA polymerase beta (chloroplast) [Wolffia australiana]
gb|AEK94499.1| RNA polymerase beta (chloroplast) [Wolffia australiana]
Length = 690
Score = 316 bits (809), Expect = e-102
Identities = 145/151 (96%), Positives = 149/151 (98%)
Frame = -3
Query: 453 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 274
MNQNFYSMIDRYKHQQLRIGLVSP+QI AWANKILPNGE+VGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFYSMIDRYKHQQLRIGLVSPEQISAWANKILPNGEVVGEVTKPYTFHYKTNKPEKD 60
Query: 273 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 94
GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCE+CGV FVDSR+RRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRVRRYQMGYIKLACPV 120
Query: 93 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 1
THVWYLKRLPSYIANLLDKPLKELEGLVYCD
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 151
>ref|YP_004769803.1| RNA polymerase beta (chloroplast) [Wolffiella lingulata]
gb|AEK94416.1| RNA polymerase beta (chloroplast) [Wolffiella lingulata]
Length = 690
Score = 316 bits (809), Expect = e-102
Identities = 145/151 (96%), Positives = 149/151 (98%)
Frame = -3
Query: 453 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 274
MNQNFYSMIDRYKHQQLRIGLVSP+QI AWANKILPNGE+VGEVTKPYTFHYKTNKPEKD
Sbjct: 1 MNQNFYSMIDRYKHQQLRIGLVSPEQISAWANKILPNGEVVGEVTKPYTFHYKTNKPEKD 60
Query: 273 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 94
GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCE+CGV FVDSR+RRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRVRRYQMGYIKLACPV 120
Query: 93 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 1
THVWYLKRLPSYIANLLDKPLKELEGLVYCD
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 151
>gb|KJB30917.1| hypothetical protein B456_005G1677001, partial [Gossypium
raimondii]
Length = 370
Score = 306 bits (783), Expect = e-102
Identities = 144/156 (92%), Positives = 147/156 (94%)
Frame = -3
Query: 468 GSLI*MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTN 289
GSLI MNQNF SMIDRYKHQQLRIG VSPQQI AWA KILPNGE VGEVTKPYTFHYKTN
Sbjct: 214 GSLIGMNQNFSSMIDRYKHQQLRIGSVSPQQISAWAKKILPNGETVGEVTKPYTFHYKTN 273
Query: 288 KPEKDGLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIK 109
KPEKDGLFCERIFGPIKSGICACGNYRVIG +KE PKFCE+CGV FVDSRIRRYQMGYI+
Sbjct: 274 KPEKDGLFCERIFGPIKSGICACGNYRVIGNQKEGPKFCEQCGVEFVDSRIRRYQMGYIR 333
Query: 108 LACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCD 1
LACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCD
Sbjct: 334 LACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCD 369
>gb|ACB29310.1| RNA polymerase beta' subunit, partial (chloroplast) [Acicarpha
spathulata]
gb|AIJ03320.1| RNA polymerase beta subunit, partial (chloroplast) [Calycera
crassifolia]
gb|AIJ03321.1| RNA polymerase beta subunit, partial (chloroplast) [Gamocarpha
alpina]
gb|AIJ03325.1| RNA polymerase beta subunit, partial (chloroplast) [Nastanthus
caespitosus]
Length = 144
Score = 297 bits (761), Expect = e-102
Identities = 138/144 (95%), Positives = 140/144 (97%)
Frame = -3
Query: 432 MIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERI 253
MIDRYKHQQLRIGLVSPQQI WANKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERI
Sbjct: 1 MIDRYKHQQLRIGLVSPQQISTWANKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERI 60
Query: 252 FGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPVTHVWYLK 73
FGPIKSGICACGNYRVIG EKEDP+FCE+CGV FVDSRIRRYQMGYIKLACPVTHVWYLK
Sbjct: 61 FGPIKSGICACGNYRVIGDEKEDPQFCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLK 120
Query: 72 RLPSYIANLLDKPLKELEGLVYCD 1
RLPSYIANLLDKPLKELEGLVYCD
Sbjct: 121 RLPSYIANLLDKPLKELEGLVYCD 144