BLASTX nr result

ID: Ophiopogon25_contig00010270 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00010270
         (502 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006659896.2| PREDICTED: CRS2-associated factor 2, mitocho...    55   8e-06
ref|XP_008371279.1| PREDICTED: CRS2-associated factor 2, mitocho...    55   9e-06

>ref|XP_006659896.2| PREDICTED: CRS2-associated factor 2, mitochondrial, partial [Oryza
           brachyantha]
          Length = 239

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/36 (72%), Positives = 30/36 (83%), Gaps = 4/36 (11%)
 Frame = -2

Query: 501 KLRDMVPCVPLLFKDDQIIIWRGME----SDTSQCS 406
           KLRD+VPCVPLLFKD+QII+WRG E    S +SQCS
Sbjct: 200 KLRDLVPCVPLLFKDEQIILWRGKENQEKSVSSQCS 235


>ref|XP_008371279.1| PREDICTED: CRS2-associated factor 2, mitochondrial [Malus
           domestica]
          Length = 368

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = -2

Query: 501 KLRDMVPCVPLLFKDDQIIIWRGMESDTSQCSPCADDTGFS 379
           KLRD+VPC+PLLFKD+QII+WRG + D  Q S C D +  S
Sbjct: 326 KLRDLVPCIPLLFKDEQIILWRG-KRDQRQDSECTDSSKMS 365


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