BLASTX nr result

ID: Ophiopogon25_contig00010082 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00010082
         (738 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020257506.1| X-linked retinitis pigmentosa GTPase regulat...   126   2e-32
ref|XP_020269762.1| uncharacterized protein LOC109844989 [Aspara...    77   4e-13

>ref|XP_020257506.1| X-linked retinitis pigmentosa GTPase regulator-interacting protein
           1-like [Asparagus officinalis]
 ref|XP_020257507.1| X-linked retinitis pigmentosa GTPase regulator-interacting protein
           1-like [Asparagus officinalis]
 gb|ONK75676.1| uncharacterized protein A4U43_C03F19380 [Asparagus officinalis]
          Length = 178

 Score =  126 bits (316), Expect = 2e-32
 Identities = 72/161 (44%), Positives = 93/161 (57%)
 Frame = -2

Query: 737 DRTFFDLSVRAWGEKKPKGVDSRLEGSVKGADKKSPLFKKPKTMAAEEXXXXXXXXXXXX 558
           DR FFDLSVRAWGEKKP+  + ++E    G  +     ++ +    EE            
Sbjct: 46  DRAFFDLSVRAWGEKKPREAEPKVENRDDGDQQVE---EEEQEEGEEEEKENYDDYDPGD 102

Query: 557 XXXXXXXXXXXXXXXXXXXXXXXXXSFKYVTDQATKYWGREGLSLATLELGLKHMDRTKA 378
                                     FKY+TDQ TKY+ REGLSLA LELGLKHMDR+KA
Sbjct: 103 S-------------------------FKYLTDQMTKYFKREGLSLAMLELGLKHMDRSKA 137

Query: 377 ASLEKRWRQHFEAELRIDAKSFDVNRDLLAALVAGHRGVNS 255
           A+LEK+WR+HF+ EL+I+A+  D+ R+LL ALVAG +G NS
Sbjct: 138 AALEKKWREHFQEELKIEAEYCDLKRELLDALVAGQKGANS 178


>ref|XP_020269762.1| uncharacterized protein LOC109844989 [Asparagus officinalis]
 gb|ONK67042.1| uncharacterized protein A4U43_C06F15050 [Asparagus officinalis]
          Length = 256

 Score = 77.0 bits (188), Expect = 4e-13
 Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 2/157 (1%)
 Frame = -2

Query: 737 DRTFFDLSVRAWGEKKPKGVDSRLEGSVKGADKKSPLFKKPKT--MAAEEXXXXXXXXXX 564
           DR FFDLS RAW +K+  G   +         KK+   KK  T  +              
Sbjct: 101 DRAFFDLSARAW-DKEEAGTKKK---------KKTTETKKAVTDVVTNAADAGDDADDVH 150

Query: 563 XXXXXXXXXXXXXXXXXXXXXXXXXXXSFKYVTDQATKYWGREGLSLATLELGLKHMDRT 384
                                       F Y++ QA KYW + GL +ATLE+GLK +DR+
Sbjct: 151 DGDEEEDENEEEVEEDDEEENEDVADGYFMYLSGQARKYWEQLGLPIATLEVGLKFLDRS 210

Query: 383 KAASLEKRWRQHFEAELRIDAKSFDVNRDLLAALVAG 273
           KAA+LEK+W  HFE  L+I+A+S ++  ++ + L+ G
Sbjct: 211 KAAALEKKWMAHFEEGLKIEAQSHELYLEICSTLLGG 247


Top