BLASTX nr result

ID: Ophiopogon25_contig00008860 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00008860
         (699 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK81731.1| uncharacterized protein A4U43_C01F32310 [Asparagu...   201   1e-70
ref|XP_020251625.1| chloroplastic group IIA intron splicing faci...   201   1e-70
ref|XP_009418129.1| PREDICTED: chloroplastic group IIA intron sp...   190   4e-61
ref|XP_009418130.1| PREDICTED: chloroplastic group IIA intron sp...   190   4e-61
gb|PKA65289.1| Chloroplastic group IIA intron splicing facilitat...   189   6e-61
gb|OVA04958.1| RNA-binding [Macleaya cordata]                         184   9e-60
gb|KMZ75641.1| Chloroplastic group IIA intron splicing facilitat...   181   1e-57
ref|XP_010270810.1| PREDICTED: chloroplastic group IIA intron sp...   179   3e-56
ref|XP_020705251.1| chloroplastic group IIA intron splicing faci...   181   4e-56
gb|PIA33367.1| hypothetical protein AQUCO_04100055v1 [Aquilegia ...   177   5e-56
ref|XP_020094505.1| chloroplastic group IIA intron splicing faci...   181   7e-56
ref|XP_020521623.1| chloroplastic group IIA intron splicing faci...   185   9e-56
ref|XP_020521625.1| chloroplastic group IIA intron splicing faci...   185   9e-56
ref|XP_020521626.1| chloroplastic group IIA intron splicing faci...   185   9e-56
gb|ERN04039.1| hypothetical protein AMTR_s00079p00185530 [Ambore...   185   9e-56
ref|XP_020521627.1| chloroplastic group IIA intron splicing faci...   185   9e-56
ref|XP_020521628.1| chloroplastic group IIA intron splicing faci...   185   9e-56
gb|AAG00596.1|AF290415_1 CRS1, partial [Zea mays]                     187   3e-55
ref|XP_019419000.1| PREDICTED: chloroplastic group IIA intron sp...   179   8e-55
ref|XP_021862664.1| chloroplastic group IIA intron splicing faci...   178   1e-54

>gb|ONK81731.1| uncharacterized protein A4U43_C01F32310 [Asparagus officinalis]
          Length = 709

 Score =  201 bits (510), Expect(2) = 1e-70
 Identities = 96/115 (83%), Positives = 103/115 (89%)
 Frame = -1

Query: 699 RLLDGLGPRFIDWWWRTPLPVDADLLPEVVPEFKPPFRLCPPHERPKLGDVELTYLRKLA 520
           RLLD LGPRF+DWW++ PLPVDADLLPEVVP FKPPFRLCPP ERPKL D ELTYLRK+A
Sbjct: 291 RLLDSLGPRFVDWWYKKPLPVDADLLPEVVPGFKPPFRLCPPEERPKLRDDELTYLRKIA 350

Query: 519 RPLPTHFALGKNTKLQGVAAAIIKPWEKSPIAKIAIKVGILHTNNKQMAVELKKL 355
           RPLPTHFALGKNTKLQG+AAAIIK WEK  IAKIAIKVGI HTNN+QM  ELK+L
Sbjct: 351 RPLPTHFALGKNTKLQGLAAAIIKLWEKCLIAKIAIKVGIPHTNNQQMGQELKRL 405



 Score = 94.7 bits (234), Expect(2) = 1e-70
 Identities = 51/94 (54%), Positives = 62/94 (65%)
 Frame = -2

Query: 341 LTGGVLILRNKFFIILYRGKDFIPGKVANPVHXXXXXXXXXXXXXXXXXXXXXXXXESLN 162
           LTGGVLILRNKF+IILYRGKDF+PGKVA+ VH                        +S+N
Sbjct: 405 LTGGVLILRNKFYIILYRGKDFLPGKVASSVHEREIELHDQQLLEEEARAKAIAAFDSIN 464

Query: 161 PIDESVCSTSNIGTFSEFKDIQANYLPLNNGTST 60
              ES+  T+ +GTFSEFK+IQANYLPLN+ TS+
Sbjct: 465 ---ESIQGTTKVGTFSEFKEIQANYLPLNSVTSS 495


>ref|XP_020251625.1| chloroplastic group IIA intron splicing facilitator CRS1,
           chloroplastic [Asparagus officinalis]
          Length = 607

 Score =  201 bits (510), Expect(2) = 1e-70
 Identities = 96/115 (83%), Positives = 103/115 (89%)
 Frame = -1

Query: 699 RLLDGLGPRFIDWWWRTPLPVDADLLPEVVPEFKPPFRLCPPHERPKLGDVELTYLRKLA 520
           RLLD LGPRF+DWW++ PLPVDADLLPEVVP FKPPFRLCPP ERPKL D ELTYLRK+A
Sbjct: 189 RLLDSLGPRFVDWWYKKPLPVDADLLPEVVPGFKPPFRLCPPEERPKLRDDELTYLRKIA 248

Query: 519 RPLPTHFALGKNTKLQGVAAAIIKPWEKSPIAKIAIKVGILHTNNKQMAVELKKL 355
           RPLPTHFALGKNTKLQG+AAAIIK WEK  IAKIAIKVGI HTNN+QM  ELK+L
Sbjct: 249 RPLPTHFALGKNTKLQGLAAAIIKLWEKCLIAKIAIKVGIPHTNNQQMGQELKRL 303



 Score = 94.7 bits (234), Expect(2) = 1e-70
 Identities = 51/94 (54%), Positives = 62/94 (65%)
 Frame = -2

Query: 341 LTGGVLILRNKFFIILYRGKDFIPGKVANPVHXXXXXXXXXXXXXXXXXXXXXXXXESLN 162
           LTGGVLILRNKF+IILYRGKDF+PGKVA+ VH                        +S+N
Sbjct: 303 LTGGVLILRNKFYIILYRGKDFLPGKVASSVHEREIELHDQQLLEEEARAKAIAAFDSIN 362

Query: 161 PIDESVCSTSNIGTFSEFKDIQANYLPLNNGTST 60
              ES+  T+ +GTFSEFK+IQANYLPLN+ TS+
Sbjct: 363 ---ESIQGTTKVGTFSEFKEIQANYLPLNSVTSS 393


>ref|XP_009418129.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic isoform X1 [Musa acuminata subsp.
           malaccensis]
          Length = 769

 Score =  190 bits (483), Expect(2) = 4e-61
 Identities = 89/115 (77%), Positives = 102/115 (88%)
 Frame = -1

Query: 699 RLLDGLGPRFIDWWWRTPLPVDADLLPEVVPEFKPPFRLCPPHERPKLGDVELTYLRKLA 520
           RLLDGLGPRF+DWWW+ PLPVDADLLPEVVP F+PP R+CPP  RPKL D EL YLRKLA
Sbjct: 367 RLLDGLGPRFVDWWWQKPLPVDADLLPEVVPGFRPPLRMCPPGVRPKLTDDELMYLRKLA 426

Query: 519 RPLPTHFALGKNTKLQGVAAAIIKPWEKSPIAKIAIKVGILHTNNKQMAVELKKL 355
           RPLPTHFALG+N KLQG+AA+I K WEKS IAKIA+KVGI +TNN+QM++ELK+L
Sbjct: 427 RPLPTHFALGRNRKLQGLAASIRKLWEKSLIAKIAVKVGIQNTNNEQMSLELKRL 481



 Score = 73.6 bits (179), Expect(2) = 4e-61
 Identities = 42/90 (46%), Positives = 52/90 (57%)
 Frame = -2

Query: 341 LTGGVLILRNKFFIILYRGKDFIPGKVANPVHXXXXXXXXXXXXXXXXXXXXXXXXESLN 162
           LTGGVLILRNKFFIILYRGKDF+PG V N +                          SL 
Sbjct: 481 LTGGVLILRNKFFIILYRGKDFLPGGVTNLI---DEREAELNEQQLEEEKARTGFTNSLR 537

Query: 161 PIDESVCSTSNIGTFSEFKDIQANYLPLNN 72
            +D  + S S +GT+ EF++IQAN++ LNN
Sbjct: 538 AMDNILPSFSIVGTYMEFQEIQANHISLNN 567


>ref|XP_009418130.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic isoform X2 [Musa acuminata subsp.
           malaccensis]
          Length = 768

 Score =  190 bits (483), Expect(2) = 4e-61
 Identities = 89/115 (77%), Positives = 102/115 (88%)
 Frame = -1

Query: 699 RLLDGLGPRFIDWWWRTPLPVDADLLPEVVPEFKPPFRLCPPHERPKLGDVELTYLRKLA 520
           RLLDGLGPRF+DWWW+ PLPVDADLLPEVVP F+PP R+CPP  RPKL D EL YLRKLA
Sbjct: 366 RLLDGLGPRFVDWWWQKPLPVDADLLPEVVPGFRPPLRMCPPGVRPKLTDDELMYLRKLA 425

Query: 519 RPLPTHFALGKNTKLQGVAAAIIKPWEKSPIAKIAIKVGILHTNNKQMAVELKKL 355
           RPLPTHFALG+N KLQG+AA+I K WEKS IAKIA+KVGI +TNN+QM++ELK+L
Sbjct: 426 RPLPTHFALGRNRKLQGLAASIRKLWEKSLIAKIAVKVGIQNTNNEQMSLELKRL 480



 Score = 73.6 bits (179), Expect(2) = 4e-61
 Identities = 42/90 (46%), Positives = 52/90 (57%)
 Frame = -2

Query: 341 LTGGVLILRNKFFIILYRGKDFIPGKVANPVHXXXXXXXXXXXXXXXXXXXXXXXXESLN 162
           LTGGVLILRNKFFIILYRGKDF+PG V N +                          SL 
Sbjct: 480 LTGGVLILRNKFFIILYRGKDFLPGGVTNLI---DEREAELNEQQLEEEKARTGFTNSLR 536

Query: 161 PIDESVCSTSNIGTFSEFKDIQANYLPLNN 72
            +D  + S S +GT+ EF++IQAN++ LNN
Sbjct: 537 AMDNILPSFSIVGTYMEFQEIQANHISLNN 566


>gb|PKA65289.1| Chloroplastic group IIA intron splicing facilitator CRS1,
           chloroplastic [Apostasia shenzhenica]
          Length = 737

 Score =  189 bits (481), Expect(2) = 6e-61
 Identities = 92/115 (80%), Positives = 99/115 (86%)
 Frame = -1

Query: 699 RLLDGLGPRFIDWWWRTPLPVDADLLPEVVPEFKPPFRLCPPHERPKLGDVELTYLRKLA 520
           RLL+GLGPRFIDWWWR PLPVDADLLPE+VP F  PFRLCPP  R  L D ELTYLRKLA
Sbjct: 316 RLLEGLGPRFIDWWWRKPLPVDADLLPEIVPGFMTPFRLCPPDVRSNLSDDELTYLRKLA 375

Query: 519 RPLPTHFALGKNTKLQGVAAAIIKPWEKSPIAKIAIKVGILHTNNKQMAVELKKL 355
           RPLPTHFAL KN KL GVA+AIIK WEKS IAKIAIKVGI +TNN+QMA+ELK+L
Sbjct: 376 RPLPTHFALSKNKKLHGVASAIIKLWEKSLIAKIAIKVGIPNTNNEQMALELKRL 430



 Score = 73.6 bits (179), Expect(2) = 6e-61
 Identities = 44/90 (48%), Positives = 52/90 (57%)
 Frame = -2

Query: 341 LTGGVLILRNKFFIILYRGKDFIPGKVANPVHXXXXXXXXXXXXXXXXXXXXXXXXESLN 162
           LTGGVLILRNKFFIIL+RGKDF+PG+VA+ V                         ES  
Sbjct: 430 LTGGVLILRNKFFIILFRGKDFLPGRVASSV---LEREAQVTDQQQLEEECRLRAAESFP 486

Query: 161 PIDESVCSTSNIGTFSEFKDIQANYLPLNN 72
                V S S IGT +EF+DIQA YLP+N+
Sbjct: 487 EKQTLVTSASTIGTLTEFEDIQAKYLPVNS 516


>gb|OVA04958.1| RNA-binding [Macleaya cordata]
          Length = 647

 Score =  184 bits (467), Expect(2) = 9e-60
 Identities = 87/115 (75%), Positives = 97/115 (84%)
 Frame = -1

Query: 699 RLLDGLGPRFIDWWWRTPLPVDADLLPEVVPEFKPPFRLCPPHERPKLGDVELTYLRKLA 520
           RLLDGLGPRFIDWWW  PLPVDADLLPEV+P F PP R CPP  R +L D ELTY RKLA
Sbjct: 244 RLLDGLGPRFIDWWWPKPLPVDADLLPEVIPGFTPPIRRCPPRVRSQLADEELTYFRKLA 303

Query: 519 RPLPTHFALGKNTKLQGVAAAIIKPWEKSPIAKIAIKVGILHTNNKQMAVELKKL 355
           RPLPTHFALG+NT+LQG+AAAIIK WEKS I KIA+K G+ +TNN+QMA ELK+L
Sbjct: 304 RPLPTHFALGRNTRLQGLAAAIIKLWEKSLIVKIAVKWGVPNTNNEQMAWELKRL 358



 Score = 75.1 bits (183), Expect(2) = 9e-60
 Identities = 45/92 (48%), Positives = 53/92 (57%)
 Frame = -2

Query: 341 LTGGVLILRNKFFIILYRGKDFIPGKVANPVHXXXXXXXXXXXXXXXXXXXXXXXXESLN 162
           LTGGVLILRNKFFII YRGKDFIP +VA+ +                         ES +
Sbjct: 358 LTGGVLILRNKFFIIFYRGKDFIPPRVASLI---VNRETELKRCQLEEESARWKAVESFH 414

Query: 161 PIDESVCSTSNIGTFSEFKDIQANYLPLNNGT 66
             DE+V S S IGTFS+F+DIQ  Y   NNG+
Sbjct: 415 VTDETVASISTIGTFSDFRDIQTKYGLWNNGS 446


>gb|KMZ75641.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Zostera
           marina]
          Length = 736

 Score =  181 bits (459), Expect(2) = 1e-57
 Identities = 89/115 (77%), Positives = 97/115 (84%)
 Frame = -1

Query: 699 RLLDGLGPRFIDWWWRTPLPVDADLLPEVVPEFKPPFRLCPPHERPKLGDVELTYLRKLA 520
           RLLDGLGPRFIDWWW  PLPVDADLLPE+VP F+PP R CP   + KL D ELTYLRKLA
Sbjct: 323 RLLDGLGPRFIDWWWPKPLPVDADLLPEIVPNFRPPSRRCPHDTKIKLTDDELTYLRKLA 382

Query: 519 RPLPTHFALGKNTKLQGVAAAIIKPWEKSPIAKIAIKVGILHTNNKQMAVELKKL 355
           RPLPTHFALGKNTKLQG+A+AIIK W KS IAKIAIK GIL TNN+ M+ ELK+L
Sbjct: 383 RPLPTHFALGKNTKLQGLASAIIKLWAKSHIAKIAIKRGILCTNNEVMSSELKRL 437



 Score = 71.2 bits (173), Expect(2) = 1e-57
 Identities = 38/84 (45%), Positives = 47/84 (55%)
 Frame = -2

Query: 341 LTGGVLILRNKFFIILYRGKDFIPGKVANPVHXXXXXXXXXXXXXXXXXXXXXXXXESLN 162
           LTGG+LILRNK+ IILYRGKDF+P  VA  +H                         + +
Sbjct: 437 LTGGILILRNKYIIILYRGKDFLPNGVAELIHQREDQLENLQSYEEQARENAIKFFHTTS 496

Query: 161 PIDESVCSTSNIGTFSEFKDIQAN 90
             DE  C+T NIGTF+EFKD+Q N
Sbjct: 497 --DEMQCTTRNIGTFAEFKDLQTN 518


>ref|XP_010270810.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Nelumbo nucifera]
 ref|XP_010270811.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Nelumbo nucifera]
          Length = 801

 Score =  179 bits (453), Expect(2) = 3e-56
 Identities = 87/115 (75%), Positives = 99/115 (86%)
 Frame = -1

Query: 699 RLLDGLGPRFIDWWWRTPLPVDADLLPEVVPEFKPPFRLCPPHERPKLGDVELTYLRKLA 520
           RLLDGLGPRFIDWW + PLPVDADLLPEVVP+F+PPFRLCPP+ R KL D ELTYLR LA
Sbjct: 381 RLLDGLGPRFIDWWRQKPLPVDADLLPEVVPDFRPPFRLCPPNVRSKLTDDELTYLRSLA 440

Query: 519 RPLPTHFALGKNTKLQGVAAAIIKPWEKSPIAKIAIKVGILHTNNKQMAVELKKL 355
           R LPTHFALG+N KLQG+AAAI+K WEK+ I KIA+K GI +T+N+QMA ELK L
Sbjct: 441 RHLPTHFALGRNKKLQGLAAAILKLWEKNIIVKIAVKWGIPNTDNEQMAWELKHL 495



 Score = 68.6 bits (166), Expect(2) = 3e-56
 Identities = 42/82 (51%), Positives = 49/82 (59%)
 Frame = -2

Query: 341 LTGGVLILRNKFFIILYRGKDFIPGKVANPVHXXXXXXXXXXXXXXXXXXXXXXXXESLN 162
           LTGGVLILRNKF IILYRGKDF+P  VAN +                         ES +
Sbjct: 495 LTGGVLILRNKFLIILYRGKDFLPCGVANLI---VEREMELSRFQLQEEGARFKAIESFH 551

Query: 161 PIDESVCSTSNIGTFSEFKDIQ 96
            +DE++ STS IGTFSEF+DIQ
Sbjct: 552 ILDETLTSTSAIGTFSEFQDIQ 573


>ref|XP_020705251.1| chloroplastic group IIA intron splicing facilitator CRS1,
           chloroplastic [Dendrobium catenatum]
 gb|PKU66813.1| Chloroplastic group IIA intron splicing facilitator CRS1,
           chloroplastic [Dendrobium catenatum]
          Length = 763

 Score =  181 bits (458), Expect(2) = 4e-56
 Identities = 88/115 (76%), Positives = 99/115 (86%)
 Frame = -1

Query: 699 RLLDGLGPRFIDWWWRTPLPVDADLLPEVVPEFKPPFRLCPPHERPKLGDVELTYLRKLA 520
           RLLDGLGPRFIDWW R PLPVDADLLPE+VP F  PFR CPP+E  +L + +LTYLRKLA
Sbjct: 342 RLLDGLGPRFIDWWRRKPLPVDADLLPEIVPGFMTPFRRCPPYEGKRLSNDDLTYLRKLA 401

Query: 519 RPLPTHFALGKNTKLQGVAAAIIKPWEKSPIAKIAIKVGILHTNNKQMAVELKKL 355
           RPLPTHFAL KNTKLQG+A AI+K WEKS IAKIAIKVGI +TN++QMA ELK+L
Sbjct: 402 RPLPTHFALSKNTKLQGLACAIMKLWEKSLIAKIAIKVGIQNTNSEQMAWELKRL 456



 Score = 66.2 bits (160), Expect(2) = 4e-56
 Identities = 39/90 (43%), Positives = 50/90 (55%)
 Frame = -2

Query: 341 LTGGVLILRNKFFIILYRGKDFIPGKVANPVHXXXXXXXXXXXXXXXXXXXXXXXXESLN 162
           LTGGVLILRNKF IIL+RGKDF+P +VA  V                         ES +
Sbjct: 456 LTGGVLILRNKFLIILFRGKDFLPSRVAGSV---LEREAHVEVQQLLEEKARSKAAESFH 512

Query: 161 PIDESVCSTSNIGTFSEFKDIQANYLPLNN 72
                  +TS++GT+ EF+DI+ NY+P NN
Sbjct: 513 VTIMLETATSSLGTYREFQDIRTNYIPRNN 542


>gb|PIA33367.1| hypothetical protein AQUCO_04100055v1 [Aquilegia coerulea]
          Length = 716

 Score =  177 bits (449), Expect(2) = 5e-56
 Identities = 87/115 (75%), Positives = 96/115 (83%)
 Frame = -1

Query: 699 RLLDGLGPRFIDWWWRTPLPVDADLLPEVVPEFKPPFRLCPPHERPKLGDVELTYLRKLA 520
           RLLDGLGPRF+DWW   PLPVDAD+LPEVVP FK P R CPP+ R KL D ELTYLRKLA
Sbjct: 305 RLLDGLGPRFVDWWRPKPLPVDADMLPEVVPGFKTPLRRCPPNVRLKLADDELTYLRKLA 364

Query: 519 RPLPTHFALGKNTKLQGVAAAIIKPWEKSPIAKIAIKVGILHTNNKQMAVELKKL 355
           RPLPTHFALG+NTKLQG+AAAII  WEKS I KIA+K GI +TN++QMA ELK L
Sbjct: 365 RPLPTHFALGRNTKLQGLAAAIITLWEKSLIVKIAVKFGIPNTNSEQMACELKHL 419



 Score = 69.3 bits (168), Expect(2) = 5e-56
 Identities = 42/90 (46%), Positives = 51/90 (56%)
 Frame = -2

Query: 341 LTGGVLILRNKFFIILYRGKDFIPGKVANPVHXXXXXXXXXXXXXXXXXXXXXXXXESLN 162
           LTGGVL+LRNKF+II+YRGKDF+P +VAN V                          S +
Sbjct: 419 LTGGVLLLRNKFYIIIYRGKDFLPVEVANLV---VDRETELQRCQLLEEGARWNAIGSSS 475

Query: 161 PIDESVCSTSNIGTFSEFKDIQANYLPLNN 72
            I+ESV +T   GTF EF+DIQ  Y  LNN
Sbjct: 476 VINESVSATIPSGTFLEFRDIQTKYGHLNN 505


>ref|XP_020094505.1| chloroplastic group IIA intron splicing facilitator CRS1,
           chloroplastic [Ananas comosus]
          Length = 661

 Score =  181 bits (460), Expect(2) = 7e-56
 Identities = 87/115 (75%), Positives = 98/115 (85%)
 Frame = -1

Query: 699 RLLDGLGPRFIDWWWRTPLPVDADLLPEVVPEFKPPFRLCPPHERPKLGDVELTYLRKLA 520
           RLLDGLGPRFIDWWW+ PLPVDADLLPEVVP+F+  FR CPP  RP+L D ELTYLR LA
Sbjct: 243 RLLDGLGPRFIDWWWKKPLPVDADLLPEVVPDFRTLFRQCPPGVRPQLRDNELTYLRMLA 302

Query: 519 RPLPTHFALGKNTKLQGVAAAIIKPWEKSPIAKIAIKVGILHTNNKQMAVELKKL 355
           RPLPTHFALGKN  L+G+AAAI+K WEKS +AKIA+KVGI  TNN+ MA ELK+L
Sbjct: 303 RPLPTHFALGKNKGLEGLAAAILKLWEKSLVAKIAVKVGIPDTNNELMACELKRL 357



 Score = 64.7 bits (156), Expect(2) = 7e-56
 Identities = 35/86 (40%), Positives = 49/86 (56%)
 Frame = -2

Query: 341 LTGGVLILRNKFFIILYRGKDFIPGKVANPVHXXXXXXXXXXXXXXXXXXXXXXXXESLN 162
           LTGGVLILRNKFFIILYRGKDF+PG+VA+ +                          +  
Sbjct: 357 LTGGVLILRNKFFIILYRGKDFLPGRVADSI---IERETVLYDQQLAEEEARSKAAATFQ 413

Query: 161 PIDESVCSTSNIGTFSEFKDIQANYL 84
            +D  + +  +IGTF E+++IQ N++
Sbjct: 414 LVDGLLSNPCSIGTFREYQEIQVNHI 439


>ref|XP_020521623.1| chloroplastic group IIA intron splicing facilitator CRS1,
           chloroplastic isoform X1 [Amborella trichopoda]
          Length = 919

 Score =  185 bits (470), Expect(2) = 9e-56
 Identities = 89/115 (77%), Positives = 98/115 (85%)
 Frame = -1

Query: 699 RLLDGLGPRFIDWWWRTPLPVDADLLPEVVPEFKPPFRLCPPHERPKLGDVELTYLRKLA 520
           RLLD LGPRFIDWWW TPLPVDADLLPEV+P F+PP RLCPPH + KL D ELTYLRK A
Sbjct: 509 RLLDELGPRFIDWWWSTPLPVDADLLPEVIPNFRPPLRLCPPHMQSKLTDEELTYLRKFA 568

Query: 519 RPLPTHFALGKNTKLQGVAAAIIKPWEKSPIAKIAIKVGILHTNNKQMAVELKKL 355
           + LPTHFALGKNTKLQG+AAAI+K WEKS IAKIAIK GI + N++QMA ELK L
Sbjct: 569 KHLPTHFALGKNTKLQGLAAAILKLWEKSLIAKIAIKWGIPNVNHQQMAYELKHL 623



 Score = 60.5 bits (145), Expect(2) = 9e-56
 Identities = 37/89 (41%), Positives = 49/89 (55%)
 Frame = -2

Query: 341 LTGGVLILRNKFFIILYRGKDFIPGKVANPVHXXXXXXXXXXXXXXXXXXXXXXXXESLN 162
           LTGGVL+L+NKFFI+LYRGKDF+P  VAN +                           L+
Sbjct: 623 LTGGVLLLQNKFFILLYRGKDFLPPGVANSI--AERETTLKTLQIHEENARSIAATGFLS 680

Query: 161 PIDESVCSTSNIGTFSEFKDIQANYLPLN 75
           P DE+  +TS  GT S+F++IQ +  P N
Sbjct: 681 P-DETQPTTSRTGTLSDFQEIQEHSHPFN 708


>ref|XP_020521625.1| chloroplastic group IIA intron splicing facilitator CRS1,
           chloroplastic isoform X2 [Amborella trichopoda]
          Length = 915

 Score =  185 bits (470), Expect(2) = 9e-56
 Identities = 89/115 (77%), Positives = 98/115 (85%)
 Frame = -1

Query: 699 RLLDGLGPRFIDWWWRTPLPVDADLLPEVVPEFKPPFRLCPPHERPKLGDVELTYLRKLA 520
           RLLD LGPRFIDWWW TPLPVDADLLPEV+P F+PP RLCPPH + KL D ELTYLRK A
Sbjct: 509 RLLDELGPRFIDWWWSTPLPVDADLLPEVIPNFRPPLRLCPPHMQSKLTDEELTYLRKFA 568

Query: 519 RPLPTHFALGKNTKLQGVAAAIIKPWEKSPIAKIAIKVGILHTNNKQMAVELKKL 355
           + LPTHFALGKNTKLQG+AAAI+K WEKS IAKIAIK GI + N++QMA ELK L
Sbjct: 569 KHLPTHFALGKNTKLQGLAAAILKLWEKSLIAKIAIKWGIPNVNHQQMAYELKHL 623



 Score = 60.5 bits (145), Expect(2) = 9e-56
 Identities = 37/89 (41%), Positives = 49/89 (55%)
 Frame = -2

Query: 341 LTGGVLILRNKFFIILYRGKDFIPGKVANPVHXXXXXXXXXXXXXXXXXXXXXXXXESLN 162
           LTGGVL+L+NKFFI+LYRGKDF+P  VAN +                           L+
Sbjct: 623 LTGGVLLLQNKFFILLYRGKDFLPPGVANSI--AERETTLKTLQIHEENARSIAATGFLS 680

Query: 161 PIDESVCSTSNIGTFSEFKDIQANYLPLN 75
           P DE+  +TS  GT S+F++IQ +  P N
Sbjct: 681 P-DETQPTTSRTGTLSDFQEIQEHSHPFN 708


>ref|XP_020521626.1| chloroplastic group IIA intron splicing facilitator CRS1,
           chloroplastic isoform X3 [Amborella trichopoda]
          Length = 914

 Score =  185 bits (470), Expect(2) = 9e-56
 Identities = 89/115 (77%), Positives = 98/115 (85%)
 Frame = -1

Query: 699 RLLDGLGPRFIDWWWRTPLPVDADLLPEVVPEFKPPFRLCPPHERPKLGDVELTYLRKLA 520
           RLLD LGPRFIDWWW TPLPVDADLLPEV+P F+PP RLCPPH + KL D ELTYLRK A
Sbjct: 504 RLLDELGPRFIDWWWSTPLPVDADLLPEVIPNFRPPLRLCPPHMQSKLTDEELTYLRKFA 563

Query: 519 RPLPTHFALGKNTKLQGVAAAIIKPWEKSPIAKIAIKVGILHTNNKQMAVELKKL 355
           + LPTHFALGKNTKLQG+AAAI+K WEKS IAKIAIK GI + N++QMA ELK L
Sbjct: 564 KHLPTHFALGKNTKLQGLAAAILKLWEKSLIAKIAIKWGIPNVNHQQMAYELKHL 618



 Score = 60.5 bits (145), Expect(2) = 9e-56
 Identities = 37/89 (41%), Positives = 49/89 (55%)
 Frame = -2

Query: 341 LTGGVLILRNKFFIILYRGKDFIPGKVANPVHXXXXXXXXXXXXXXXXXXXXXXXXESLN 162
           LTGGVL+L+NKFFI+LYRGKDF+P  VAN +                           L+
Sbjct: 618 LTGGVLLLQNKFFILLYRGKDFLPPGVANSI--AERETTLKTLQIHEENARSIAATGFLS 675

Query: 161 PIDESVCSTSNIGTFSEFKDIQANYLPLN 75
           P DE+  +TS  GT S+F++IQ +  P N
Sbjct: 676 P-DETQPTTSRTGTLSDFQEIQEHSHPFN 703


>gb|ERN04039.1| hypothetical protein AMTR_s00079p00185530 [Amborella trichopoda]
          Length = 886

 Score =  185 bits (470), Expect(2) = 9e-56
 Identities = 89/115 (77%), Positives = 98/115 (85%)
 Frame = -1

Query: 699 RLLDGLGPRFIDWWWRTPLPVDADLLPEVVPEFKPPFRLCPPHERPKLGDVELTYLRKLA 520
           RLLD LGPRFIDWWW TPLPVDADLLPEV+P F+PP RLCPPH + KL D ELTYLRK A
Sbjct: 476 RLLDELGPRFIDWWWSTPLPVDADLLPEVIPNFRPPLRLCPPHMQSKLTDEELTYLRKFA 535

Query: 519 RPLPTHFALGKNTKLQGVAAAIIKPWEKSPIAKIAIKVGILHTNNKQMAVELKKL 355
           + LPTHFALGKNTKLQG+AAAI+K WEKS IAKIAIK GI + N++QMA ELK L
Sbjct: 536 KHLPTHFALGKNTKLQGLAAAILKLWEKSLIAKIAIKWGIPNVNHQQMAYELKHL 590



 Score = 60.5 bits (145), Expect(2) = 9e-56
 Identities = 37/89 (41%), Positives = 49/89 (55%)
 Frame = -2

Query: 341 LTGGVLILRNKFFIILYRGKDFIPGKVANPVHXXXXXXXXXXXXXXXXXXXXXXXXESLN 162
           LTGGVL+L+NKFFI+LYRGKDF+P  VAN +                           L+
Sbjct: 590 LTGGVLLLQNKFFILLYRGKDFLPPGVANSI--AERETTLKTLQIHEENARSIAATGFLS 647

Query: 161 PIDESVCSTSNIGTFSEFKDIQANYLPLN 75
           P DE+  +TS  GT S+F++IQ +  P N
Sbjct: 648 P-DETQPTTSRTGTLSDFQEIQEHSHPFN 675


>ref|XP_020521627.1| chloroplastic group IIA intron splicing facilitator CRS1,
           chloroplastic isoform X4 [Amborella trichopoda]
          Length = 848

 Score =  185 bits (470), Expect(2) = 9e-56
 Identities = 89/115 (77%), Positives = 98/115 (85%)
 Frame = -1

Query: 699 RLLDGLGPRFIDWWWRTPLPVDADLLPEVVPEFKPPFRLCPPHERPKLGDVELTYLRKLA 520
           RLLD LGPRFIDWWW TPLPVDADLLPEV+P F+PP RLCPPH + KL D ELTYLRK A
Sbjct: 438 RLLDELGPRFIDWWWSTPLPVDADLLPEVIPNFRPPLRLCPPHMQSKLTDEELTYLRKFA 497

Query: 519 RPLPTHFALGKNTKLQGVAAAIIKPWEKSPIAKIAIKVGILHTNNKQMAVELKKL 355
           + LPTHFALGKNTKLQG+AAAI+K WEKS IAKIAIK GI + N++QMA ELK L
Sbjct: 498 KHLPTHFALGKNTKLQGLAAAILKLWEKSLIAKIAIKWGIPNVNHQQMAYELKHL 552



 Score = 60.5 bits (145), Expect(2) = 9e-56
 Identities = 37/89 (41%), Positives = 49/89 (55%)
 Frame = -2

Query: 341 LTGGVLILRNKFFIILYRGKDFIPGKVANPVHXXXXXXXXXXXXXXXXXXXXXXXXESLN 162
           LTGGVL+L+NKFFI+LYRGKDF+P  VAN +                           L+
Sbjct: 552 LTGGVLLLQNKFFILLYRGKDFLPPGVANSI--AERETTLKTLQIHEENARSIAATGFLS 609

Query: 161 PIDESVCSTSNIGTFSEFKDIQANYLPLN 75
           P DE+  +TS  GT S+F++IQ +  P N
Sbjct: 610 P-DETQPTTSRTGTLSDFQEIQEHSHPFN 637


>ref|XP_020521628.1| chloroplastic group IIA intron splicing facilitator CRS1,
           chloroplastic isoform X5 [Amborella trichopoda]
 ref|XP_020521629.1| chloroplastic group IIA intron splicing facilitator CRS1,
           chloroplastic isoform X5 [Amborella trichopoda]
          Length = 844

 Score =  185 bits (470), Expect(2) = 9e-56
 Identities = 89/115 (77%), Positives = 98/115 (85%)
 Frame = -1

Query: 699 RLLDGLGPRFIDWWWRTPLPVDADLLPEVVPEFKPPFRLCPPHERPKLGDVELTYLRKLA 520
           RLLD LGPRFIDWWW TPLPVDADLLPEV+P F+PP RLCPPH + KL D ELTYLRK A
Sbjct: 434 RLLDELGPRFIDWWWSTPLPVDADLLPEVIPNFRPPLRLCPPHMQSKLTDEELTYLRKFA 493

Query: 519 RPLPTHFALGKNTKLQGVAAAIIKPWEKSPIAKIAIKVGILHTNNKQMAVELKKL 355
           + LPTHFALGKNTKLQG+AAAI+K WEKS IAKIAIK GI + N++QMA ELK L
Sbjct: 494 KHLPTHFALGKNTKLQGLAAAILKLWEKSLIAKIAIKWGIPNVNHQQMAYELKHL 548



 Score = 60.5 bits (145), Expect(2) = 9e-56
 Identities = 37/89 (41%), Positives = 49/89 (55%)
 Frame = -2

Query: 341 LTGGVLILRNKFFIILYRGKDFIPGKVANPVHXXXXXXXXXXXXXXXXXXXXXXXXESLN 162
           LTGGVL+L+NKFFI+LYRGKDF+P  VAN +                           L+
Sbjct: 548 LTGGVLLLQNKFFILLYRGKDFLPPGVANSI--AERETTLKTLQIHEENARSIAATGFLS 605

Query: 161 PIDESVCSTSNIGTFSEFKDIQANYLPLN 75
           P DE+  +TS  GT S+F++IQ +  P N
Sbjct: 606 P-DETQPTTSRTGTLSDFQEIQEHSHPFN 633


>gb|AAG00596.1|AF290415_1 CRS1, partial [Zea mays]
          Length = 267

 Score =  187 bits (474), Expect = 3e-55
 Identities = 97/163 (59%), Positives = 114/163 (69%), Gaps = 27/163 (16%)
 Frame = -1

Query: 699 RLLDGLGPRFIDWWWRTPLPVDADLLPEVVPEFKPPFRLCPPHERPKLGDVELTYLRKLA 520
           RLLD LGPRF+DWWW TPLPVDADLLPE VP FK P+RLCPP  RP L D ELTYLRKLA
Sbjct: 105 RLLDTLGPRFVDWWWDTPLPVDADLLPEFVPGFKTPYRLCPPGVRPTLADEELTYLRKLA 164

Query: 519 RPLPTHFALGKNTKLQGVAAAIIKPWEKSPIAKIAIKVGILHTNNKQMAVELK------- 361
           R LPTHFALG+NT+LQG+AAAI+K WEKS IAKIA+K+GI +TNN+QMA  LK       
Sbjct: 165 RLLPTHFALGRNTRLQGLAAAILKLWEKSLIAKIAVKIGIQNTNNEQMAWNLKGKAYIGL 224

Query: 360 --------------------KLMNAASHRRSIDIKKQVLYHTL 292
                               KL++AAS+ R   I+KQ  Y+++
Sbjct: 225 SLTQSTESVLLLFVFSCVTLKLLSAASYGRHCYIEKQGFYYSI 267


>ref|XP_019419000.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Lupinus angustifolius]
          Length = 765

 Score =  179 bits (455), Expect(2) = 8e-55
 Identities = 86/115 (74%), Positives = 96/115 (83%)
 Frame = -1

Query: 699 RLLDGLGPRFIDWWWRTPLPVDADLLPEVVPEFKPPFRLCPPHERPKLGDVELTYLRKLA 520
           RLLDGLGPRFIDWW   PLPVDADLLPEVVP FKPPFRLCPP+E  KL D ELTYLRKLA
Sbjct: 349 RLLDGLGPRFIDWWMHKPLPVDADLLPEVVPGFKPPFRLCPPYESVKLADSELTYLRKLA 408

Query: 519 RPLPTHFALGKNTKLQGVAAAIIKPWEKSPIAKIAIKVGILHTNNKQMAVELKKL 355
            PLPTHF LG+N  LQG+A +I+K WEKS IAKIAIK G+ +T+N+ MA ELK+L
Sbjct: 409 HPLPTHFVLGRNRGLQGLATSILKLWEKSLIAKIAIKYGVPNTDNETMAEELKRL 463



 Score = 63.2 bits (152), Expect(2) = 8e-55
 Identities = 37/82 (45%), Positives = 46/82 (56%)
 Frame = -2

Query: 341 LTGGVLILRNKFFIILYRGKDFIPGKVANPVHXXXXXXXXXXXXXXXXXXXXXXXXESLN 162
           LTGG+L+LRNKF+I+LYRGKDF+P KVA  V                         ES++
Sbjct: 463 LTGGILLLRNKFYILLYRGKDFLPKKVAALVEERELELKSCQFHEETARTRAIEAIESIS 522

Query: 161 PIDESVCSTSNIGTFSEFKDIQ 96
            I E    TS  GTF+EFK+IQ
Sbjct: 523 SIAELPQETSISGTFTEFKNIQ 544


>ref|XP_021862664.1| chloroplastic group IIA intron splicing facilitator CRS1,
           chloroplastic [Spinacia oleracea]
          Length = 807

 Score =  178 bits (452), Expect(2) = 1e-54
 Identities = 84/115 (73%), Positives = 96/115 (83%)
 Frame = -1

Query: 699 RLLDGLGPRFIDWWWRTPLPVDADLLPEVVPEFKPPFRLCPPHERPKLGDVELTYLRKLA 520
           RLLDGLGPRF+DWW+  PLPVD DLLPEVVP FKPPFRLCPP  RP+L D ELTYLRKLA
Sbjct: 398 RLLDGLGPRFVDWWYPKPLPVDGDLLPEVVPGFKPPFRLCPPRVRPQLMDDELTYLRKLA 457

Query: 519 RPLPTHFALGKNTKLQGVAAAIIKPWEKSPIAKIAIKVGILHTNNKQMAVELKKL 355
           RPLP HF LG+N+KLQG+A AI+K WEKS  AKIA+K G+ +TNN+ M+ ELK L
Sbjct: 458 RPLPVHFVLGRNSKLQGLAVAILKLWEKSVFAKIAVKWGVPNTNNEFMSSELKHL 512



 Score = 63.9 bits (154), Expect(2) = 1e-54
 Identities = 38/82 (46%), Positives = 45/82 (54%)
 Frame = -2

Query: 341 LTGGVLILRNKFFIILYRGKDFIPGKVANPVHXXXXXXXXXXXXXXXXXXXXXXXXESLN 162
           LTGGVL+LRNKFFI+LYRGKDF+PG VAN V                           L+
Sbjct: 512 LTGGVLLLRNKFFIVLYRGKDFLPGNVANAV---IEREIELHQWQLHEEDARLKASGVLD 568

Query: 161 PIDESVCSTSNIGTFSEFKDIQ 96
             DE+    S +GTFSEF+ IQ
Sbjct: 569 FNDETSADRSIVGTFSEFQHIQ 590


Top