BLASTX nr result
ID: Ophiopogon25_contig00008560
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00008560
(1265 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020259819.1| RNA-binding protein 42-like [Asparagus offic... 116 4e-27
gb|OEL28470.1| RNA-binding protein 42 [Dichanthelium oligosanthes] 117 5e-27
ref|XP_002454192.1| RNA-binding protein 42 [Sorghum bicolor] >gi... 117 6e-27
gb|ONK70735.1| uncharacterized protein A4U43_C04F990 [Asparagus ... 116 9e-27
ref|XP_004953144.1| RNA-binding protein 42 [Setaria italica] 115 3e-26
gb|PAN07124.1| hypothetical protein PAHAL_A02593, partial [Panic... 117 3e-26
ref|XP_003575388.1| PREDICTED: RNA-binding protein 42-like [Brac... 115 4e-26
ref|XP_020084833.1| RNA-binding protein 42-like isoform X2 [Anan... 115 9e-26
dbj|BAF09383.1| Os02g0622500, partial [Oryza sativa Japonica Group] 111 1e-25
ref|XP_020158346.1| RNA-binding protein 42-like [Aegilops tausch... 114 1e-25
ref|XP_020084831.1| RNA-binding protein 42-like isoform X1 [Anan... 115 1e-25
gb|EXB93170.1| RNA-binding protein 42 [Morus notabilis] 109 2e-25
ref|XP_008802148.1| PREDICTED: RNA-binding protein 42-like [Phoe... 114 2e-25
gb|AQK53710.1| RNA-binding (RRM/RBD/RNP motifs) family protein [... 113 2e-25
gb|EAY86741.1| hypothetical protein OsI_08123 [Oryza sativa Indi... 113 2e-25
gb|EPS60509.1| hypothetical protein M569_14292, partial [Genlise... 113 3e-25
dbj|BAK06564.1| predicted protein [Hordeum vulgare subsp. vulgare] 113 3e-25
ref|XP_019191828.1| PREDICTED: RNA-binding protein 42-like isofo... 113 4e-25
gb|KQL30554.1| hypothetical protein SETIT_017518mg [Setaria ital... 115 5e-25
gb|AQK53709.1| RNA-binding (RRM/RBD/RNP motifs) family protein [... 113 5e-25
>ref|XP_020259819.1| RNA-binding protein 42-like [Asparagus officinalis]
Length = 176
Score = 116 bits (290), Expect = 4e-27
Identities = 58/79 (73%), Positives = 64/79 (81%)
Frame = -3
Query: 486 SQVVRDKRTGKTKGYGFVSFANASDLVSALKEMNGKYVGNRPIKLRKSTWKNRVDFEALE 307
++VVRDK TGKTKGYGFVSFA++SDLVSALKEMNGKYVGNRPIKLRKSTWK R+DFEALE
Sbjct: 97 ARVVRDKNTGKTKGYGFVSFADSSDLVSALKEMNGKYVGNRPIKLRKSTWKKRIDFEALE 156
Query: 306 XXXXXXXXXXXXXKRSILH 250
KRS+LH
Sbjct: 157 KQKRQPQKKPKPVKRSVLH 175
>gb|OEL28470.1| RNA-binding protein 42 [Dichanthelium oligosanthes]
Length = 230
Score = 117 bits (294), Expect = 5e-27
Identities = 58/80 (72%), Positives = 65/80 (81%)
Frame = -3
Query: 489 ISQVVRDKRTGKTKGYGFVSFANASDLVSALKEMNGKYVGNRPIKLRKSTWKNRVDFEAL 310
+++V+RDK TGKTKGYGFVSFANASDL +ALKEMNGKYVGNRPIKLRKSTWKNR+DFEAL
Sbjct: 150 MARVIRDKWTGKTKGYGFVSFANASDLAAALKEMNGKYVGNRPIKLRKSTWKNRIDFEAL 209
Query: 309 EXXXXXXXXXXXXXKRSILH 250
E KRS+LH
Sbjct: 210 EKGKTQPQKKIKLQKRSVLH 229
>ref|XP_002454192.1| RNA-binding protein 42 [Sorghum bicolor]
gb|EES07168.1| hypothetical protein SORBI_3004G219400 [Sorghum bicolor]
Length = 242
Score = 117 bits (294), Expect = 6e-27
Identities = 58/80 (72%), Positives = 65/80 (81%)
Frame = -3
Query: 489 ISQVVRDKRTGKTKGYGFVSFANASDLVSALKEMNGKYVGNRPIKLRKSTWKNRVDFEAL 310
+++V+RDK TGKTKGYGFVSFANASDL SALKEMNGKYVGNRPIKLRKSTWKNR+DFE+L
Sbjct: 162 MARVIRDKWTGKTKGYGFVSFANASDLTSALKEMNGKYVGNRPIKLRKSTWKNRIDFESL 221
Query: 309 EXXXXXXXXXXXXXKRSILH 250
E KRS+LH
Sbjct: 222 EKGKTQPQKKIKLQKRSVLH 241
>gb|ONK70735.1| uncharacterized protein A4U43_C04F990 [Asparagus officinalis]
Length = 205
Score = 116 bits (290), Expect = 9e-27
Identities = 58/79 (73%), Positives = 64/79 (81%)
Frame = -3
Query: 486 SQVVRDKRTGKTKGYGFVSFANASDLVSALKEMNGKYVGNRPIKLRKSTWKNRVDFEALE 307
++VVRDK TGKTKGYGFVSFA++SDLVSALKEMNGKYVGNRPIKLRKSTWK R+DFEALE
Sbjct: 126 ARVVRDKNTGKTKGYGFVSFADSSDLVSALKEMNGKYVGNRPIKLRKSTWKKRIDFEALE 185
Query: 306 XXXXXXXXXXXXXKRSILH 250
KRS+LH
Sbjct: 186 KQKRQPQKKPKPVKRSVLH 204
>ref|XP_004953144.1| RNA-binding protein 42 [Setaria italica]
Length = 236
Score = 115 bits (289), Expect = 3e-26
Identities = 57/80 (71%), Positives = 65/80 (81%)
Frame = -3
Query: 489 ISQVVRDKRTGKTKGYGFVSFANASDLVSALKEMNGKYVGNRPIKLRKSTWKNRVDFEAL 310
+++V+RDK TGKTKGYGFVSFANASDL +ALKEMNGKYVGNRPIKLRKSTWK+R+DFEAL
Sbjct: 156 MARVIRDKWTGKTKGYGFVSFANASDLAAALKEMNGKYVGNRPIKLRKSTWKSRIDFEAL 215
Query: 309 EXXXXXXXXXXXXXKRSILH 250
E KRS+LH
Sbjct: 216 EKGKTRPQKKIKLQKRSVLH 235
>gb|PAN07124.1| hypothetical protein PAHAL_A02593, partial [Panicum hallii]
Length = 311
Score = 117 bits (294), Expect = 3e-26
Identities = 58/80 (72%), Positives = 65/80 (81%)
Frame = -3
Query: 489 ISQVVRDKRTGKTKGYGFVSFANASDLVSALKEMNGKYVGNRPIKLRKSTWKNRVDFEAL 310
+++V+RDK TGKTKGYGFVSFANASDL +ALKEMNGKYVGNRPIKLRKSTWKNR+DFEAL
Sbjct: 231 MARVIRDKWTGKTKGYGFVSFANASDLAAALKEMNGKYVGNRPIKLRKSTWKNRIDFEAL 290
Query: 309 EXXXXXXXXXXXXXKRSILH 250
E KRS+LH
Sbjct: 291 EKGKTQPQKKIKPQKRSVLH 310
>ref|XP_003575388.1| PREDICTED: RNA-binding protein 42-like [Brachypodium distachyon]
gb|KQK00397.1| hypothetical protein BRADI_3g49130v3 [Brachypodium distachyon]
Length = 239
Score = 115 bits (288), Expect = 4e-26
Identities = 56/80 (70%), Positives = 64/80 (80%)
Frame = -3
Query: 489 ISQVVRDKRTGKTKGYGFVSFANASDLVSALKEMNGKYVGNRPIKLRKSTWKNRVDFEAL 310
+++V+RDK TGKTKGYGFVSFANASDL +ALKEMNGKYVGNRPIKLRKSTWKNR+D+EAL
Sbjct: 159 MARVIRDKSTGKTKGYGFVSFANASDLAAALKEMNGKYVGNRPIKLRKSTWKNRIDYEAL 218
Query: 309 EXXXXXXXXXXXXXKRSILH 250
KRS+LH
Sbjct: 219 HKLKTGPQKKLKAQKRSVLH 238
>ref|XP_020084833.1| RNA-binding protein 42-like isoform X2 [Ananas comosus]
Length = 260
Score = 115 bits (287), Expect = 9e-26
Identities = 57/79 (72%), Positives = 63/79 (79%)
Frame = -3
Query: 486 SQVVRDKRTGKTKGYGFVSFANASDLVSALKEMNGKYVGNRPIKLRKSTWKNRVDFEALE 307
++VVRDK TGKTKGYGFVSFAN SDL +ALKEMNGKY+GNRPIKLRKSTWKNR+D+EALE
Sbjct: 181 ARVVRDKWTGKTKGYGFVSFANVSDLAAALKEMNGKYIGNRPIKLRKSTWKNRIDYEALE 240
Query: 306 XXXXXXXXXXXXXKRSILH 250
KRSILH
Sbjct: 241 RQKTDPRKRTKQQKRSILH 259
>dbj|BAF09383.1| Os02g0622500, partial [Oryza sativa Japonica Group]
Length = 137
Score = 111 bits (277), Expect = 1e-25
Identities = 54/80 (67%), Positives = 64/80 (80%)
Frame = -3
Query: 489 ISQVVRDKRTGKTKGYGFVSFANASDLVSALKEMNGKYVGNRPIKLRKSTWKNRVDFEAL 310
+++V+RDK TGKT+GY FVSFANASDL +ALKEMNGKYVGNRPIKLRKSTWKNR+D+EAL
Sbjct: 57 MARVIRDKWTGKTRGYAFVSFANASDLAAALKEMNGKYVGNRPIKLRKSTWKNRIDYEAL 116
Query: 309 EXXXXXXXXXXXXXKRSILH 250
+ K+SILH
Sbjct: 117 QKPKTQPQKKFKAQKKSILH 136
>ref|XP_020158346.1| RNA-binding protein 42-like [Aegilops tauschii subsp. tauschii]
Length = 236
Score = 114 bits (285), Expect = 1e-25
Identities = 55/80 (68%), Positives = 63/80 (78%)
Frame = -3
Query: 489 ISQVVRDKRTGKTKGYGFVSFANASDLVSALKEMNGKYVGNRPIKLRKSTWKNRVDFEAL 310
+++V+RDK TGKTKGYGFVSFANASDL +ALKEMNGKYVGNRPIKLRKSTWKNR+D+EAL
Sbjct: 156 MAKVIRDKSTGKTKGYGFVSFANASDLAAALKEMNGKYVGNRPIKLRKSTWKNRIDYEAL 215
Query: 309 EXXXXXXXXXXXXXKRSILH 250
RS+LH
Sbjct: 216 LKPKTRPQKKLKVQPRSVLH 235
>ref|XP_020084831.1| RNA-binding protein 42-like isoform X1 [Ananas comosus]
ref|XP_020084832.1| RNA-binding protein 42-like isoform X1 [Ananas comosus]
Length = 270
Score = 115 bits (287), Expect = 1e-25
Identities = 57/79 (72%), Positives = 63/79 (79%)
Frame = -3
Query: 486 SQVVRDKRTGKTKGYGFVSFANASDLVSALKEMNGKYVGNRPIKLRKSTWKNRVDFEALE 307
++VVRDK TGKTKGYGFVSFAN SDL +ALKEMNGKY+GNRPIKLRKSTWKNR+D+EALE
Sbjct: 191 ARVVRDKWTGKTKGYGFVSFANVSDLAAALKEMNGKYIGNRPIKLRKSTWKNRIDYEALE 250
Query: 306 XXXXXXXXXXXXXKRSILH 250
KRSILH
Sbjct: 251 RQKTDPRKRTKQQKRSILH 269
>gb|EXB93170.1| RNA-binding protein 42 [Morus notabilis]
Length = 95
Score = 109 bits (272), Expect = 2e-25
Identities = 55/77 (71%), Positives = 58/77 (75%)
Frame = -3
Query: 480 VVRDKRTGKTKGYGFVSFANASDLVSALKEMNGKYVGNRPIKLRKSTWKNRVDFEALEXX 301
VVRDKRTGKTKGYGFVSFAN SDL +ALKEMN KYVGNRPIKLRKS WK R DFEALE
Sbjct: 18 VVRDKRTGKTKGYGFVSFANPSDLAAALKEMNSKYVGNRPIKLRKSNWKERTDFEALERH 77
Query: 300 XXXXXXXXXXXKRSILH 250
K+S+LH
Sbjct: 78 KNQSQKRPKLFKKSVLH 94
>ref|XP_008802148.1| PREDICTED: RNA-binding protein 42-like [Phoenix dactylifera]
Length = 243
Score = 114 bits (284), Expect = 2e-25
Identities = 55/80 (68%), Positives = 65/80 (81%)
Frame = -3
Query: 489 ISQVVRDKRTGKTKGYGFVSFANASDLVSALKEMNGKYVGNRPIKLRKSTWKNRVDFEAL 310
+++VVRDKRTGKTKGYGFVSF+NASDL +ALKEMNGKYVGNRPIKLRKSTWK+R+D+EA+
Sbjct: 163 MARVVRDKRTGKTKGYGFVSFSNASDLTAALKEMNGKYVGNRPIKLRKSTWKDRIDYEAM 222
Query: 309 EXXXXXXXXXXXXXKRSILH 250
E K+ ILH
Sbjct: 223 EKQKTQAPKKPKLPKKGILH 242
>gb|AQK53710.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Zea mays]
Length = 231
Score = 113 bits (283), Expect = 2e-25
Identities = 56/80 (70%), Positives = 64/80 (80%)
Frame = -3
Query: 489 ISQVVRDKRTGKTKGYGFVSFANASDLVSALKEMNGKYVGNRPIKLRKSTWKNRVDFEAL 310
+++V+RDK TGKTKGYGFVSFA+ASDL SALK+MNGKYVGNRPIKLRKSTWKNR+D EAL
Sbjct: 151 MARVIRDKWTGKTKGYGFVSFADASDLTSALKDMNGKYVGNRPIKLRKSTWKNRIDLEAL 210
Query: 309 EXXXXXXXXXXXXXKRSILH 250
E KRS+LH
Sbjct: 211 EKGKTQPQKKIKLQKRSVLH 230
>gb|EAY86741.1| hypothetical protein OsI_08123 [Oryza sativa Indica Group]
Length = 234
Score = 113 bits (283), Expect = 2e-25
Identities = 55/80 (68%), Positives = 65/80 (81%)
Frame = -3
Query: 489 ISQVVRDKRTGKTKGYGFVSFANASDLVSALKEMNGKYVGNRPIKLRKSTWKNRVDFEAL 310
+++V+RDK TGKT+GYGFVSFANASDL +ALKEMNGKYVGNRPIKLRKSTWKNR+D+EAL
Sbjct: 154 MARVIRDKWTGKTRGYGFVSFANASDLAAALKEMNGKYVGNRPIKLRKSTWKNRIDYEAL 213
Query: 309 EXXXXXXXXXXXXXKRSILH 250
+ K+SILH
Sbjct: 214 QKPKTQPQKKFKAQKKSILH 233
>gb|EPS60509.1| hypothetical protein M569_14292, partial [Genlisea aurea]
Length = 248
Score = 113 bits (283), Expect = 3e-25
Identities = 57/80 (71%), Positives = 64/80 (80%)
Frame = -3
Query: 489 ISQVVRDKRTGKTKGYGFVSFANASDLVSALKEMNGKYVGNRPIKLRKSTWKNRVDFEAL 310
+++VVRDKRTGKTKGYGFVSF+NA+DLV+ALKEMNGKYVGNRPIKLRKSTWK R D EAL
Sbjct: 168 MARVVRDKRTGKTKGYGFVSFSNAADLVAALKEMNGKYVGNRPIKLRKSTWKERTDEEAL 227
Query: 309 EXXXXXXXXXXXXXKRSILH 250
E KRS+LH
Sbjct: 228 ERQKYQSHKKAKLPKRSVLH 247
>dbj|BAK06564.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 238
Score = 113 bits (282), Expect = 3e-25
Identities = 53/80 (66%), Positives = 63/80 (78%)
Frame = -3
Query: 489 ISQVVRDKRTGKTKGYGFVSFANASDLVSALKEMNGKYVGNRPIKLRKSTWKNRVDFEAL 310
+++V+RDK +GKTKGYGF SFANASDL +ALKEMNGKYVGNRPIKLRKSTWKNR+D+EAL
Sbjct: 158 MARVIRDKSSGKTKGYGFASFANASDLAAALKEMNGKYVGNRPIKLRKSTWKNRIDYEAL 217
Query: 309 EXXXXXXXXXXXXXKRSILH 250
+ RS+LH
Sbjct: 218 QKPKTRPQKKLKVQPRSVLH 237
>ref|XP_019191828.1| PREDICTED: RNA-binding protein 42-like isoform X2 [Ipomoea nil]
Length = 250
Score = 113 bits (282), Expect = 4e-25
Identities = 55/82 (67%), Positives = 65/82 (79%)
Frame = -3
Query: 495 SVISQVVRDKRTGKTKGYGFVSFANASDLVSALKEMNGKYVGNRPIKLRKSTWKNRVDFE 316
++ SQVVRDKRTGKTKGYGFVSF+N SDL +ALKEMNGKYVGNRPIKLRKS W++R+D+E
Sbjct: 168 AISSQVVRDKRTGKTKGYGFVSFSNPSDLAAALKEMNGKYVGNRPIKLRKSRWQDRIDYE 227
Query: 315 ALEXXXXXXXXXXXXXKRSILH 250
ALE K+S+LH
Sbjct: 228 ALERQKNQSQKKAKLPKKSVLH 249
>gb|KQL30554.1| hypothetical protein SETIT_017518mg [Setaria italica]
Length = 380
Score = 115 bits (289), Expect = 5e-25
Identities = 57/80 (71%), Positives = 65/80 (81%)
Frame = -3
Query: 489 ISQVVRDKRTGKTKGYGFVSFANASDLVSALKEMNGKYVGNRPIKLRKSTWKNRVDFEAL 310
+++V+RDK TGKTKGYGFVSFANASDL +ALKEMNGKYVGNRPIKLRKSTWK+R+DFEAL
Sbjct: 300 MARVIRDKWTGKTKGYGFVSFANASDLAAALKEMNGKYVGNRPIKLRKSTWKSRIDFEAL 359
Query: 309 EXXXXXXXXXXXXXKRSILH 250
E KRS+LH
Sbjct: 360 EKGKTRPQKKIKLQKRSVLH 379
>gb|AQK53709.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Zea mays]
Length = 278
Score = 113 bits (283), Expect = 5e-25
Identities = 56/80 (70%), Positives = 64/80 (80%)
Frame = -3
Query: 489 ISQVVRDKRTGKTKGYGFVSFANASDLVSALKEMNGKYVGNRPIKLRKSTWKNRVDFEAL 310
+++V+RDK TGKTKGYGFVSFA+ASDL SALK+MNGKYVGNRPIKLRKSTWKNR+D EAL
Sbjct: 198 MARVIRDKWTGKTKGYGFVSFADASDLTSALKDMNGKYVGNRPIKLRKSTWKNRIDLEAL 257
Query: 309 EXXXXXXXXXXXXXKRSILH 250
E KRS+LH
Sbjct: 258 EKGKTQPQKKIKLQKRSVLH 277